Query 048205
Match_columns 1027
No_of_seqs 917 out of 6190
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 12:38:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.2E-83 4E-88 803.1 46.8 656 3-696 51-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.7E-74 5.9E-79 720.4 44.0 610 1-662 76-744 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 7.4E-62 2.5E-66 601.3 43.4 591 29-663 7-626 (680)
4 1ziw_A TOLL-like receptor 3; i 100.0 4.2E-61 1.5E-65 594.6 44.2 597 4-639 6-626 (680)
5 3t6q_A CD180 antigen; protein- 100.0 4.7E-58 1.6E-62 559.7 41.2 544 5-663 15-564 (606)
6 3vq2_A TLR4, TOLL-like recepto 100.0 7.9E-57 2.7E-61 548.8 33.8 538 5-664 14-563 (606)
7 3t6q_A CD180 antigen; protein- 100.0 6.7E-56 2.3E-60 540.6 38.9 517 2-639 33-564 (606)
8 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-55 4.7E-60 537.9 37.6 522 2-639 32-562 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 4.6E-55 1.6E-59 550.9 41.1 539 6-664 8-565 (844)
10 3j0a_A TOLL-like receptor 5; m 100.0 2E-53 6.9E-58 535.9 36.0 542 55-685 9-563 (844)
11 2z63_A TOLL-like receptor 4, v 100.0 4.2E-51 1.4E-55 494.7 34.2 519 29-665 10-537 (570)
12 2z63_A TOLL-like receptor 4, v 100.0 1.5E-50 5.3E-55 489.8 32.9 518 4-640 9-536 (570)
13 4asz_A BDNF/NT-3 growth factor 100.0 1.3E-51 4.6E-56 448.8 16.5 254 750-1026 13-285 (299)
14 4aoj_A High affinity nerve gro 100.0 4.5E-51 1.5E-55 450.9 19.6 254 750-1026 41-315 (329)
15 3omv_A RAF proto-oncogene seri 100.0 1.1E-50 3.8E-55 441.1 21.6 257 749-1026 35-296 (307)
16 4gt4_A Tyrosine-protein kinase 100.0 7E-51 2.4E-55 445.1 18.0 254 751-1027 27-303 (308)
17 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-49 4.5E-54 479.1 30.4 473 123-664 26-515 (549)
18 2z81_A CD282 antigen, TOLL-lik 100.0 4.2E-50 1.4E-54 483.5 25.6 495 7-639 10-514 (549)
19 4fih_A Serine/threonine-protei 100.0 2.3E-50 8E-55 443.7 20.5 249 750-1023 74-323 (346)
20 4eco_A Uncharacterized protein 100.0 9.9E-51 3.4E-55 494.5 18.9 382 156-635 192-600 (636)
21 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-50 4.4E-55 438.9 15.6 248 750-1022 32-283 (311)
22 4b9d_A Serine/threonine-protei 100.0 2.6E-50 9E-55 444.0 17.2 250 749-1023 23-276 (350)
23 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-49 5.5E-54 435.8 20.4 250 750-1026 58-312 (336)
24 4fie_A Serine/threonine-protei 100.0 3.1E-49 1.1E-53 445.4 20.4 249 750-1023 151-400 (423)
25 3fpq_A Serine/threonine-protei 100.0 1.3E-48 4.5E-53 421.7 21.9 244 753-1023 29-282 (290)
26 4eco_A Uncharacterized protein 100.0 2.4E-49 8.1E-54 482.3 17.8 466 123-659 81-600 (636)
27 3hyh_A Carbon catabolite-derep 100.0 1.1E-48 3.7E-53 418.4 20.2 245 750-1023 13-262 (275)
28 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-48 4.2E-53 467.1 21.4 458 126-663 3-485 (520)
29 4ecn_A Leucine-rich repeat pro 100.0 3E-48 1E-52 479.0 25.2 489 50-659 323-864 (876)
30 2z7x_B TOLL-like receptor 1, v 100.0 1.2E-47 4.1E-52 458.6 28.5 466 29-639 3-485 (520)
31 4ase_A Vascular endothelial gr 100.0 1.4E-48 4.8E-53 434.4 18.4 264 741-1026 55-343 (353)
32 4g8a_A TOLL-like receptor 4; l 100.0 6.3E-47 2.2E-51 464.5 35.0 548 17-659 19-580 (635)
33 3hmm_A TGF-beta receptor type- 100.0 2.8E-48 9.7E-53 426.0 18.4 272 750-1026 3-293 (303)
34 3ubd_A Ribosomal protein S6 ki 100.0 1E-48 3.4E-53 424.5 12.6 247 750-1023 24-281 (304)
35 4ecn_A Leucine-rich repeat pro 100.0 1E-46 3.5E-51 465.4 28.5 489 26-635 323-864 (876)
36 4g31_A Eukaryotic translation 100.0 9.4E-47 3.2E-51 411.5 20.0 249 750-1023 5-279 (299)
37 4g8a_A TOLL-like receptor 4; l 100.0 3.1E-45 1.1E-49 449.4 35.4 537 6-636 35-581 (635)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 7.4E-45 2.5E-49 438.1 29.0 467 27-639 32-514 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.7E-45 5.8E-50 443.7 20.9 462 122-664 30-515 (562)
40 4f9c_A Cell division cycle 7-r 100.0 5.8E-45 2E-49 408.5 22.9 268 747-1023 18-352 (361)
41 4b99_A Mitogen-activated prote 100.0 9.8E-45 3.3E-49 410.8 22.2 269 749-1023 53-344 (398)
42 3uto_A Twitchin; kinase, muscl 100.0 8.2E-44 2.8E-48 423.7 22.0 252 749-1023 156-410 (573)
43 3v5w_A G-protein coupled recep 100.0 7E-44 2.4E-48 418.9 20.2 249 749-1023 188-449 (689)
44 1jl5_A Outer protein YOPM; leu 100.0 1.1E-42 3.8E-47 404.8 22.3 398 123-660 11-410 (454)
45 1jl5_A Outer protein YOPM; leu 100.0 1.1E-41 3.9E-46 396.4 25.4 425 91-664 5-434 (454)
46 2qkw_B Protein kinase; three-h 100.0 4.7E-42 1.6E-46 383.1 19.6 278 740-1026 29-311 (321)
47 3fxz_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 370.2 24.0 250 749-1023 19-269 (297)
48 3uim_A Brassinosteroid insensi 100.0 1.4E-41 4.9E-46 380.2 20.2 285 736-1027 16-308 (326)
49 3s95_A LIMK-1, LIM domain kina 100.0 6E-41 2E-45 372.2 21.1 257 749-1026 9-278 (310)
50 3v47_A TOLL-like receptor 5B a 100.0 3.5E-40 1.2E-44 387.1 28.3 380 5-427 13-410 (455)
51 3v47_A TOLL-like receptor 5B a 100.0 3.8E-40 1.3E-44 386.8 27.6 385 28-457 12-412 (455)
52 3soc_A Activin receptor type-2 100.0 4.6E-41 1.6E-45 374.9 18.3 271 749-1026 23-314 (322)
53 3fe3_A MAP/microtubule affinit 100.0 1.2E-40 4E-45 371.3 20.3 248 748-1023 13-264 (328)
54 2psq_A Fibroblast growth facto 100.0 9.3E-41 3.2E-45 379.2 19.8 255 749-1026 80-360 (370)
55 2c30_A Serine/threonine-protei 100.0 4.5E-40 1.5E-44 366.4 23.9 262 738-1024 23-295 (321)
56 3zgw_A Maternal embryonic leuc 100.0 1.2E-40 4.2E-45 373.0 18.9 250 748-1023 8-260 (347)
57 1tki_A Titin; serine kinase, m 100.0 3.4E-40 1.1E-44 367.1 22.0 252 749-1024 4-258 (321)
58 2yab_A Death-associated protei 100.0 4.7E-40 1.6E-44 370.7 23.5 251 749-1023 11-272 (361)
59 3tki_A Serine/threonine-protei 100.0 1.9E-40 6.6E-45 369.6 19.9 253 749-1023 6-261 (323)
60 3p86_A Serine/threonine-protei 100.0 1.3E-40 4.4E-45 368.5 18.3 254 748-1026 35-294 (309)
61 2nru_A Interleukin-1 receptor- 100.0 2.2E-39 7.6E-44 359.1 27.6 276 738-1026 13-302 (307)
62 3kul_A Ephrin type-A receptor 100.0 1.6E-40 5.6E-45 370.6 18.5 255 749-1026 48-309 (325)
63 1o6l_A RAC-beta serine/threoni 100.0 4.7E-40 1.6E-44 367.3 21.2 248 749-1023 4-260 (337)
64 3niz_A Rhodanese family protei 100.0 1.1E-39 3.8E-44 361.6 23.1 269 748-1023 19-300 (311)
65 3sxs_A Cytoplasmic tyrosine-pr 100.0 4E-40 1.4E-44 357.4 18.6 254 749-1027 7-261 (268)
66 3vhe_A Vascular endothelial gr 100.0 2.4E-40 8.3E-45 375.6 17.3 266 739-1026 11-351 (359)
67 3bz5_A Internalin-J, INLJ; leu 100.0 4.2E-39 1.4E-43 375.0 28.0 362 136-664 31-392 (457)
68 3cbl_A C-FES, proto-oncogene t 100.0 1E-40 3.5E-45 380.3 14.1 255 749-1026 113-370 (377)
69 4eqm_A Protein kinase; transfe 100.0 1E-39 3.6E-44 358.9 21.5 257 749-1026 10-271 (294)
70 4hcu_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 357.9 17.5 253 749-1026 9-262 (269)
71 3c0i_A Peripheral plasma membr 100.0 9E-40 3.1E-44 368.7 20.6 251 750-1023 24-286 (351)
72 3ugc_A Tyrosine-protein kinase 100.0 3.7E-40 1.3E-44 363.1 17.0 266 749-1026 9-287 (295)
73 1kob_A Twitchin; kinase, intra 100.0 1.3E-39 4.6E-44 370.3 21.2 253 749-1024 50-305 (387)
74 3soa_A Calcium/calmodulin-depe 100.0 1.8E-39 6.2E-44 375.6 22.6 254 748-1024 9-268 (444)
75 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.6E-40 1.6E-44 369.9 16.9 249 748-1023 21-280 (353)
76 2y0a_A Death-associated protei 100.0 2.7E-39 9.3E-44 360.9 22.9 251 750-1024 11-272 (326)
77 3o0g_A Cell division protein k 100.0 1.8E-39 6.1E-44 357.0 21.1 268 750-1023 2-282 (292)
78 2qol_A Ephrin receptor; recept 100.0 6.1E-40 2.1E-44 372.6 17.9 255 749-1026 44-305 (373)
79 4dc2_A Protein kinase C IOTA t 100.0 1E-39 3.5E-44 371.1 19.3 255 748-1023 50-318 (396)
80 2bdw_A Hypothetical protein K1 100.0 1.6E-39 5.6E-44 367.5 20.6 252 749-1024 28-285 (362)
81 3lb7_A RAF proto-oncogene seri 100.0 2.4E-39 8.4E-44 358.0 21.4 257 749-1026 35-296 (307)
82 4f0f_A Serine/threonine-protei 100.0 3.6E-39 1.2E-43 353.7 21.8 252 749-1027 18-286 (287)
83 4aw2_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 378.4 15.9 262 742-1023 66-338 (437)
84 3v8s_A RHO-associated protein 100.0 5E-40 1.7E-44 375.8 15.4 258 744-1024 63-330 (410)
85 1fot_A TPK1 delta, CAMP-depend 100.0 2.7E-39 9.4E-44 358.6 20.9 245 749-1023 5-258 (318)
86 1ob3_A PFPK5, cell division co 100.0 1.7E-39 5.8E-44 356.3 18.7 267 750-1023 2-280 (288)
87 3tt0_A Basic fibroblast growth 100.0 1.6E-39 5.5E-44 371.3 19.3 255 749-1026 68-348 (382)
88 3q4u_A Activin receptor type-1 100.0 4.9E-39 1.7E-43 355.3 22.5 263 749-1026 7-298 (301)
89 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.1E-39 3.9E-44 363.8 17.3 246 749-1023 8-258 (336)
90 2x4f_A Myosin light chain kina 100.0 2.6E-39 9E-44 367.2 20.5 248 753-1023 92-342 (373)
91 3l9p_A Anaplastic lymphoma kin 100.0 4.4E-40 1.5E-44 373.4 14.0 254 750-1026 71-341 (367)
92 3poz_A Epidermal growth factor 100.0 9.7E-40 3.3E-44 365.0 16.6 253 750-1026 15-274 (327)
93 4euu_A Serine/threonine-protei 100.0 5.9E-39 2E-43 357.6 22.3 270 750-1026 9-305 (319)
94 1luf_A Muscle-specific tyrosin 100.0 1.1E-39 3.7E-44 367.8 16.5 257 747-1026 44-331 (343)
95 3gen_A Tyrosine-protein kinase 100.0 1.4E-39 4.9E-44 356.1 16.7 253 749-1026 23-276 (283)
96 2izr_A Casein kinase I isoform 100.0 4.5E-39 1.5E-43 360.3 21.1 258 749-1026 8-277 (330)
97 1rjb_A FL cytokine receptor; k 100.0 2.6E-39 8.9E-44 364.7 19.3 257 748-1026 43-330 (344)
98 4fr4_A YANK1, serine/threonine 100.0 4.3E-39 1.5E-43 364.8 21.1 249 750-1023 15-271 (384)
99 1csn_A Casein kinase-1; phosph 100.0 1.9E-38 6.6E-43 349.9 25.7 259 749-1026 9-279 (298)
100 1xjd_A Protein kinase C, theta 100.0 1.2E-39 4.1E-44 365.0 16.2 250 746-1022 13-268 (345)
101 2ivs_A Proto-oncogene tyrosine 100.0 2.2E-39 7.6E-44 360.4 18.2 255 749-1026 22-307 (314)
102 2vd5_A DMPK protein; serine/th 100.0 1.2E-39 4E-44 373.0 16.4 261 742-1023 53-327 (412)
103 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-39 1.2E-43 358.5 19.4 256 749-1026 22-303 (313)
104 3a8x_A Protein kinase C IOTA t 100.0 4.3E-39 1.5E-43 361.4 20.0 253 750-1023 9-275 (345)
105 3gni_B Strad alpha; kinase fol 100.0 7.7E-39 2.6E-43 367.0 22.2 272 749-1023 24-333 (389)
106 3qup_A Tyrosine-protein kinase 100.0 2.8E-39 9.5E-44 361.1 17.9 256 748-1026 21-294 (323)
107 3kex_A Receptor tyrosine-prote 100.0 9.7E-40 3.3E-44 364.8 14.2 253 750-1026 13-272 (325)
108 3bz5_A Internalin-J, INLJ; leu 100.0 8.6E-38 2.9E-42 364.0 30.9 317 45-454 37-353 (457)
109 3op5_A Serine/threonine-protei 100.0 9.6E-39 3.3E-43 362.7 22.3 265 748-1026 33-325 (364)
110 4fvq_A Tyrosine-protein kinase 100.0 2E-39 6.8E-44 356.2 16.0 249 749-1027 7-272 (289)
111 2zv2_A Calcium/calmodulin-depe 100.0 5.2E-39 1.8E-43 354.4 19.4 249 749-1023 12-292 (298)
112 2i0e_A Protein kinase C-beta I 100.0 4.2E-39 1.4E-43 361.8 18.7 249 748-1023 18-276 (353)
113 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.3E-39 1.8E-43 361.1 19.4 245 749-1023 40-293 (350)
114 3dtc_A Mitogen-activated prote 100.0 4.3E-39 1.5E-43 349.9 18.0 250 749-1027 6-270 (271)
115 3mdy_A Bone morphogenetic prot 100.0 3.8E-38 1.3E-42 354.2 26.2 265 744-1026 31-327 (337)
116 3og7_A AKAP9-BRAF fusion prote 100.0 6.4E-39 2.2E-43 352.0 19.2 257 749-1026 23-284 (289)
117 2yex_A Serine/threonine-protei 100.0 1.3E-38 4.5E-43 347.1 21.4 253 749-1023 6-261 (276)
118 3dbq_A Dual specificity protei 100.0 4.8E-39 1.7E-43 361.9 18.2 252 749-1024 8-274 (343)
119 2w4o_A Calcium/calmodulin-depe 100.0 8.2E-39 2.8E-43 360.3 20.0 252 748-1024 51-306 (349)
120 3ork_A Serine/threonine protei 100.0 2.6E-39 8.8E-44 359.1 15.2 254 749-1023 11-273 (311)
121 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-38 4.3E-43 353.3 20.7 244 750-1023 57-304 (311)
122 1mp8_A Focal adhesion kinase 1 100.0 5.1E-39 1.7E-43 351.3 17.2 253 749-1026 14-272 (281)
123 3uc3_A Serine/threonine-protei 100.0 9.9E-39 3.4E-43 361.2 20.1 253 749-1024 19-275 (361)
124 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-38 4.2E-43 355.3 20.5 248 755-1023 16-270 (325)
125 3lxl_A Tyrosine-protein kinase 100.0 4E-39 1.4E-43 360.4 16.5 268 750-1026 23-299 (327)
126 2pmi_A Negative RE, cyclin-dep 100.0 1.3E-38 4.6E-43 354.1 20.7 268 749-1023 4-293 (317)
127 3hko_A Calcium/calmodulin-depe 100.0 1.4E-38 4.7E-43 359.0 21.0 259 746-1024 22-331 (345)
128 3t9t_A Tyrosine-protein kinase 100.0 4.1E-39 1.4E-43 349.2 16.0 253 749-1026 7-260 (267)
129 3lzb_A Epidermal growth factor 100.0 6.3E-39 2.2E-43 358.1 17.8 254 749-1026 14-274 (327)
130 3kmu_A ILK, integrin-linked ki 100.0 8.5E-39 2.9E-43 347.5 18.4 248 749-1026 9-266 (271)
131 3qd2_B Eukaryotic translation 100.0 2.1E-38 7.2E-43 355.5 22.1 251 749-1024 5-326 (332)
132 2pvf_A Fibroblast growth facto 100.0 7.1E-39 2.4E-43 359.4 18.1 255 749-1026 34-314 (334)
133 2zmd_A Dual specificity protei 100.0 1.1E-38 3.9E-43 364.5 20.1 251 750-1024 56-321 (390)
134 4e5w_A Tyrosine-protein kinase 100.0 4.4E-39 1.5E-43 355.8 16.2 265 750-1026 21-298 (302)
135 3f3z_A Calcium/calmodulin-depe 100.0 2.1E-38 7.2E-43 345.7 21.3 250 749-1023 8-261 (277)
136 3a62_A Ribosomal protein S6 ki 100.0 8.7E-39 3E-43 357.0 18.6 248 749-1023 16-276 (327)
137 2xir_A Vascular endothelial gr 100.0 7E-39 2.4E-43 356.7 17.7 265 740-1026 17-306 (316)
138 3oz6_A Mitogen-activated prote 100.0 1.8E-38 6E-43 363.8 21.4 271 747-1024 6-329 (388)
139 1k9a_A Carboxyl-terminal SRC k 100.0 1.3E-38 4.4E-43 371.3 20.3 248 748-1026 191-441 (450)
140 1qcf_A Haematopoetic cell kina 100.0 3.4E-39 1.2E-43 376.9 15.3 253 749-1027 187-441 (454)
141 2y94_A 5'-AMP-activated protei 100.0 2.3E-38 7.7E-43 368.6 21.9 247 749-1023 15-266 (476)
142 2a2a_A Death-associated protei 100.0 3.1E-38 1.1E-42 352.0 22.2 252 749-1024 11-273 (321)
143 1o6v_A Internalin A; bacterial 100.0 2.4E-37 8.3E-42 363.3 30.9 352 23-431 43-394 (466)
144 3kk8_A Calcium/calmodulin depe 100.0 3.1E-38 1.1E-42 345.7 21.6 251 749-1023 5-261 (284)
145 3g33_A Cell division protein k 100.0 3.8E-38 1.3E-42 349.3 22.1 269 748-1024 7-297 (308)
146 2r5t_A Serine/threonine-protei 100.0 6.2E-39 2.1E-43 363.0 16.0 245 749-1020 37-286 (373)
147 3n9x_A Phosphotransferase; mal 100.0 3.1E-38 1.1E-42 366.3 22.1 271 748-1023 24-361 (432)
148 1opk_A P150, C-ABL, proto-onco 100.0 9.4E-39 3.2E-43 376.6 17.9 254 749-1027 219-475 (495)
149 2v62_A Serine/threonine-protei 100.0 2E-38 6.8E-43 357.2 19.8 264 749-1027 36-325 (345)
150 4agu_A Cyclin-dependent kinase 100.0 4.9E-38 1.7E-42 348.9 22.7 267 750-1023 3-284 (311)
151 3cok_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 346.6 18.6 249 749-1023 10-262 (278)
152 2ac3_A MAP kinase-interacting 100.0 2.5E-38 8.4E-43 352.2 20.2 268 750-1024 12-296 (316)
153 1p4o_A Insulin-like growth fac 100.0 4E-39 1.4E-43 359.6 13.5 258 746-1026 21-295 (322)
154 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-38 3.8E-43 357.5 17.0 251 749-1023 21-277 (342)
155 3fdn_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 346.1 18.7 248 748-1024 7-258 (279)
156 2eva_A TAK1 kinase - TAB1 chim 100.0 2.8E-38 9.7E-43 349.8 19.8 249 750-1026 8-259 (307)
157 3ttj_A Mitogen-activated prote 100.0 4.6E-38 1.6E-42 367.0 22.5 266 748-1024 60-356 (464)
158 3nsz_A CK II alpha, casein kin 100.0 7.5E-38 2.6E-42 350.7 23.3 262 749-1023 35-319 (330)
159 3rp9_A Mitogen-activated prote 100.0 3.2E-38 1.1E-42 369.9 21.0 271 749-1024 52-397 (458)
160 2eue_A Carbon catabolite derep 100.0 2.2E-38 7.7E-43 345.0 18.3 245 750-1023 13-262 (275)
161 4ejn_A RAC-alpha serine/threon 100.0 1E-38 3.5E-43 372.4 16.5 248 749-1023 147-404 (446)
162 2acx_A G protein-coupled recep 100.0 2.3E-38 7.7E-43 372.9 19.4 253 748-1023 182-444 (576)
163 1u59_A Tyrosine-protein kinase 100.0 2.4E-38 8.3E-43 347.0 18.3 253 750-1026 9-268 (287)
164 3kfa_A Tyrosine-protein kinase 100.0 2E-38 7E-43 347.9 17.7 254 748-1026 11-267 (288)
165 3f66_A Hepatocyte growth facto 100.0 2.3E-38 8E-43 349.3 18.2 254 750-1026 25-287 (298)
166 2i1m_A Macrophage colony-stimu 100.0 1.9E-38 6.6E-43 355.9 17.8 257 748-1026 44-322 (333)
167 4hgt_A Casein kinase I isoform 100.0 1.3E-37 4.4E-42 343.0 24.0 259 747-1026 6-276 (296)
168 2wqm_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 350.4 19.1 257 748-1026 30-293 (310)
169 3lxp_A Non-receptor tyrosine-p 100.0 3.1E-38 1E-42 351.5 19.1 264 752-1026 33-306 (318)
170 3g2f_A Bone morphogenetic prot 100.0 1.3E-38 4.5E-43 357.8 16.3 269 749-1026 12-314 (336)
171 3mtl_A Cell division protein k 100.0 1.3E-38 4.5E-43 355.3 16.1 267 750-1023 2-281 (324)
172 3brb_A Proto-oncogene tyrosine 100.0 3.9E-38 1.3E-42 350.1 19.6 257 747-1026 31-304 (313)
173 1u5q_A Serine/threonine protei 100.0 2.9E-38 1E-42 355.2 18.8 245 750-1023 54-305 (348)
174 1mqb_A Ephrin type-A receptor 100.0 4.1E-38 1.4E-42 352.6 20.0 254 750-1026 44-305 (333)
175 1o6v_A Internalin A; bacterial 100.0 7.3E-37 2.5E-41 359.2 31.4 102 123-232 46-147 (466)
176 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-38 3.9E-43 371.9 15.9 253 749-1027 183-437 (452)
177 3dls_A PAS domain-containing s 100.0 1.6E-38 5.5E-43 355.8 16.4 243 748-1024 22-275 (335)
178 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.5E-38 1.9E-42 356.7 21.0 248 748-1026 63-335 (365)
179 3c1x_A Hepatocyte growth facto 100.0 1.4E-38 5E-43 360.8 16.2 253 751-1026 90-351 (373)
180 3cc6_A Protein tyrosine kinase 100.0 2.8E-38 9.7E-43 345.4 17.9 253 749-1026 11-269 (281)
181 1nxk_A MAP kinase-activated pr 100.0 3.1E-38 1.1E-42 361.9 19.0 249 750-1024 61-322 (400)
182 3pls_A Macrophage-stimulating 100.0 5.7E-38 1.9E-42 346.2 20.2 254 751-1026 22-283 (298)
183 3llt_A Serine/threonine kinase 100.0 3.8E-38 1.3E-42 357.5 19.0 273 739-1023 24-355 (360)
184 3uzp_A CKI-delta, CKID, casein 100.0 2.2E-37 7.6E-42 341.1 24.5 257 749-1026 8-276 (296)
185 3is5_A Calcium-dependent prote 100.0 4.9E-38 1.7E-42 344.1 19.1 249 750-1023 22-278 (285)
186 3i6u_A CDS1, serine/threonine- 100.0 7.4E-38 2.5E-42 361.4 21.3 254 747-1024 132-400 (419)
187 2jam_A Calcium/calmodulin-depe 100.0 5.1E-38 1.7E-42 347.6 18.9 250 749-1023 8-261 (304)
188 2buj_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 351.8 17.0 256 750-1026 29-302 (317)
189 2y7j_A Phosphorylase B kinase 100.0 1.5E-37 5E-42 352.4 22.9 254 746-1023 90-359 (365)
190 2h34_A Serine/threonine-protei 100.0 7.2E-38 2.5E-42 346.9 19.9 255 749-1026 33-292 (309)
191 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.8E-38 2.3E-42 368.3 20.8 253 749-1023 184-448 (543)
192 3bhy_A Death-associated protei 100.0 1.1E-37 3.9E-42 341.0 21.2 250 750-1023 5-265 (283)
193 3pg1_A Mitogen-activated prote 100.0 9.9E-38 3.4E-42 354.4 21.5 277 740-1024 12-317 (362)
194 4eut_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 362.3 17.2 272 749-1026 8-305 (396)
195 3mwu_A Calmodulin-domain prote 100.0 9.5E-38 3.3E-42 368.4 21.7 251 749-1024 21-277 (486)
196 1cm8_A Phosphorylated MAP kina 100.0 7.3E-38 2.5E-42 355.0 19.8 263 749-1024 24-308 (367)
197 2jii_A Serine/threonine-protei 100.0 2.8E-38 9.7E-43 357.1 16.4 258 750-1026 42-332 (352)
198 1qpc_A LCK kinase; alpha beta 100.0 2.2E-38 7.6E-43 345.8 15.0 252 749-1026 12-265 (279)
199 2w1i_A JAK2; chromosomal rearr 100.0 3.9E-38 1.3E-42 352.1 17.0 266 749-1026 40-318 (326)
200 1ua2_A CAK, cell division prot 100.0 4.9E-38 1.7E-42 354.2 17.9 271 747-1024 7-292 (346)
201 4aaa_A Cyclin-dependent kinase 100.0 8.4E-38 2.9E-42 350.2 19.1 269 748-1023 23-306 (331)
202 1b6c_B TGF-B superfamily recep 100.0 4.4E-37 1.5E-41 346.3 25.1 271 741-1026 33-332 (342)
203 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-37 6.6E-42 367.3 23.0 251 748-1023 34-301 (504)
204 2vgo_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 340.8 19.6 246 749-1023 13-262 (284)
205 2rku_A Serine/threonine-protei 100.0 1E-37 3.4E-42 343.5 18.9 248 749-1023 14-265 (294)
206 2ozo_A Tyrosine-protein kinase 100.0 7.5E-38 2.6E-42 377.5 19.4 246 757-1026 343-594 (613)
207 3lij_A Calcium/calmodulin depe 100.0 1.3E-37 4.3E-42 368.0 20.9 249 750-1023 37-291 (494)
208 3com_A Serine/threonine-protei 100.0 1.8E-37 6.2E-42 344.9 20.9 251 748-1023 27-278 (314)
209 3byv_A Rhoptry kinase; malaria 100.0 1.2E-38 4.1E-43 363.5 11.6 240 749-1023 72-359 (377)
210 2yfx_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 352.1 15.6 255 749-1026 29-300 (327)
211 2j7t_A Serine/threonine-protei 100.0 4.2E-38 1.4E-42 348.0 15.4 253 748-1023 17-275 (302)
212 1xbb_A Tyrosine-protein kinase 100.0 5.1E-38 1.7E-42 345.2 15.9 253 749-1026 15-275 (291)
213 3eqc_A Dual specificity mitoge 100.0 6.5E-38 2.2E-42 355.6 17.2 263 749-1023 32-324 (360)
214 3gbz_A Kinase, CMGC CDK; ssgci 100.0 4.2E-38 1.4E-42 352.1 15.4 269 747-1023 31-318 (329)
215 2clq_A Mitogen-activated prote 100.0 2.4E-37 8.2E-42 340.6 21.1 250 751-1023 23-278 (295)
216 3gxj_A TGF-beta receptor type- 100.0 5.3E-39 1.8E-43 355.4 7.7 263 750-1027 3-294 (303)
217 1t4h_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 337.8 22.7 246 751-1023 27-282 (290)
218 3nyv_A Calmodulin-domain prote 100.0 5.8E-38 2E-42 370.5 17.0 249 750-1023 26-281 (484)
219 1fvr_A Tyrosine-protein kinase 100.0 9.7E-38 3.3E-42 349.1 17.9 251 750-1026 25-296 (327)
220 3a7i_A MST3 kinase, serine/thr 100.0 2.1E-37 7.2E-42 342.5 20.2 249 749-1024 21-271 (303)
221 2owb_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 349.7 18.0 248 749-1023 40-291 (335)
222 3eb0_A Putative uncharacterize 100.0 2.5E-37 8.4E-42 353.5 21.3 266 746-1023 3-321 (383)
223 3mi9_A Cell division protein k 100.0 2.3E-37 7.8E-42 349.8 20.5 269 750-1023 17-311 (351)
224 1byg_A CSK, protein (C-termina 100.0 6.9E-38 2.3E-42 341.7 15.3 247 749-1026 20-269 (278)
225 3sv0_A Casein kinase I-like; t 100.0 9.6E-37 3.3E-41 355.6 25.8 259 749-1026 6-274 (483)
226 2id5_A Lingo-1, leucine rich r 100.0 1.9E-37 6.6E-42 365.8 20.1 320 261-636 14-334 (477)
227 1u46_A ACK-1, activated CDC42 100.0 9.4E-38 3.2E-42 343.1 15.8 254 750-1026 18-280 (291)
228 3lm5_A Serine/threonine-protei 100.0 2E-37 7E-42 346.2 18.6 252 749-1023 27-287 (327)
229 2h8h_A Proto-oncogene tyrosine 100.0 4.7E-38 1.6E-42 374.0 14.3 253 749-1027 266-520 (535)
230 3qyz_A Mitogen-activated prote 100.0 5.8E-37 2E-41 348.0 22.3 269 748-1023 25-313 (364)
231 3q60_A ROP5B; pseudokinase, tr 100.0 6.5E-38 2.2E-42 356.8 14.3 253 750-1023 62-352 (371)
232 3fme_A Dual specificity mitoge 100.0 1.6E-37 5.5E-42 341.1 17.0 250 749-1023 6-266 (290)
233 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-37 8E-42 376.6 19.8 249 748-1023 339-597 (674)
234 3cek_A Dual specificity protei 100.0 8.9E-38 3E-42 347.2 14.7 253 747-1023 25-292 (313)
235 2fst_X Mitogen-activated prote 100.0 1.3E-37 4.4E-42 352.5 16.3 262 749-1023 28-311 (367)
236 2w5a_A Serine/threonine-protei 100.0 5.7E-38 1.9E-42 342.6 12.8 252 749-1025 5-269 (279)
237 1vzo_A Ribosomal protein S6 ki 100.0 1.2E-37 4E-42 352.0 15.7 253 750-1024 54-322 (355)
238 2h6d_A 5'-AMP-activated protei 100.0 2.9E-37 1E-41 336.4 18.3 248 749-1024 10-262 (276)
239 2wtk_C Serine/threonine-protei 100.0 6.6E-37 2.3E-41 338.9 21.4 251 749-1024 4-264 (305)
240 2xrw_A Mitogen-activated prote 100.0 5E-37 1.7E-41 349.2 20.9 265 749-1024 24-319 (371)
241 1phk_A Phosphorylase kinase; g 100.0 7.3E-37 2.5E-41 337.3 21.5 252 748-1023 15-283 (298)
242 2vwi_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 346.2 13.5 263 747-1023 12-287 (303)
243 3ll6_A Cyclin G-associated kin 100.0 1.9E-37 6.6E-42 348.4 16.9 251 749-1026 27-304 (337)
244 2ycf_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 341.8 20.7 251 749-1023 9-274 (322)
245 3kvw_A DYRK2, dual specificity 100.0 9.5E-37 3.2E-41 353.0 22.7 264 749-1023 96-408 (429)
246 2pml_X PFPK7, Ser/Thr protein 100.0 2.7E-37 9.3E-42 348.9 17.7 263 749-1023 30-322 (348)
247 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-37 2.9E-41 334.9 21.1 244 749-1024 10-280 (289)
248 3an0_A Dual specificity mitoge 100.0 3E-37 1E-41 347.2 17.6 251 748-1023 49-310 (340)
249 4fl3_A Tyrosine-protein kinase 100.0 2.8E-37 9.5E-42 373.3 18.1 246 756-1026 375-627 (635)
250 2a19_B Interferon-induced, dou 100.0 1.9E-37 6.6E-42 339.4 14.9 243 749-1026 10-270 (284)
251 2r3i_A Cell division protein k 100.0 6.6E-37 2.3E-41 337.8 19.3 267 750-1023 3-283 (299)
252 2i6l_A Mitogen-activated prote 100.0 9.3E-37 3.2E-41 340.1 20.5 268 749-1023 10-305 (320)
253 4exu_A Mitogen-activated prote 100.0 8E-37 2.7E-41 347.5 19.9 263 749-1024 41-324 (371)
254 1j1b_A Glycogen synthase kinas 100.0 7.3E-37 2.5E-41 353.1 19.5 262 750-1023 54-336 (420)
255 1wak_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 352.6 19.0 265 749-1023 36-391 (397)
256 2x7f_A TRAF2 and NCK-interacti 100.0 2.6E-37 9E-42 345.6 15.1 254 745-1023 19-286 (326)
257 4e7w_A Glycogen synthase kinas 100.0 9E-37 3.1E-41 349.5 19.2 264 750-1024 40-322 (394)
258 2id5_A Lingo-1, leucine rich r 100.0 5.7E-36 1.9E-40 353.3 26.6 319 28-376 13-332 (477)
259 2b9h_A MAP kinase FUS3, mitoge 100.0 2.1E-36 7.2E-41 342.3 21.3 269 748-1023 9-305 (353)
260 1zy4_A Serine/threonine-protei 100.0 1.5E-36 5E-41 335.7 19.3 253 749-1024 5-284 (303)
261 3rgf_A Cyclin-dependent kinase 100.0 6.1E-37 2.1E-41 353.0 15.7 266 752-1023 22-333 (405)
262 2wei_A Calmodulin-domain prote 100.0 2.3E-36 7.8E-41 331.3 19.1 252 747-1023 19-276 (287)
263 1z57_A Dual specificity protei 100.0 5.5E-36 1.9E-40 336.8 22.4 264 749-1023 13-328 (339)
264 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.5E-37 5E-42 346.5 8.8 256 747-1027 30-299 (319)
265 1blx_A Cyclin-dependent kinase 100.0 4.4E-36 1.5E-40 335.7 20.7 268 748-1023 9-296 (326)
266 2j0j_A Focal adhesion kinase 1 100.0 1.7E-36 5.7E-41 367.9 18.0 253 749-1026 389-647 (656)
267 3e3p_A Protein kinase, putativ 100.0 8.4E-36 2.9E-40 338.3 22.2 274 743-1023 16-314 (360)
268 3coi_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 340.5 18.5 262 749-1023 23-305 (353)
269 2vx3_A Dual specificity tyrosi 100.0 1.7E-35 5.9E-40 338.1 24.1 201 747-955 51-261 (382)
270 2rio_A Serine/threonine-protei 100.0 6E-36 2E-40 347.1 20.3 250 751-1023 16-295 (434)
271 3fhr_A MAP kinase-activated pr 100.0 2.9E-36 9.9E-41 337.9 17.1 252 748-1023 26-287 (336)
272 3aln_A Dual specificity mitoge 100.0 5.2E-36 1.8E-40 335.1 17.8 253 749-1023 21-285 (327)
273 2eu9_A Dual specificity protei 100.0 2E-35 6.8E-40 334.6 22.5 263 749-1023 18-333 (355)
274 2dyl_A Dual specificity mitoge 100.0 5.4E-36 1.9E-40 333.7 17.4 251 749-1023 24-283 (318)
275 3oja_B Anopheles plasmodium-re 100.0 9.9E-36 3.4E-40 360.3 20.4 335 290-686 50-384 (597)
276 3p23_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 347.8 15.4 249 750-1023 24-283 (432)
277 1q8y_A SR protein kinase; tran 100.0 7.1E-36 2.4E-40 340.7 17.4 265 749-1023 18-333 (373)
278 3a99_A Proto-oncogene serine/t 100.0 1.6E-36 5.6E-41 337.7 11.4 245 744-1023 37-293 (320)
279 3o6n_A APL1; leucine-rich repe 100.0 2.4E-35 8.2E-40 338.3 20.3 335 290-686 44-378 (390)
280 2iwi_A Serine/threonine-protei 100.0 3.9E-36 1.3E-40 333.8 12.3 243 746-1023 27-283 (312)
281 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-35 4.4E-40 328.8 16.2 260 364-694 50-313 (313)
282 3qa8_A MGC80376 protein; kinas 100.0 7.2E-36 2.5E-40 354.5 10.4 264 749-1022 13-296 (676)
283 3uqc_A Probable conserved tran 100.0 1.2E-34 4.1E-39 316.5 18.5 227 750-1026 31-261 (286)
284 3o6n_A APL1; leucine-rich repe 100.0 1.5E-33 5.1E-38 323.3 26.5 310 49-426 44-353 (390)
285 4fmz_A Internalin; leucine ric 100.0 3.6E-33 1.2E-37 314.9 27.2 305 48-425 42-346 (347)
286 3m2w_A MAP kinase-activated pr 100.0 5.9E-34 2E-38 314.0 20.0 229 750-1023 17-256 (299)
287 3dzo_A Rhoptry kinase domain; 100.0 1.7E-34 5.7E-39 332.7 13.4 239 750-1023 78-363 (413)
288 4fmz_A Internalin; leucine ric 100.0 1.3E-32 4.5E-37 310.3 28.3 307 22-377 40-346 (347)
289 2pzi_A Probable serine/threoni 100.0 3.7E-34 1.3E-38 351.2 16.5 236 749-1025 79-323 (681)
290 3oja_B Anopheles plasmodium-re 100.0 5.2E-33 1.8E-37 336.5 25.3 308 98-453 51-358 (597)
291 2ft3_A Biglycan; proteoglycan, 100.0 1.4E-32 4.8E-37 307.7 24.9 288 27-350 34-331 (332)
292 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-33 5.2E-38 312.2 15.6 232 362-662 74-308 (313)
293 1xku_A Decorin; proteoglycan, 100.0 3.5E-32 1.2E-36 304.3 25.7 289 26-349 31-329 (330)
294 2vuw_A Serine/threonine-protei 100.0 1.3E-33 4.3E-38 316.9 13.3 243 749-1022 19-329 (336)
295 2ft3_A Biglycan; proteoglycan, 100.0 6.4E-32 2.2E-36 302.4 25.1 294 259-633 34-331 (332)
296 1xku_A Decorin; proteoglycan, 100.0 4.1E-31 1.4E-35 295.6 27.7 288 76-423 33-330 (330)
297 1z7x_W Ribonuclease inhibitor; 100.0 1.4E-34 4.9E-39 340.0 -6.4 357 2-402 3-412 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 2E-34 6.9E-39 338.7 -8.9 365 258-661 3-413 (461)
299 2z66_A Variable lymphocyte rec 100.0 6.4E-29 2.2E-33 274.7 20.4 284 5-314 10-297 (306)
300 3ogk_B Coronatine-insensitive 100.0 4E-31 1.4E-35 321.0 1.3 132 96-228 110-252 (592)
301 4fcg_A Uncharacterized protein 100.0 7.7E-29 2.7E-33 276.0 18.8 234 364-659 81-314 (328)
302 2z80_A TOLL-like receptor 2, v 100.0 2.4E-29 8.4E-34 284.0 14.2 286 22-328 27-314 (353)
303 4fcg_A Uncharacterized protein 100.0 7.6E-29 2.6E-33 276.0 17.1 216 387-664 80-295 (328)
304 3ogk_B Coronatine-insensitive 100.0 1.1E-30 3.9E-35 317.0 1.3 379 48-455 110-528 (592)
305 2z80_A TOLL-like receptor 2, v 100.0 1.1E-28 3.8E-33 278.6 17.0 281 97-429 30-318 (353)
306 2z66_A Variable lymphocyte rec 100.0 3.8E-28 1.3E-32 268.5 19.0 249 29-306 10-263 (306)
307 1ozn_A Reticulon 4 receptor; N 100.0 6.7E-28 2.3E-32 263.5 20.2 255 29-312 14-269 (285)
308 3g06_A SSPH2 (leucine-rich rep 100.0 1.6E-27 5.5E-32 285.2 24.3 268 292-646 41-308 (622)
309 3oja_A Leucine-rich immune mol 100.0 2.2E-29 7.4E-34 295.8 7.0 236 363-654 33-270 (487)
310 3zyj_A Leucine-rich repeat-con 100.0 3.3E-27 1.1E-31 274.8 25.4 249 27-305 44-293 (440)
311 3zyi_A Leucine-rich repeat-con 100.0 3.3E-27 1.1E-31 275.9 25.2 248 28-305 56-304 (452)
312 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-27 6.4E-32 260.0 20.3 225 5-233 14-239 (285)
313 3o53_A Protein LRIM1, AGAP0063 100.0 2.9E-29 9.9E-34 278.5 5.8 246 363-664 33-281 (317)
314 1wwl_A Monocyte differentiatio 99.9 3E-28 1E-32 269.7 10.2 133 287-424 39-185 (312)
315 3zyi_A Leucine-rich repeat-con 99.9 9.5E-27 3.2E-31 272.0 22.8 249 3-272 55-304 (452)
316 3o53_A Protein LRIM1, AGAP0063 99.9 2E-28 6.7E-33 271.8 8.1 257 28-323 12-270 (317)
317 4azs_A Methyltransferase WBDD; 99.9 1.1E-28 3.8E-33 293.5 5.5 185 757-951 241-437 (569)
318 1wwl_A Monocyte differentiatio 99.9 2.6E-28 9E-33 270.2 7.7 205 22-232 39-266 (312)
319 3zyj_A Leucine-rich repeat-con 99.9 1.6E-26 5.4E-31 269.1 22.9 249 3-272 44-293 (440)
320 3g06_A SSPH2 (leucine-rich rep 99.9 5.6E-26 1.9E-30 271.9 26.3 261 28-357 42-302 (622)
321 3oja_A Leucine-rich immune mol 99.9 3.4E-26 1.2E-30 268.6 10.9 169 51-232 35-204 (487)
322 2p1m_B Transport inhibitor res 99.9 1E-27 3.4E-32 291.3 -2.4 34 387-420 371-405 (594)
323 2p1m_B Transport inhibitor res 99.9 6E-28 2E-32 293.2 -5.7 161 488-657 371-542 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 1.6E-24 5.6E-29 235.4 19.2 197 31-232 12-213 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 3E-24 1E-28 233.3 20.4 226 6-236 11-241 (276)
326 2o6q_A Variable lymphocyte rec 99.9 1.3E-23 4.4E-28 227.3 22.2 202 27-232 17-218 (270)
327 3rfs_A Internalin B, repeat mo 99.9 7.1E-24 2.4E-28 229.5 16.4 223 27-278 20-242 (272)
328 2o6q_A Variable lymphocyte rec 99.9 4E-23 1.4E-27 223.5 22.2 204 3-210 17-220 (270)
329 1p9a_G Platelet glycoprotein I 99.9 2.9E-23 9.8E-28 226.5 20.8 203 22-232 6-208 (290)
330 3en9_A Glycoprotease, O-sialog 99.9 7.1E-25 2.4E-29 259.4 7.2 186 753-953 339-539 (540)
331 1p9a_G Platelet glycoprotein I 99.9 5.4E-23 1.8E-27 224.4 21.2 204 46-305 6-209 (290)
332 3rfs_A Internalin B, repeat mo 99.9 3.1E-23 1.1E-27 224.5 17.9 222 5-240 22-243 (272)
333 3goz_A Leucine-rich repeat-con 99.9 5.2E-25 1.8E-29 249.1 1.8 264 296-613 3-299 (362)
334 2ca6_A RAN GTPase-activating p 99.9 1E-24 3.5E-29 249.3 2.4 255 379-663 23-320 (386)
335 3goz_A Leucine-rich repeat-con 99.9 4.6E-24 1.6E-28 241.4 7.1 265 7-309 3-302 (362)
336 4glp_A Monocyte differentiatio 99.9 2.9E-23 1E-27 229.4 10.9 225 26-272 64-308 (310)
337 2ca6_A RAN GTPase-activating p 99.9 2.6E-24 8.9E-29 245.9 1.4 216 17-232 23-287 (386)
338 2ast_B S-phase kinase-associat 99.9 1.4E-23 4.7E-28 235.2 7.3 222 4-229 49-282 (336)
339 2xwt_C Thyrotropin receptor; s 99.9 1.9E-22 6.4E-27 214.0 14.5 178 51-232 32-218 (239)
340 4glp_A Monocyte differentiatio 99.9 1.7E-22 6E-27 223.2 14.4 225 3-232 65-307 (310)
341 2xwt_C Thyrotropin receptor; s 99.9 7.2E-22 2.5E-26 209.5 16.3 209 11-230 20-237 (239)
342 1h6u_A Internalin H; cell adhe 99.9 9.6E-22 3.3E-26 216.7 17.4 206 8-232 25-230 (308)
343 2ast_B S-phase kinase-associat 99.9 4.4E-23 1.5E-27 231.1 6.7 250 317-664 49-311 (336)
344 3m19_A Variable lymphocyte rec 99.9 2.2E-21 7.4E-26 207.3 18.6 179 28-234 16-194 (251)
345 4ay9_X Follicle-stimulating ho 99.9 6.6E-22 2.2E-26 222.5 14.8 170 29-227 12-185 (350)
346 3m19_A Variable lymphocyte rec 99.9 4.2E-21 1.4E-25 205.1 19.6 179 3-185 15-193 (251)
347 1zar_A RIO2 kinase; serine kin 99.9 2.2E-22 7.4E-27 218.0 9.3 152 743-925 83-252 (282)
348 1h6u_A Internalin H; cell adhe 99.9 3.4E-21 1.1E-25 212.3 18.8 197 1-215 40-236 (308)
349 4ay9_X Follicle-stimulating ho 99.9 2.8E-21 9.5E-26 217.3 17.9 206 174-430 12-220 (350)
350 3cvr_A Invasion plasmid antige 99.9 1E-21 3.6E-26 231.9 12.3 189 389-647 60-255 (571)
351 3cvr_A Invasion plasmid antige 99.8 4.9E-21 1.7E-25 226.2 13.4 189 365-623 60-255 (571)
352 2o6s_A Variable lymphocyte rec 99.8 4.1E-20 1.4E-24 191.3 16.3 181 29-220 10-190 (208)
353 2o6s_A Variable lymphocyte rec 99.8 4.5E-20 1.5E-24 191.1 14.8 181 261-465 10-190 (208)
354 1dce_A Protein (RAB geranylger 99.8 1.1E-21 3.8E-26 233.2 -5.9 204 385-664 346-551 (567)
355 1m9s_A Internalin B; cell inva 99.8 1.8E-19 6.2E-24 215.4 12.2 170 48-232 41-210 (605)
356 1h6t_A Internalin B; cell adhe 99.8 8.6E-19 2.9E-23 191.2 16.2 186 30-232 28-213 (291)
357 1h6t_A Internalin B; cell adhe 99.8 3.9E-19 1.3E-23 194.0 13.2 186 7-209 29-214 (291)
358 2xot_A Amphoterin-induced prot 99.8 6.4E-19 2.2E-23 198.9 14.0 176 29-232 21-202 (361)
359 1m9s_A Internalin B; cell inva 99.8 8.9E-19 3E-23 209.4 15.6 185 8-209 27-211 (605)
360 2v9t_B SLIT homolog 2 protein 99.8 1.6E-18 5.5E-23 180.7 15.6 152 29-184 14-165 (220)
361 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-18 5.9E-23 180.4 15.0 153 78-233 15-167 (220)
362 2v9t_B SLIT homolog 2 protein 99.8 1.6E-18 5.4E-23 180.7 14.6 154 261-427 14-167 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 3.9E-18 1.3E-22 177.7 15.9 153 29-209 14-167 (220)
364 1dce_A Protein (RAB geranylger 99.8 1.8E-20 6.2E-25 222.8 -2.1 171 480-686 363-549 (567)
365 2xot_A Amphoterin-induced prot 99.8 1.7E-18 5.7E-23 195.4 13.3 177 77-272 21-203 (361)
366 4b8c_D Glucose-repressible alc 99.8 2.2E-19 7.7E-24 220.3 6.3 155 486-662 244-407 (727)
367 3e6j_A Variable lymphocyte rec 99.7 9.7E-18 3.3E-22 176.0 15.5 156 260-429 21-176 (229)
368 4ezg_A Putative uncharacterize 99.7 3.5E-18 1.2E-22 175.0 11.3 157 484-660 39-195 (197)
369 3e6j_A Variable lymphocyte rec 99.7 1.9E-17 6.4E-22 173.8 16.4 151 54-233 23-173 (229)
370 4b8c_D Glucose-repressible alc 99.7 8.1E-19 2.8E-23 215.3 6.0 154 480-656 215-369 (727)
371 1w8a_A SLIT protein; signaling 99.7 1.8E-18 6.1E-23 176.2 6.7 136 551-686 30-166 (192)
372 1xeu_A Internalin C; cellular 99.7 3.1E-18 1.1E-22 183.7 8.9 167 26-232 19-185 (263)
373 1xeu_A Internalin C; cellular 99.7 1.9E-18 6.4E-23 185.5 6.1 168 3-186 20-187 (263)
374 1zth_A RIO1 serine protein kin 99.7 7.5E-18 2.6E-22 180.2 10.6 137 752-900 49-219 (258)
375 3sb4_A Hypothetical leucine ri 99.7 8.7E-18 3E-22 187.1 8.4 81 287-370 246-327 (329)
376 4ezg_A Putative uncharacterize 99.7 3.9E-17 1.3E-21 167.1 12.5 155 22-185 40-195 (197)
377 1w8a_A SLIT protein; signaling 99.7 5.4E-17 1.8E-21 165.2 11.0 175 492-686 11-187 (192)
378 3sb4_A Hypothetical leucine ri 99.7 1.5E-16 5.2E-21 177.0 10.9 260 1-297 48-327 (329)
379 4fdw_A Leucine rich hypothetic 99.6 9.5E-15 3.2E-19 165.9 21.0 263 146-474 112-379 (401)
380 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4E-20 151.8 11.8 133 26-184 24-160 (168)
381 2ell_A Acidic leucine-rich nuc 99.6 8.2E-16 2.8E-20 152.9 10.2 133 513-661 24-162 (168)
382 4gyi_A RIO2 kinase; protein ki 99.6 1.5E-16 5.1E-21 175.8 4.9 137 751-899 96-264 (397)
383 4fdw_A Leucine rich hypothetic 99.6 2E-14 6.9E-19 163.2 21.7 269 49-351 112-382 (401)
384 4fs7_A Uncharacterized protein 99.6 1.9E-14 6.6E-19 164.2 21.6 335 38-417 59-393 (394)
385 2je0_A Acidic leucine-rich nuc 99.6 8.4E-16 2.9E-20 149.5 8.7 129 512-655 16-149 (149)
386 2wfh_A SLIT homolog 2 protein 99.6 2E-15 6.7E-20 153.6 10.6 110 550-660 31-140 (193)
387 2o6r_A Variable lymphocyte rec 99.6 2E-15 7E-20 151.4 10.4 114 550-663 28-141 (177)
388 2je0_A Acidic leucine-rich nuc 99.6 2.2E-15 7.5E-20 146.5 9.3 127 26-179 17-148 (149)
389 4fs7_A Uncharacterized protein 99.6 6.5E-14 2.2E-18 159.8 22.8 336 61-445 58-393 (394)
390 2wfh_A SLIT homolog 2 protein 99.6 8.4E-15 2.9E-19 148.9 13.3 128 29-185 13-140 (193)
391 1ds9_A Outer arm dynein; leuci 99.6 7E-17 2.4E-21 165.4 -2.5 151 488-659 17-185 (198)
392 2o6r_A Variable lymphocyte rec 99.5 2.5E-14 8.4E-19 143.5 13.1 114 123-236 28-141 (177)
393 1ds9_A Outer arm dynein; leuci 99.5 2.7E-16 9.1E-21 161.0 -1.9 136 481-636 40-186 (198)
394 1a9n_A U2A', U2A'; complex (nu 99.5 1.3E-14 4.6E-19 145.2 8.5 105 551-659 43-153 (176)
395 1a9n_A U2A', U2A'; complex (nu 99.5 4.9E-14 1.7E-18 141.1 9.9 134 22-184 15-153 (176)
396 3g39_A Variable lymphocyte rec 99.4 1.5E-13 5.2E-18 136.4 9.0 108 553-663 12-119 (170)
397 3g39_A Variable lymphocyte rec 99.4 3.1E-13 1.1E-17 134.2 9.7 109 515-639 11-119 (170)
398 2r9u_A Variable lymphocyte rec 99.4 3.1E-13 1E-17 134.7 9.1 107 553-662 15-121 (174)
399 2r9u_A Variable lymphocyte rec 99.4 5.6E-13 1.9E-17 132.8 9.8 112 516-644 15-126 (174)
400 4gt6_A Cell surface protein; l 99.4 3.3E-11 1.1E-15 137.4 24.2 336 62-452 51-390 (394)
401 4gt6_A Cell surface protein; l 99.3 1.4E-10 4.6E-15 132.2 25.4 329 43-423 56-389 (394)
402 3un9_A NLR family member X1; l 99.3 4.8E-13 1.6E-17 150.4 1.6 161 488-660 71-253 (372)
403 3un9_A NLR family member X1; l 99.3 2E-13 7E-18 153.4 -1.9 159 74-232 72-252 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.2 2.6E-11 8.8E-16 129.9 11.7 146 746-898 10-212 (263)
405 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.5E-16 138.2 8.3 94 540-636 22-117 (347)
406 2ifg_A High affinity nerve gro 99.1 7.1E-11 2.4E-15 132.2 10.2 102 7-111 13-116 (347)
407 1nd4_A Aminoglycoside 3'-phosp 99.1 2.4E-10 8E-15 122.3 10.5 136 751-898 21-213 (264)
408 4h09_A Hypothetical leucine ri 99.0 1.9E-08 6.6E-13 113.8 23.0 135 287-427 213-347 (379)
409 4h09_A Hypothetical leucine ri 99.0 2.7E-08 9.3E-13 112.5 24.0 301 22-363 42-355 (379)
410 3dxp_A Putative acyl-COA dehyd 98.9 4.3E-09 1.5E-13 118.2 10.4 144 752-899 40-248 (359)
411 2ra8_A Uncharacterized protein 98.8 1.2E-09 4.1E-14 121.5 4.0 179 27-208 108-320 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.8 2.9E-09 9.8E-14 116.5 5.8 187 755-952 25-287 (304)
413 2ra8_A Uncharacterized protein 98.8 2.6E-09 8.9E-14 118.8 4.6 183 19-206 132-341 (362)
414 3r70_A Aminoglycoside phosphot 98.5 4.9E-07 1.7E-11 99.4 13.0 136 751-899 38-237 (320)
415 3rw6_A Nuclear RNA export fact 98.5 1.9E-08 6.4E-13 105.9 0.6 80 571-652 167-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.4 9.2E-08 3.2E-12 95.8 3.4 117 44-160 30-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.4 8.8E-08 3E-12 96.0 3.0 121 482-635 29-164 (185)
418 3rw6_A Nuclear RNA export fact 98.4 6.4E-08 2.2E-12 101.8 1.4 92 571-664 138-238 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.4 3.5E-06 1.2E-10 90.2 15.1 134 757-898 31-222 (272)
420 3d1u_A Putative fructosamine-3 98.3 3.1E-06 1.1E-10 91.0 13.3 77 753-833 18-97 (288)
421 3tdw_A Gentamicin resistance p 98.3 3.7E-06 1.3E-10 91.6 13.7 136 755-899 24-224 (306)
422 3ovc_A Hygromycin-B 4-O-kinase 98.2 7E-06 2.4E-10 91.6 11.9 142 752-899 43-243 (362)
423 3ats_A Putative uncharacterize 98.1 4.6E-06 1.6E-10 93.2 8.3 80 755-834 25-121 (357)
424 2q83_A YTAA protein; 2635576, 97.9 3.2E-05 1.1E-09 85.8 10.4 139 755-898 37-251 (346)
425 2olc_A MTR kinase, methylthior 97.8 4.7E-05 1.6E-09 86.3 10.5 75 755-831 35-120 (397)
426 3e4g_A ATP synthase subunit S, 97.8 6.4E-06 2.2E-10 80.1 2.5 84 26-109 61-150 (176)
427 3jr1_A Putative fructosamine-3 97.7 0.00022 7.5E-09 77.2 12.5 138 753-895 39-232 (312)
428 3e4g_A ATP synthase subunit S, 97.6 1.9E-05 6.6E-10 76.8 2.8 34 51-84 62-95 (176)
429 3f7w_A Putative fructosamine-3 97.5 0.00034 1.2E-08 75.2 11.1 79 751-833 16-97 (288)
430 1pgv_A TMD-1, tropomodulin TMD 97.3 9.8E-05 3.4E-09 73.2 3.5 67 46-112 37-112 (197)
431 3dxq_A Choline/ethanolamine ki 97.3 0.00085 2.9E-08 72.6 11.2 138 752-898 20-201 (301)
432 1pgv_A TMD-1, tropomodulin TMD 97.3 0.00013 4.5E-09 72.3 3.9 114 21-134 36-168 (197)
433 2pyw_A Uncharacterized protein 97.3 0.00098 3.3E-08 75.9 11.4 77 868-948 231-312 (420)
434 2ppq_A HSK, HK, homoserine kin 97.2 0.0013 4.4E-08 71.9 11.0 155 741-898 8-216 (322)
435 3csv_A Aminoglycoside phosphot 97.0 0.0029 1E-07 69.4 11.7 140 755-899 23-217 (333)
436 1zyl_A Hypothetical protein YI 97.0 0.0045 1.5E-07 67.7 13.1 140 755-898 31-222 (328)
437 1nw1_A Choline kinase (49.2 KD 97.0 0.0012 4.2E-08 75.1 8.4 73 755-833 78-159 (429)
438 3feg_A Choline/ethanolamine ki 96.8 0.0042 1.5E-07 68.9 10.8 139 755-898 55-253 (379)
439 2qg7_A Ethanolamine kinase PV0 96.7 0.0032 1.1E-07 71.9 9.4 74 755-833 113-188 (458)
440 2yle_A Protein spire homolog 1 96.7 0.01 3.5E-07 59.0 11.4 101 832-950 34-134 (229)
441 3c5i_A Choline kinase; choline 96.6 0.0034 1.2E-07 70.0 8.1 74 755-833 38-121 (369)
442 3i1a_A Spectinomycin phosphotr 96.4 0.011 3.7E-07 65.0 11.0 67 760-833 33-108 (339)
443 3rfe_A Platelet glycoprotein I 96.3 0.005 1.7E-07 56.9 6.3 57 368-426 12-69 (130)
444 3rfe_A Platelet glycoprotein I 96.2 0.0047 1.6E-07 57.1 5.6 56 54-111 12-68 (130)
445 3f2s_A CK, chetk-alpha, cholin 95.8 0.019 6.6E-07 63.9 8.8 140 755-898 57-279 (401)
446 3mes_A Choline kinase; malaria 95.0 0.027 9.1E-07 63.4 6.6 74 755-833 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 93.2 0.24 8.2E-06 55.5 9.7 29 870-898 245-279 (401)
448 4ano_A ESSB; membrane protein, 79.2 5.9 0.0002 39.4 8.6 84 804-898 48-132 (219)
449 4ann_A ESSB; membrane protein, 74.1 4.9 0.00017 39.8 6.3 117 804-955 43-160 (215)
450 3cxl_A N-chimerin; SH2, RHO-GA 61.7 1.2 4.1E-05 50.7 -1.2 60 754-816 146-214 (463)
451 2x6h_A GH13170P, VPS34, phosph 48.7 1.8E+02 0.006 34.3 14.1 81 810-898 477-575 (696)
452 3ls8_A Phosphatidylinositol 3- 41.9 3.1E+02 0.011 31.7 14.5 82 809-898 402-501 (614)
453 2lz0_A Uncharacterized protein 34.5 76 0.0026 26.9 6.1 41 138-179 11-51 (100)
454 2lz0_A Uncharacterized protein 30.9 45 0.0016 28.3 4.1 40 306-346 11-50 (100)
455 1cja_A Protein (actin-fragmin 28.0 1.1E+02 0.0037 32.4 7.1 75 820-898 156-236 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.2e-83 Score=803.14 Aligned_cols=656 Identities=31% Similarity=0.452 Sum_probs=599.5
Q ss_pred CCcEEecCCCcCccc---CCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcc--cccCCCCCC
Q 048205 3 NLEYLFLKSNMFHGK---IPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPE--ELGNLAELE 77 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~---~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~--~l~~l~~L~ 77 (1027)
.++.|+|+++.+.+. +|.+|..++.|+.++++.|.+. .+|..++.+++|++|+|++|.+++.+|. .++++++|+
T Consensus 51 ~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~ 129 (768)
T 3rgz_A 51 KVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLK 129 (768)
T ss_dssp EEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCC
T ss_pred cEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCC
Confidence 478999999999987 8899999999999999999987 5788999999999999999999999999 999999999
Q ss_pred EEEccCcccCCccCccc-cCCCCCCeEeCCcccccccchhhh--hcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEc
Q 048205 78 ELWLQNNFLTGTIPSSI-FNLSSLSNLDLSVNNLTGELLANI--CSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSL 154 (1027)
Q Consensus 78 ~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 154 (1027)
+|+|++|.+.+..|..+ .++++|++|+|++|++++..+..+ +.++++|++|++++|++.+..+. ..+++|++|+|
T Consensus 130 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~L 207 (768)
T 3rgz_A 130 FLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDV 207 (768)
T ss_dssp EEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEEC
T ss_pred EEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEEC
Confidence 99999999998888776 899999999999999997655543 78899999999999999976654 88999999999
Q ss_pred cCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCC
Q 048205 155 SINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGN 234 (1027)
Q Consensus 155 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 234 (1027)
++|.+++.+|. ++++++|++|+|++|++++.+|..++.+++|++|+|++|.+++.+|.. .+++|++|++++|+++|.
T Consensus 208 s~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ 284 (768)
T 3rgz_A 208 SSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGE 284 (768)
T ss_dssp CSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEES
T ss_pred cCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCc
Confidence 99999987777 999999999999999999999999999999999999999999887765 899999999999999865
Q ss_pred CCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCcc-ccC
Q 048205 235 FPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHE-IDN 313 (1027)
Q Consensus 235 ~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~-~~~ 313 (1027)
+| ..++..+++|++|++++|.+++. +|..++.+++|++|++++|++++.+|.. |..
T Consensus 285 ip--------------~~~~~~~~~L~~L~Ls~n~l~~~---------~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~ 341 (768)
T 3rgz_A 285 IP--------------DFLSGACDTLTGLDLSGNHFYGA---------VPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341 (768)
T ss_dssp CC--------------CCSCTTCTTCSEEECCSSEEEEC---------CCGGGGGCTTCCEEECCSSEEEEECCHHHHTT
T ss_pred cC--------------HHHHhhcCcCCEEECcCCcCCCc---------cchHHhcCCCccEEECCCCcccCcCCHHHHhc
Confidence 44 44455568999999999999974 5667888999999999999999777765 999
Q ss_pred cCcccceeccCcccccccCccccccC-CcceEEccCccccccCCCCccC-CCCCccEEEccccccCCcCcccccCCCCCC
Q 048205 314 LHNLEWMIFSFNKLVGVVPTTIFNVS-TLKFLYLGSNSFFGRLPSSADV-RLPNLEELSLSGNNFSGTIPSFIFNTSKLS 391 (1027)
Q Consensus 314 l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 391 (1027)
+++|++|++++|++++..|..+.++. +|++|++++|++.+.+|..... .+++|++|+|++|++++.+|..+.++++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 99999999999999999999999998 9999999999999888876542 278999999999999999999999999999
Q ss_pred eeecCCCcccCCCCcccCCcccccEEecCCCCCCC-CCCccccccccccccccEeeccCCCCCCCCCccccCccccccee
Q 048205 392 TLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTS-STSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDF 470 (1027)
Q Consensus 392 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l 470 (1027)
+|+|++|++++.+|..|+.+++|++|++++|+++. +|..+ ..+++|++|++++|++++.+|.++++++ .++.|
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L 495 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL-----MYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWI 495 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGG-----GGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEE
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHH-----cCCCCceEEEecCCcccCcCCHHHhcCC-CCCEE
Confidence 99999999999999999999999999999999984 44433 4789999999999999999999998875 69999
Q ss_pred ecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCcccc------------
Q 048205 471 HMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCT------------ 538 (1027)
Q Consensus 471 ~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~------------ 538 (1027)
++++|.+++.+|.+++.+++|++|+|++|+++|.+|..++++++|++|+|++|+++|.+|..+.....
T Consensus 496 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~ 575 (768)
T 3rgz_A 496 SLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRY 575 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEE
T ss_pred EccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999976532111
Q ss_pred ---------------------ccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccC
Q 048205 539 ---------------------LTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGL 597 (1027)
Q Consensus 539 ---------------------~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l 597 (1027)
....|..+..+..+..++++.|.++|.+|..++.+++|+.|||++|+++|.+|.+|+++
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l 655 (768)
T 3rgz_A 576 VYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSM 655 (768)
T ss_dssp EEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGC
T ss_pred cccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhcc
Confidence 11234556667778888999999999999999999999999999999999999999999
Q ss_pred ccccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCccccccc
Q 048205 598 KDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFK 677 (1027)
Q Consensus 598 ~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~ 677 (1027)
++|+.|+|++|+++|.||++|+++++|+.|||++|+++|.||.+++.+++|++||+++|+++|.||.+++|.+|+..+|.
T Consensus 656 ~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~ 735 (768)
T 3rgz_A 656 PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFL 735 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGC
T ss_pred ccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCcccccccccc
Q 048205 678 GNELLCGMPNLQVRSCRTR 696 (1027)
Q Consensus 678 ~n~~l~g~~~~~~~~c~~~ 696 (1027)
||+++||.|+ ++|...
T Consensus 736 gN~~Lcg~~l---~~C~~~ 751 (768)
T 3rgz_A 736 NNPGLCGYPL---PRCDPS 751 (768)
T ss_dssp SCTEEESTTS---CCCCSC
T ss_pred CCchhcCCCC---cCCCCC
Confidence 9999999994 489754
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.7e-74 Score=720.43 Aligned_cols=610 Identities=33% Similarity=0.450 Sum_probs=548.8
Q ss_pred CCCCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCc--cccccCCCcEEEccccccceeCcccc-cCCCCCC
Q 048205 1 LSNLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPK--EIGNVTTLIGLHLRGNKLQGEIPEEL-GNLAELE 77 (1027)
Q Consensus 1 l~~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~--~i~~l~~L~~L~L~~n~i~~~~p~~l-~~l~~L~ 77 (1027)
|+.|+.++++.|.+. .+|..|..+++|++|+|++|.+++.+|. .++.+++|++|+|++|.+++.+|..+ .++++|+
T Consensus 76 L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 76 LTGLESLFLSNSHIN-GSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp CTTCCEEECTTSCEE-ECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred cCcccccCCcCCCcC-CCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 356778888888776 4668899999999999999999999999 99999999999999999998888876 8999999
Q ss_pred EEEccCcccCCccCcc---ccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEc
Q 048205 78 ELWLQNNFLTGTIPSS---IFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSL 154 (1027)
Q Consensus 78 ~L~L~~N~l~~~~p~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 154 (1027)
+|+|++|.+++..|.. +.++++|++|++++|++++..+. ..+++|++|+|++|++.+.+|. +..+++|++|+|
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~L 230 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV---SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDI 230 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC---TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEEC
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc---ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEEC
Confidence 9999999999888877 88999999999999999865543 6789999999999999988877 999999999999
Q ss_pred cCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCC-CCCCEEEccCccCCC
Q 048205 155 SINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNL-SSLSDLELSFNSLTG 233 (1027)
Q Consensus 155 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~ 233 (1027)
++|.+++.+|..|+++++|++|+|++|++++.+|.. .+++|++|++++|++++.+|..++.. ++|++|++++|++++
T Consensus 231 s~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~ 308 (768)
T 3rgz_A 231 SGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYG 308 (768)
T ss_dssp CSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEE
T ss_pred cCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCC
Confidence 999999999999999999999999999999877765 89999999999999999999998875 999999999999986
Q ss_pred CCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCcc-ccCcCCccceeccCccccccCCcccc
Q 048205 234 NFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKE-IGNLAKLEKLDLQFNRLQCVIPHEID 312 (1027)
Q Consensus 234 ~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~-l~~l~~L~~L~L~~N~l~~~~~~~~~ 312 (1027)
.+|.. +..+++|++|++++|.++|.+ |.. ++.+++|++|++++|++++..|..+.
T Consensus 309 ~~p~~---------------~~~l~~L~~L~L~~n~l~~~i---------p~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 364 (768)
T 3rgz_A 309 AVPPF---------------FGSCSLLESLALSSNNFSGEL---------PMDTLLKMRGLKVLDLSFNEFSGELPESLT 364 (768)
T ss_dssp CCCGG---------------GGGCTTCCEEECCSSEEEEEC---------CHHHHTTCTTCCEEECCSSEEEECCCTTHH
T ss_pred ccchH---------------HhcCCCccEEECCCCcccCcC---------CHHHHhcCCCCCEEeCcCCccCccccHHHH
Confidence 55543 456889999999999998754 433 78899999999999999999999999
Q ss_pred CcC-cccceeccCcccccccCccccc--cCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCC
Q 048205 313 NLH-NLEWMIFSFNKLVGVVPTTIFN--VSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSK 389 (1027)
Q Consensus 313 ~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 389 (1027)
.++ +|+.|++++|++++..|..+.. +++|++|++++|++.+.+|..+ ..+++|++|+|++|++++.+|..+.++++
T Consensus 365 ~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 443 (768)
T 3rgz_A 365 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL-SNCSELVSLHLSFNYLSGTIPSSLGSLSK 443 (768)
T ss_dssp HHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGG-GGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHH-hcCCCCCEEECcCCcccCcccHHHhcCCC
Confidence 998 9999999999999988888877 8899999999999988888765 47899999999999999999999999999
Q ss_pred CCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCC-CCccccccccccccccEeeccCCCCCCCCCccccCcccccc
Q 048205 390 LSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSS-TSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSME 468 (1027)
Q Consensus 390 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~ 468 (1027)
|++|++++|++++.+|..|+.+++|++|+|++|+++.. |.. +..+++|++|+|++|++++.+|.+++.++ .++
T Consensus 444 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-----l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~ 517 (768)
T 3rgz_A 444 LRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSG-----LSNCTNLNWISLSNNRLTGEIPKWIGRLE-NLA 517 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGG-----GGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCC
T ss_pred CCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHH-----HhcCCCCCEEEccCCccCCcCChHHhcCC-CCC
Confidence 99999999999999999999999999999999999853 433 35789999999999999999999999875 699
Q ss_pred eeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeec----------------------------
Q 048205 469 DFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSL---------------------------- 520 (1027)
Q Consensus 469 ~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L---------------------------- 520 (1027)
.|++++|.++|.+|..++++++|++|++++|+++|.+|..+..+..+..+++
T Consensus 518 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (768)
T 3rgz_A 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597 (768)
T ss_dssp EEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECT
T ss_pred EEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999998877665554443
Q ss_pred ------------------cCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEccc
Q 048205 521 ------------------KDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLS 582 (1027)
Q Consensus 521 ------------------s~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 582 (1027)
+.|.++| .+|..+..+++|++|||++|.++|.+|.++++++.|+.|||+
T Consensus 598 ~~~~~~~~~l~~~~~~~l~~~~~~g-------------~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 598 GIRSEQLNRLSTRNPCNITSRVYGG-------------HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TCCGGGGGGGGGTCCSCTTSCEEEE-------------ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred cccchhhhccccccccccccceecc-------------cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 3344443 456678889999999999999999999999999999999999
Q ss_pred ccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCC-CCCC
Q 048205 583 INNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNK-LEGE 661 (1027)
Q Consensus 583 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~-l~g~ 661 (1027)
+|+++|.+|.+|+++++|+.|||++|+++|.||..++.+++|++|||++|+|+|.||.. +.+..+....+.+|+ |+|.
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SSGGGSCGGGGCSCTEEEST
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hhhccCCHHHhcCCchhcCC
Confidence 99999999999999999999999999999999999999999999999999999999965 445566677788885 8885
Q ss_pred C
Q 048205 662 I 662 (1027)
Q Consensus 662 ~ 662 (1027)
+
T Consensus 744 ~ 744 (768)
T 3rgz_A 744 P 744 (768)
T ss_dssp T
T ss_pred C
Confidence 3
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7.4e-62 Score=601.35 Aligned_cols=591 Identities=22% Similarity=0.254 Sum_probs=367.7
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
+.+++++++++ .+|..+. +++++|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 34555555555 4554443 45555555555555444445555555555555555555555555555555555555555
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIP 188 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 188 (1027)
+++ .++...+.++++|++|+|++|++++..+..|.++++|++|++++|.+++..|..|+++++|++|++++|++++..+
T Consensus 84 ~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 84 ELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred ccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 555 3444445555566666666666655555666666666666666666666666666666677777777776665555
Q ss_pred hhcc--CCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEec
Q 048205 189 EELG--NLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLS 266 (1027)
Q Consensus 189 ~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls 266 (1027)
..+. .+++|++|++++|.+++..|..|..+.+|+.|++++|.+.+.... .++... ..+.|+.|+++
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~----------~~~~~l--~~~~L~~L~L~ 230 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE----------KLCLEL--ANTSIRNLSLS 230 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHH----------HHHHHH--TTSCCCEEECT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHH----------HHHHHh--hhccccEEEcc
Confidence 5443 346677777777777666666666666777777766665411000 001000 12456777777
Q ss_pred cccccccCCCCCCCCCCCccccCcC--CccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceE
Q 048205 267 KNMFYGEIPSDLGNCTIPKEIGNLA--KLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFL 344 (1027)
Q Consensus 267 ~N~l~~~~p~~~~~~~~p~~l~~l~--~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 344 (1027)
+|.+++..|. ++..++ +|+.|++++|+++++.|..|+.+++|++|++++|++.+..|..|.++++|++|
T Consensus 231 ~n~l~~~~~~---------~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (680)
T 1ziw_A 231 NSQLSTTSNT---------TFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYL 301 (680)
T ss_dssp TSCCCEECTT---------TTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEE
T ss_pred CCcccccChh---------HhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEE
Confidence 7766654332 333333 37777777777776666677777777777777777777777777777777777
Q ss_pred EccCcccccc-----C---CCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccC--CCCcccCCc--c
Q 048205 345 YLGSNSFFGR-----L---PSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSG--FIPNTFGNL--R 412 (1027)
Q Consensus 345 ~L~~N~l~~~-----~---~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l--~ 412 (1027)
++++|...+. + +...+..+++|++|++++|++++..+..|.++++|++|++++|.+.. +.+..|..+ +
T Consensus 302 ~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~ 381 (680)
T 1ziw_A 302 NLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHS 381 (680)
T ss_dssp ECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTS
T ss_pred eccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccC
Confidence 7776544321 1 22234456666666666666666666666666666666666665432 222333333 3
Q ss_pred cccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCC-ccccCcccccceeecCCCccccccCccccccccc
Q 048205 413 NLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILP-RVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNL 491 (1027)
Q Consensus 413 ~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L 491 (1027)
+|+.|++++|+++.++.. .+..+++|++|++++|++++.+| ..+.+++ .++++++++|.+.+..|..+..+++|
T Consensus 382 ~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~~L 456 (680)
T 1ziw_A 382 PLHILNLTKNKISKIESD----AFSWLGHLEVLDLGLNEIGQELTGQEWRGLE-NIFEIYLSYNKYLQLTRNSFALVPSL 456 (680)
T ss_dssp CCCEEECTTSCCCEECTT----TTTTCTTCCEEECCSSCCEEECCSGGGTTCT-TCCEEECCSCSEEECCTTTTTTCTTC
T ss_pred cCceEECCCCCCCeEChh----hhhCCCCCCEEeCCCCcCccccCcccccCcc-cccEEecCCCCcceeChhhhhcCccc
Confidence 566666666666654332 22456666666666666654333 4454443 46666666666666666666667777
Q ss_pred ceEEecCcccc--CchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCc---
Q 048205 492 IAIYLGVNKLN--GSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPL--- 566 (1027)
Q Consensus 492 ~~L~L~~N~l~--~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~--- 566 (1027)
+.|++++|+++ +.+|..|.++++|++|+|++|++++.. |..+.++++|++|++++|.+++..
T Consensus 457 ~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~-------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 523 (680)
T 1ziw_A 457 QRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIN-------------DDMLEGLEKLEILDLQHNNLARLWKHA 523 (680)
T ss_dssp CEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCC-------------TTTTTTCTTCCEEECCSSCCGGGGSTT
T ss_pred ccchhccccccccccCCcccccCCCCCEEECCCCCCCcCC-------------hhhhccccccCEEeCCCCCccccchhh
Confidence 77777777665 456666777777777777777764321 223556667777777777766531
Q ss_pred -----cccccCcccccEEcccccccccccch-hhccCccccEEEccCCccccCccccccccccccccccccccccCCchh
Q 048205 567 -----PLEIGNLKVLVQIDLSINNFSDVIPT-TIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPI 640 (1027)
Q Consensus 567 -----p~~~~~l~~L~~L~ls~n~l~~~~p~-~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~ 640 (1027)
+..++.+++|+.|+|++|+++. +|. .|+++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..|.
T Consensus 524 ~~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~ 602 (680)
T 1ziw_A 524 NPGGPIYFLKGLSHLHILNLESNGFDE-IPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 602 (680)
T ss_dssp STTSCCCTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHH
T ss_pred ccCCcchhhcCCCCCCEEECCCCCCCC-CCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChh
Confidence 1236778888888888888874 554 588888888888888888854444567888888888888888888887
Q ss_pred hhh-cccCCcceeccCCCCCCCCC
Q 048205 641 SLE-KLLDLKDINVSFNKLEGEIP 663 (1027)
Q Consensus 641 ~l~-~l~~L~~l~l~~N~l~g~~p 663 (1027)
.+. .+++|+.+++++|++....+
T Consensus 603 ~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 603 VFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp HHHHHHTTCSEEECTTCCCCBCCC
T ss_pred HhcccccccCEEEccCCCcccCCc
Confidence 777 78888888888888877654
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.2e-61 Score=594.57 Aligned_cols=597 Identities=22% Similarity=0.201 Sum_probs=507.0
Q ss_pred CcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccC
Q 048205 4 LEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQN 83 (1027)
Q Consensus 4 l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~ 83 (1027)
-+.++.++++++ .+|..+. +++++|+|++|.+++..+..++.+++|++|+|++|++++..|+.|+++++|++|+|++
T Consensus 6 ~~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 82 (680)
T 1ziw_A 6 HEVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQH 82 (680)
T ss_dssp SSEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCS
T ss_pred CCeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCC
Confidence 367899999998 5777665 7899999999999977777899999999999999999988899999999999999999
Q ss_pred cccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccccc
Q 048205 84 NFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDI 163 (1027)
Q Consensus 84 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (1027)
|.+++..+..|.++++|++|++++|+++ .++...+..+++|++|++++|.+++..+..|.++++|++|++++|.+++..
T Consensus 83 n~l~~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 83 NELSQLSDKTFAFCTNLTELHLMSNSIQ-KIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCCC-CCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CccCccChhhhccCCCCCEEECCCCccC-ccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 9999666668999999999999999997 566677889999999999999999999999999999999999999999777
Q ss_pred Ccccc--CCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCcccc---CCCCCCEEEccCccCCCCCCcc
Q 048205 164 PKEIG--NLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIF---NLSSLSDLELSFNSLTGNFPKD 238 (1027)
Q Consensus 164 p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~ 238 (1027)
+..+. .+++|++|++++|++++..|..|..+.+|+.|++++|.+.......+. ..++|+.|++++|.+++..|.
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~- 240 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNT- 240 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTT-
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChh-
Confidence 76654 568999999999999999999999999999999999988643222221 358999999999999854443
Q ss_pred hhhhhhccccCCccccCCCc--cccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCc
Q 048205 239 MHIVNRLSAELPAKFCNNIP--FLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHN 316 (1027)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 316 (1027)
.+..++ +|++|++++|++++.. |..++.+++|++|++++|++++..|..|.++++
T Consensus 241 --------------~~~~l~~~~L~~L~Ls~n~l~~~~---------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (680)
T 1ziw_A 241 --------------TFLGLKWTNLTMLDLSYNNLNVVG---------NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFN 297 (680)
T ss_dssp --------------TTGGGGGSCCCEEECTTSCCCEEC---------TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTT
T ss_pred --------------HhhccCcCCCCEEECCCCCcCccC---------cccccCcccccEeeCCCCccCccChhhhcCCCC
Confidence 333443 4999999999998633 455778899999999999999999999999999
Q ss_pred ccceeccCccccc---------ccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCc--Cccccc
Q 048205 317 LEWMIFSFNKLVG---------VVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGT--IPSFIF 385 (1027)
Q Consensus 317 L~~L~Ls~N~l~~---------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~ 385 (1027)
|+.|++++|...+ +....|..+++|++|++++|++.+ ++...+..+++|++|+|++|.+... .+..|.
T Consensus 298 L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~ 376 (680)
T 1ziw_A 298 VRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPG-IKSNMFTGLINLKYLSLSNSFTSLRTLTNETFV 376 (680)
T ss_dssp CCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCC-CCTTTTTTCTTCCEEECTTCBSCCCEECTTTTG
T ss_pred ccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCC-CChhHhccccCCcEEECCCCchhhhhcchhhhc
Confidence 9999999876542 223378899999999999999975 5555567899999999999986432 223343
Q ss_pred CC--CCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCC-CCCccccccccccccccEeeccCCCCCCCCCccccC
Q 048205 386 NT--SKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTS-STSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGN 462 (1027)
Q Consensus 386 ~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 462 (1027)
.+ ++|+.|++++|+++++.|..|..+++|++|+|++|+++. ++. ..+..+++|++|++++|++.++.+.+|..
T Consensus 377 ~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~----~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 452 (680)
T 1ziw_A 377 SLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTG----QEWRGLENIFEIYLSYNKYLQLTRNSFAL 452 (680)
T ss_dssp GGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCS----GGGTTCTTCCEEECCSCSEEECCTTTTTT
T ss_pred ccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCc----ccccCcccccEEecCCCCcceeChhhhhc
Confidence 33 589999999999999999999999999999999999874 332 23467899999999999999999999988
Q ss_pred cccccceeecCCCccc--cccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCcccccc
Q 048205 463 LSQSMEDFHMPNSNIS--GSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLT 540 (1027)
Q Consensus 463 l~~~l~~l~l~~n~~~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~ 540 (1027)
++ .++.+++++|.+. +.+|..++++++|++|++++|++++..+..|+++++|++|+|++|++++..+..+. .
T Consensus 453 ~~-~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----~ 526 (680)
T 1ziw_A 453 VP-SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANP-----G 526 (680)
T ss_dssp CT-TCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTST-----T
T ss_pred Cc-ccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhcc-----C
Confidence 75 6999999999987 67999999999999999999999998889999999999999999999764332111 0
Q ss_pred ccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccc-
Q 048205 541 SIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIG- 619 (1027)
Q Consensus 541 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~- 619 (1027)
..+..+.++++|++|+|++|.++...+..|+.+++|+.|||++|++++..|..|.++++|+.|+|++|++++..|..++
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 1123478899999999999999954445699999999999999999976666689999999999999999987777777
Q ss_pred ccccccccccccccccCCch
Q 048205 620 DMINLKSLNLSNNNLFGIIP 639 (1027)
Q Consensus 620 ~l~~L~~L~l~~N~l~~~~p 639 (1027)
.+++|+.|+|++|++...-+
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCC
T ss_pred cccccCEEEccCCCcccCCc
Confidence 89999999999999986543
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.7e-58 Score=559.66 Aligned_cols=544 Identities=20% Similarity=0.209 Sum_probs=317.2
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
+.++.++..++ .+|..+. +.+++|+|++|.|++..|..|+.+++|++|+|++|++++..|+.|+++++|++|+|++|
T Consensus 15 ~~~~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n 91 (606)
T 3t6q_A 15 KTYNCENLGLN-EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN 91 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ceEECCCCCcc-cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC
Confidence 45666666666 4555554 35777777777777666667777777777777777777666777777777777777777
Q ss_pred ccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccC
Q 048205 85 FLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIP 164 (1027)
Q Consensus 85 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 164 (1027)
++++..|..|.++++|++|++++|+++ .+....+..+++|++|++++|++++...+.+..+++|++|++++|.+++..|
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~n~i~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 92 PLIFMAETALSGPKALKHLFFIQTGIS-SIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp CCSEECTTTTSSCTTCCEEECTTSCCS-CGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred cccccChhhhcccccccEeeccccCcc-cCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 777666667777777777777777776 3334445666667777777776665444444556667777777766666556
Q ss_pred ccccCCCCCc--EEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhh
Q 048205 165 KEIGNLTKLK--YLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIV 242 (1027)
Q Consensus 165 ~~~~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 242 (1027)
..|+.+++|+ .|++++|++++..|..|.. .+|+.|++++|. .++..+.++.+++...+..+.+.+...
T Consensus 171 ~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~------ 240 (606)
T 3t6q_A 171 EDMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDD------ 240 (606)
T ss_dssp HHHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCC------
T ss_pred hhhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccc------
Confidence 6666666666 6666666666555544433 456666666664 233444445554444444333321100
Q ss_pred hhccccCCccccCCCc--cccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccce
Q 048205 243 NRLSAELPAKFCNNIP--FLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWM 320 (1027)
Q Consensus 243 ~~~~~~l~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 320 (1027)
..++...+..+. .|+.|++++|.+++. .+..|..+++|++|++++|+++ .+|..+..+++|++|
T Consensus 241 ----~~i~~~~~~~l~~~~L~~L~l~~n~l~~~---------~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L 306 (606)
T 3t6q_A 241 ----EDISPAVFEGLCEMSVESINLQKHYFFNI---------SSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKL 306 (606)
T ss_dssp ----CCCCGGGGGGGGGSEEEEEECTTCCCSSC---------CTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEE
T ss_pred ----cccChhHhchhhcCceeEEEeecCccCcc---------CHHHhccccCCCEEeccCCccC-CCChhhcccccCCEE
Confidence 122223333332 456666666666531 1223455556666666666665 344555566666666
Q ss_pred eccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcC--cccccCCCCCCeeecCCC
Q 048205 321 IFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTI--PSFIFNTSKLSTLELQRN 398 (1027)
Q Consensus 321 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N 398 (1027)
++++|++.+..|..+.++++|++|++++|.+.+.+|...+..+++|++|++++|++++.. +..+.++++|++|++++|
T Consensus 307 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 386 (606)
T 3t6q_A 307 VLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYN 386 (606)
T ss_dssp ECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSC
T ss_pred ECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCC
Confidence 666666665555556666666666666665555555554555555666666555555433 444555555555555555
Q ss_pred cccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccc
Q 048205 399 SFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNIS 478 (1027)
Q Consensus 399 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~ 478 (1027)
++.+..|..|..+++|++|++++|+++. ..
T Consensus 387 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------------------~~---------------------- 416 (606)
T 3t6q_A 387 EPLSLKTEAFKECPQLELLDLAFTRLKV----------------------------KD---------------------- 416 (606)
T ss_dssp SCEEECTTTTTTCTTCSEEECTTCCEEC----------------------------CT----------------------
T ss_pred cCCcCCHHHhcCCccCCeEECCCCcCCC----------------------------cc----------------------
Confidence 5555555555555555555555554321 11
Q ss_pred cccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecC
Q 048205 479 GSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLS 558 (1027)
Q Consensus 479 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls 558 (1027)
.+..++.+++|++|++++|++++..|..++++++|++|+|++|++++...
T Consensus 417 --~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~---------------------------- 466 (606)
T 3t6q_A 417 --AQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNI---------------------------- 466 (606)
T ss_dssp --TCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEE----------------------------
T ss_pred --cchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcccc----------------------------
Confidence 11235556666667777776666666667777777777777777643110
Q ss_pred CCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCc
Q 048205 559 LNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGII 638 (1027)
Q Consensus 559 ~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~ 638 (1027)
..+..++.+++|+.|++++|++++..|..|+++++|++|+|++|++++.+|..++.+++| .|+|++|++++.+
T Consensus 467 ------~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~ 539 (606)
T 3t6q_A 467 ------QKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIIL 539 (606)
T ss_dssp ------CSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCC
T ss_pred ------ccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccC
Confidence 112334455555555555555555555556666666666666666665555566666666 6666666666555
Q ss_pred hhhhhcccCCcceeccCCCCCCCCC
Q 048205 639 PISLEKLLDLKDINVSFNKLEGEIP 663 (1027)
Q Consensus 639 p~~l~~l~~L~~l~l~~N~l~g~~p 663 (1027)
|..+..+++|+.+++++|++.+..+
T Consensus 540 ~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 540 PSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp GGGHHHHHTSSEEECTTCCEECSGG
T ss_pred HhhcccCCCCCEEeCCCCCccccCC
Confidence 5556666666666666666655443
No 6
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.9e-57 Score=548.82 Aligned_cols=538 Identities=20% Similarity=0.174 Sum_probs=295.6
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
+.++.++++++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 34555555555 3444333 55666666666665555555666666666666666665555555666666666666666
Q ss_pred ccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCc-cCcccccCCCCCcEEEccCCcccccc
Q 048205 85 FLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDG-KIPSTLLRCKHLQTLSLSINDFSGDI 163 (1027)
Q Consensus 85 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (1027)
.+++..|..|.++++|++|++++|++++ ++...+..+++|++|++++|++++ .+|..|.++++|++|++++|.+++..
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLAS-LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCC-SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcCCcccCCEEEccCCcccc-ccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 6655555556666666666666665552 232334455555555555555543 23555555555555555555555444
Q ss_pred CccccCCCCCc----EEEccCccCCCCCChhccCCCCCCeeeccccccC-CCCCccccCCCCCCEEEccCccCCCCCCcc
Q 048205 164 PKEIGNLTKLK----YLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLT-GTIPPSIFNLSSLSDLELSFNSLTGNFPKD 238 (1027)
Q Consensus 164 p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 238 (1027)
|..|+.+++|+ +|++++|.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+...-
T Consensus 170 ~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l- 247 (606)
T 3vq2_A 170 VNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL- 247 (606)
T ss_dssp TTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC-
T ss_pred hhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc-
Confidence 44444444333 45555555553333333332 4555555555544 23344444555555555444433210000
Q ss_pred hhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceec-cCccccccCCccccCcCcc
Q 048205 239 MHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDL-QFNRLQCVIPHEIDNLHNL 317 (1027)
Q Consensus 239 ~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L-~~N~l~~~~~~~~~~l~~L 317 (1027)
..++. ..+..+..+ +++.+++ ..|.+.+..|. +..+++|
T Consensus 248 --------~~~~~------------------------------~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l~~L 287 (606)
T 3vq2_A 248 --------EIFEP------------------------------SIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCLANV 287 (606)
T ss_dssp --------SCCCG------------------------------GGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGGTTC
T ss_pred --------cccCh------------------------------HHhhhhhhc-cHhheeccccccccccccc-cccCCCC
Confidence 00000 011111111 3344444 44555554444 5555555
Q ss_pred cceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCC
Q 048205 318 EWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQR 397 (1027)
Q Consensus 318 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 397 (1027)
+.|++++|.+..+ | .+..+++|++|++++|.+ +.+|.. .+++|++|++++|+..+.+ .+..+++|++|++++
T Consensus 288 ~~L~l~~~~~~~l-~-~l~~~~~L~~L~l~~n~l-~~lp~~---~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 359 (606)
T 3vq2_A 288 SAMSLAGVSIKYL-E-DVPKHFKWQSLSIIRCQL-KQFPTL---DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSR 359 (606)
T ss_dssp SEEEEESCCCCCC-C-CCCTTCCCSEEEEESCCC-SSCCCC---CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCS
T ss_pred CEEEecCccchhh-h-hccccccCCEEEcccccC-cccccC---CCCccceeeccCCcCccch--hhccCCCCCEEECcC
Confidence 5555555555433 2 455555555555555555 455522 4555555555555433222 344555555555555
Q ss_pred CcccCC--CCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCC
Q 048205 398 NSFSGF--IPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNS 475 (1027)
Q Consensus 398 N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n 475 (1027)
|++++. .|..+..+++|++|++++|.++.+
T Consensus 360 n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~------------------------------------------------ 391 (606)
T 3vq2_A 360 NALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM------------------------------------------------ 391 (606)
T ss_dssp SCEEEEEECCHHHHCCSCCCEEECCSCSEEEE------------------------------------------------
T ss_pred CccCCCcchhhhhccCCcccEeECCCCccccc------------------------------------------------
Confidence 555543 244555555555555555554332
Q ss_pred ccccccCcccccccccceEEecCccccCchh-HhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccE
Q 048205 476 NISGSIPKEINNLTNLIAIYLGVNKLNGSIL-IALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILC 554 (1027)
Q Consensus 476 ~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~ 554 (1027)
|..++.+++|++|++++|++.+..| ..+.++++|++|++++|++.+. .|..+.++++|++
T Consensus 392 ------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------~~~~~~~l~~L~~ 452 (606)
T 3vq2_A 392 ------SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKID-------------FDGIFLGLTSLNT 452 (606)
T ss_dssp ------CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEEC-------------CTTTTTTCTTCCE
T ss_pred ------hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCcc-------------chhhhcCCCCCCE
Confidence 2334445555555555555555544 4555666666666666665432 2334555566666
Q ss_pred EecCCCcccc-CccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccccccccccc
Q 048205 555 LNLSLNFFTG-PLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNN 633 (1027)
Q Consensus 555 L~Ls~N~l~~-~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~ 633 (1027)
|++++|.+++ .+|..++.+++|+.|++++|++++.+|..|+++++|++|+|++|++++.+|..++.+++|+.|+|++|+
T Consensus 453 L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 532 (606)
T 3vq2_A 453 LKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNR 532 (606)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCc
Confidence 6666666665 356667777777777777777777777777777777777777777777667777777777777777777
Q ss_pred ccCCchhhhhccc-CCcceeccCCCCCCCCCC
Q 048205 634 LFGIIPISLEKLL-DLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 634 l~~~~p~~l~~l~-~L~~l~l~~N~l~g~~p~ 664 (1027)
++ .+|..+..++ +|+.+++++|++.+..|.
T Consensus 533 l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 533 IE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred Cc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 77 5666677776 477777777777765553
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.7e-56 Score=540.59 Aligned_cols=517 Identities=19% Similarity=0.172 Sum_probs=420.9
Q ss_pred CCCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEc
Q 048205 2 SNLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWL 81 (1027)
Q Consensus 2 ~~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L 81 (1027)
+.+++|++++|.+++..|.+|.++++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|+++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999999999999999999999999999888999999999999999999999899999999999999999
Q ss_pred cCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCc--EEEccCCcc
Q 048205 82 QNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQ--TLSLSINDF 159 (1027)
Q Consensus 82 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~--~L~Ls~N~l 159 (1027)
++|++++..+..+.++++|++|++++|++++..... +..+++|++|++++|.+++..+..|..+++|+ .|++++|.+
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPK-GFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCT-TCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCccc-ccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 999999877889999999999999999998533333 34499999999999999999999999999999 999999999
Q ss_pred ccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccC-----CCCCccccCCC--CCCEEEccCccCC
Q 048205 160 SGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLT-----GTIPPSIFNLS--SLSDLELSFNSLT 232 (1027)
Q Consensus 160 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~--~L~~L~Ls~N~l~ 232 (1027)
++..|..|.. .+|++|++++|. ..+..+..+..+....+.-+.+. ...+..|.++. +|+.|++++|.++
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~ 267 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFF 267 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCS
T ss_pred CccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccC
Confidence 9877777765 689999999997 34556666666555444433332 12233444443 7899999999997
Q ss_pred CCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCcccc
Q 048205 233 GNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEID 312 (1027)
Q Consensus 233 ~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 312 (1027)
.++...+..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+.
T Consensus 268 ---------------~~~~~~~~~l~~L~~L~l~~n~l~----------~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 322 (606)
T 3t6q_A 268 ---------------NISSNTFHCFSGLQELDLTATHLS----------ELPSGLVGLSTLKKLVLSANKFENLCQISAS 322 (606)
T ss_dssp ---------------SCCTTTTTTCTTCSEEECTTSCCS----------CCCSSCCSCTTCCEEECTTCCCSBGGGGCGG
T ss_pred ---------------ccCHHHhccccCCCEEeccCCccC----------CCChhhcccccCCEEECccCCcCcCchhhhh
Confidence 556667788999999999999998 5677788899999999999999999899999
Q ss_pred CcCcccceeccCccccccc-CccccccCCcceEEccCccccccCC-CCccCCCCCccEEEccccccCCcCcccccCCCCC
Q 048205 313 NLHNLEWMIFSFNKLVGVV-PTTIFNVSTLKFLYLGSNSFFGRLP-SSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKL 390 (1027)
Q Consensus 313 ~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 390 (1027)
.+++|+.|++++|.+.+.. +..+.++++|++|++++|.+.+... ...+..+++|++|++++|++.+..|..+.++++|
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 402 (606)
T 3t6q_A 323 NFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQL 402 (606)
T ss_dssp GCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTC
T ss_pred ccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccC
Confidence 9999999999999998544 4568999999999999999975541 3345678999999999999998889999999999
Q ss_pred CeeecCCCcccCCCCcc-cCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccce
Q 048205 391 STLELQRNSFSGFIPNT-FGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMED 469 (1027)
Q Consensus 391 ~~L~L~~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~ 469 (1027)
++|++++|++++..|.. |..+++|++|++++|.++..
T Consensus 403 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------------------------ 440 (606)
T 3t6q_A 403 ELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDIS------------------------------------------ 440 (606)
T ss_dssp SEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTT------------------------------------------
T ss_pred CeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCc------------------------------------------
Confidence 99999999999876654 88899999999988886543
Q ss_pred eecCCCccccccCcccccccccceEEecCccccCc---hhHhhhcccccceeeccCceeecccCCCCCccccccccCccc
Q 048205 470 FHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGS---ILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTL 546 (1027)
Q Consensus 470 l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l 546 (1027)
.|..++.+++|++|++++|++++. .+..+..+++|++|+|++|+++
T Consensus 441 -----------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~-------------------- 489 (606)
T 3t6q_A 441 -----------SEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLS-------------------- 489 (606)
T ss_dssp -----------CTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCC--------------------
T ss_pred -----------CHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccC--------------------
Confidence 233444455566666666665542 1234666666666666666653
Q ss_pred cccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccc
Q 048205 547 WNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKS 626 (1027)
Q Consensus 547 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~ 626 (1027)
+..|..++.+++|+.||+++|++++.+|..++.++.| +|+|++|++++.+|..++.+++|+.
T Consensus 490 -----------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~ 551 (606)
T 3t6q_A 490 -----------------SIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRT 551 (606)
T ss_dssp -----------------EECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSE
T ss_pred -----------------ccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCE
Confidence 3345556667777777777777777777778888888 8888888888767777778888888
Q ss_pred cccccccccCCch
Q 048205 627 LNLSNNNLFGIIP 639 (1027)
Q Consensus 627 L~l~~N~l~~~~p 639 (1027)
|+|++|++++..+
T Consensus 552 L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 552 INLRQNPLDCTCS 564 (606)
T ss_dssp EECTTCCEECSGG
T ss_pred EeCCCCCccccCC
Confidence 8888888876554
No 8
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-55 Score=537.88 Aligned_cols=522 Identities=22% Similarity=0.187 Sum_probs=427.7
Q ss_pred CCCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEc
Q 048205 2 SNLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWL 81 (1027)
Q Consensus 2 ~~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L 81 (1027)
+++++|++++|.+++..+.+|.++++|++|+|++|.+++..|..|+.+++|++|+|++|++++..|+.|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999998889999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCc----EEEccCC
Q 048205 82 QNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQ----TLSLSIN 157 (1027)
Q Consensus 82 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~Ls~N 157 (1027)
++|.+++..+..++++++|++|++++|++++...+..+.++++|++|++++|++++..+..|..+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 999999887789999999999999999998533356788999999999999999999898888887765 8999999
Q ss_pred ccccccCccccCCCCCcEEEccCccCC-CCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCC
Q 048205 158 DFSGDIPKEIGNLTKLKYLHLDQNRLQ-GEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFP 236 (1027)
Q Consensus 158 ~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 236 (1027)
.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++..+.+.+.. .+..+ ....+.
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~--------~l~~~--~~~~~~---- 256 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDER--------NLEIF--EPSIME---- 256 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSC--------CCSCC--CGGGGT----
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCC--------ccccc--ChHHhh----
Confidence 9997666666655 9999999999997 466788999999999999877665321 11111 011110
Q ss_pred cchhhhhhccccCCccccCCCccccEEEe-ccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcC
Q 048205 237 KDMHIVNRLSAELPAKFCNNIPFLEEIYL-SKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLH 315 (1027)
Q Consensus 237 ~~~~~~~~~~~~l~~~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 315 (1027)
. . ..+ .++.+++ ..|.+.+.+ |. +..+++|+.|++++|.+..+ | .+..++
T Consensus 257 -----------~----l-~~l-~l~~l~l~~~~~~~~~~---------~~-~~~l~~L~~L~l~~~~~~~l-~-~l~~~~ 307 (606)
T 3vq2_A 257 -----------G----L-CDV-TIDEFRLTYTNDFSDDI---------VK-FHCLANVSAMSLAGVSIKYL-E-DVPKHF 307 (606)
T ss_dssp -----------T----G-GGS-EEEEEEECCCTTCCGGG---------GS-CGGGTTCSEEEEESCCCCCC-C-CCCTTC
T ss_pred -----------h----h-hhc-cHhheeccccccccccc---------cc-cccCCCCCEEEecCccchhh-h-hccccc
Confidence 0 0 011 3566666 566666533 33 66778888888888888754 4 788888
Q ss_pred cccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCc--CcccccCCCCCCee
Q 048205 316 NLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGT--IPSFIFNTSKLSTL 393 (1027)
Q Consensus 316 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L 393 (1027)
+|+.|++++|++ +.+| .+ .+++|++|++++|+..+.+ .+..+++|++|+|++|++++. +|..+..+++|++|
T Consensus 308 ~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~---~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L 381 (606)
T 3vq2_A 308 KWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF---KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHL 381 (606)
T ss_dssp CCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC---CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEE
T ss_pred cCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccch---hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEe
Confidence 899999999998 4556 44 8899999999999665554 334789999999999999865 38889999999999
Q ss_pred ecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecC
Q 048205 394 ELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMP 473 (1027)
Q Consensus 394 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~ 473 (1027)
++++|.+++ +|..|..+++|++|++++|+++..+.
T Consensus 382 ~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~-------------------------------------------- 416 (606)
T 3vq2_A 382 DLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTE-------------------------------------------- 416 (606)
T ss_dssp ECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTT--------------------------------------------
T ss_pred ECCCCcccc-chhhccCCCCCCeeECCCCccCCccC--------------------------------------------
Confidence 999999986 56889999999999999888653221
Q ss_pred CCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCccc
Q 048205 474 NSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDIL 553 (1027)
Q Consensus 474 ~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~ 553 (1027)
...++++++|++|++++|++++..|..++++++|++|+|++|++++. .+|..+..+++|+
T Consensus 417 --------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------~~~~~~~~l~~L~ 476 (606)
T 3vq2_A 417 --------FSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN------------TLSNVFANTTNLT 476 (606)
T ss_dssp --------TTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG------------EECSCCTTCTTCC
T ss_pred --------hhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCc------------chHHhhccCCCCC
Confidence 03455566777777777777777777778888888888888888542 2456677888888
Q ss_pred EEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccc-cccccccccc
Q 048205 554 CLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMI-NLKSLNLSNN 632 (1027)
Q Consensus 554 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~-~L~~L~l~~N 632 (1027)
.|++++|.+++..|..++.+++|+.|++++|++++.+|..|+++++|++|+|++|+++ .+|..+..++ +|++|++++|
T Consensus 477 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N 555 (606)
T 3vq2_A 477 FLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNN 555 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSC
T ss_pred EEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCC
Confidence 9999999889888889999999999999999999988999999999999999999999 7999899987 6999999999
Q ss_pred cccCCch
Q 048205 633 NLFGIIP 639 (1027)
Q Consensus 633 ~l~~~~p 639 (1027)
++.+..+
T Consensus 556 ~~~c~c~ 562 (606)
T 3vq2_A 556 SVACICE 562 (606)
T ss_dssp CCCCSST
T ss_pred CcccCCc
Confidence 9987655
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-55 Score=550.95 Aligned_cols=539 Identities=22% Similarity=0.198 Sum_probs=324.1
Q ss_pred EEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeC-cccccCCCCCCEEEccCc
Q 048205 6 YLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEI-PEELGNLAELEELWLQNN 84 (1027)
Q Consensus 6 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~-p~~l~~l~~L~~L~L~~N 84 (1027)
..+.++++++ .+|. ..++|++|||++|.|++..|..++.+++|++|+|++|...+.+ |..|+++++|++|+|++|
T Consensus 8 ~~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N 83 (844)
T 3j0a_A 8 IAFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS 83 (844)
T ss_dssp EEEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC
T ss_pred EEEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC
Confidence 4555666666 3443 3356666666666666555666666666666666666433333 556666666666666666
Q ss_pred ccCCccCccccCCCCCCeEeCCcccccccch-hhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccccc
Q 048205 85 FLTGTIPSSIFNLSSLSNLDLSVNNLTGELL-ANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDI 163 (1027)
Q Consensus 85 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (1027)
.+++..|..|.++++|++|+|++|++++.++ ... |..+++|++|+|++|.+++..
T Consensus 84 ~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~------------------------~~~L~~L~~L~Ls~N~l~~~~ 139 (844)
T 3j0a_A 84 KIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGY------------------------FRNLKALTRLDLSKNQIRSLY 139 (844)
T ss_dssp CCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCC------------------------CSSCSSCCEEEEESCCCCCCC
T ss_pred cCcccCHhHccCCcccCEeeCcCCCCCcccccCcc------------------------ccccCCCCEEECCCCcccccc
Confidence 6665556666666666666666666654222 122 445555555555555554432
Q ss_pred C-ccccCCCCCcEEEccCccCCCCCChhccCC--CCCCeeeccccccCCCCCccccCCCC------CCEEEccCccCCCC
Q 048205 164 P-KEIGNLTKLKYLHLDQNRLQGEIPEELGNL--AELEKLQLQNNFLTGTIPPSIFNLSS------LSDLELSFNSLTGN 234 (1027)
Q Consensus 164 p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~ 234 (1027)
+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|++++|.+.+..|..+..+.+ |+.|++++|.+++.
T Consensus 140 ~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~ 219 (844)
T 3j0a_A 140 LHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVD 219 (844)
T ss_dssp CCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTT
T ss_pred cchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchh
Confidence 2 345555555555555555555555555544 55555555555555555544444433 66666666666544
Q ss_pred CCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCc
Q 048205 235 FPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNL 314 (1027)
Q Consensus 235 ~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 314 (1027)
.+..+.. . -....++.+.++.+.+.. .+..|++....+..|.++
T Consensus 220 ~~~~~~~------~------l~~~~l~~L~l~~~~~~~------------------------~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 220 ITGNFSN------A------ISKSQAFSLILAHHIMGA------------------------GFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp TTSGGGG------T------SCSCCBSEEECCSSCCBC------------------------SSSCSSSTTGGGTTTTTT
T ss_pred HHHHHHh------h------cCcccccceecccccccc------------------------cccccccCCCChhhhhcc
Confidence 4332210 0 011335555555333221 111222222223333333
Q ss_pred --CcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCe
Q 048205 315 --HNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLST 392 (1027)
Q Consensus 315 --~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 392 (1027)
++|+.|++++|.+.+..+..|..+++|+.|+|++|++.+..| ..+..+++|++|+|++|++++..|..|.++++|+.
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIAD-EAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECT-TTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCCh-HHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 455555555555555555555556666666666665543333 23345666666666666666666666666777777
Q ss_pred eecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeec
Q 048205 393 LELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHM 472 (1027)
Q Consensus 393 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l 472 (1027)
|++++|++.++.+..|..+++|++|+|++|.++.++. ++.|+.|++++|+++.++..
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~---------~~~L~~L~l~~N~l~~l~~~-------------- 399 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF---------IPSIPDIFLSGNKLVTLPKI-------------- 399 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS---------CCSCSEEEEESCCCCCCCCC--------------
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC---------CCCcchhccCCCCccccccc--------------
Confidence 7777777766666667777777777777777665432 45566677777766533211
Q ss_pred CCCccccccCcccccccccceEEecCccccCc-hhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCc
Q 048205 473 PNSNISGSIPKEINNLTNLIAIYLGVNKLNGS-ILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKD 551 (1027)
Q Consensus 473 ~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~ 551 (1027)
..+++.|++++|++++. .+..+.++++|++|+|++|++++..+. ..+..+++
T Consensus 400 ---------------~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~------------~~~~~~~~ 452 (844)
T 3j0a_A 400 ---------------NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGD------------QTPSENPS 452 (844)
T ss_dssp ---------------CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSS------------SSSCSCTT
T ss_pred ---------------ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccc------------cccccCCc
Confidence 12455555666665543 223455677777777777776543221 11233566
Q ss_pred ccEEecCCCccc-----cCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccc
Q 048205 552 ILCLNLSLNFFT-----GPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKS 626 (1027)
Q Consensus 552 L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~ 626 (1027)
|+.|+|++|.++ +..|..+..+++|+.|+|++|++++.+|..|+++++|+.|+|++|+|++..|..+. ++|+.
T Consensus 453 L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~ 530 (844)
T 3j0a_A 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEI 530 (844)
T ss_dssp CCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCE
T ss_pred cccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccE
Confidence 777777777776 44556788899999999999999988888899999999999999999965555554 88999
Q ss_pred cccccccccCCchhhhhcccCCcceeccCCCCCCCCCC
Q 048205 627 LNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 627 L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~ 664 (1027)
|||++|+|+|.+|..+ .+|+.+++++|++....+.
T Consensus 531 L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 531 LDISRNQLLAPNPDVF---VSLSVLDITHNKFICECEL 565 (844)
T ss_dssp EEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSC
T ss_pred EECCCCcCCCCChhHh---CCcCEEEecCCCccccccc
Confidence 9999999999998765 4788999999999876653
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2e-53 Score=535.94 Aligned_cols=542 Identities=23% Similarity=0.260 Sum_probs=398.4
Q ss_pred EEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCc
Q 048205 55 LHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENN 134 (1027)
Q Consensus 55 L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 134 (1027)
.+.++++++ .+|. -.++|++|+|++|.|++..|..|.++++|++|+|++|...+.+++..+.++++|++|+|++|.
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 344444444 3443 224455555555555544455555555555555555544444444555555566666666666
Q ss_pred CCccCcccccCCCCCcEEEccCCccccccCcc--ccCCCCCcEEEccCccCCCCCC-hhccCCCCCCeeeccccccCCCC
Q 048205 135 FDGKIPSTLLRCKHLQTLSLSINDFSGDIPKE--IGNLTKLKYLHLDQNRLQGEIP-EELGNLAELEKLQLQNNFLTGTI 211 (1027)
Q Consensus 135 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 211 (1027)
+.+..|..|.++++|++|+|++|.+++..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 66677888889999999999999998755554 8899999999999999987655 57889999999999999998888
Q ss_pred CccccCC--CCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccC
Q 048205 212 PPSIFNL--SSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGN 289 (1027)
Q Consensus 212 p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~ 289 (1027)
+..+..+ ++|+.|++++|.+++..|..+.. .+. .+.. ..|+.|++++|.+++.+|..+.. .+ .
T Consensus 165 ~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~-------~~~-~~~~-~~L~~L~Ls~n~l~~~~~~~~~~-----~l-~ 229 (844)
T 3j0a_A 165 EHELEPLQGKTLSFFSLAANSLYSRVSVDWGK-------CMN-PFRN-MVLEILDVSGNGWTVDITGNFSN-----AI-S 229 (844)
T ss_dssp SGGGHHHHHCSSCCCEECCSBSCCCCCCCCCS-------SSC-TTTT-CCBSEEBCSSCCSSTTTTSGGGG-----TS-C
T ss_pred HHHcccccCCccceEECCCCccccccccchhh-------cCC-cccc-CceeEEecCCCcCchhHHHHHHh-----hc-C
Confidence 8888877 88899999999888655543210 000 1111 24777888888777655543321 11 1
Q ss_pred cCCccceeccCccccccCCccccCcCcccceeccCcccccccCcccccc--CCcceEEccCccccccCCCCccCCCCCcc
Q 048205 290 LAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNV--STLKFLYLGSNSFFGRLPSSADVRLPNLE 367 (1027)
Q Consensus 290 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 367 (1027)
..+++.|.++.+.+.. .++.|.+.+..+..|.++ ++|+.|++++|.+.+. +...+..+++|+
T Consensus 230 ~~~l~~L~l~~~~~~~---------------~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~ 293 (844)
T 3j0a_A 230 KSQAFSLILAHHIMGA---------------GFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSL-NSRVFETLKDLK 293 (844)
T ss_dssp SCCBSEEECCSSCCBC---------------SSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEE-CSCCSSSCCCCC
T ss_pred cccccceecccccccc---------------cccccccCCCChhhhhccccCCccEEECCCCccccc-ChhhhhcCCCCC
Confidence 2456666666443321 223455555556666665 6788899988888644 444456788889
Q ss_pred EEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeec
Q 048205 368 ELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSI 447 (1027)
Q Consensus 368 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~L 447 (1027)
+|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|+++.++.. .+..+++|++|+|
T Consensus 294 ~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~----~~~~l~~L~~L~L 369 (844)
T 3j0a_A 294 VLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQ----TFKFLEKLQTLDL 369 (844)
T ss_dssp EEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSS----CSCSCCCCCEEEE
T ss_pred EEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChh----hhcCCCCCCEEEC
Confidence 999998888888888888888889999999888888888888888888888888888776654 2356788888888
Q ss_pred cCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeec
Q 048205 448 SNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEG 527 (1027)
Q Consensus 448 s~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g 527 (1027)
++|.++++ ..+++|+.|++++|+++. +|.. ..+++.|++++|++++
T Consensus 370 s~N~l~~i------------------------------~~~~~L~~L~l~~N~l~~-l~~~---~~~l~~L~ls~N~l~~ 415 (844)
T 3j0a_A 370 RDNALTTI------------------------------HFIPSIPDIFLSGNKLVT-LPKI---NLTANLIHLSENRLEN 415 (844)
T ss_dssp ETCCSCCC------------------------------SSCCSCSEEEEESCCCCC-CCCC---CTTCCEEECCSCCCCS
T ss_pred CCCCCCcc------------------------------cCCCCcchhccCCCCccc-cccc---ccccceeecccCcccc
Confidence 88887632 125678899999999983 4433 5689999999999964
Q ss_pred ccCCCCCccccccccCccccccCcccEEecCCCccccCccc-cccCcccccEEcccccccc-----cccchhhccCcccc
Q 048205 528 SIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPL-EIGNLKVLVQIDLSINNFS-----DVIPTTIGGLKDLQ 601 (1027)
Q Consensus 528 ~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~n~l~-----~~~p~~~~~l~~L~ 601 (1027)
. ..+..++++++|+.|+|++|.+++..+. .+..+++|+.|++++|.++ +..|..|+++++|+
T Consensus 416 l------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 483 (844)
T 3j0a_A 416 L------------DILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQ 483 (844)
T ss_dssp S------------TTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEE
T ss_pred C------------chhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccccc
Confidence 2 1233456889999999999999975443 4567899999999999997 44567799999999
Q ss_pred EEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCcccccccCCcc
Q 048205 602 YLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFKGNEL 681 (1027)
Q Consensus 602 ~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~ 681 (1027)
.|+|++|+|++.+|..++.+++|+.|+|++|+|++..|..+. ++|+.|++++|+++|.+|. .|.++....+.||+.
T Consensus 484 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 484 VLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKF 559 (844)
T ss_dssp CCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECC
T ss_pred EEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChh--HhCCcCEEEecCCCc
Confidence 999999999988888899999999999999999988777766 8999999999999999996 466777778889988
Q ss_pred ccCC
Q 048205 682 LCGM 685 (1027)
Q Consensus 682 l~g~ 685 (1027)
.|.-
T Consensus 560 ~C~c 563 (844)
T 3j0a_A 560 ICEC 563 (844)
T ss_dssp CCSS
T ss_pred cccc
Confidence 8843
No 11
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.2e-51 Score=494.73 Aligned_cols=519 Identities=21% Similarity=0.216 Sum_probs=308.7
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
+.++.++..++ .+|..+. +++++|+|++|++++..+.+|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 86 (570)
T 2z63_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 86 (570)
T ss_dssp TEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred cEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC
Confidence 34555555555 4554443 34555555555555555555555555555555555555544555555555555555555
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccc-ccCccccCCCCCcEEEccCccCCCCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSG-DIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
+++ .++...+.++++|++|++++|++++..+..|.++++|++|++++|.+++ .+|..|+++++|++|++++|++++..
T Consensus 87 ~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 87 PIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp CCC-EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred cCC-ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 554 2333444555555555555555554444455666666666666666654 24556666666666666666666555
Q ss_pred ChhccCCCCC----CeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEE
Q 048205 188 PEELGNLAEL----EKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEI 263 (1027)
Q Consensus 188 p~~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L 263 (1027)
+..++.+.+| +.|++++|.+++..|..|..+ +|+.|++++|..... .+ ...+..++.++.+
T Consensus 166 ~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~-------------~~-~~~~~~l~~l~~~ 230 (570)
T 2z63_A 166 CTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLN-------------VM-KTCIQGLAGLEVH 230 (570)
T ss_dssp GGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTT-------------HH-HHHHHTTTTCEEE
T ss_pred HHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEeccccccccc-------------ch-hhhhcCcccccee
Confidence 5555555555 556666666665444444443 566666665543210 00 0111223333333
Q ss_pred EeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcC--cccceeccCc-ccccccCccccccCC
Q 048205 264 YLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLH--NLEWMIFSFN-KLVGVVPTTIFNVST 340 (1027)
Q Consensus 264 ~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~Ls~N-~l~~~~~~~~~~l~~ 340 (1027)
.+..+.+.. ... +..+....+..+. .++.+++++| .+.+..|..+..+++
T Consensus 231 ~l~~~~~~~-----------------~~~----------l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~ 283 (570)
T 2z63_A 231 RLVLGEFRN-----------------EGN----------LEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTN 283 (570)
T ss_dssp EEEEEECCC-----------------CSS----------CEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTT
T ss_pred eeccccccC-----------------chh----------hhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCc
Confidence 332222210 000 0111111122221 1333444444 444444444444445
Q ss_pred cceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecC
Q 048205 341 LKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLG 420 (1027)
Q Consensus 341 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 420 (1027)
|++|++++|.+. .+|.... .+ +|++|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+
T Consensus 284 L~~L~l~~~~l~-~l~~~~~-~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~--------- 346 (570)
T 2z63_A 284 VSSFSLVSVTIE-RVKDFSY-NF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDL--------- 346 (570)
T ss_dssp CSEEEEESCEEC-SCCBCCS-CC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBC---------
T ss_pred ccEEEecCccch-hhhhhhc-cC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccC---------
Confidence 555555444443 2333322 22 4444444444444 2332 2344444444444444433222 333
Q ss_pred CCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCcc
Q 048205 421 DNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNK 500 (1027)
Q Consensus 421 ~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~ 500 (1027)
++|++|++++|++++. +..|..+..+++|++|++++|+
T Consensus 347 -------------------~~L~~L~l~~n~l~~~-----------------------~~~~~~~~~~~~L~~L~l~~n~ 384 (570)
T 2z63_A 347 -------------------PSLEFLDLSRNGLSFK-----------------------GCCSQSDFGTTSLKYLDLSFNG 384 (570)
T ss_dssp -------------------TTCCEEECCSSCCBEE-----------------------EEEEHHHHTCSCCCEEECCSCS
T ss_pred -------------------CCCCEEeCcCCccCcc-----------------------ccccccccccCccCEEECCCCc
Confidence 4444444444444311 1124556667777888888887
Q ss_pred ccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEc
Q 048205 501 LNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQID 580 (1027)
Q Consensus 501 l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 580 (1027)
+++..+. +.++++|++|++++|++.+..| +..+.++++|++|++++|.+++..|..++.+++|+.|+
T Consensus 385 l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 385 VITMSSN-FLGLEQLEHLDFQHSNLKQMSE------------FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp EEEEEEE-EETCTTCCEEECTTSEEESCTT------------SCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred ccccccc-ccccCCCCEEEccCCccccccc------------hhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 7765444 8888888888888888865432 13466788899999999999988899999999999999
Q ss_pred ccccccc-cccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCC
Q 048205 581 LSINNFS-DVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 581 ls~n~l~-~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 659 (1027)
+++|+++ +.+|..++.+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|+.|++++|+++
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 9999998 679999999999999999999999888999999999999999999999998888999999999999999999
Q ss_pred CCCCCC
Q 048205 660 GEIPRE 665 (1027)
Q Consensus 660 g~~p~~ 665 (1027)
|.+|..
T Consensus 532 ~~~~~~ 537 (570)
T 2z63_A 532 CSCPRI 537 (570)
T ss_dssp CCTTTT
T ss_pred CCCcch
Confidence 998864
No 12
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-50 Score=489.78 Aligned_cols=518 Identities=21% Similarity=0.198 Sum_probs=372.5
Q ss_pred CcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccC
Q 048205 4 LEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQN 83 (1027)
Q Consensus 4 l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~ 83 (1027)
.+.++-++.+++ .+|..+. +++++|+|++|.+++..+..|..+++|++|+|++|++++..|+.|+++++|++|+|++
T Consensus 9 ~~~~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~ 85 (570)
T 2z63_A 9 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (570)
T ss_dssp TTEEECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CcEEEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcC
Confidence 356777888888 5676554 6899999999999988888999999999999999999988889999999999999999
Q ss_pred cccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCcc-CcccccCCCCCcEEEccCCccccc
Q 048205 84 NFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGK-IPSTLLRCKHLQTLSLSINDFSGD 162 (1027)
Q Consensus 84 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (1027)
|++++..|..|..+++|++|++++|+++ .++...+..+++|++|++++|.+++. +|..|.++++|++|++++|.+++.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCC-CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEE
T ss_pred CcCCccCHhhhcCccccccccccccccc-cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcccee
Confidence 9999888899999999999999999998 45555588999999999999999874 689999999999999999999988
Q ss_pred cCccccCCCCC----cEEEccCccCCCCCChhccCCCCCCeeeccccccCC-CCCccccCCCCCCEEEccCccCCCCCCc
Q 048205 163 IPKEIGNLTKL----KYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTG-TIPPSIFNLSSLSDLELSFNSLTGNFPK 237 (1027)
Q Consensus 163 ~p~~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 237 (1027)
.+..|+.+++| +.|++++|.+++..|..|... +|++|++++|.... .++..+.++++++.+.+..+.+...-.
T Consensus 165 ~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~- 242 (570)
T 2z63_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN- 242 (570)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSS-
T ss_pred cHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchh-
Confidence 88899999998 899999999998888888776 89999999986542 345677888888888776655431100
Q ss_pred chhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCc-cccccCCccccCcCc
Q 048205 238 DMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFN-RLQCVIPHEIDNLHN 316 (1027)
Q Consensus 238 ~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~ 316 (1027)
...++...+..++. + .++.+++++| .+.+..|..|..+++
T Consensus 243 --------l~~~~~~~~~~l~~------------------------------l-~l~~l~l~~~~~~~~~~~~~~~~l~~ 283 (570)
T 2z63_A 243 --------LEKFDKSALEGLCN------------------------------L-TIEEFRLAYLDYYLDDIIDLFNCLTN 283 (570)
T ss_dssp --------CEECCTTTTGGGGG------------------------------S-EEEEEEEEETTEEESCSTTTTGGGTT
T ss_pred --------hhhcchhhhccccc------------------------------c-chhhhhhhcchhhhhhchhhhcCcCc
Confidence 00112111211111 1 2445555555 555555666666666
Q ss_pred ccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecC
Q 048205 317 LEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQ 396 (1027)
Q Consensus 317 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 396 (1027)
|+.|++++|.+.+ .|..+..+ +|++|++++|.+. .+|.. .+++|++|++++|.+.+..+. ..+++|++|+++
T Consensus 284 L~~L~l~~~~l~~-l~~~~~~~-~L~~L~l~~n~~~-~l~~~---~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~ 355 (570)
T 2z63_A 284 VSSFSLVSVTIER-VKDFSYNF-GWQHLELVNCKFG-QFPTL---KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLS 355 (570)
T ss_dssp CSEEEEESCEECS-CCBCCSCC-CCSEEEEESCBCS-SCCBC---BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECC
T ss_pred ccEEEecCccchh-hhhhhccC-CccEEeeccCccc-ccCcc---cccccCEEeCcCCcccccccc--ccCCCCCEEeCc
Confidence 6666666666663 45555556 6777777777664 45542 456777777777777655444 567777777777
Q ss_pred CCcccCCC--CcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCC
Q 048205 397 RNSFSGFI--PNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPN 474 (1027)
Q Consensus 397 ~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~ 474 (1027)
+|++++.. |..+..+++|++|++++|.++.++.. +..+++|++|++++|++++.++
T Consensus 356 ~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-----~~~l~~L~~L~l~~n~l~~~~~----------------- 413 (570)
T 2z63_A 356 RNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-----FLGLEQLEHLDFQHSNLKQMSE----------------- 413 (570)
T ss_dssp SSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-----EETCTTCCEEECTTSEEESCTT-----------------
T ss_pred CCccCccccccccccccCccCEEECCCCcccccccc-----ccccCCCCEEEccCCccccccc-----------------
Confidence 77776543 56666777777777777765543322 1233444444444443332211
Q ss_pred CccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccE
Q 048205 475 SNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILC 554 (1027)
Q Consensus 475 n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~ 554 (1027)
+..+.++++|++|++++|++++..|..|.+ +++|++
T Consensus 414 -------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-------------------------------------l~~L~~ 449 (570)
T 2z63_A 414 -------FSVFLSLRNLIYLDISHTHTRVAFNGIFNG-------------------------------------LSSLEV 449 (570)
T ss_dssp -------SCTTTTCTTCCEEECTTSCCEECCTTTTTT-------------------------------------CTTCCE
T ss_pred -------hhhhhcCCCCCEEeCcCCcccccchhhhhc-------------------------------------CCcCcE
Confidence 022334444555555555544444444444 445555
Q ss_pred EecCCCccc-cCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccccccccccc
Q 048205 555 LNLSLNFFT-GPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNN 633 (1027)
Q Consensus 555 L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~ 633 (1027)
|++++|.++ +.+|..++.+++|+.|++++|++++..|..|+.+++|++|+|++|++++..|..++.+++|+.|++++|+
T Consensus 450 L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 529 (570)
T 2z63_A 450 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNP 529 (570)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCc
Confidence 555555554 4567777788888888888888887778888888888888888888887666778888888888888888
Q ss_pred ccCCchh
Q 048205 634 LFGIIPI 640 (1027)
Q Consensus 634 l~~~~p~ 640 (1027)
+++..|.
T Consensus 530 ~~~~~~~ 536 (570)
T 2z63_A 530 WDCSCPR 536 (570)
T ss_dssp BCCCTTT
T ss_pred ccCCCcc
Confidence 8887764
No 13
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.3e-51 Score=448.76 Aligned_cols=254 Identities=30% Similarity=0.449 Sum_probs=213.3
Q ss_pred CCCCccceeeccccceEEEEEec------CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|.+.+.||+|+||+||+|++. +++.||||+++.......+.|.+|++++++++|||||+++++|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45778899999999999999864 478899999987666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCC------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 048205 824 VLEYMPYGSLEKCLYSSN------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHL 891 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 891 (1027)
|||||++|+|.++++..+ ..++|.++..|+.|||+||+||| +++||||||||+|||++.++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 46899999999999999999999 899999999999999999999999
Q ss_pred eeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHH
Q 048205 892 SDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 892 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
+|||+|+.....+.........||+.|||||++.+..++.++|||||||++|||+| |+.||...... .+...+
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i---- 243 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECI---- 243 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHH----
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH----
Confidence 99999987654443334445579999999999999999999999999999999999 89999764321 111111
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... ....+..++.++.+|+.+||+.||++|||++||.+.|+
T Consensus 244 -------~~~~-------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 244 -------TQGR-------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp -------HHTC-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HcCC-------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111 11223467888999999999999999999999998876
No 14
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.5e-51 Score=450.95 Aligned_cols=254 Identities=28% Similarity=0.449 Sum_probs=206.2
Q ss_pred CCCCccceeeccccceEEEEEec------CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|...+.||+|+||+||+|+++ +++.||||+++.......+.|.+|++++++++|||||+++++|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478899999987666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCC--------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 048205 824 VLEYMPYGSLEKCLYSSN--------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 889 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 889 (1027)
|||||++|+|.++++... ..++|.++..|+.|||+||+||| +++||||||||+|||++.++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999987542 35899999999999999999999 8999999999999999999999
Q ss_pred EEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHH
Q 048205 890 HLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVND 968 (1027)
Q Consensus 890 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 968 (1027)
||+|||+|+.+...+........+||+.|||||++.+..++.++|||||||++|||+| |+.||......+ ....
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~--~~~~--- 272 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE--AIDC--- 272 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH--HHHH---
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH--HHHH---
Confidence 9999999997654444444455679999999999999999999999999999999999 899997643211 1111
Q ss_pred HHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 969 LLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 969 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+... .+...+..+++++.+|+.+||+.||++||||+||++.|+
T Consensus 273 ---------i~~g------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 273 ---------ITQG------RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp ---------HHHT------CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred ---------HHcC------CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1010 112234567888999999999999999999999999886
No 15
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=441.07 Aligned_cols=257 Identities=28% Similarity=0.416 Sum_probs=204.8
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecc--cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQ--YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|+..+.||+|+||+||+|++++ .||||+++.. ..+..+.|.+|++++++++|||||+++++|.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4568888999999999999998763 5999998643 23456789999999999999999999999865 56899999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
||+||+|.++++..+..+++.++..|+.|||+||+||| +++||||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887777999999999999999999999 899999999999999999999999999999876543333
Q ss_pred ceecccccCccccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 907 LTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
......+||+.|||||++.+ ++|+.++|||||||++|||+||+.||........ +... +.....
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~-~~~~------------~~~~~~ 255 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFM------------VGRGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHH------------HHTTCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHH-HHHH------------HhcCCC
Confidence 34455689999999999863 4689999999999999999999999976432211 1111 111110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. ......+..++.++.+|+.+||+.||++||||+||++.|+
T Consensus 256 ~--p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 256 S--PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp C--CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred C--CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 0 0011223467888999999999999999999999998875
No 16
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=7e-51 Score=445.09 Aligned_cols=254 Identities=24% Similarity=0.415 Sum_probs=212.3
Q ss_pred CCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 751 GFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
+++..+.||+|+||+||+|++. +++.||||+++... ....+.|.+|++++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3566789999999999999863 46789999986443 3345789999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc
Q 048205 824 VLEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV 888 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~ 888 (1027)
|||||++|+|.+++.... ..++|.++..|+.|||+||+||| +++||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 999999999999996532 35899999999999999999999 999999999999999999999
Q ss_pred EEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHH
Q 048205 889 AHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVN 967 (1027)
Q Consensus 889 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 967 (1027)
+||+|||+|+.+...+........+||+.|||||++.++.++.++|||||||++|||+| |+.||.+.... .+...
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~-- 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEM-- 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHH--
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHH--
Confidence 99999999997655444444455689999999999999999999999999999999999 89999764321 11111
Q ss_pred HHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 968 DLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 968 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
+... ...+.+..++.++.+|+.+||+.||++||||+||++.|++
T Consensus 260 ----------i~~~------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 260 ----------IRNR------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp ----------HHTT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----------HHcC------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1111 1112345688889999999999999999999999999975
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-49 Score=479.10 Aligned_cols=473 Identities=18% Similarity=0.182 Sum_probs=319.5
Q ss_pred CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeec
Q 048205 123 PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQL 202 (1027)
Q Consensus 123 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 202 (1027)
++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|+|
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 105 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNL 105 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEEC
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEEC
Confidence 34555555555555566667777777777777777777666677777777777777777777666666777777777777
Q ss_pred cccccCCC-CCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCC
Q 048205 203 QNNFLTGT-IPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNC 281 (1027)
Q Consensus 203 ~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 281 (1027)
++|.+++. .|..+.++++|++|++++|++.+ .+|...+..+++|++|++++|.+++.
T Consensus 106 s~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~--------------~~~~~~~~~l~~L~~L~L~~n~l~~~-------- 163 (549)
T 2z81_A 106 MGNPYQTLGVTSLFPNLTNLQTLRIGNVETFS--------------EIRRIDFAGLTSLNELEIKALSLRNY-------- 163 (549)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC--------------EECTTTTTTCCEEEEEEEEETTCCEE--------
T ss_pred CCCcccccchhhhhhccCCccEEECCCCcccc--------------ccCHhhhhcccccCeeeccCCccccc--------
Confidence 77777753 45667777777777777776432 23333444555555555555555542
Q ss_pred CCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccC
Q 048205 282 TIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADV 361 (1027)
Q Consensus 282 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 361 (1027)
+|..++.+++|++|++++|.+.......+..+++|++|++++|++++... .|.....
T Consensus 164 -~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~----------------------~~~~~~~ 220 (549)
T 2z81_A 164 -QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQF----------------------SPLPVDE 220 (549)
T ss_dssp -CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCC----------------------CCCSSCC
T ss_pred -ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccc----------------------cccchhh
Confidence 22334444555555555555543222222334444444444444443210 0122222
Q ss_pred CCCCccEEEccccccCCcCc----ccccCCCCCCeeecCCCcccCCC------CcccCCcccccEEecCCCCCCCCCCcc
Q 048205 362 RLPNLEELSLSGNNFSGTIP----SFIFNTSKLSTLELQRNSFSGFI------PNTFGNLRNLKWLDLGDNYLTSSTSEL 431 (1027)
Q Consensus 362 ~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~~~~l 431 (1027)
.+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. ...+..+++|+.|++++|.+.......
T Consensus 221 ~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~ 300 (549)
T 2z81_A 221 VSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFY 300 (549)
T ss_dssp CCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSC
T ss_pred hhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcc
Confidence 34556666666665554322 22344556666666666665431 123455666777777777655432110
Q ss_pred ccc-cccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccC---cccccccccceEEecCccccCchh-
Q 048205 432 SFL-SSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIP---KEINNLTNLIAIYLGVNKLNGSIL- 506 (1027)
Q Consensus 432 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~- 506 (1027)
..- .....+.|++|++++|.++.++...+..+ ..++.|++++|.+.+.+| ..++.+++|++|++++|++++..+
T Consensus 301 ~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 379 (549)
T 2z81_A 301 DLSTVYSLLEKVKRITVENSKVFLVPCSFSQHL-KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKT 379 (549)
T ss_dssp CCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHC-TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHH
T ss_pred cchhhhhhcccceEEEeccCccccCCHHHHhcC-ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccc
Confidence 000 01224567777777777765544433333 357777777787877664 447889999999999999997654
Q ss_pred -HhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccc
Q 048205 507 -IALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINN 585 (1027)
Q Consensus 507 -~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~ 585 (1027)
..+..+++|++|+|++|+++ .+|..++.+++|++|++++|.+++ +|..+ .++|+.||+++|+
T Consensus 380 ~~~~~~l~~L~~L~Ls~N~l~--------------~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~ 442 (549)
T 2z81_A 380 GEILLTLKNLTSLDISRNTFH--------------PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNN 442 (549)
T ss_dssp HHHGGGCTTCCEEECTTCCCC--------------CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSC
T ss_pred hhhhhcCCCCCEEECCCCCCc--------------cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCC
Confidence 67999999999999999984 567788889999999999999985 66554 3689999999999
Q ss_pred cccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCC
Q 048205 586 FSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 586 l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~ 664 (1027)
+++.+ +.+++|++|+|++|+|+ .||+ .+.+++|++|+|++|++++.+|..+..+++|+.|++++|++.+..|.
T Consensus 443 l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 443 LDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred hhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99743 67899999999999999 7987 57899999999999999999999999999999999999999998874
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=4.2e-50 Score=483.48 Aligned_cols=495 Identities=18% Similarity=0.155 Sum_probs=262.4
Q ss_pred EecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCccc
Q 048205 7 LFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFL 86 (1027)
Q Consensus 7 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l 86 (1027)
.|.++++++ .+|..+. ++|++|+|++|++++..|..++.+++|++|+|++|++++..|+.|+++++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 444444444 3333332 4455555555555444444455555555555555555444444445555555555555555
Q ss_pred CCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCc-cccccCc
Q 048205 87 TGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSIND-FSGDIPK 165 (1027)
Q Consensus 87 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~ 165 (1027)
++..|..|+++++|++|++++|++++. ..|..|.++++|++|++++|. +....+.
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~------------------------~~~~~~~~l~~L~~L~L~~n~~~~~~~~~ 142 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTL------------------------GVTSLFPNLTNLQTLRIGNVETFSEIRRI 142 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSS------------------------CSSCSCTTCTTCCEEEEEESSSCCEECTT
T ss_pred CccCHHHhccCCCCcEEECCCCccccc------------------------chhhhhhccCCccEEECCCCccccccCHh
Confidence 444444444444444444444444421 123445555555555555554 2222223
Q ss_pred cccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccc-cCCCCCCEEEccCccCCCCCCcchhhhhh
Q 048205 166 EIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSI-FNLSSLSDLELSFNSLTGNFPKDMHIVNR 244 (1027)
Q Consensus 166 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~ 244 (1027)
.|.++++|++|++++|++++..|..++.+++|++|++++|.+. .+|..+ ..+++|++|++++|++++..
T Consensus 143 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~--------- 212 (549)
T 2z81_A 143 DFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQ--------- 212 (549)
T ss_dssp TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCC---------
T ss_pred hhhcccccCeeeccCCcccccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCcccccc---------
Confidence 4555555555555555555545555555555555555555554 223222 33555555555555554211
Q ss_pred ccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccC
Q 048205 245 LSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSF 324 (1027)
Q Consensus 245 ~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 324 (1027)
..+......++.|+.|++++|.+++..+. .++..+..+++|+.+++++|.+.+...-..
T Consensus 213 ---~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-----~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------- 271 (549)
T 2z81_A 213 ---FSPLPVDEVSSPMKKLAFRGSVLTDESFN-----ELLKLLRYILELSEVEFDDCTLNGLGDFNP------------- 271 (549)
T ss_dssp ---CCCCSSCCCCCCCCEEEEESCEEEHHHHH-----HHHGGGGGCTTCCEEEEESCEEECCSCCCC-------------
T ss_pred ---ccccchhhhhhcccceeccccccchhHHH-----HHHHHhhhhccccccccccccccccccccc-------------
Confidence 00111222334455555555554432221 112223344455555555555443211000
Q ss_pred cccccccCccccccCCcceEEccCccccccCC----CCccCCCCCccEEEccccccCCcCcccc-cCCCCCCeeecCCCc
Q 048205 325 NKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLP----SSADVRLPNLEELSLSGNNFSGTIPSFI-FNTSKLSTLELQRNS 399 (1027)
Q Consensus 325 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~ 399 (1027)
.....+..+.+|+.|++.++.+..... ...+...++|++|++++|++. .+|..+ .++++|++|+|++|+
T Consensus 272 -----~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~ 345 (549)
T 2z81_A 272 -----SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENL 345 (549)
T ss_dssp -----CTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSC
T ss_pred -----cchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCc
Confidence 000112233344444444443321100 000112356788888888876 566555 467888888888888
Q ss_pred ccCCCC---cccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCc
Q 048205 400 FSGFIP---NTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSN 476 (1027)
Q Consensus 400 l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~ 476 (1027)
+++..| ..++.+++|++|+|++|++++++..-. .+..+++|++|++++|+++
T Consensus 346 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~--~~~~l~~L~~L~Ls~N~l~----------------------- 400 (549)
T 2z81_A 346 MVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE--ILLTLKNLTSLDISRNTFH----------------------- 400 (549)
T ss_dssp CCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHH--HGGGCTTCCEEECTTCCCC-----------------------
T ss_pred cccccccchhhhhccccCcEEEccCCcccccccchh--hhhcCCCCCEEECCCCCCc-----------------------
Confidence 876553 347778888888888888765432100 1233445555555555443
Q ss_pred cccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEe
Q 048205 477 ISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLN 556 (1027)
Q Consensus 477 ~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~ 556 (1027)
.+|..+..+++|++|+|++|++++ +|..+ .++|++|+
T Consensus 401 ---------------------------~lp~~~~~~~~L~~L~Ls~N~l~~--------------l~~~~--~~~L~~L~ 437 (549)
T 2z81_A 401 ---------------------------PMPDSCQWPEKMRFLNLSSTGIRV--------------VKTCI--PQTLEVLD 437 (549)
T ss_dssp ---------------------------CCCSCCCCCTTCCEEECTTSCCSC--------------CCTTS--CTTCSEEE
T ss_pred ---------------------------cCChhhcccccccEEECCCCCccc--------------ccchh--cCCceEEE
Confidence 223333334445555555555421 11111 13567777
Q ss_pred cCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccC
Q 048205 557 LSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFG 636 (1027)
Q Consensus 557 Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~ 636 (1027)
+++|++++.+ +.+++|++|||++|+++ .+|. .+.+++|++|+|++|++++.+|..++.+++|+.|+|++|++++
T Consensus 438 Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 511 (549)
T 2z81_A 438 VSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 511 (549)
T ss_dssp CCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCC
T ss_pred CCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccC
Confidence 7777777632 46788999999999998 6787 5778999999999999998778889999999999999999998
Q ss_pred Cch
Q 048205 637 IIP 639 (1027)
Q Consensus 637 ~~p 639 (1027)
..|
T Consensus 512 ~~~ 514 (549)
T 2z81_A 512 SCP 514 (549)
T ss_dssp CHH
T ss_pred CCc
Confidence 887
No 19
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.3e-50 Score=443.68 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=212.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
..|+..+.||+|+||+||+|+++ +|+.||||+++.......+.+.+|++++++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45899999999999999999976 79999999998766666677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
+||+|.+++... .+++.++..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999998764 4899999999999999999999 9999999999999999999999999999998764332 23
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccch
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDK 988 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 988 (1027)
....+||+.|||||++.+..|+.++||||+||++|||++|++||......+ .... +.+ . ...
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~-----------i~~-~----~~~ 288 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKM-----------IRD-N----LPP 288 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHH-----------HHH-S----SCC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHH-----------HHc-C----CCC
Confidence 445789999999999999999999999999999999999999997642211 1110 000 0 011
Q ss_pred hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 989 HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 989 ~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+..++.++.+|+.+||.+||++|||++|+++
T Consensus 289 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 289 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12223456778999999999999999999999986
No 20
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.9e-51 Score=494.45 Aligned_cols=382 Identities=19% Similarity=0.231 Sum_probs=231.3
Q ss_pred CCccccccCccccCCCCCcEEEccCccCCCC-----------------CChhcc--CCCCCCeeeccccccCCCCCcccc
Q 048205 156 INDFSGDIPKEIGNLTKLKYLHLDQNRLQGE-----------------IPEELG--NLAELEKLQLQNNFLTGTIPPSIF 216 (1027)
Q Consensus 156 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~ 216 (1027)
.|.+++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|+|++|.+.+.+|..|+
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 567776 777777778888888888877764 788877 888888888888888888888888
Q ss_pred CCCCCCEEEccCcc-CCC-CCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCc--cccCcCC
Q 048205 217 NLSSLSDLELSFNS-LTG-NFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPK--EIGNLAK 292 (1027)
Q Consensus 217 ~l~~L~~L~Ls~N~-l~~-~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~--~l~~l~~ 292 (1027)
++++|++|++++|+ ++| .+|..+..+. .+..+++|++|++++|+++ .+|. .++.+++
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~---------~~~~l~~L~~L~L~~n~l~----------~ip~~~~l~~l~~ 331 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALA---------DAPVGEKIQIIYIGYNNLK----------TFPVETSLQKMKK 331 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHH---------HSGGGGTCCEEECCSSCCS----------SCCCHHHHTTCTT
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhh---------ccccCCCCCEEECCCCcCC----------ccCchhhhccCCC
Confidence 88888888888887 775 4554433211 1122355666666666665 3444 5566666
Q ss_pred ccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCC-cceEEccCccccccCCCCccC-CCCCccEEE
Q 048205 293 LEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVST-LKFLYLGSNSFFGRLPSSADV-RLPNLEELS 370 (1027)
Q Consensus 293 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~-~l~~L~~L~ 370 (1027)
|++|++++|++++.+| .|+.+++|+.|++++|+++ .+|..+.++++ |++|++++|++. .+|..+.. .+++|++|+
T Consensus 332 L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~ 408 (636)
T 4eco_A 332 LGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAID 408 (636)
T ss_dssp CCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEE
Confidence 6666666666665555 6666666666666666666 34445555555 555555555554 44433211 122455555
Q ss_pred ccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCC
Q 048205 371 LSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNN 450 (1027)
Q Consensus 371 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N 450 (1027)
|++|++++.+|..+.... .....+++|++|+|++|+++.+|..+. ..+++|++|+|++|
T Consensus 409 Ls~N~l~~~~p~~l~~~~-----------------~~~~~~~~L~~L~Ls~N~l~~lp~~~~----~~l~~L~~L~Ls~N 467 (636)
T 4eco_A 409 FSYNEIGSVDGKNFDPLD-----------------PTPFKGINVSSINLSNNQISKFPKELF----STGSPLSSINLMGN 467 (636)
T ss_dssp CCSSCTTTTTTCSSCTTC-----------------SSCCCCCCEEEEECCSSCCCSCCTHHH----HTTCCCSEEECCSS
T ss_pred CcCCcCCCcchhhhcccc-----------------cccccCCCCCEEECcCCccCcCCHHHH----ccCCCCCEEECCCC
Confidence 555555544444444000 000044455555555555554444322 23455555555555
Q ss_pred CCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhh--cccccceeeccCceeecc
Q 048205 451 PLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALG--KLKKLQLLSLKDNQLEGS 528 (1027)
Q Consensus 451 ~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~g~ 528 (1027)
+++.+++..+... +..+.++++|++|+|++|+++ .+|..+. .+++|++|+|++|+++
T Consensus 468 ~l~~i~~~~~~~~------------------~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~-- 526 (636)
T 4eco_A 468 MLTEIPKNSLKDE------------------NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFS-- 526 (636)
T ss_dssp CCSBCCSSSSEET------------------TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCS--
T ss_pred CCCCcCHHHhccc------------------cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCC--
Confidence 5554333322211 112334456666666666666 4555554 6666666666666663
Q ss_pred cCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCC
Q 048205 529 IPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYN 608 (1027)
Q Consensus 529 ~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N 608 (1027)
.+|..++++++|+.|+|++|+ ++++|++.+.+|..++.+++|++|+|++|
T Consensus 527 ------------~ip~~~~~l~~L~~L~Ls~N~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 576 (636)
T 4eco_A 527 ------------KFPTQPLNSSTLKGFGIRNQR------------------DAQGNRTLREWPEGITLCPSLTQLQIGSN 576 (636)
T ss_dssp ------------SCCCGGGGCSSCCEEECCSCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSS
T ss_pred ------------CcChhhhcCCCCCEEECCCCc------------------ccccCcccccChHHHhcCCCCCEEECCCC
Confidence 244455555566666665554 44677788888888888888888888888
Q ss_pred ccccCcccccccccccccccccccccc
Q 048205 609 RLQGSIPDSIGDMINLKSLNLSNNNLF 635 (1027)
Q Consensus 609 ~l~g~ip~~~~~l~~L~~L~l~~N~l~ 635 (1027)
++ +.||..+. ++|+.|||++|++.
T Consensus 577 ~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 577 DI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred cC-CccCHhHh--CcCCEEECcCCCCc
Confidence 88 47887766 68888888888664
No 21
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-50 Score=438.92 Aligned_cols=248 Identities=24% Similarity=0.359 Sum_probs=210.9
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|++.+.||+|+||+||+|++. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999975 79999999997542 334577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||++||+|.+++.+.+ .+++.++..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999997654 4899999999999999999999 99999999999999999999999999999997765444
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......+||+.|||||++.+..|+.++||||+||++|||++|++||...... .... .+.....
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-----~~~~--------~i~~~~~--- 251 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-----LIFA--------KIIKLEY--- 251 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHTCC---
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHH--------HHHcCCC---
Confidence 44556678999999999999999999999999999999999999999764221 1111 1111110
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIV 1022 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl 1022 (1027)
..+..++.++.+|+.+||.+||++|||++|++
T Consensus 252 -----~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 -----DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -----CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -----CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11234567789999999999999999998863
No 22
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.6e-50 Score=443.99 Aligned_cols=250 Identities=20% Similarity=0.322 Sum_probs=204.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|++.+.||+|+||+||+|++. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 468999999999999999999975 79999999997653 334577899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 826 EYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+||+|.+++...+ ..+++.++..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 9999999999997654 45799999999999999999999 999999999999999999999999999999865321
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.......+||+.|||||++.+..|+.++||||+||++|||+||++||...... +.+.. +......
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-----~~~~~--------i~~~~~~- 243 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-----NLVLK--------IISGSFP- 243 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-----HHHHH--------HHHTCCC-
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHH--------HHcCCCC-
Confidence 12234567999999999999999999999999999999999999999764221 11111 1111110
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+..++.++.+|+.+||.+||++|||++|+++
T Consensus 244 ------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 ------PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 112346778999999999999999999999985
No 23
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.6e-49 Score=435.83 Aligned_cols=250 Identities=23% Similarity=0.271 Sum_probs=205.8
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
+.|+..+.||+|+||+||+|+++ +|+.||||+++.+.. ..+|++++++++|||||++++++.+++..|+|||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 45778889999999999999976 699999999985432 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeecCCcccccCCCc-
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM-VAHLSDFGMAKPFLKEDQS- 906 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfgla~~~~~~~~~- 906 (1027)
+||+|.+++...+ .+++.++..++.||+.||+||| +++||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 133 ~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 133 EGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp TTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 9999999997654 4899999999999999999999 99999999999999999988 6999999999876543221
Q ss_pred --ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 907 --LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 907 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......+||+.|||||++.+..|+.++||||+||++|||+||++||........ ..... ..
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~------------~~---- 271 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIA------------SE---- 271 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHH------------HS----
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHH------------cC----
Confidence 122345799999999999999999999999999999999999999986543322 11110 00
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.......+..+++++.+++.+||++||++|||+.|+++.|.
T Consensus 272 -~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 272 -PPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp -CCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 00111223467788999999999999999999999998764
No 24
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.1e-49 Score=445.44 Aligned_cols=249 Identities=23% Similarity=0.304 Sum_probs=211.8
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
+.|+..+.||+|+||+||+|+++ +|+.||||+++.......+.+.+|++++++++|||||+++++|.+.+..|+|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 56999999999999999999976 69999999998766666677899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
+||+|.+++... .+++.++..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 999999998764 3899999999999999999999 9999999999999999999999999999998764332 23
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccch
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDK 988 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 988 (1027)
....+||+.|||||++.+..|+.++||||+||++|||++|++||......+ ....+ .... ..
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~~~i--------~~~~--------~~ 365 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AMKMI--------RDNL--------PP 365 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH--------HHSC--------CC
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HHHHH--------HcCC--------CC
Confidence 455789999999999999999999999999999999999999997642211 11100 0000 01
Q ss_pred hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 989 HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 989 ~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+..++.++.+|+.+||..||++|||+.|+++
T Consensus 366 ~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 366 RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 11222356778999999999999999999999986
No 25
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-48 Score=421.69 Aligned_cols=244 Identities=26% Similarity=0.370 Sum_probs=197.9
Q ss_pred CccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEec----CCeeEEEE
Q 048205 753 SENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSS----DDFKALVL 825 (1027)
Q Consensus 753 ~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lV~ 825 (1027)
+..+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45568999999999999976 68999999997542 3345678999999999999999999999865 34689999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEcC-CCcEEEeeecCCccccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLDD-NMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~~-~~~~kl~Dfgla~~~~~ 902 (1027)
|||+||+|.+++.+.. .+++..+..++.||+.||+||| +++ ||||||||+|||++. +|.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999997654 5899999999999999999999 877 999999999999984 79999999999985322
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
......+||+.|||||++.+ +|+.++||||+||++|||+||++||........ +... +....
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~-~~~~------------i~~~~ 246 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRR------------VTSGV 246 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHH------------HTTTC
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH-HHHH------------HHcCC
Confidence 12345689999999998865 699999999999999999999999975422111 1110 00100
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ....+..+++++.+|+.+||.+||++|||++|+++
T Consensus 247 ---~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 247 ---K--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---C--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---C--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 11122345667899999999999999999999986
No 26
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.4e-49 Score=482.32 Aligned_cols=466 Identities=18% Similarity=0.247 Sum_probs=340.2
Q ss_pred CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccc------c------ccCccccCCCCCcEEEccCccCCCCCChh
Q 048205 123 PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFS------G------DIPKEIGNLTKLKYLHLDQNRLQGEIPEE 190 (1027)
Q Consensus 123 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~------~------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 190 (1027)
.+++.|+|++|.+.|.+|.+|+.+++|++|+|++|.+. + .+|... +..|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 46778888888888888888888888888888888662 1 222222 34555 677777777666655
Q ss_pred ccCC-CCCCeeecc--------------------ccccCCCCCccccCCCCCCEEEccCccCCCC-CCcchhhhhhcccc
Q 048205 191 LGNL-AELEKLQLQ--------------------NNFLTGTIPPSIFNLSSLSDLELSFNSLTGN-FPKDMHIVNRLSAE 248 (1027)
Q Consensus 191 ~~~l-~~L~~L~L~--------------------~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~~~~~ 248 (1027)
+..+ ..+..+++. +|++++ +|..|+++++|++|+|++|+++|. ++..+
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~--------- 227 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAW--------- 227 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSC---------
T ss_pred HHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccc---------
Confidence 5421 112222222 345554 555555555555555555555431 00000
Q ss_pred CCccccCCCccccEEEeccccccccCCCCCCCCCCCcccc--CcCCccceeccCccccccCCccccCcCcccceeccCcc
Q 048205 249 LPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIG--NLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNK 326 (1027)
Q Consensus 249 l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 326 (1027)
+|. +.+...+ .+|..++ ++++|++|+|++|++.+.+|..|+++++|++|++++|+
T Consensus 228 ~~~--------------~~~~~~~---------~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 228 ENE--------------NSEYAQQ---------YKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp SCT--------------TSHHHHH---------HTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccc--------------ccchhcc---------cCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 000 0000000 1566777 88889999999999888888889999999999999998
Q ss_pred -ccc-ccCcccccc------CCcceEEccCccccccCCC-CccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCC
Q 048205 327 -LVG-VVPTTIFNV------STLKFLYLGSNSFFGRLPS-SADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQR 397 (1027)
Q Consensus 327 -l~~-~~~~~~~~l------~~L~~L~L~~N~l~~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 397 (1027)
+++ .+|..+.++ ++|++|++++|++. .+|. ..+..+++|++|+|++|+++|.+| .+.++++|++|+|++
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 887 778777776 88888888888886 6776 234578888888888888887888 888888888888888
Q ss_pred CcccCCCCcccCCccc-ccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCc
Q 048205 398 NSFSGFIPNTFGNLRN-LKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSN 476 (1027)
Q Consensus 398 N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~ 476 (1027)
|+++ .+|..|..+++ |++|++++|+++.+|..+.. ..+++|++|++++|++++..|..+....
T Consensus 363 N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~---~~l~~L~~L~Ls~N~l~~~~p~~l~~~~------------ 426 (636)
T 4eco_A 363 NQIT-EIPANFCGFTEQVENLSFAHNKLKYIPNIFDA---KSVSVMSAIDFSYNEIGSVDGKNFDPLD------------ 426 (636)
T ss_dssp SEEE-ECCTTSEEECTTCCEEECCSSCCSSCCSCCCT---TCSSCEEEEECCSSCTTTTTTCSSCTTC------------
T ss_pred Cccc-cccHhhhhhcccCcEEEccCCcCcccchhhhh---cccCccCEEECcCCcCCCcchhhhcccc------------
Confidence 8888 67778888888 88888888888877764432 2344677777777777766555443110
Q ss_pred cccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEe
Q 048205 477 ISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLN 556 (1027)
Q Consensus 477 ~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~ 556 (1027)
.....+.+|++|+|++|++++..+..+..+++|++|+|++|+++ .+|.... ...+..+.++++|+.|+
T Consensus 427 ------~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~-----~~~~~~~~~l~~L~~L~ 494 (636)
T 4eco_A 427 ------PTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSL-----KDENENFKNTYLLTSID 494 (636)
T ss_dssp ------SSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSS-----EETTEECTTGGGCCEEE
T ss_pred ------cccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHh-----ccccccccccCCccEEE
Confidence 11115678999999999999655566778999999999999996 4443221 11112233455999999
Q ss_pred cCCCccccCcccccc--CcccccEEcccccccccccchhhccCccccEEEc------cCCccccCccccccccccccccc
Q 048205 557 LSLNFFTGPLPLEIG--NLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFL------KYNRLQGSIPDSIGDMINLKSLN 628 (1027)
Q Consensus 557 Ls~N~l~~~~p~~~~--~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L------~~N~l~g~ip~~~~~l~~L~~L~ 628 (1027)
|++|.++ .+|..+. .+++|+.|+|++|++++ +|..++.+++|++|+| ++|++.+.+|..++.+++|+.|+
T Consensus 495 Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~ 572 (636)
T 4eco_A 495 LRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQ 572 (636)
T ss_dssp CCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEE
T ss_pred CcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEE
Confidence 9999999 6999887 99999999999999997 9999999999999999 56889999999999999999999
Q ss_pred cccccccCCchhhhhcccCCcceeccCCCCC
Q 048205 629 LSNNNLFGIIPISLEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 629 l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 659 (1027)
|++|++ +.+|..+. ++|+.|++++|++.
T Consensus 573 Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 573 IGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp CCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred CCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 999999 78998866 79999999999876
No 27
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.1e-48 Score=418.40 Aligned_cols=245 Identities=24% Similarity=0.359 Sum_probs=193.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|++.+.||+|+||+||+|++. +|+.||||++++.. ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999865 79999999997542 233567899999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+ +|+|.+++.... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 999 679999987654 4899999999999999999999 999999999999999999999999999999865332
Q ss_pred cceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ....... ....
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-----~~~~~~i--------~~~~--- 228 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNI--------SNGV--- 228 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH--------HHTC---
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHH--------HcCC---
Confidence 22345689999999999998876 5799999999999999999999976421 1111111 1111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++.++.+++.+||++||++|||++|+++
T Consensus 229 -----~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 229 -----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 0112345677899999999999999999999986
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-48 Score=467.11 Aligned_cols=458 Identities=21% Similarity=0.239 Sum_probs=295.9
Q ss_pred cEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeecccc
Q 048205 126 QTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNN 205 (1027)
Q Consensus 126 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 205 (1027)
++|++++|+++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 468888888884 555554 78888888888888777778888888888888888888777888888888888888888
Q ss_pred ccCCCCCccccCCCCCCEEEccCccCCC-CCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCC
Q 048205 206 FLTGTIPPSIFNLSSLSDLELSFNSLTG-NFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIP 284 (1027)
Q Consensus 206 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p 284 (1027)
+|+ .+|.. .+++|++|+|++|++++ .+| ..+..+++|++|++++|.+++
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p---------------~~~~~l~~L~~L~L~~n~l~~------------ 129 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPIC---------------KEFGNMSQLKFLGLSTTHLEK------------ 129 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCC---------------GGGGGCTTCCEEEEEESSCCG------------
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccch---------------hhhccCCcceEEEecCcccch------------
Confidence 888 45555 78888888888888864 122 234466777777777777763
Q ss_pred ccccCcCCc--cceeccCccc--cccCCccccCcC-cccceeccCcccccccC-ccccccCCcceEEccCcc-------c
Q 048205 285 KEIGNLAKL--EKLDLQFNRL--QCVIPHEIDNLH-NLEWMIFSFNKLVGVVP-TTIFNVSTLKFLYLGSNS-------F 351 (1027)
Q Consensus 285 ~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~L~~N~-------l 351 (1027)
..+..+++| +.|++++|++ .+..|..+..+. +...+++++|++.+..+ ..+.++++|+.|++++|. +
T Consensus 130 ~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 209 (520)
T 2z7x_B 130 SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYF 209 (520)
T ss_dssp GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHH
T ss_pred hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccccee
Confidence 234555666 7777777777 666666666655 33455666776655433 345667777777777775 4
Q ss_pred cccCCCCccCCCCCccEEEccccccCCcCccccc---CCCCCCeeecCCCcccCCCCccc-----CCcccccEEecCCCC
Q 048205 352 FGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIF---NTSKLSTLELQRNSFSGFIPNTF-----GNLRNLKWLDLGDNY 423 (1027)
Q Consensus 352 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~ 423 (1027)
.+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|++++|++++.+|..+ +.+++|+.+++++|.
T Consensus 210 ~~~~~--~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 210 LSILA--KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp HHHHH--GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred ecchh--hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 44444 234567777777777766543222221 13467777777777776677766 677777777777777
Q ss_pred CCCCCCc-cccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCcccc
Q 048205 424 LTSSTSE-LSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLN 502 (1027)
Q Consensus 424 l~~~~~~-l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~ 502 (1027)
+ .+|.+ +..+ ....+|+.|++++|.+..... .+.+++|++|++++|+++
T Consensus 288 ~-~~p~~~~~~~--~~~~~L~~L~l~~n~l~~~~~---------------------------~~~l~~L~~L~Ls~n~l~ 337 (520)
T 2z7x_B 288 F-GFPQSYIYEI--FSNMNIKNFTVSGTRMVHMLC---------------------------PSKISPFLHLDFSNNLLT 337 (520)
T ss_dssp C-CSCTHHHHHH--HHTCCCSEEEEESSCCCCCCC---------------------------CSSCCCCCEEECCSSCCC
T ss_pred e-ecchhhhhcc--cccCceeEEEcCCCccccccc---------------------------hhhCCcccEEEeECCccC
Confidence 6 44421 1100 011346677777766643321 134555666666666666
Q ss_pred CchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCcccc-ccCcccccEEcc
Q 048205 503 GSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLE-IGNLKVLVQIDL 581 (1027)
Q Consensus 503 ~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l 581 (1027)
+.+|..++++++|++|+|++|++++ +..+|..+..+++|++|++++|.+++.+|.. +..+++|++|++
T Consensus 338 ~~~~~~~~~l~~L~~L~L~~N~l~~-----------l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~L 406 (520)
T 2z7x_B 338 DTVFENCGHLTELETLILQMNQLKE-----------LSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406 (520)
T ss_dssp TTTTTTCCCCSSCCEEECCSSCCCB-----------HHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEEC
T ss_pred hhhhhhhccCCCCCEEEccCCccCc-----------cccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEEC
Confidence 5555566666666666666666532 1133445555666666666666666545543 556666777777
Q ss_pred cccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhh-hhcccCCcceeccCCCCCC
Q 048205 582 SINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPIS-LEKLLDLKDINVSFNKLEG 660 (1027)
Q Consensus 582 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~l~l~~N~l~g 660 (1027)
++|++++.+|..+. ++|++|+|++|+++ .+|..++.+++|++|+|++|+++ .+|.. +..+++|+.|++++|++++
T Consensus 407 s~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 407 SSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcc
Confidence 77776666666554 56677777777776 56766667777777777777776 34444 6667777777777777766
Q ss_pred CCC
Q 048205 661 EIP 663 (1027)
Q Consensus 661 ~~p 663 (1027)
..+
T Consensus 483 ~c~ 485 (520)
T 2z7x_B 483 SCP 485 (520)
T ss_dssp CHH
T ss_pred cCC
Confidence 544
No 29
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3e-48 Score=479.00 Aligned_cols=489 Identities=20% Similarity=0.220 Sum_probs=306.8
Q ss_pred CCCcEEEccccccceeCcccccCCCCCCEEEc-cCcccCCccCccccCCCCCCeEeCCcc--------------------
Q 048205 50 TTLIGLHLRGNKLQGEIPEELGNLAELEELWL-QNNFLTGTIPSSIFNLSSLSNLDLSVN-------------------- 108 (1027)
Q Consensus 50 ~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L-~~N~l~~~~p~~l~~l~~L~~L~Ls~N-------------------- 108 (1027)
..++.|+|++|.+.+.+|..|+++++|+.|+| ++|.+.|..|-..... .++++..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~----~~~l~~~~l~~lr~~~~~~~l~~~~~~ 398 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEEL----TPDMSEERKHRIRMHYKKMFLDYDQRL 398 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCC----CSSCCHHHHHHHHTHHHHHHTCCCGGG
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeeccccccccccccccccc----ccccchhHHHHHHHhhhhhhhccCcch
Confidence 46777888888888788888888888888888 7777765533221111 0111111
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccC--CccccccCccccCCCCCcEEEccCccCCC-
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSI--NDFSGDIPKEIGNLTKLKYLHLDQNRLQG- 185 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~--N~l~~~~p~~~~~l~~L~~L~L~~N~l~~- 185 (1027)
.+.+... ..+...+. ..+........++.+.+.. |.+++ +|..|+++++|++|+|++|++++
T Consensus 399 ~~s~l~~-~~l~~~~~-------------~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~ 463 (876)
T 4ecn_A 399 NLSDLLQ-DAINRNPE-------------MKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYD 463 (876)
T ss_dssp GSCHHHH-HHHHTCTT-------------SCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGG
T ss_pred hhhHHHH-HHhhhCcc-------------ccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCC
Confidence 0110000 00000000 0000111222333333333 67776 67777777777777777777776
Q ss_pred ----------------CCChhcc--CCCCCCeeeccccccCCCCCccccCCCCCCEEEccCcc-CCC-CCCcchhhhhhc
Q 048205 186 ----------------EIPEELG--NLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNS-LTG-NFPKDMHIVNRL 245 (1027)
Q Consensus 186 ----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~~~~~ 245 (1027)
.+|..++ ++++|++|+|++|.+.+.+|..|+++++|+.|+|++|+ ++| .+|..+....
T Consensus 464 ~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~-- 541 (876)
T 4ecn_A 464 NIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA-- 541 (876)
T ss_dssp GBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH--
T ss_pred cccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh--
Confidence 3788877 99999999999999988999999999999999999998 876 5665443221
Q ss_pred cccCCccccCCCccccEEEeccccccccCCCCCCCCCCCc--cccCcCCccceeccCccccccCCccccCcCcccceecc
Q 048205 246 SAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPK--EIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFS 323 (1027)
Q Consensus 246 ~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~--~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 323 (1027)
..+..+++|+.|+|++|+++ .+|. .++++++|+.|+|++|+++ .+| .|+.+++|+.|+|+
T Consensus 542 ------~~~~~l~~L~~L~Ls~N~L~----------~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 542 ------DDEDTGPKIQIFYMGYNNLE----------EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp ------HCTTTTTTCCEEECCSSCCC----------BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred ------hcccccCCccEEEeeCCcCC----------ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 12345567777777777776 4555 5667777777777777777 445 66777777777777
Q ss_pred CcccccccCccccccCC-cceEEccCccccccCCCCccCCC--CCccEEEccccccCCcCcccccCCCCCCeeecCCCcc
Q 048205 324 FNKLVGVVPTTIFNVST-LKFLYLGSNSFFGRLPSSADVRL--PNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSF 400 (1027)
Q Consensus 324 ~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 400 (1027)
+|++. .+|..+.++++ |++|+|++|++. .+|..+. .+ ++|+.|+|++|++.+.+|....
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~-~~~~~~L~~L~Ls~N~l~g~ip~l~~--------------- 665 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFN-AKSVYVMGSVDFSYNKIGSEGRNISC--------------- 665 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCC-TTCSSCEEEEECCSSCTTTTSSSCSS---------------
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhh-ccccCCCCEEECcCCcCCCccccchh---------------
Confidence 77766 45555666666 666666666664 4553321 22 2366666666666554432211
Q ss_pred cCCCCcccC--CcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccc
Q 048205 401 SGFIPNTFG--NLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNIS 478 (1027)
Q Consensus 401 ~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~ 478 (1027)
.++ .+++|+.|+|++|+|+.+|..+. ..+++|+.|+|++|+|+.+++..+..
T Consensus 666 ------~l~~~~~~~L~~L~Ls~N~L~~lp~~~~----~~l~~L~~L~Ls~N~L~~ip~~~~~~---------------- 719 (876)
T 4ecn_A 666 ------SMDDYKGINASTVTLSYNEIQKFPTELF----ATGSPISTIILSNNLMTSIPENSLKP---------------- 719 (876)
T ss_dssp ------CTTTCCCCCEEEEECCSSCCCSCCHHHH----HTTCCCSEEECCSCCCSCCCTTSSSC----------------
T ss_pred ------hhccccCCCcCEEEccCCcCCccCHHHH----ccCCCCCEEECCCCcCCccChHHhcc----------------
Confidence 111 22345555555555554444322 23455555555555555433332221
Q ss_pred cccCcccccccccceEEecCccccCchhHhhh--cccccceeeccCceeecccCCCCCccccccccCccccccCcccEEe
Q 048205 479 GSIPKEINNLTNLIAIYLGVNKLNGSILIALG--KLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLN 556 (1027)
Q Consensus 479 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~ 556 (1027)
.+...+++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|+ .+|..++++++|+.|+
T Consensus 720 --~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~--------------~lp~~l~~L~~L~~L~ 782 (876)
T 4ecn_A 720 --KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFS--------------SFPTQPLNSSQLKAFG 782 (876)
T ss_dssp --TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCS--------------SCCCGGGGCTTCCEEE
T ss_pred --ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCC--------------ccchhhhcCCCCCEEE
Confidence 1122345567777777777777 5666665 6777777777777763 2455666777777777
Q ss_pred cCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccC
Q 048205 557 LSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFG 636 (1027)
Q Consensus 557 Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~ 636 (1027)
|++|. ++++|++.+.+|..|+.+++|+.|+|++|++ +.||..+. ++|+.|||++|++..
T Consensus 783 Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 783 IRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp CCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred CCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 77765 5667888888898899999999999999999 58888876 589999999998887
Q ss_pred CchhhhhcccCCcceeccCCCCC
Q 048205 637 IIPISLEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 637 ~~p~~l~~l~~L~~l~l~~N~l~ 659 (1027)
.-+..+.....+..+.+++|.+.
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTTS
T ss_pred cChHHccccccchheeecCCCcc
Confidence 66677776667777777777653
No 30
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-47 Score=458.60 Aligned_cols=466 Identities=19% Similarity=0.186 Sum_probs=264.2
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
++||+++|.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 45666666666 4555554 56666666666666555556666666666666666666555566666666666666666
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCc-cCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDG-KIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
+++ .++.. .+++|++|+|++|++++ ..|..|+++++|++|++++|.+++ ..|..+++|
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L-------------- 138 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHL-------------- 138 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTS--------------
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccc--------------
Confidence 665 23222 33444444444444443 234445555555555555554442 223333333
Q ss_pred ChhccCCCCCCeeecccccc--CCCCCccccCCC-CCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEE
Q 048205 188 PEELGNLAELEKLQLQNNFL--TGTIPPSIFNLS-SLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIY 264 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~ 264 (1027)
+|++|++++|.+ .+..|..+..+. +...+++++|.+.+ .++...+..++.|+.++
T Consensus 139 --------~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~--------------~~~~~~~~~l~~L~~L~ 196 (520)
T 2z7x_B 139 --------NISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFH--------------FILDVSVKTVANLELSN 196 (520)
T ss_dssp --------CEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCC--------------CCCCCCCTTCSEEEECC
T ss_pred --------eeeEEEeecccccccccccccccccccceEEEEeccCcchh--------------hhhhhhhhcccceeecc
Confidence 004444444444 334444443332 12233444444432 11222223333334444
Q ss_pred eccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCcccc---ccCCc
Q 048205 265 LSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIF---NVSTL 341 (1027)
Q Consensus 265 Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~---~l~~L 341 (1027)
+++|.-...+ ..+.+.+| .++.+++|+.|++++|.+.+..+..+. ..++|
T Consensus 197 l~~n~~~~~~--------------------------~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L 249 (520)
T 2z7x_B 197 IKCVLEDNKC--------------------------SYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTV 249 (520)
T ss_dssp EEECCSTTTT--------------------------HHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSC
T ss_pred cccccccccc--------------------------ceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcc
Confidence 4333300000 00222222 333444444444444443322111110 12345
Q ss_pred ceEEccCccccccCCCCcc----CCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCc---ccc
Q 048205 342 KFLYLGSNSFFGRLPSSAD----VRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNL---RNL 414 (1027)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L 414 (1027)
++|++++|++.+.+|...+ ..+++|+.+++++|.+ .+| +..+..+ .+|
T Consensus 250 ~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p-----------------------~~~~~~~~~~~~L 304 (520)
T 2z7x_B 250 WYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFP-----------------------QSYIYEIFSNMNI 304 (520)
T ss_dssp SEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSC-----------------------THHHHHHHHTCCC
T ss_pred cEEEeecccccCccccchhhcccccCceeEeccccccce--ecc-----------------------hhhhhcccccCce
Confidence 5555555555444444432 2344444444444444 222 1222222 334
Q ss_pred cEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceE
Q 048205 415 KWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAI 494 (1027)
Q Consensus 415 ~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L 494 (1027)
+.|++++|.++..+. ...+++|++|++++|++++ .+|..++.+++|++|
T Consensus 305 ~~L~l~~n~l~~~~~------~~~l~~L~~L~Ls~n~l~~-------------------------~~~~~~~~l~~L~~L 353 (520)
T 2z7x_B 305 KNFTVSGTRMVHMLC------PSKISPFLHLDFSNNLLTD-------------------------TVFENCGHLTELETL 353 (520)
T ss_dssp SEEEEESSCCCCCCC------CSSCCCCCEEECCSSCCCT-------------------------TTTTTCCCCSSCCEE
T ss_pred eEEEcCCCccccccc------hhhCCcccEEEeECCccCh-------------------------hhhhhhccCCCCCEE
Confidence 455555554443221 0234455555555555443 345566777888888
Q ss_pred EecCccccC--chhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccC
Q 048205 495 YLGVNKLNG--SILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGN 572 (1027)
Q Consensus 495 ~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 572 (1027)
++++|++++ .+|..++++++|++|+|++|++++.+|. ..+..+++|+.|++++|.+++.+|..+.
T Consensus 354 ~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~------------~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 354 ILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKK------------GDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp ECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGG------------CSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred EccCCccCccccchHHHhhCCCCCEEECCCCcCCccccc------------chhccCccCCEEECcCCCCCcchhhhhc-
Confidence 888888887 6678899999999999999998653332 1256678999999999999988888775
Q ss_pred cccccEEcccccccccccchhhccCccccEEEccCCccccCcccc-ccccccccccccccccccCCch
Q 048205 573 LKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDS-IGDMINLKSLNLSNNNLFGIIP 639 (1027)
Q Consensus 573 l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~L~~L~l~~N~l~~~~p 639 (1027)
++|+.||+++|+++ .+|..+..+++|++|+|++|+|+ .+|.. +..+++|++|+|++|++++..+
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 78999999999998 79999999999999999999999 68876 8999999999999999998766
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-48 Score=434.40 Aligned_cols=264 Identities=23% Similarity=0.373 Sum_probs=216.8
Q ss_pred cHHHHHHHhCCCCccceeeccccceEEEEEecC------CceEEEEEEecccc-hhHHHHHHHHHHHhhccC-CccceEE
Q 048205 741 TYLELFQATNGFSENNLIGRGGFGFVYKARIQD------GMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRH-RNIIKFI 812 (1027)
Q Consensus 741 ~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h-~niv~l~ 812 (1027)
...+++...++|++.+.||+|+||+||+|++.. ++.||||+++.... ...+.+.+|++++++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 334444556789999999999999999998652 36799999975433 345678999999999965 8999999
Q ss_pred eEEecC-CeeEEEEEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 048205 813 SSCSSD-DFKALVLEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 876 (1027)
Q Consensus 813 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 876 (1027)
++|.+. +..++|||||++|+|.++++... ..+++.++..++.|||+||+||| +++||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCcc
Confidence 999764 56899999999999999997532 34899999999999999999999 999999999
Q ss_pred CCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCC
Q 048205 877 KPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDES 955 (1027)
Q Consensus 877 kp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~ 955 (1027)
||+|||+++++.+||+|||+|+.+............+||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 99999999999999999999997765554445566789999999999999999999999999999999998 89999765
Q ss_pred cccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 956 FTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
..... +...+ ... .+...+..+++++.+++.+||+.||++|||++||+++|+
T Consensus 292 ~~~~~-~~~~i------------~~g------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 292 KIDEE-FCRRL------------KEG------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCSHH-HHHHH------------HHT------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHH-HHHHH------------HcC------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 32221 11111 111 111223457788999999999999999999999999875
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.3e-47 Score=464.47 Aligned_cols=548 Identities=22% Similarity=0.187 Sum_probs=340.0
Q ss_pred cCCccCcCCC---CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCcc
Q 048205 17 KIPSTLSNCK---RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSS 93 (1027)
Q Consensus 17 ~~~~~~~~~~---~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 93 (1027)
.+|.+...|. .-+..+.++.+++ .+|..+. +++++|||++|+|++..+.+|.++++|++|+|++|+|+++.|.+
T Consensus 19 ~~p~~~~~c~~~~~~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~ 95 (635)
T 4g8a_A 19 SIPESWEPCVEVVPNITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGA 95 (635)
T ss_dssp ------CCSEEEETTTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTT
T ss_pred CCCCCCCCccccCCCCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhH
Confidence 4555554442 2357788888898 7888775 68999999999999777888999999999999999999877888
Q ss_pred ccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccc-ccCccccCCCC
Q 048205 94 IFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSG-DIPKEIGNLTK 172 (1027)
Q Consensus 94 l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~ 172 (1027)
|.++++|++|+|++|+|+ .++...|.++++|++|+|++|+++++.+..|+++++|++|+|++|.+++ ..|..++.+++
T Consensus 96 f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 174 (635)
T 4g8a_A 96 YQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTN 174 (635)
T ss_dssp TTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTT
T ss_pred hcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchh
Confidence 999999999999999998 6778889999999999999999998888889999999999999999975 35788899999
Q ss_pred CcEEEccCccCCCCCChhccCCCCC----CeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhcccc
Q 048205 173 LKYLHLDQNRLQGEIPEELGNLAEL----EKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAE 248 (1027)
Q Consensus 173 L~~L~L~~N~l~~~~p~~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~ 248 (1027)
|++|+|++|++++..+..|..+.++ ..++++.|.++...+ .......++.+++++|..+. .
T Consensus 175 L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~-~~~~~~~~~~l~l~~n~~~~--------------~ 239 (635)
T 4g8a_A 175 LEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP-GAFKEIRLHKLTLRNNFDSL--------------N 239 (635)
T ss_dssp CCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECT-TTTTTCEEEEEEEESCCSSH--------------H
T ss_pred hhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCc-ccccchhhhhhhhhcccccc--------------c
Confidence 9999999999998888877766554 368889999985444 44455567888888887641 1
Q ss_pred CCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccc---cCCccccCcCcccceeccCc
Q 048205 249 LPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQC---VIPHEIDNLHNLEWMIFSFN 325 (1027)
Q Consensus 249 l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N 325 (1027)
+....+..++.++...+..+.......... .....+..+..+...++..+.... ..+..+..+.+++.+.+.+|
T Consensus 240 ~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~---~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 316 (635)
T 4g8a_A 240 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEK---FDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSV 316 (635)
T ss_dssp HHHHHHHTTTTCEEEEEEEECCTTSCCCSC---CCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESC
T ss_pred ccchhhcCCccccccccccccccccccccc---ccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccc
Confidence 223334455666666665444332111000 112233344445555444433321 12334555666667777776
Q ss_pred ccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccC--C
Q 048205 326 KLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSG--F 403 (1027)
Q Consensus 326 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~ 403 (1027)
.+..+.+ +....+|+.|++.+|.+.+ ++.. .+..|+.+++++|.+... .....+++|+.|++++|.+.. .
T Consensus 317 ~~~~~~~--~~~~~~L~~L~l~~~~~~~-~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~ 388 (635)
T 4g8a_A 317 TIERVKD--FSYNFGWQHLELVNCKFGQ-FPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGC 388 (635)
T ss_dssp EEEECGG--GGSCCCCSEEEEESCEESS-CCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEE
T ss_pred ccccccc--cccchhhhhhhcccccccC-cCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccc
Confidence 6665432 3445566677777666642 2222 345666666666665432 233456666666666666642 2
Q ss_pred CCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCc
Q 048205 404 IPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPK 483 (1027)
Q Consensus 404 ~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~ 483 (1027)
.+..+..+.+|++|+++.|.+...+... ..++.|+.++++.|...... .+.
T Consensus 389 ~~~~~~~~~~L~~L~~~~~~~~~~~~~~-----~~l~~L~~l~l~~~~~~~~~------------------------~~~ 439 (635)
T 4g8a_A 389 CSQSDFGTISLKYLDLSFNGVITMSSNF-----LGLEQLEHLDFQHSNLKQMS------------------------EFS 439 (635)
T ss_dssp CCHHHHSCSCCCEEECCSCSEEEECSCC-----TTCTTCCEEECTTSEEESTT------------------------SSC
T ss_pred cccchhhhhhhhhhhccccccccccccc-----cccccccchhhhhccccccc------------------------ccc
Confidence 3444555566666666666544333221 23344444444444332211 112
Q ss_pred ccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccc
Q 048205 484 EINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFT 563 (1027)
Q Consensus 484 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~ 563 (1027)
.+..+.+++.++++.|++.+..+..+..+++|++|+|++|++. .
T Consensus 440 ~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~------------------------------------~ 483 (635)
T 4g8a_A 440 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ------------------------------------E 483 (635)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG------------------------------------G
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhcccc------------------------------------c
Confidence 3344455555555555555555555555555555555555432 2
Q ss_pred cCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhh
Q 048205 564 GPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLE 643 (1027)
Q Consensus 564 ~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 643 (1027)
+.+|..++.+++|+.|||++|++++.+|..|+++++|++|+|++|+|++..|..|+.+++|+.|||++|+|++.+|..+.
T Consensus 484 ~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 563 (635)
T 4g8a_A 484 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 563 (635)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTT
T ss_pred ccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHH
Confidence 23444455555555555555555555555555555555555555555544444555555555555555555555555555
Q ss_pred cc-cCCcceeccCCCCC
Q 048205 644 KL-LDLKDINVSFNKLE 659 (1027)
Q Consensus 644 ~l-~~L~~l~l~~N~l~ 659 (1027)
.+ ++|+.|++++|++.
T Consensus 564 ~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 564 HFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CCCTTCCEEECTTCCBC
T ss_pred hhhCcCCEEEeeCCCCc
Confidence 55 34555555555554
No 33
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.8e-48 Score=426.01 Aligned_cols=272 Identities=24% Similarity=0.300 Sum_probs=199.6
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC----eeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD----FKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV~ 825 (1027)
++|...+.||+|+||+||+|++ +|+.||||+++..... ...++.|+..+.+++|||||+++++|.+++ ..++||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999998 5899999999754322 223445677778899999999999997654 579999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
|||++|+|.++++... ++|..+.+++.|+++||+|||.. +..+||||||||+|||++.++.+||+|||+|+..
T Consensus 81 Ey~~~gsL~~~l~~~~--l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYT--VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp ECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred cCCCCCcHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 9999999999998654 89999999999999999999932 1239999999999999999999999999999876
Q ss_pred ccCCCc--ceecccccCccccCcccccCC------CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh-
Q 048205 901 LKEDQS--LTQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL- 971 (1027)
Q Consensus 901 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~- 971 (1027)
...... ......+||+.|||||++.+. .++.++|||||||++|||+||++||.........+..+......
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 443322 122345799999999998754 46789999999999999999988875432222111111000000
Q ss_pred hhHH-HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 972 ISIM-EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 972 ~~~~-~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... .+.+........ .......++..+.+|+.+||+.||++||||+||++.|+
T Consensus 239 ~~~~~~~~~~~~rp~~p-~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 239 EEMRKVVCEQKLRPNIP-NRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp HHHHHHHTTSCCCCCCC-GGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCCC-ccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 0001 111121111111 11122346678999999999999999999999999886
No 34
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1e-48 Score=424.50 Aligned_cols=247 Identities=24% Similarity=0.324 Sum_probs=198.7
Q ss_pred CCCCccceeeccccceEEEEEec----CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|++.+.||+|+||+||+|+.. +++.||||++++.. ......+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56999999999999999999853 47889999997542 2233467889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||++||+|.+++.+.. .+++.++..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 4899999999999999999999 999999999999999999999999999999865332
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
. ......+||+.|||||++.+..|+.++||||+||++|||+||++||.+.... +... .+....
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-----~~~~--------~i~~~~-- 242 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-----ETMT--------MILKAK-- 242 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCC--
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-----HHHH--------HHHcCC--
Confidence 2 2334568999999999999999999999999999999999999999764221 1111 111111
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA-----KEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~-----~evl~ 1023 (1027)
...+..+++++.+|+.+||++||++|||+ +|+++
T Consensus 243 ------~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 ------LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ------CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ------CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11123467789999999999999999984 67764
No 35
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1e-46 Score=465.42 Aligned_cols=489 Identities=19% Similarity=0.204 Sum_probs=273.9
Q ss_pred CCCcEEEccCCcccccCCccccccCCCcEEEc-cccccceeCcccccCC-CCCCEE-----E----------ccCcccCC
Q 048205 26 KRLRNISLSLNDFSGTIPKEIGNVTTLIGLHL-RGNKLQGEIPEELGNL-AELEEL-----W----------LQNNFLTG 88 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L-~~n~i~~~~p~~l~~l-~~L~~L-----~----------L~~N~l~~ 88 (1027)
.+++.|+|++|.+.|.+|..+++++.|++|+| ++|.+++..|-..... ..+... . .....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57999999999999999999999999999999 9999886644321111 000000 0 00000110
Q ss_pred ccCc-----------cccCCCCCCeEeCCc--ccccccchhhhhcCCCCCcEEEccCCcCCcc-CcccccCCCCCcEEEc
Q 048205 89 TIPS-----------SIFNLSSLSNLDLSV--NNLTGELLANICSNLPLLQTLFLDENNFDGK-IPSTLLRCKHLQTLSL 154 (1027)
Q Consensus 89 ~~p~-----------~l~~l~~L~~L~Ls~--N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L 154 (1027)
..+. .......++.+.++. |++++ +|. .+..+++|++|+|++|++++. ++..+. ..
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~-~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~--------~~ 472 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISK-AIQRLTKLQIIYFANSPFTYDNIAVDWE--------DA 472 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECG-GGGGCTTCCEEEEESCCCCGGGBSSSCS--------CT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhH-HHhcCCCCCEEECcCCcCCCCccccccc--------cc
Confidence 1101 111122223333322 44443 222 233444444444444444431 000000 00
Q ss_pred cCCccccccCcccc--CCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccc-cCC-CCCccccCCC-------CCCE
Q 048205 155 SINDFSGDIPKEIG--NLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNF-LTG-TIPPSIFNLS-------SLSD 223 (1027)
Q Consensus 155 s~N~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~ 223 (1027)
+.|.+++.+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.++ +|+.
T Consensus 473 s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 473 NSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred ccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 00001112444444 55555555555555555555555555555555555554 444 3444333332 5555
Q ss_pred EEccCccCCCCCCcchhhhhhccccCCc-cccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCcc
Q 048205 224 LELSFNSLTGNFPKDMHIVNRLSAELPA-KFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNR 302 (1027)
Q Consensus 224 L~Ls~N~l~~~~p~~~~~~~~~~~~l~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~ 302 (1027)
|+|++|+++ .+|. ..+..+++|+.|+|++|+++ .+| .++.+++|+.|+|++|+
T Consensus 553 L~Ls~N~L~---------------~ip~~~~l~~L~~L~~L~Ls~N~l~----------~lp-~~~~L~~L~~L~Ls~N~ 606 (876)
T 4ecn_A 553 FYMGYNNLE---------------EFPASASLQKMVKLGLLDCVHNKVR----------HLE-AFGTNVKLTDLKLDYNQ 606 (876)
T ss_dssp EECCSSCCC---------------BCCCHHHHTTCTTCCEEECTTSCCC----------BCC-CCCTTSEESEEECCSSC
T ss_pred EEeeCCcCC---------------ccCChhhhhcCCCCCEEECCCCCcc----------cch-hhcCCCcceEEECcCCc
Confidence 555555554 2222 12334555555555555554 233 45556666666666666
Q ss_pred ccccCCccccCcCc-ccceeccCcccccccCccccccCC--cceEEccCccccccCCCCc----cCCCCCccEEEccccc
Q 048205 303 LQCVIPHEIDNLHN-LEWMIFSFNKLVGVVPTTIFNVST--LKFLYLGSNSFFGRLPSSA----DVRLPNLEELSLSGNN 375 (1027)
Q Consensus 303 l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~~~~~~~l~~--L~~L~L~~N~l~~~~~~~~----~~~l~~L~~L~Ls~N~ 375 (1027)
++ .+|..+..+++ |+.|+|++|+++ .+|..+..+.. |+.|+|++|++.+.+|... ...+++|++|+|++|+
T Consensus 607 l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~ 684 (876)
T 4ecn_A 607 IE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNE 684 (876)
T ss_dssp CS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSC
T ss_pred cc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCc
Confidence 66 55566666666 777777777766 44555655543 7777777777766554321 1134577888888888
Q ss_pred cCCcCcccc-cCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCC
Q 048205 376 FSGTIPSFI-FNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGG 454 (1027)
Q Consensus 376 l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 454 (1027)
++ .+|..+ ..+++|+.|+|++|+|+.+.+..+..... ...+|++|++|+|++|+|+
T Consensus 685 L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~---------------------~l~nl~~L~~L~Ls~N~L~- 741 (876)
T 4ecn_A 685 IQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDG---------------------NYKNTYLLTTIDLRFNKLT- 741 (876)
T ss_dssp CC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTS---------------------CCTTGGGCCEEECCSSCCC-
T ss_pred CC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccc---------------------cccccCCccEEECCCCCCc-
Confidence 87 445444 36777777777777777433333322210 0012334444444444443
Q ss_pred CCCccccCcccccceeecCCCccccccCcccc--cccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCC
Q 048205 455 ILPRVIGNLSQSMEDFHMPNSNISGSIPKEIN--NLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDN 532 (1027)
Q Consensus 455 ~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~ 532 (1027)
.+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++|+
T Consensus 742 -------------------------~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~-------- 787 (876)
T 4ecn_A 742 -------------------------SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR-------- 787 (876)
T ss_dssp -------------------------CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB--------
T ss_pred -------------------------cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC--------
Confidence 2333343 56667777777777776 56677777788888887765
Q ss_pred CCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCcccc
Q 048205 533 LSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQG 612 (1027)
Q Consensus 533 ~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g 612 (1027)
++++|.+.+.+|..++.+++|+.|+|++|++ +.+|..+. ++|+.|+|++|++..
T Consensus 788 -----------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 788 -----------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp -----------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred -----------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 3456777777788888888888888888888 57887765 588888888888875
Q ss_pred Ccccccccccccccccccccccc
Q 048205 613 SIPDSIGDMINLKSLNLSNNNLF 635 (1027)
Q Consensus 613 ~ip~~~~~l~~L~~L~l~~N~l~ 635 (1027)
.-+..+.....+..+.|++|++.
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~~ 864 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKTQ 864 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTTS
T ss_pred cChHHccccccchheeecCCCcc
Confidence 45566666667777778777765
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.4e-47 Score=411.47 Aligned_cols=249 Identities=23% Similarity=0.380 Sum_probs=189.5
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecCC--------
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSDD-------- 819 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 819 (1027)
++|++.+.||+|+||+||+|+++ +|+.||||+++.... ...+.+.+|++++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 35889999999999999999976 799999999975443 34567889999999999999999999986544
Q ss_pred ----eeEEEEEecCCCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEee
Q 048205 820 ----FKALVLEYMPYGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSD 893 (1027)
Q Consensus 820 ----~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~D 893 (1027)
..|+||||+++|+|.+++.... ...++..+..++.||++||+||| +++|+||||||+|||++.+|.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3689999999999999998654 23566778899999999999999 99999999999999999999999999
Q ss_pred ecCCcccccCCCc----------ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHH
Q 048205 894 FGMAKPFLKEDQS----------LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLK 963 (1027)
Q Consensus 894 fgla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 963 (1027)
||+|+.+...... ...+..+||+.|||||++.+..|+.++||||+||++|||++ ||....+ ...
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---~~~ 235 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---RVR 235 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH---HHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH---HHH
Confidence 9999876533211 12234579999999999999999999999999999999996 7653211 000
Q ss_pred HHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 964 RWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 964 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.+ ..+.+. ... +.....++...+++.+||++||++|||+.|+++
T Consensus 236 ~~---------~~~~~~----~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 236 TL---------TDVRNL----KFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HH---------HHHHTT----CCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HH---------HHHhcC----CCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 011000 001 122234455778999999999999999999986
No 37
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.1e-45 Score=449.42 Aligned_cols=537 Identities=22% Similarity=0.194 Sum_probs=407.0
Q ss_pred EEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcc
Q 048205 6 YLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNF 85 (1027)
Q Consensus 6 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~ 85 (1027)
..+=++.+++ .+|..+. +++++|||++|+|++..|..|..+++|++|+|++|+|++..|++|.++++|++|+|++|+
T Consensus 35 ~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~ 111 (635)
T 4g8a_A 35 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 111 (635)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred EEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCc
Confidence 3455556777 6776664 579999999999997777889999999999999999998888899999999999999999
Q ss_pred cCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCcc-CcccccCCCCCcEEEccCCccccccC
Q 048205 86 LTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGK-IPSTLLRCKHLQTLSLSINDFSGDIP 164 (1027)
Q Consensus 86 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p 164 (1027)
|++..+..|.++++|++|+|++|+++ .++...|.++++|++|+|++|++++. .|..+..+++|++|+|++|.+++..+
T Consensus 112 l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 112 IQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp CCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred CCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccc
Confidence 99777788999999999999999998 57777789999999999999999864 57888999999999999999998888
Q ss_pred ccccCCCCCc----EEEccCccCCCCCChhccCCCCCCeeeccccccCCC-CCccccCCCCCCEEEccCccCCCCCCcch
Q 048205 165 KEIGNLTKLK----YLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGT-IPPSIFNLSSLSDLELSFNSLTGNFPKDM 239 (1027)
Q Consensus 165 ~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 239 (1027)
..|..+.+++ .++++.|.++.+.+..+ ....++.+++++|..... .+..+.++..++...+..+...+...
T Consensus 191 ~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~--- 266 (635)
T 4g8a_A 191 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGN--- 266 (635)
T ss_dssp GGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCC---
T ss_pred ccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccc---
Confidence 8887766544 78999999996555444 445678899999876532 34567788888888876665432111
Q ss_pred hhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccc
Q 048205 240 HIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEW 319 (1027)
Q Consensus 240 ~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 319 (1027)
........+..+..+...++..+....... .++..+..+.+++.+++.+|.+..+ ..+.....|+.
T Consensus 267 ------l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~------~~~~~~~~~~~l~~l~~~~~~~~~~--~~~~~~~~L~~ 332 (635)
T 4g8a_A 267 ------LEKFDKSALEGLCNLTIEEFRLAYLDYYLD------GIIDLFNCLTNVSSFSLVSVTIERV--KDFSYNFGWQH 332 (635)
T ss_dssp ------CSCCCTTTTGGGGGSEEEEEEEECCCSCEE------ECTTTTGGGTTCSEEEEESCEEEEC--GGGGSCCCCSE
T ss_pred ------cccccccccccccchhhhhhhhhhhccccc------chhhhhhhhcccccccccccccccc--cccccchhhhh
Confidence 012223334455566666666555432111 2334566678899999999988765 34667789999
Q ss_pred eeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCC--cCcccccCCCCCCeeecCC
Q 048205 320 MIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSG--TIPSFIFNTSKLSTLELQR 397 (1027)
Q Consensus 320 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~ 397 (1027)
|++++|.+.+..+. .+..|+.+++.+|.+... +.. ..+++|+.|++++|.+.. ..+..+..+.+|+.|+++.
T Consensus 333 L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~-~~~--~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~ 406 (635)
T 4g8a_A 333 LELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA-FSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSF 406 (635)
T ss_dssp EEEESCEESSCCCC---BCTTCCEEEEESCCSCCB-CCC--CBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCS
T ss_pred hhcccccccCcCcc---cchhhhhcccccccCCCC-ccc--ccccccccchhhccccccccccccchhhhhhhhhhhccc
Confidence 99999999876554 467889999999987533 222 358999999999999853 4566778899999999999
Q ss_pred CcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCcc
Q 048205 398 NSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNI 477 (1027)
Q Consensus 398 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~ 477 (1027)
|.+.. .+..|..+++|+.+++++|++....... .+..++.++.++++.|.+...
T Consensus 407 ~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~---~~~~l~~l~~l~ls~n~l~~~---------------------- 460 (635)
T 4g8a_A 407 NGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS---VFLSLRNLIYLDISHTHTRVA---------------------- 460 (635)
T ss_dssp CSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSC---TTTTCTTCCEEECTTSCCEEC----------------------
T ss_pred ccccc-ccccccccccccchhhhhcccccccccc---ccccccccccccccccccccc----------------------
Confidence 99985 5677899999999999999876554432 235677788888887776644
Q ss_pred ccccCcccccccccceEEecCcccc-CchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEe
Q 048205 478 SGSIPKEINNLTNLIAIYLGVNKLN-GSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLN 556 (1027)
Q Consensus 478 ~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~ 556 (1027)
.|..+..+++|+.|++++|++. +..|..|..+++|++|+|++|+|++
T Consensus 461 ---~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~----------------------------- 508 (635)
T 4g8a_A 461 ---FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ----------------------------- 508 (635)
T ss_dssp ---CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE-----------------------------
T ss_pred ---cccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCC-----------------------------
Confidence 4455666778888999988754 4566677777777777777777643
Q ss_pred cCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccc-cccccccccccccc
Q 048205 557 LSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDM-INLKSLNLSNNNLF 635 (1027)
Q Consensus 557 Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l-~~L~~L~l~~N~l~ 635 (1027)
..|..|+++++|++|+|++|+|++..|..|+++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|+++
T Consensus 509 --------l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 509 --------LSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp --------ECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred --------cChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 345556666677777777777776666667777777777777777777667777666 56777777777776
Q ss_pred C
Q 048205 636 G 636 (1027)
Q Consensus 636 ~ 636 (1027)
-
T Consensus 581 C 581 (635)
T 4g8a_A 581 C 581 (635)
T ss_dssp C
T ss_pred c
Confidence 4
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=7.4e-45 Score=438.07 Aligned_cols=467 Identities=22% Similarity=0.235 Sum_probs=229.4
Q ss_pred CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCC
Q 048205 27 RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 106 (1027)
..+++++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 32 ~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 32 LESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp -CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred CCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 3456666666666 3555443 566666666666665555556666666666666666665555556666666666666
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc-cCccccCCCCCcEEEccCccCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD-IPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
+|+++ .++.. .+++|++|+|++|.+++. .|..|+++++|++|+|++|++++
T Consensus 109 ~N~l~-~lp~~---------------------------~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 109 HNRLQ-NISCC---------------------------PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp TSCCC-EECSC---------------------------CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCcCC-ccCcc---------------------------ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc
Confidence 66555 23222 344455555555554431 23445555555555555555543
Q ss_pred CCChhccCCCCC--Ceeecccccc--CCCCCccccCCC--CCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCcc
Q 048205 186 EIPEELGNLAEL--EKLQLQNNFL--TGTIPPSIFNLS--SLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPF 259 (1027)
Q Consensus 186 ~~p~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~ 259 (1027)
. .+..+++| ++|++++|.+ ++..|..+..+. .+ .++++.|.+.+ .++...+..++.
T Consensus 161 ~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~--------------~~~~~~~~~l~~ 222 (562)
T 3a79_B 161 L---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFS--------------VQVNMSVNALGH 222 (562)
T ss_dssp T---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCC--------------CCCEEEESSEEE
T ss_pred C---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchh--------------hhhhhcccccce
Confidence 2 22333333 5555555555 445555554433 22 34555555542 122233334445
Q ss_pred ccEEEecccccccc-CCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCcccccc
Q 048205 260 LEEIYLSKNMFYGE-IPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNV 338 (1027)
Q Consensus 260 L~~L~Ls~N~l~~~-~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 338 (1027)
|+.+++++|..... ++ ..+..+..+++|+.|+++++.+.+ |.+.+..+. ...
T Consensus 223 L~~L~l~~n~~~~~~l~------~~~~~l~~l~~L~~L~L~~~~l~~-------------------~~~~~~~~~--~~~ 275 (562)
T 3a79_B 223 LQLSNIKLNDENCQRLM------TFLSELTRGPTLLNVTLQHIETTW-------------------KCSVKLFQF--FWP 275 (562)
T ss_dssp EEEEEEECCSTTHHHHH------HHHHHHHSCSSCEEEEEEEEEECH-------------------HHHHHHHHH--HTT
T ss_pred EEEecccccccccchHH------HHHHHHhccCcceEEEecCCcCcH-------------------HHHHHHHHh--hhc
Confidence 55555555431000 00 001122233333333333332221 111111111 112
Q ss_pred CCcceEEccCccccccCCCCcc----CCCCCccEEEccccccCCcCc-ccccCCCCCCeeecCCCcccCCCCcccCCccc
Q 048205 339 STLKFLYLGSNSFFGRLPSSAD----VRLPNLEELSLSGNNFSGTIP-SFIFNTSKLSTLELQRNSFSGFIPNTFGNLRN 413 (1027)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~----~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 413 (1027)
.+|++|++++|.+.+.+|...+ ..++.|+.++++.|.+ .+| ..+..+ ..-.+
T Consensus 276 ~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~---------------------~~~~~ 332 (562)
T 3a79_B 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSV---------------------FAEMN 332 (562)
T ss_dssp SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHH---------------------HHTCC
T ss_pred ccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhh---------------------hccCc
Confidence 2445555555555444444332 2233333333333333 122 111111 00123
Q ss_pred ccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccce
Q 048205 414 LKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIA 493 (1027)
Q Consensus 414 L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~ 493 (1027)
|++|++++|.+...+. ...+++|++|++++|+++ +.+|..++++++|++
T Consensus 333 L~~L~l~~n~~~~~~~------~~~l~~L~~L~l~~n~l~-------------------------~~~~~~~~~l~~L~~ 381 (562)
T 3a79_B 333 IKMLSISDTPFIHMVC------PPSPSSFTFLNFTQNVFT-------------------------DSVFQGCSTLKRLQT 381 (562)
T ss_dssp CSEEEEESSCCCCCCC------CSSCCCCCEEECCSSCCC-------------------------TTTTTTCCSCSSCCE
T ss_pred ceEEEccCCCcccccC------ccCCCCceEEECCCCccc-------------------------cchhhhhcccCCCCE
Confidence 4445555544432211 012334444444444433 234455566667777
Q ss_pred EEecCccccC--chhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCcccccc
Q 048205 494 IYLGVNKLNG--SILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIG 571 (1027)
Q Consensus 494 L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 571 (1027)
|++++|++++ .+|..|+++++|++|+|++|++++.+|. ..+..+++|++|++++|.+++.+|..+.
T Consensus 382 L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~------------~~~~~l~~L~~L~l~~n~l~~~~~~~l~ 449 (562)
T 3a79_B 382 LILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD------------RTCAWAESILVLNLSSNMLTGSVFRCLP 449 (562)
T ss_dssp EECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS------------CCCCCCTTCCEEECCSSCCCGGGGSSCC
T ss_pred EECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh------------hhhcCcccCCEEECCCCCCCcchhhhhc
Confidence 7777777775 4456677777777777777777543332 1244556666666666666665555443
Q ss_pred CcccccEEcccccccccccchhhccCccccEEEccCCccccCcccc-ccccccccccccccccccCCch
Q 048205 572 NLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDS-IGDMINLKSLNLSNNNLFGIIP 639 (1027)
Q Consensus 572 ~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~-~~~l~~L~~L~l~~N~l~~~~p 639 (1027)
++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|.. ++.+++|+.|+|++|++++..|
T Consensus 450 --~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 450 --PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp --TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred --CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 46666666666665 46666666666666666666666 45554 6666666666666666665544
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.7e-45 Score=443.68 Aligned_cols=462 Identities=22% Similarity=0.238 Sum_probs=333.4
Q ss_pred CCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeee
Q 048205 122 LPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQ 201 (1027)
Q Consensus 122 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 201 (1027)
....+++++++|++++ +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 106 (562)
T 3a79_B 30 NELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLD 106 (562)
T ss_dssp ---CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred cCCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEE
Confidence 3345788888888885 554443 7888888888888877777888888888888888888877788888888888888
Q ss_pred ccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCc-cccCCCccccEEEeccccccccCCCCCCC
Q 048205 202 LQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPA-KFCNNIPFLEEIYLSKNMFYGEIPSDLGN 280 (1027)
Q Consensus 202 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 280 (1027)
|++|+|+ .+|.. .+++|++|+|++|++++ ++. ..+..+++|++|++++|++++
T Consensus 107 Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~---------------l~~p~~~~~l~~L~~L~L~~n~l~~-------- 160 (562)
T 3a79_B 107 VSHNRLQ-NISCC--PMASLRHLDLSFNDFDV---------------LPVCKEFGNLTKLTFLGLSAAKFRQ-------- 160 (562)
T ss_dssp CTTSCCC-EECSC--CCTTCSEEECCSSCCSB---------------CCCCGGGGGCTTCCEEEEECSBCCT--------
T ss_pred CCCCcCC-ccCcc--ccccCCEEECCCCCccc---------------cCchHhhcccCcccEEecCCCcccc--------
Confidence 8888888 45555 78888888888888862 221 345567777777777777763
Q ss_pred CCCCccccCcCCc--cceeccCccc--cccCCccccCcC--cccceeccCcccccccCc-cccccCCcceEEccCcc---
Q 048205 281 CTIPKEIGNLAKL--EKLDLQFNRL--QCVIPHEIDNLH--NLEWMIFSFNKLVGVVPT-TIFNVSTLKFLYLGSNS--- 350 (1027)
Q Consensus 281 ~~~p~~l~~l~~L--~~L~L~~N~l--~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~--- 350 (1027)
..+..+++| +.|++++|++ ++..|..|..+. .+ .+++++|.+.+..+. .+.++++|+.|++++|+
T Consensus 161 ----~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 235 (562)
T 3a79_B 161 ----LDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENC 235 (562)
T ss_dssp ----TTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTH
T ss_pred ----CchhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEeccccccccc
Confidence 123344444 7777777777 666676666654 23 456677776654433 34556677777777764
Q ss_pred --ccccCCCCccCCCCCccEEEccccccCCc----CcccccCCCCCCeeecCCCcccCCCCccc-----CCcccccEEec
Q 048205 351 --FFGRLPSSADVRLPNLEELSLSGNNFSGT----IPSFIFNTSKLSTLELQRNSFSGFIPNTF-----GNLRNLKWLDL 419 (1027)
Q Consensus 351 --l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~L 419 (1027)
+.+.++ .+..+++|+.|+|+++.+++. ++..+ ..++|++|++++|.+++.+|..+ ..++.|+.+++
T Consensus 236 ~~l~~~~~--~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~ 312 (562)
T 3a79_B 236 QRLMTFLS--ELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHV 312 (562)
T ss_dssp HHHHHHHH--HHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEE
T ss_pred chHHHHHH--HHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhc
Confidence 111111 123456666666666655432 11111 23467777777777776666665 56666666666
Q ss_pred CCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCc
Q 048205 420 GDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVN 499 (1027)
Q Consensus 420 ~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N 499 (1027)
+.|.+ .+|.+..+ ......+|++|++++|++.. .. ..+.+++|++|++++|
T Consensus 313 ~~~~~-~~p~~~~~-~~~~~~~L~~L~l~~n~~~~-------------------------~~--~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 313 KNQVF-LFSKEALY-SVFAEMNIKMLSISDTPFIH-------------------------MV--CPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EECCC-SSCHHHHH-HHHHTCCCSEEEEESSCCCC-------------------------CC--CCSSCCCCCEEECCSS
T ss_pred cccee-ecChhhhh-hhhccCcceEEEccCCCccc-------------------------cc--CccCCCCceEEECCCC
Confidence 66665 33322110 00011346666666665532 11 1257889999999999
Q ss_pred cccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccc-cccCcccccE
Q 048205 500 KLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPL-EIGNLKVLVQ 578 (1027)
Q Consensus 500 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~ 578 (1027)
++++.+|..++++++|++|+|++|++++ +..+|..+.++++|++|++++|.+++.+|. .+..+++|+.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----------~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~ 432 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKN-----------FFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILV 432 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCB-----------TTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCE
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCC-----------cccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCE
Confidence 9999999999999999999999999963 124556788999999999999999986776 4888999999
Q ss_pred EcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhh-hhcccCCcceeccCCC
Q 048205 579 IDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPIS-LEKLLDLKDINVSFNK 657 (1027)
Q Consensus 579 L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~-l~~l~~L~~l~l~~N~ 657 (1027)
|++++|++++.+|..+. ++|++|+|++|+++ .||..++.+++|+.|+|++|+++ .+|.. +..+++|+.|++++|+
T Consensus 433 L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~ 508 (562)
T 3a79_B 433 LNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNP 508 (562)
T ss_dssp EECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCC
T ss_pred EECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCC
Confidence 99999999988888765 78999999999999 79999999999999999999999 56666 9999999999999999
Q ss_pred CCCCCCC
Q 048205 658 LEGEIPR 664 (1027)
Q Consensus 658 l~g~~p~ 664 (1027)
+.+..|.
T Consensus 509 ~~c~c~~ 515 (562)
T 3a79_B 509 WDCTCPG 515 (562)
T ss_dssp BCCCHHH
T ss_pred cCCCcch
Confidence 9987764
No 40
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5.8e-45 Score=408.48 Aligned_cols=268 Identities=21% Similarity=0.250 Sum_probs=204.9
Q ss_pred HHhCCCCccceeeccccceEEEEEec----CCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCee
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 821 (1027)
...++|++.+.||+|+||+||+|+.+ +++.||||++.... ....+.+|+++++.+ +|||||++++++.+.+..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 45678999999999999999999854 46789999986543 235678899999998 699999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeecCCccc
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN-MVAHLSDFGMAKPF 900 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfgla~~~ 900 (1027)
|+||||++||+|.+++.. +++.++..++.|++.||+||| ++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus 96 ~lvmE~~~g~~L~~~~~~----l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~ 168 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS----LSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT 168 (361)
T ss_dssp EEEEECCCCCCHHHHHTT----CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEEeCCCcccHHHHHcC----CCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence 999999999999999853 899999999999999999999 9999999999999999876 89999999999855
Q ss_pred ccCCC--------------------------cceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCC
Q 048205 901 LKEDQ--------------------------SLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTD 953 (1027)
Q Consensus 901 ~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~ 953 (1027)
..... .......+||++|+|||++.+. .++.++||||+||++|||++|+.||.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~ 248 (361)
T 4f9c_A 169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248 (361)
T ss_dssp TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCC
Confidence 32211 1122345799999999998875 58999999999999999999999997
Q ss_pred CCcccchhHHHHHHHHHhhh---HHHhhhccccC-------------------------------ccchhhhHHhhhHHH
Q 048205 954 ESFTGEMTLKRWVNDLLLIS---IMEVVDANLLS-------------------------------HEDKHFVAKEQCMSF 999 (1027)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~-------------------------------~~~~~~~~~~~~~~~ 999 (1027)
...+....+........... ........... ........+...+++
T Consensus 249 ~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~ 328 (361)
T 4f9c_A 249 KASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDE 328 (361)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHH
T ss_pred CCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHH
Confidence 65444333333332221111 11110000000 000011122345677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 048205 1000 VFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 1000 l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+.+|+.+||..||++|||++|+++
T Consensus 329 a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 329 AYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHCcCChhHCcCHHHHhc
Confidence 899999999999999999999986
No 41
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-45 Score=410.77 Aligned_cols=269 Identities=23% Similarity=0.257 Sum_probs=205.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEec------CC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSS------DD 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 819 (1027)
.++|++.+.||+|+||+||+|++. +|+.||||+++... ....+.+.+|++++++++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 467999999999999999999975 79999999997543 2345678899999999999999999998754 36
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..|+|||||+ |+|.+++...+ .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 7899999996 58999987654 5899999999999999999999 99999999999999999999999999999987
Q ss_pred cccCC--CcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhH--
Q 048205 900 FLKED--QSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISI-- 974 (1027)
Q Consensus 900 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-- 974 (1027)
+.... ........+||+.|||||++.+. .++.++||||+||++|||++|++||.+.... ..+............
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~ 286 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAV 286 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHH
Confidence 64322 12234557899999999998775 5699999999999999999999999864321 112221111110000
Q ss_pred ---------HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 975 ---------MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 975 ---------~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..................+.++.+|+.+||.+||++|||++|+++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 287 IQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp TC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000000000011112345677899999999999999999999986
No 42
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.2e-44 Score=423.66 Aligned_cols=252 Identities=19% Similarity=0.262 Sum_probs=213.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|++.+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++++.++|||||+++++|.+.+..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 367999999999999999999976 7999999999876666667888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC--CcEEEeeecCCcccccCCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN--MVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~--~~~kl~Dfgla~~~~~~~~ 905 (1027)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999999999876667999999999999999999999 9999999999999999854 89999999999976432
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
......+||+.|||||++.+..|+.++||||+||++|||++|++||.+....+. +.. +....
T Consensus 311 -~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~------------i~~~~---- 372 (573)
T 3uto_A 311 -QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRN------------VKSCD---- 372 (573)
T ss_dssp -SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH------------HHTTC----
T ss_pred -CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHH------------HHhCC----
Confidence 233456899999999999999999999999999999999999999976432111 111 11000
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.......+..++.++.+|+.+||+.||++||++.|+++
T Consensus 373 ~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 373 WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00111223456778899999999999999999999987
No 43
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=7e-44 Score=418.90 Aligned_cols=249 Identities=24% Similarity=0.313 Sum_probs=202.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHH---HHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKS---FDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~---~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
.++|++.+.||+|+||+||+|+.+ +|+.||||++++.. ...... ...++++++.++|||||+++++|.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999976 69999999997542 111222 23446677888999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
|+||||++||+|.+++.... .+++..+..++.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999997654 4899999999999999999999 9999999999999999999999999999998664
Q ss_pred cCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.. .....+||+.|||||++.. ..|+.++||||+||++|||++|++||........ ...... +...
T Consensus 344 ~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~--~~i~~~--------i~~~ 409 (689)
T 3v5w_A 344 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM--------TLTM 409 (689)
T ss_dssp SC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH--HHHHHH--------HHHC
T ss_pred CC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHHh--------hcCC
Confidence 32 2345689999999999975 5799999999999999999999999976432221 111110 0111
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN-----AKEIVT 1023 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps-----~~evl~ 1023 (1027)
. ...+..++.++.+|+.+||.+||++|++ ++||++
T Consensus 410 ~--------~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 410 A--------VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp C--------CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred C--------CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 1 1112346677899999999999999998 677764
No 44
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-42 Score=404.79 Aligned_cols=398 Identities=23% Similarity=0.288 Sum_probs=190.2
Q ss_pred CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeec
Q 048205 123 PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQL 202 (1027)
Q Consensus 123 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 202 (1027)
+.|++|++++|.+ +.+|.+++++++|++|++++|.+.+.+|..++++.+|+.+++++|.. .++++|++
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~l 78 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELEL 78 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEEC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEEe
Confidence 3455555555555 34455555555555555555555555555555555444444433321 23466666
Q ss_pred cccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCC
Q 048205 203 QNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCT 282 (1027)
Q Consensus 203 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 282 (1027)
++|.+++ +|.. .++|++|++++|.+++ +| . .+++|++|++++|++++
T Consensus 79 ~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp--------------~----~~~~L~~L~l~~n~l~~---------- 125 (454)
T 1jl5_A 79 NNLGLSS-LPEL---PPHLESLVASCNSLTE-LP--------------E----LPQSLKSLLVDNNNLKA---------- 125 (454)
T ss_dssp TTSCCSC-CCSC---CTTCSEEECCSSCCSS-CC--------------C----CCTTCCEEECCSSCCSC----------
T ss_pred cCCcccc-CCCC---cCCCCEEEccCCcCCc-cc--------------c----ccCCCcEEECCCCccCc----------
Confidence 6666663 3331 2566666666666653 22 1 12456666666666652
Q ss_pred CCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCC
Q 048205 283 IPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVR 362 (1027)
Q Consensus 283 ~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~ 362 (1027)
+|.. .++|++|++++|++++ +| .|+++++|++|++++|+++++ |.. ..+|++|++++|++.+ +|. +..
T Consensus 126 l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~-l~~--~~~ 193 (454)
T 1jl5_A 126 LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEE-LPE--LQN 193 (454)
T ss_dssp CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSS-CCC--CTT
T ss_pred ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCc-Ccc--ccC
Confidence 1111 1466677777777665 34 466666666666666666652 322 2366666666666653 442 345
Q ss_pred CCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccc
Q 048205 363 LPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYL 442 (1027)
Q Consensus 363 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L 442 (1027)
+++|++|++++|++++ +|... ++|++|++++|+++ .+| .|+.+++|++|++++|+++++|.. .+.|
T Consensus 194 l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~--------~~~L 259 (454)
T 1jl5_A 194 LPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL--------PPSL 259 (454)
T ss_dssp CTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC--------CTTC
T ss_pred CCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCccccc--------cccc
Confidence 6666666666666653 33322 45666666666666 344 366666666666666666655431 2456
Q ss_pred cEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccC
Q 048205 443 EYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKD 522 (1027)
Q Consensus 443 ~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 522 (1027)
++|++++|+++++ |.. +++|++|++++|++++. |. -.++|+.|++++
T Consensus 260 ~~L~l~~N~l~~l--------------------------~~~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~ 306 (454)
T 1jl5_A 260 EALNVRDNYLTDL--------------------------PEL---PQSLTFLDVSENIFSGL-SE---LPPNLYYLNASS 306 (454)
T ss_dssp CEEECCSSCCSCC--------------------------CCC---CTTCCEEECCSSCCSEE-SC---CCTTCCEEECCS
T ss_pred CEEECCCCccccc--------------------------Ccc---cCcCCEEECcCCccCcc-cC---cCCcCCEEECcC
Confidence 6666666666543 222 14455555555555541 10 014566666666
Q ss_pred ceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccE
Q 048205 523 NQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQY 602 (1027)
Q Consensus 523 N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~ 602 (1027)
|++++. + .+ .++|++|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++
T Consensus 307 N~l~~i-~----------~~------~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~ 361 (454)
T 1jl5_A 307 NEIRSL-C----------DL------PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQ 361 (454)
T ss_dssp SCCSEE-C----------CC------CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCE
T ss_pred CcCCcc-c----------CC------cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccE
Confidence 665321 0 01 1356666666666664 4543 355666666666666 3555 3566666
Q ss_pred EEccCCcccc--CccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCC
Q 048205 603 LFLKYNRLQG--SIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEG 660 (1027)
Q Consensus 603 L~L~~N~l~g--~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g 660 (1027)
|+|++|+++| .+|.+++.+ +.|++.|.+|.. +++|+.|++++|+++|
T Consensus 362 L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 362 LHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLRE 410 (454)
T ss_dssp EECCSSCCSSCCCCCTTCCEE--------ECCC---------------------------
T ss_pred EECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCc
Confidence 6666666666 555555433 234444555542 3445555555555555
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-41 Score=396.36 Aligned_cols=425 Identities=24% Similarity=0.321 Sum_probs=249.4
Q ss_pred CccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCC
Q 048205 91 PSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNL 170 (1027)
Q Consensus 91 p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 170 (1027)
|..+ ..++|++|++++|.+ +.+|.. +..+++|++|++++|++.+..|..++.+++|+.+++++|..
T Consensus 5 p~~~-~~~~L~~L~l~~n~l-~~iP~~-i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------- 70 (454)
T 1jl5_A 5 PRNV-SNTFLQEPLRHSSNL-TEMPVE-AENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------- 70 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------
T ss_pred cccc-ccccchhhhcccCch-hhCChh-HhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------
Confidence 4444 468999999999999 577765 58899999999999999999999999999886666655532
Q ss_pred CCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCC
Q 048205 171 TKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELP 250 (1027)
Q Consensus 171 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~ 250 (1027)
.++++|++++|.+++ +|.. .++|++|++++|.+++ +|.. +++|++|++++|++++ ++
T Consensus 71 ~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~---------------l~ 127 (454)
T 1jl5_A 71 RQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA---------------LS 127 (454)
T ss_dssp HTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC---------------CC
T ss_pred cCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc---------------cc
Confidence 456677777777764 3331 3567777777777775 4533 3677777777777762 11
Q ss_pred ccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccc
Q 048205 251 AKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGV 330 (1027)
Q Consensus 251 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 330 (1027)
. ..++|++|++++|+++ .+| +++.+++|++|++++|++++ +|..+ .+|++|++++|+++++
T Consensus 128 ~----~~~~L~~L~L~~n~l~----------~lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l 188 (454)
T 1jl5_A 128 D----LPPLLEYLGVSNNQLE----------KLP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEEL 188 (454)
T ss_dssp S----CCTTCCEEECCSSCCS----------SCC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSSC
T ss_pred C----CCCCCCEEECcCCCCC----------CCc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCcC
Confidence 1 0146777777777776 344 36677788888888888876 34332 4788888888888874
Q ss_pred cCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCC
Q 048205 331 VPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGN 410 (1027)
Q Consensus 331 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 410 (1027)
| .+.++++|++|++++|++.+ +|.. .++|++|++++|+++ .+|. +..+++|++|++++|++++ +|..
T Consensus 189 -~-~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~--- 255 (454)
T 1jl5_A 189 -P-ELQNLPFLTAIYADNNSLKK-LPDL----PLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL--- 255 (454)
T ss_dssp -C-CCTTCTTCCEEECCSSCCSS-CCCC----CTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---
T ss_pred -c-cccCCCCCCEEECCCCcCCc-CCCC----cCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---
Confidence 4 57888888888888888864 5543 257899999999887 6674 8888999999999999986 4443
Q ss_pred cccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccc
Q 048205 411 LRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTN 490 (1027)
Q Consensus 411 l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~ 490 (1027)
+++|++|++++|+++++|.. .++|++|++++|++++++. ++ .+
T Consensus 256 ~~~L~~L~l~~N~l~~l~~~--------~~~L~~L~ls~N~l~~l~~-----~~------------------------~~ 298 (454)
T 1jl5_A 256 PPSLEALNVRDNYLTDLPEL--------PQSLTFLDVSENIFSGLSE-----LP------------------------PN 298 (454)
T ss_dssp CTTCCEEECCSSCCSCCCCC--------CTTCCEEECCSSCCSEESC-----CC------------------------TT
T ss_pred ccccCEEECCCCcccccCcc--------cCcCCEEECcCCccCcccC-----cC------------------------Cc
Confidence 47889999999998887653 2678888888888875321 11 35
Q ss_pred cceEEecCccccCchhHhhhcc-cccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCcccc
Q 048205 491 LIAIYLGVNKLNGSILIALGKL-KKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLE 569 (1027)
Q Consensus 491 L~~L~L~~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~ 569 (1027)
|++|++++|++++ +..+ ++|++|++++|++++ +|.. +++|++|++++|.+++ +|.
T Consensus 299 L~~L~l~~N~l~~-----i~~~~~~L~~L~Ls~N~l~~--------------lp~~---~~~L~~L~L~~N~l~~-lp~- 354 (454)
T 1jl5_A 299 LYYLNASSNEIRS-----LCDLPPSLEELNVSNNKLIE--------------LPAL---PPRLERLIASFNHLAE-VPE- 354 (454)
T ss_dssp CCEEECCSSCCSE-----ECCCCTTCCEEECCSSCCSC--------------CCCC---CTTCCEEECCSSCCSC-CCC-
T ss_pred CCEEECcCCcCCc-----ccCCcCcCCEEECCCCcccc--------------cccc---CCcCCEEECCCCcccc-ccc-
Confidence 5666666666664 1223 477888888888753 2322 4678888888888884 676
Q ss_pred ccCcccccEEccccccccc--ccchhhccCccccEEEccCCccccCccccccccccccccccccccccC--Cchhhhhcc
Q 048205 570 IGNLKVLVQIDLSINNFSD--VIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFG--IIPISLEKL 645 (1027)
Q Consensus 570 ~~~l~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~--~~p~~l~~l 645 (1027)
.+++|++|++++|++++ .+|.+++.+ +.|++.|.+|.. +++|+.||+++|+++| .+|.+
T Consensus 355 --~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~s---- 417 (454)
T 1jl5_A 355 --LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPES---- 417 (454)
T ss_dssp --CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC--------------------------------------
T ss_pred --hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccccccc---cCcCCEEECCCCcCCccccchhh----
Confidence 47888999999999987 677766543 457788888874 5789999999999988 77865
Q ss_pred cCCcceeccCCCCCCCCCC
Q 048205 646 LDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 646 ~~L~~l~l~~N~l~g~~p~ 664 (1027)
++.|.+.+|.+.+.+|.
T Consensus 418 --l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 418 --VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp -------------------
T ss_pred --HhheeCcCcccCCcccc
Confidence 44556788888888775
No 46
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.7e-42 Score=383.08 Aligned_cols=278 Identities=33% Similarity=0.543 Sum_probs=227.9
Q ss_pred ccHHHHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC
Q 048205 740 FTYLELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD 819 (1027)
Q Consensus 740 ~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 819 (1027)
+++.++...+++|+..+.||+|+||.||+|++++|+.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444556778999999999999999999998889999999987666666788999999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcCC---ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecC
Q 048205 820 FKALVLEYMPYGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGM 896 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgl 896 (1027)
..++||||+++|+|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999987654 35899999999999999999999 89999999999999999999999999999
Q ss_pred CcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCccc-chhHHHHHHHHHhh-hH
Q 048205 897 AKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTG-EMTLKRWVNDLLLI-SI 974 (1027)
Q Consensus 897 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~~-~~ 974 (1027)
++...............||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......|....... ..
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence 98654333333334456899999999999889999999999999999999999999765433 23344444322211 12
Q ss_pred HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 975 MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 975 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...+++... ......++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 266 ~~~~~~~~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 266 EQIVDPNLA------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CSSSSSSCT------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhcChhhc------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 222222221 1123457788999999999999999999999999886
No 47
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=4.6e-41 Score=370.15 Aligned_cols=250 Identities=26% Similarity=0.352 Sum_probs=210.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 467999999999999999999864 7899999999876665667888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
+++|+|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999765 3899999999999999999999 99999999999999999999999999999986643322
Q ss_pred eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 908 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ... +.... .
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~------------~~~~~-----~ 233 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYL------------IATNG-----T 233 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHH------------HHHHC-----S
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH------------HHhCC-----C
Confidence 33456799999999999999999999999999999999999999976422111 000 00000 0
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.....+..++..+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 234 PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111223456777999999999999999999999986
No 48
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.4e-41 Score=380.15 Aligned_cols=285 Identities=36% Similarity=0.550 Sum_probs=230.0
Q ss_pred ccccccHHHHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeE
Q 048205 736 NQRRFTYLELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISS 814 (1027)
Q Consensus 736 ~~~~~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~ 814 (1027)
..+.|++.++....++|+..+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4467889999999999999999999999999999988899999999875432 223468899999999999999999999
Q ss_pred EecCCeeEEEEEecCCCCHHHHHhcCC---ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEE
Q 048205 815 CSSDDFKALVLEYMPYGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHL 891 (1027)
Q Consensus 815 ~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl 891 (1027)
+...+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||..+..+|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999997653 34899999999999999999999322239999999999999999999999
Q ss_pred eeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCC---cccchhHHHHHHH
Q 048205 892 SDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDES---FTGEMTLKRWVND 968 (1027)
Q Consensus 892 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~---~~~~~~~~~~~~~ 968 (1027)
+|||+++...... ........||+.|+|||++.+..++.++||||+||++|||++|+.||... .........|+..
T Consensus 176 ~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999998664332 23344456999999999999889999999999999999999999999632 1223344555443
Q ss_pred HHhhh-HHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 969 LLLIS-IMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 969 ~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
..... .....+.... ......++..+.+++.+||+.||++|||++|++++|++
T Consensus 255 ~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQ------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TTSSCCSTTSSCTTCT------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred HhhchhhhhhcChhhc------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 32211 2222222211 11234567789999999999999999999999999974
No 49
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=372.20 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=213.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|+..+.||+|+||+||+|++. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 356888999999999999999976 6899999998766666778899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
+++|+|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999887777999999999999999999999 9999999999999999999999999999998664322211
Q ss_pred ------------eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH
Q 048205 908 ------------TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM 975 (1027)
Q Consensus 908 ------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1027)
......||+.|+|||++.+..++.++||||+||++|||++|..|+.............. .
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~--------~ 237 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNV--------R 237 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCH--------H
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhh--------h
Confidence 11145799999999999999999999999999999999999999876433221111000 0
Q ss_pred HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 976 EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 976 ~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...+. ..+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 238 GFLDR----------YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHHH----------TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccccc----------cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 00111 112345667899999999999999999999999886
No 50
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.5e-40 Score=387.14 Aligned_cols=380 Identities=20% Similarity=0.221 Sum_probs=232.0
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEcccccccee-CcccccCCCCCCEEEccC
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGE-IPEELGNLAELEELWLQN 83 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~-~p~~l~~l~~L~~L~L~~ 83 (1027)
+.++.++++++ .+|. +. ++|++|+|++|.+++..|..++.+++|++|+|++|.+.+. .+..|.++++|++|+|++
T Consensus 13 ~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 13 YNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDY 88 (455)
T ss_dssp TEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTT
T ss_pred cccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCC
Confidence 45677777777 4554 32 6788888888888877777888888888888888887633 356678888888888888
Q ss_pred cccCCccCccccCCCCCCeEeCCcccccccch-hhhhcCCCCCcEEEccCCcCCccCccc-ccCCCCCcEEEccCCcccc
Q 048205 84 NFLTGTIPSSIFNLSSLSNLDLSVNNLTGELL-ANICSNLPLLQTLFLDENNFDGKIPST-LLRCKHLQTLSLSINDFSG 161 (1027)
Q Consensus 84 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~ 161 (1027)
|++++..|..|.++++|++|+|++|++++.++ ...+..+++|++|+|++|++++..|.. |..+++|++|++++|.+++
T Consensus 89 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~ 168 (455)
T 3v47_A 89 NQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKS 168 (455)
T ss_dssp CTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSC
T ss_pred CccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccc
Confidence 88887777788888888888888888875332 234666777777777777777666655 6777777777777777776
Q ss_pred ccCccccCC--CCCcEEEccCccCCCCCChhc--------cCCCCCCeeeccccccCCCCCccccCC---CCCCEEEccC
Q 048205 162 DIPKEIGNL--TKLKYLHLDQNRLQGEIPEEL--------GNLAELEKLQLQNNFLTGTIPPSIFNL---SSLSDLELSF 228 (1027)
Q Consensus 162 ~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~ 228 (1027)
..|..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|.+++..|..+... ++|+.|++++
T Consensus 169 ~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~ 248 (455)
T 3v47_A 169 ICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSN 248 (455)
T ss_dssp CCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTT
T ss_pred cChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecc
Confidence 666666655 566777777777765433322 234455555555555555444444332 4555555555
Q ss_pred ccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCcccc--CcCCccceeccCcccccc
Q 048205 229 NSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIG--NLAKLEKLDLQFNRLQCV 306 (1027)
Q Consensus 229 N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~--~l~~L~~L~L~~N~l~~~ 306 (1027)
|.+.+... ..+.+.+.. +..+. ..++|+.|++++|++++.
T Consensus 249 ~~~~~~~~-----------------------------~~~~~~~~~---------~~~~~~~~~~~L~~L~l~~n~l~~~ 290 (455)
T 3v47_A 249 SYNMGSSF-----------------------------GHTNFKDPD---------NFTFKGLEASGVKTCDLSKSKIFAL 290 (455)
T ss_dssp CTTTSCCT-----------------------------TCCSSCCCC---------TTTTGGGTTSCCCEEECCSSCCCEE
T ss_pred cccccccc-----------------------------chhhhccCc---------ccccccccccCceEEEecCcccccc
Confidence 54432100 001111000 01111 124566666666666666
Q ss_pred CCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccC
Q 048205 307 IPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFN 386 (1027)
Q Consensus 307 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 386 (1027)
.|..|+.+++|++|++++|++.++.|..|.++++|++|+|++|++.+ ++...+..+++|++|+|++|++++..|..|.+
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 369 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGS-IDSRMFENLDKLEVLDLSYNHIRALGDQSFLG 369 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCE-ECGGGGTTCTTCCEEECCSSCCCEECTTTTTT
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCC-cChhHhcCcccCCEEECCCCcccccChhhccc
Confidence 66666666666666666666666666666666666666666665532 22233344555555555555555555555555
Q ss_pred CCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCC
Q 048205 387 TSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSS 427 (1027)
Q Consensus 387 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 427 (1027)
+++|++|+|++|+++++.+..|..+++|++|++++|++++.
T Consensus 370 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 370 LPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccC
Confidence 55555555555555555555555555555555555555543
No 51
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-40 Score=386.84 Aligned_cols=385 Identities=22% Similarity=0.199 Sum_probs=250.4
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCcc-CccccCCCCCCeEeCC
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTI-PSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls 106 (1027)
-+.++++++.++ .+|. +. ++|++|+|++|+|++..|..|+++++|++|+|++|.+.+.+ +..|.++++|++|+|+
T Consensus 12 ~~~~~c~~~~l~-~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls 87 (455)
T 3v47_A 12 GYNAICINRGLH-QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLD 87 (455)
T ss_dssp TTEEECCSSCCS-SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECT
T ss_pred ccccCcCCCCcc-cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCC
Confidence 345777777776 5665 32 66777777777777666777777777777777777765333 4566667777777777
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCccc--ccCCCCCcEEEccCCccccccCcc-ccCCCCCcEEEccCccC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPST--LLRCKHLQTLSLSINDFSGDIPKE-IGNLTKLKYLHLDQNRL 183 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l 183 (1027)
+|+++ .+.+..+.++++|++|+|++|++++..+.. |..+++|++|+|++|.+++..|.. |.++++|++|++++|++
T Consensus 88 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l 166 (455)
T 3v47_A 88 YNQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV 166 (455)
T ss_dssp TCTTC-EECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB
T ss_pred CCccC-ccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc
Confidence 77765 333444555666666666666665533333 555666666666666665544544 55566666666666666
Q ss_pred CCCCChhccCC--CCCCeeeccccccCCCCCcc--------ccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccc
Q 048205 184 QGEIPEELGNL--AELEKLQLQNNFLTGTIPPS--------IFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKF 253 (1027)
Q Consensus 184 ~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~--------~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~ 253 (1027)
++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|++++..|..+ . .
T Consensus 167 ~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~----------~--~ 234 (455)
T 3v47_A 167 KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF----------F--D 234 (455)
T ss_dssp SCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHH----------H--H
T ss_pred cccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhh----------h--c
Confidence 55555555444 45555566666555433222 2234455555555555542211110 0 0
Q ss_pred cCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCc--CcccceeccCccccccc
Q 048205 254 CNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNL--HNLEWMIFSFNKLVGVV 331 (1027)
Q Consensus 254 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~ 331 (1027)
....+.|+.|++++|.+.+.. +..+.+....+..+..+ ++|+.|++++|++.+..
T Consensus 235 ~~~~~~L~~L~l~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 291 (455)
T 3v47_A 235 AIAGTKIQSLILSNSYNMGSS-----------------------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALL 291 (455)
T ss_dssp HTTTCCEEEEECTTCTTTSCC-----------------------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEEC
T ss_pred cccccceeeEeeccccccccc-----------------------cchhhhccCcccccccccccCceEEEecCccccccc
Confidence 011244555555555443210 01112222233333333 68999999999999998
Q ss_pred CccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCc
Q 048205 332 PTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNL 411 (1027)
Q Consensus 332 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 411 (1027)
|..|.++++|++|++++|++.+..|. .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+
T Consensus 292 ~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 292 KSVFSHFTDLEQLTLAQNEINKIDDN-AFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred hhhcccCCCCCEEECCCCcccccChh-HhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 99999999999999999998754444 45578899999999999988888888999999999999999998888999999
Q ss_pred ccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCC
Q 048205 412 RNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILP 457 (1027)
Q Consensus 412 ~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 457 (1027)
++|++|+|++|+|++++.+. +..+++|++|++++|++++..|
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGI----FDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTT----TTTCTTCCEEECCSSCBCCCTT
T ss_pred ccccEEECCCCccccCCHhH----hccCCcccEEEccCCCcccCCC
Confidence 99999999999998877653 2577889999999998887655
No 52
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.6e-41 Score=374.85 Aligned_cols=271 Identities=25% Similarity=0.319 Sum_probs=209.3
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC----eeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD----FKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lV 824 (1027)
.++|++.+.||+|+||+||+|++. ++.||||++..... .......|+.++++++||||+++++++.... ..++|
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 356888999999999999999876 79999999975432 3345566899999999999999999998754 46999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCC----------CeEeccCCCCcEEEcCCCcEEEeee
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV----------PIIHCDLKPNNVLLDDNMVAHLSDF 894 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~Dlkp~NIll~~~~~~kl~Df 894 (1027)
|||+++|+|.+++.... +++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 101 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EECCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EecCCCCCHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 99999999999997654 899999999999999999999 88 9999999999999999999999999
Q ss_pred cCCcccccCCCcceecccccCccccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccch-hHHHHHHH
Q 048205 895 GMAKPFLKEDQSLTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEM-TLKRWVND 968 (1027)
Q Consensus 895 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-~~~~~~~~ 968 (1027)
|+++.+.............||+.|+|||++.+ ..++.++||||+||++|||+||+.||........ .+......
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 99987654443333445679999999999886 3566789999999999999999999976533221 11111100
Q ss_pred HHh-hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 969 LLL-ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 969 ~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... ....+...................++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 000 0111111111111111122223456777999999999999999999999999986
No 53
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.2e-40 Score=371.28 Aligned_cols=248 Identities=24% Similarity=0.332 Sum_probs=207.4
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
...+|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 3467999999999999999999974 79999999997543 33456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++|+|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCC-cchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVS-TNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.....+||+.|+|||++.+..+. .++||||+||++|||++|+.||...... ..... +....
T Consensus 169 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~~~--------i~~~~-- 230 (328)
T 3fe3_A 169 ---KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK-----ELRER--------VLRGK-- 230 (328)
T ss_dssp ---GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHCC--
T ss_pred ---ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCC--
Confidence 23456799999999999888765 7999999999999999999999764221 11111 11110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++.++.+++.+||..||++|||++|+++
T Consensus 231 ------~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 231 ------YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ------CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ------CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0112235667899999999999999999999975
No 54
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.3e-41 Score=379.18 Aligned_cols=255 Identities=26% Similarity=0.416 Sum_probs=210.9
Q ss_pred hCCCCccceeeccccceEEEEEec--------CCceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ--------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSD 818 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 818 (1027)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|+++++++ +||||++++++|.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 367889999999999999999853 35579999987543 33456789999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
+..++||||+++|+|.+++.... ..+++.++..++.||++||+||| +.+|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999997643 34789999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhH
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTL 962 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 962 (1027)
+.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+ .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~--~ 314 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--L 314 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--H
Confidence 9999999999999986654333333344567889999999999999999999999999999999 999987643221 1
Q ss_pred HHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 963 KRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 963 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... +.... ....+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 315 ~~~------------~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 315 FKL------------LKEGH------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp HHH------------HHTTC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH------------HhcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 11110 11122356778999999999999999999999999886
No 55
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.5e-40 Score=366.44 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=216.1
Q ss_pred ccccHHHHHHHhCC----------CCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCC
Q 048205 738 RRFTYLELFQATNG----------FSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR 806 (1027)
Q Consensus 738 ~~~~~~~~~~~~~~----------f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ 806 (1027)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45777777776654 677789999999999999976 7999999999876666667889999999999999
Q ss_pred ccceEEeEEecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC
Q 048205 807 NIIKFISSCSSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN 886 (1027)
Q Consensus 807 niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 886 (1027)
||+++++++...+..++||||+++++|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999988753 4899999999999999999999 8999999999999999999
Q ss_pred CcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHH
Q 048205 887 MVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWV 966 (1027)
Q Consensus 887 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~ 966 (1027)
+.+||+|||+++....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~ 253 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRL 253 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999999999986543221 234457999999999999999999999999999999999999999764221 111100
Q ss_pred HHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 967 NDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 967 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
..... ........++..+.+++.+||+.||++|||+.|+++.
T Consensus 254 --------~~~~~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 254 --------RDSPP--------PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --------HHSSC--------CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --------hcCCC--------CCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 1111223456778999999999999999999999863
No 56
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=373.02 Aligned_cols=250 Identities=24% Similarity=0.347 Sum_probs=199.3
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
..++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 4578999999999999999999865 79999999997653 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+++|+|.+++.... .+++..+..++.||+.|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999987654 4899999999999999999999 9999999999999999999999999999998653322
Q ss_pred cceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .... .+....
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-----~~~~--------~i~~~~--- 226 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-----ALYK--------KIMRGK--- 226 (347)
T ss_dssp ---------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHTC---
T ss_pred CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-----HHHH--------HHHcCC---
Confidence 223345679999999999988775 89999999999999999999999764211 1111 111111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++.++.+++.+||..||++|||++|+++
T Consensus 227 -----~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 227 -----YDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -----CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 1112335667889999999999999999999986
No 57
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-40 Score=367.06 Aligned_cols=252 Identities=19% Similarity=0.292 Sum_probs=210.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 467999999999999999999976 68899999987443 3456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC--CCcEEEeeecCCcccccCCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD--NMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfgla~~~~~~~~ 905 (1027)
+++|+|.+++......+++.++..++.|+++|++||| +.+|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~- 158 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD- 158 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC-
Confidence 9999999999877667999999999999999999999 999999999999999987 7899999999998764322
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .... .+.....
T Consensus 159 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~--------~i~~~~~--- 220 (321)
T 1tki_A 159 --NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QIIE--------NIMNAEY--- 220 (321)
T ss_dssp --EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHHH--------HHHHTCC---
T ss_pred --ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-----HHHH--------HHHcCCC---
Confidence 234457999999999999988999999999999999999999999764221 1111 1111111
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.........++.++.+++.+|+..||++|||+.|+++.
T Consensus 221 -~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 221 -TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp -CCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -CCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 11112234567789999999999999999999999873
No 58
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.7e-40 Score=370.72 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=208.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccch------hHHHHHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR------AIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
.+.|++.+.||+|+||+||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999976 6899999999764322 346788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC----cEEEeeecCC
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM----VAHLSDFGMA 897 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfgla 897 (1027)
++||||++||+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999998764 35899999999999999999999 99999999999999998877 7999999999
Q ss_pred cccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
+.+.... .....+||+.|+|||++.+..++.++||||+||++|+|++|++||......+ ... .+
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~-----~~~--------~i 230 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----TLA--------NI 230 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----HHH--------HH
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHH-----HHH--------HH
Confidence 8654322 2344679999999999999999999999999999999999999997642211 111 11
Q ss_pred hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 ~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.... .......+..++..+.+++.+||.+||++|||+.|+++
T Consensus 231 ~~~~----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 231 TAVS----YDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HTTC----CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HhcC----CCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1110 11111233456778999999999999999999999985
No 59
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-40 Score=369.56 Aligned_cols=253 Identities=25% Similarity=0.358 Sum_probs=208.6
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|++.+.||+|+||+||+|++. +++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 367999999999999999999876 789999999875432 234567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++|+|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999887543 4899999999999999999999 999999999999999999999999999999866443333
Q ss_pred ceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......||+.|+|||++.+..+ +.++||||+||++|||++|+.||............|... .
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~------------~---- 225 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK------------K---- 225 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT------------C----
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc------------c----
Confidence 33445679999999999987765 778999999999999999999998754443333333210 0
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
........++.++.+++.+||..||++|||+.|+++
T Consensus 226 --~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 226 --TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp --TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 011112346677899999999999999999999975
No 60
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-40 Score=368.46 Aligned_cols=254 Identities=30% Similarity=0.407 Sum_probs=202.2
Q ss_pred HhCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
...+|++.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 456788999999999999999987 58899999987543 334567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 826 EYMPYGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
||+++|+|.+++.... ..+++..+..++.|+++||+||| +.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 9999999999998654 24899999999999999999999 889 9999999999999999999999999998543
Q ss_pred cCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+ ....
T Consensus 191 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~-----------~~~~ 255 (309)
T 3p86_A 191 ST--FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAV-----------GFKC 255 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHH-----------HHSC
T ss_pred cc--ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHH-----------HhcC
Confidence 22 222344579999999999999999999999999999999999999997642211 11100 0000
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.....+..++.++.+++.+||+.||++|||++|+++.|+
T Consensus 256 ------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 256 ------KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp ------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 011122456778999999999999999999999999886
No 61
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.2e-39 Score=359.09 Aligned_cols=276 Identities=31% Similarity=0.481 Sum_probs=225.7
Q ss_pred ccccHHHHHHHhCCCCcc------ceeeccccceEEEEEecCCceEEEEEEeccc----chhHHHHHHHHHHHhhccCCc
Q 048205 738 RRFTYLELFQATNGFSEN------NLIGRGGFGFVYKARIQDGMEVAVKVFDLQY----GRAIKSFDIECGMIKRIRHRN 807 (1027)
Q Consensus 738 ~~~~~~~~~~~~~~f~~~------~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~n 807 (1027)
..|++.++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|++++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 568899999999999887 8999999999999987 58899999986432 234577889999999999999
Q ss_pred cceEEeEEecCCeeEEEEEecCCCCHHHHHhcC--CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC
Q 048205 808 IIKFISSCSSDDFKALVLEYMPYGSLEKCLYSS--NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD 885 (1027)
Q Consensus 808 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~ 885 (1027)
|+++++++...+..++||||+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999998743 345899999999999999999999 999999999999999999
Q ss_pred CCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHH
Q 048205 886 NMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRW 965 (1027)
Q Consensus 886 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~ 965 (1027)
++.+||+|||+++...............||+.|+|||++.+ .++.++||||+|+++|+|++|+.||...... .....+
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~ 246 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDI 246 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS-SBTTHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch-HHHHHH
Confidence 99999999999986654433334445679999999998765 5889999999999999999999999865332 222333
Q ss_pred HHHHHhh--hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 966 VNDLLLI--SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 966 ~~~~~~~--~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....... ...+.+++.... .+..++..+.+++.+||+.||++||++.++++.|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~ 302 (307)
T 2nru_A 247 KEEIEDEEKTIEDYIDKKMND-------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302 (307)
T ss_dssp HHHHHTTSCCHHHHSCSSCSC-------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHhhhhhhhhhhhccccccc-------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 3222211 123333332211 12356778999999999999999999999999986
No 62
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=370.65 Aligned_cols=255 Identities=26% Similarity=0.429 Sum_probs=208.7
Q ss_pred hCCCCccceeeccccceEEEEEec----CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
..+|++.+.||+|+||+||+|++. .+..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356888999999999999999975 34569999997543 3345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877667999999999999999999999 999999999999999999999999999999876433
Q ss_pred CC-cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 904 DQ-SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 904 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
.. ........+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... ... .+...
T Consensus 205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~------------~~~~~ 270 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VIS------------SVEEG 270 (325)
T ss_dssp --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHH------------HHHTT
T ss_pred ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHH------------HHHcC
Confidence 22 122233456788999999998899999999999999999999 999997642211 111 01111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. ....+..++.++.+++.+||..||++||++.|+++.|+
T Consensus 271 ~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 271 Y------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp C------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 11122356778999999999999999999999999986
No 63
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.7e-40 Score=367.33 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=207.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|+..+.||+|+||+||+|+.+ +|+.||+|++++.. ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 357899999999999999999976 68999999997542 23456788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++......
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999887643 4899999999999999999999 9999999999999999999999999999998543222
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.....
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~--------~i~~~~~-- 222 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFE--------LILMEEI-- 222 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCCC--
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-----HHHH--------HHHcCCC--
Confidence 2334567999999999999999999999999999999999999999764211 1111 0111111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~ 1023 (1027)
..+..++.++.+++.+||+.||++|| +++|+++
T Consensus 223 ------~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 223 ------RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 11234567789999999999999999 8999875
No 64
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.1e-39 Score=361.61 Aligned_cols=269 Identities=23% Similarity=0.284 Sum_probs=209.1
Q ss_pred HhCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
..++|++.+.||+|+||+||+|++.+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 346799999999999999999999889999999986442 223467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+++ ++.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 99 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp ECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred cCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 99985 888888877777999999999999999999999 9999999999999999999999999999998654322
Q ss_pred cceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh---HHH-----
Q 048205 906 SLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS---IME----- 976 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~----- 976 (1027)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ............. ...
T Consensus 174 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 174 -RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp -C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred -ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccc
Confidence 22344578999999999876 568999999999999999999999998654332 2222222111100 000
Q ss_pred -hhhccccC-ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 977 -VVDANLLS-HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 977 -~~d~~~~~-~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+..... ...........++.++.+++.+|+++||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 011111223346678899999999999999999999986
No 65
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4e-40 Score=357.40 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=211.6
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|++.+.||+|+||.||+|+++++..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 457889999999999999999998888999999975433 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
++++|.+++......+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||.++...... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999877667999999999999999999999 9999999999999999999999999999998654322 223
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ ... +....
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~------------~~~~~------ 222 (268)
T 3sxs_A 162 SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV-VLK------------VSQGH------ 222 (268)
T ss_dssp CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHH------------HHTTC------
T ss_pred ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH-HHH------------HHcCC------
Confidence 334456788999999998899999999999999999999 9999876432211 000 00000
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
....+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 223 -~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 223 -RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp -CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred -CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 011122345678999999999999999999999999863
No 66
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-40 Score=375.60 Aligned_cols=266 Identities=23% Similarity=0.377 Sum_probs=215.5
Q ss_pred cccHHHHHHHhCCCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccce
Q 048205 739 RFTYLELFQATNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIK 810 (1027)
Q Consensus 739 ~~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~ 810 (1027)
.+.........++|++.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 3445555566788999999999999999999742 46889999997543 33456789999999999 7999999
Q ss_pred EEeEEecCC-eeEEEEEecCCCCHHHHHhcCCc-----------------------------------------------
Q 048205 811 FISSCSSDD-FKALVLEYMPYGSLEKCLYSSNY----------------------------------------------- 842 (1027)
Q Consensus 811 l~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 842 (1027)
+++++.+.+ ..++||||+++|+|.+++.....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999998755 48999999999999999876532
Q ss_pred ------------------cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 843 ------------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 843 ------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
.+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 1889999999999999999999 9999999999999999999999999999998765444
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.........||+.|+|||++.+..++.++||||+||++|||++ |+.||........ ....+ ....
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~------------~~~~- 313 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRL------------KEGT- 313 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHH------------HHTC-
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHH------------HcCC-
Confidence 4444555678999999999999999999999999999999998 9999976533221 11110 0000
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++|||+.|++++|+
T Consensus 314 -----~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 314 -----RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp -----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 01112345677899999999999999999999999986
No 67
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.2e-39 Score=375.02 Aligned_cols=362 Identities=19% Similarity=0.179 Sum_probs=199.6
Q ss_pred CccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccc
Q 048205 136 DGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSI 215 (1027)
Q Consensus 136 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 215 (1027)
.+..+..+..+++|++|++++|.+++. | .|..+++|++|+|++|++++. | ++.+++|++|++++|++++. + +
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~ 102 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--V 102 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--C
T ss_pred CcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--c
Confidence 334455666677777777777777643 4 566777777777777777653 3 66667777777777777653 2 6
Q ss_pred cCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccc
Q 048205 216 FNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEK 295 (1027)
Q Consensus 216 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~ 295 (1027)
+++++|++|++++|++++ ++ +..+++|++|++++|++++ + .++.+++|++
T Consensus 103 ~~l~~L~~L~L~~N~l~~---------------l~---~~~l~~L~~L~l~~N~l~~----------l--~l~~l~~L~~ 152 (457)
T 3bz5_A 103 TPLTKLTYLNCDTNKLTK---------------LD---VSQNPLLTYLNCARNTLTE----------I--DVSHNTQLTE 152 (457)
T ss_dssp TTCTTCCEEECCSSCCSC---------------CC---CTTCTTCCEEECTTSCCSC----------C--CCTTCTTCCE
T ss_pred CCCCcCCEEECCCCcCCe---------------ec---CCCCCcCCEEECCCCccce----------e--ccccCCcCCE
Confidence 666777777777776652 11 2334444555555554442 1 1334445555
Q ss_pred eeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccc
Q 048205 296 LDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNN 375 (1027)
Q Consensus 296 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~ 375 (1027)
|++++|+..+.. . +..+++|++|++++|++.+ +| +..+++|++|++++|+
T Consensus 153 L~l~~n~~~~~~--~------------------------~~~l~~L~~L~ls~n~l~~-l~---l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 153 LDCHLNKKITKL--D------------------------VTPQTQLTTLDCSFNKITE-LD---VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp EECTTCSCCCCC--C------------------------CTTCTTCCEEECCSSCCCC-CC---CTTCTTCCEEECCSSC
T ss_pred EECCCCCccccc--c------------------------cccCCcCCEEECCCCccce-ec---cccCCCCCEEECcCCc
Confidence 555555322221 2 3344444444444444432 22 2234555555555555
Q ss_pred cCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCC
Q 048205 376 FSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGI 455 (1027)
Q Consensus 376 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 455 (1027)
+++. .+..+++|++|++++|++++ +| ++.+++|++|++++|+++.++. ..++.|+.|++++|.++
T Consensus 203 l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~-------~~l~~L~~L~l~~n~L~-- 267 (457)
T 3bz5_A 203 ITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV-------STLSKLTTLHCIQTDLL-- 267 (457)
T ss_dssp CSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC-------TTCTTCCEEECTTCCCS--
T ss_pred CCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH-------HHCCCCCEEeccCCCCC--
Confidence 5532 24555555555555555554 23 5555556666666665555431 23455555555554332
Q ss_pred CCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCc
Q 048205 456 LPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSF 535 (1027)
Q Consensus 456 ~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~ 535 (1027)
.+++++|.+.+.+| ++.+++|+.|+|++|++.|.+|.
T Consensus 268 -------------~L~l~~n~~~~~~~--------------------------~~~l~~L~~L~Ls~n~~l~~l~~---- 304 (457)
T 3bz5_A 268 -------------EIDLTHNTQLIYFQ--------------------------AEGCRKIKELDVTHNTQLYLLDC---- 304 (457)
T ss_dssp -------------CCCCTTCTTCCEEE--------------------------CTTCTTCCCCCCTTCTTCCEEEC----
T ss_pred -------------EEECCCCccCCccc--------------------------ccccccCCEEECCCCcccceecc----
Confidence 33444444444443 23445555555555554333321
Q ss_pred cccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcc
Q 048205 536 SCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIP 615 (1027)
Q Consensus 536 ~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip 615 (1027)
...+|+.|++++| ++|+.|++++|++++ +| ++.+++|+.|++++|+|+| +
T Consensus 305 ------------~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~-l- 354 (457)
T 3bz5_A 305 ------------QAAGITELDLSQN-------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-F- 354 (457)
T ss_dssp ------------TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB-C-
T ss_pred ------------CCCcceEechhhc-------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC-c-
Confidence 1123333333333 456777777777775 33 6777777777777777775 2
Q ss_pred ccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCC
Q 048205 616 DSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 616 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~ 664 (1027)
+.|+.|++++|+++|. ..+..|..+++++|+++|.||.
T Consensus 355 ------~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 355 ------SSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp ------TTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCT
T ss_pred ------cccccccccCCcEEec-----ceeeecCccccccCcEEEEcCh
Confidence 3566677777777766 3556677777777777777776
No 68
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1e-40 Score=380.27 Aligned_cols=255 Identities=29% Similarity=0.412 Sum_probs=210.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|...+.||+|+||+||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356888899999999999999986 78999999987543 2334568889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++|+|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999876667899999999999999999999 999999999999999999999999999999854322111
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......+++.|+|||++..+.++.++|||||||++|||++ |+.||...... .... .+....
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~------------~~~~~~--- 332 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTRE------------FVEKGG--- 332 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHH------------HHHTTC---
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHH------------HHHcCC---
Confidence 11122235778999999998899999999999999999998 99998764221 1111 111111
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++|||++++++.|+
T Consensus 333 ---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 333 ---RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 11223457778999999999999999999999999886
No 69
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-39 Score=358.90 Aligned_cols=257 Identities=23% Similarity=0.391 Sum_probs=206.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 357899999999999999999865 68999999986432 33457788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999987654 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
........||+.|+|||.+.+..++.++||||+||++|||++|+.||............ ....
T Consensus 166 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~-------------~~~~--- 228 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-------------IQDS--- 228 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHH-------------HSSC---
T ss_pred -ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-------------hhcc---
Confidence 22234457999999999999999999999999999999999999999764321111000 0010
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-CHHHHHHHhh
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-NAKEIVTKLA 1026 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-s~~evl~~L~ 1026 (1027)
........+..++..+.+++.+|+.+||++|| +++++.+.|+
T Consensus 229 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 229 VPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred CCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 01111122345677899999999999999999 8999988875
No 70
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.6e-40 Score=357.91 Aligned_cols=253 Identities=25% Similarity=0.413 Sum_probs=210.9
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||+||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 356888999999999999999998899999999975433 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 163 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTS 163 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccc
Confidence 999999999877777999999999999999999999 9999999999999999999999999999998653221 122
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... ... .+... .
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-----~~~--------~~~~~-~----- 224 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-----VVE--------DISTG-F----- 224 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-----HHH--------HHHTT-C-----
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-----HHH--------HHhcC-c-----
Confidence 233456788999999998999999999999999999999 999987642211 110 00010 0
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++||+++|+++.|+
T Consensus 225 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 225 -RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 01112335667899999999999999999999999986
No 71
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9e-40 Score=368.67 Aligned_cols=251 Identities=22% Similarity=0.333 Sum_probs=205.6
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-----chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-----GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|++.+.||+|+||+||+|+.+ +|+.||||+++... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 45889999999999999999875 68999999997432 1135678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcC---CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc---EEEeeecCC
Q 048205 824 VLEYMPYGSLEKCLYSS---NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV---AHLSDFGMA 897 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfgla 897 (1027)
||||+++|+|.+++... ...+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998877543 245899999999999999999999 999999999999999987654 999999999
Q ss_pred cccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
+...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... .... .+
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~------------~i 244 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFE------------GI 244 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH--HHHH------------HH
T ss_pred eEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH--HHHH------------HH
Confidence 8664322 223456799999999999999999999999999999999999999976311 1000 11
Q ss_pred hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 ~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..... ......+..++.++.+++.+||..||++||++.|+++
T Consensus 245 ~~~~~----~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 245 IKGKY----KMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHTCC----CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCC----CCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11111 1111223456778999999999999999999999985
No 72
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.7e-40 Score=363.07 Aligned_cols=266 Identities=24% Similarity=0.439 Sum_probs=209.2
Q ss_pred hCCCCccceeeccccceEEEEEe-----cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEec--CCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-----QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSS--DDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 821 (1027)
.++|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 35688999999999999999984 2688999999987666667889999999999999999999999855 3568
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887767999999999999999999999 9999999999999999999999999999998764
Q ss_pred cCCCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH-----hhhHH
Q 048205 902 KEDQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL-----LISIM 975 (1027)
Q Consensus 902 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-----~~~~~ 975 (1027)
..... .......+++.|+|||++.+..++.++||||+|+++|||++|..|+...... ...+..... .....
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHH
Confidence 33221 2223345778899999999999999999999999999999999998653211 111110000 00111
Q ss_pred HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 976 EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 976 ~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.+... .....+..++.++.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 243 ELLKNN------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHTT------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcc------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 111111 111223467788999999999999999999999999886
No 73
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-39 Score=370.35 Aligned_cols=253 Identities=18% Similarity=0.282 Sum_probs=210.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++||||+++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357999999999999999999876 6899999999876555566788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC--CCcEEEeeecCCcccccCCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD--NMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfgla~~~~~~~~ 905 (1027)
+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++.+....
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999877667999999999999999999999 999999999999999974 5789999999998764322
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ... . +..... ..
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~--~~~---~--------i~~~~~-~~ 269 (387)
T 1kob_A 206 --IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE--TLQ---N--------VKRCDW-EF 269 (387)
T ss_dssp --CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH--HHH---H--------HHHCCC-CC
T ss_pred --ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH--HHH---H--------HHhCCC-CC
Confidence 2234579999999999999999999999999999999999999997642211 111 0 000000 00
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.......++.++.+++.+||..||++|||+.|+++.
T Consensus 270 ---~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 ---DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 011123456778999999999999999999999863
No 74
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=375.61 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=206.9
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..++|++.+.||+|+||+||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3467999999999999999999865 78999999997653 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc---CCCcEEEeeecCCcccc
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfgla~~~~ 901 (1027)
|||++||+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999887654 4899999999999999999999 99999999999999998 46889999999998654
Q ss_pred cCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
... .......||+.|+|||++.+..++.++||||+||++|+|++|++||......+ ... .+....
T Consensus 165 ~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~--~~~-----------~i~~~~ 229 (444)
T 3soa_A 165 GEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHR--LYQ-----------QIKAGA 229 (444)
T ss_dssp TTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHH-----------HHHHTC
T ss_pred CCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHH--HHH-----------HHHhCC
Confidence 322 22344679999999999999999999999999999999999999997642211 111 000111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
. ... ...+..++.++.+++.+|++.||++|||+.|+++.
T Consensus 230 ~-~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 230 Y-DFP---SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp C-CCC---TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred C-CCC---ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 001 11123467789999999999999999999999863
No 75
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=369.92 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=201.3
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 822 (1027)
..++|++.+.||+|+||+||+|+.+ +|+.||||++++.. ....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 3478999999999999999999976 68999999997542 23456677899999988 6999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999987654 4899999999999999999999 99999999999999999999999999999985432
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ... .+.....
T Consensus 177 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----~~~--------~i~~~~~ 241 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-----LFE--------AILNDEV 241 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHH--------HHHHCCC
T ss_pred C--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHH-----HHH--------HHHcCCC
Confidence 2 223445679999999999999899999999999999999999999997643211 111 1111111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA------KEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~------~evl~ 1023 (1027)
..+..++.++.+++.+|+++||++||++ .|+++
T Consensus 242 --------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 --------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred --------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1122356678999999999999999998 77764
No 76
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=360.94 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=207.4
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccch------hHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR------AIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
++|+..+.||+|+||.||+|+.. +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45888999999999999999976 6899999999754321 3567889999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC----cEEEeeecCCc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM----VAHLSDFGMAK 898 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfgla~ 898 (1027)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999998764 35899999999999999999999 99999999999999999887 89999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
.+.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||......+ ... .+.
T Consensus 167 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~--------~~~ 230 (326)
T 2y0a_A 167 KIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-----TLA--------NVS 230 (326)
T ss_dssp ECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-----HHH--------HHH
T ss_pred ECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-----HHH--------HHH
Confidence 664322 2234579999999999998999999999999999999999999997642211 100 000
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
... ..........++..+.+++.+||..||++|||+.|+++.
T Consensus 231 ~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 231 AVN----YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp HTC----CCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hcC----CCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 001112234567778999999999999999999999863
No 77
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.8e-39 Score=357.03 Aligned_cols=268 Identities=24% Similarity=0.271 Sum_probs=208.1
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
++|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57899999999999999999976 68999999997543 2334678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++ ++.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP--V 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC--C
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc--c
Confidence 9986 677767666667999999999999999999999 999999999999999999999999999999865432 2
Q ss_pred ceecccccCccccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH------Hhhh
Q 048205 907 LTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM------EVVD 979 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------~~~d 979 (1027)
.......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....................... ...+
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2334457899999999988765 79999999999999999999988755433333333322222111000 0000
Q ss_pred ccc---cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 980 ANL---LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 980 ~~~---~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
... .............++.++.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00000011112346677899999999999999999999986
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.1e-40 Score=372.65 Aligned_cols=255 Identities=25% Similarity=0.455 Sum_probs=199.3
Q ss_pred hCCCCccceeeccccceEEEEEec----CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
..+|++.+.||+|+||.||+|++. ++..||||+++... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357999999999999999999865 57789999987543 3345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999887777999999999999999999999 899999999999999999999999999999866432
Q ss_pred CCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 904 DQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 904 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
... .......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .. +.+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~--~~------------~~i~~~ 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD--VI------------KAVDEG 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH--HH------------HHHHTT
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HH------------HHHHcC
Confidence 211 11222235778999999999999999999999999999998 999987542211 11 111111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. ...+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 267 ~~------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 267 YR------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp EE------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 11 1112356778999999999999999999999999885
No 79
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=371.09 Aligned_cols=255 Identities=22% Similarity=0.292 Sum_probs=204.6
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 822 (1027)
..++|+..+.||+|+||+||+|+.+ +++.||||++++.. ....+.+..|..++.++ +||||+++++++.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3467999999999999999999976 68899999998653 23345678899999887 8999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999987654 4899999999999999999999 99999999999999999999999999999985332
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh---HHHHHHHHHhhhHHHhhh
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT---LKRWVNDLLLISIMEVVD 979 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~d 979 (1027)
. .......+||+.|+|||++.+..++.++||||+||++|||++|++||......+.. ...+.. ..+..
T Consensus 206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~-------~~i~~ 276 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF-------QVILE 276 (396)
T ss_dssp T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHH-------HHHHH
T ss_pred C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHH-------HHHhc
Confidence 2 22345568999999999999999999999999999999999999999754221110 011100 01111
Q ss_pred ccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 048205 980 ANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA------KEIVT 1023 (1027)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~------~evl~ 1023 (1027)
... ..+..++.++.+++.+||+.||++||++ .|+++
T Consensus 277 ~~~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 277 KQI--------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCC--------CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred ccc--------CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 111 1123456778999999999999999985 56654
No 80
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.6e-39 Score=367.54 Aligned_cols=252 Identities=20% Similarity=0.346 Sum_probs=206.8
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|+..+.||+|+||.||+|+.+ +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456999999999999999999876 68999999997543 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC---CcEEEeeecCCccccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfgla~~~~~ 902 (1027)
||+++|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.+ +.+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999887654 5899999999999999999999 9999999999999999865 4599999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|++||...... ..... +.....
T Consensus 184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~~~~--------i~~~~~ 247 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-----RLYAQ--------IKAGAY 247 (362)
T ss_dssp CC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHTCC
T ss_pred Cc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------HHhCCC
Confidence 22 233467999999999999989999999999999999999999999764221 11110 001100
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.. ....+..++.++.+++.+||..||++||++.|+++.
T Consensus 248 -~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 248 -DY---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp -CC---CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred -CC---CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 111223567789999999999999999999998753
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.4e-39 Score=358.03 Aligned_cols=257 Identities=28% Similarity=0.414 Sum_probs=202.8
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..+|+..+.||+|+||+||+|++. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEe
Confidence 467999999999999999999865 368999876432 3345778899999999999999999998764 55799999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred cCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 99999999999877777999999999999999999999 999999999999999999999999999999865433333
Q ss_pred ceecccccCccccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 907 LTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.......||+.|+|||++. ...++.++||||+||++|||++|+.||......+. ....+. ....
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~------------~~~~ 255 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVG------------RGYA 255 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHH------------HTCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHh------------cCCC
Confidence 3344567999999999886 56789999999999999999999999976433211 111100 0000
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. ........++.++.+++.+||+.+|++||++.|+++.|+
T Consensus 256 ~~--~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~ 296 (307)
T 3lb7_A 256 SP--DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp CC--CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHH
T ss_pred Cc--chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHH
Confidence 00 001112356778999999999999999999999999875
No 82
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.6e-39 Score=353.73 Aligned_cols=252 Identities=27% Similarity=0.454 Sum_probs=206.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccch-------hHHHHHHHHHHHhhccCCccceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR-------AIKSFDIECGMIKRIRHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 820 (1027)
.++|+..+.||+|+||+||+|++. +++.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999975 7899999998643221 1267889999999999999999999997765
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEcCCCc-----EEEee
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLDDNMV-----AHLSD 893 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~~~~~-----~kl~D 893 (1027)
++||||+++|+|.+++......+++..+..++.|++.|++||| +.+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999999998877777999999999999999999999 888 999999999999988776 99999
Q ss_pred ecCCcccccCCCcceecccccCccccCccccc--CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 894 FGMAKPFLKEDQSLTQTQTLATIGYMAPEYGR--EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 894 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
||+++.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||...............
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---- 243 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR---- 243 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH----
T ss_pred CCccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh----
Confidence 999984322 234467999999999984 456789999999999999999999999765433221111111
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
.... ....+..++.++.+++.+||+.||++||++.|+++.|++
T Consensus 244 -------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 -------EEGL------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp -------HSCC------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -------ccCC------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1111 111223567789999999999999999999999999874
No 83
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.5e-40 Score=378.35 Aligned_cols=262 Identities=19% Similarity=0.244 Sum_probs=211.1
Q ss_pred HHHHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEec
Q 048205 742 YLELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSS 817 (1027)
Q Consensus 742 ~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 817 (1027)
+.++....++|+..+.||+|+||+||+|+++ +++.||||++++.. ....+.+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444456788999999999999999999977 58899999997532 1223447889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCC
Q 048205 818 DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 897 (1027)
Q Consensus 818 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla 897 (1027)
.+..++||||++||+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999999999876667999999999999999999999 999999999999999999999999999999
Q ss_pred cccccCCCcceecccccCccccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhh
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLI 972 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 972 (1027)
+...... .......+||++|+|||++. ...++.++||||+||++|||++|++||......+ .....
T Consensus 223 ~~~~~~~-~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i------- 293 (437)
T 4aw2_A 223 LKLMEDG-TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKI------- 293 (437)
T ss_dssp EECCTTS-CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHH-------
T ss_pred hhcccCC-CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhh-------
Confidence 8654332 23334468999999999987 5678999999999999999999999998642211 11111
Q ss_pred hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 048205 973 SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEE--RINAKEIVT 1023 (1027)
Q Consensus 973 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~--Rps~~evl~ 1023 (1027)
.......... .....++.++.+++.+|+..+|++ ||+++|+++
T Consensus 294 -----~~~~~~~~~p---~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 294 -----MNHKERFQFP---TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -----HTHHHHCCCC---SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -----hhccccccCC---cccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1000000000 001235667899999999998888 999999975
No 84
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5e-40 Score=375.82 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=208.8
Q ss_pred HHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCC
Q 048205 744 ELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD 819 (1027)
Q Consensus 744 ~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 819 (1027)
++....++|+..+.||+|+||+||+|+++ +++.||+|++.+.. ....+.+.+|+++++.++||||++++++|.+.+
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445688999999999999999999976 68999999997532 122345788999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..++||||++||+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+|+.
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~ 217 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEe
Confidence 999999999999999998764 3899999999999999999999 99999999999999999999999999999986
Q ss_pred cccCCCcceecccccCccccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGREGR----VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM 975 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1027)
+.... .......+||+.|+|||++.+.. ++.++||||+||++|||++|++||...... ......
T Consensus 218 ~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i---------- 285 (410)
T 3v8s_A 218 MNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKI---------- 285 (410)
T ss_dssp CCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHH----------
T ss_pred eccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHH----------
Confidence 54322 22334568999999999988665 789999999999999999999999764221 111111
Q ss_pred HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCC--CCCHHHHHHH
Q 048205 976 EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEE--RINAKEIVTK 1024 (1027)
Q Consensus 976 ~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~--Rps~~evl~~ 1024 (1027)
..... ...++....++.++.+++.+|+..+|++ ||+++||+++
T Consensus 286 --~~~~~----~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 286 --MNHKN----SLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp --HTHHH----HCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred --Hhccc----cccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 11000 0011112245677899999999999998 9999999863
No 85
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=358.55 Aligned_cols=245 Identities=26% Similarity=0.311 Sum_probs=205.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||+||+|+.+ +|+.||+|++++.. ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357899999999999999999976 78999999997542 23456778899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999997654 4899999999999999999999 99999999999999999999999999999986532
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ... ..+.....
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-----~~~--------~~i~~~~~-- 220 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-----KTY--------EKILNAEL-- 220 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-----HHH--------HHHHHCCC--
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHH--------HHHHhCCC--
Confidence 223457999999999999999999999999999999999999999764221 110 11111111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~ 1023 (1027)
..+..++.++.+++.+|+..||++|| +++|+++
T Consensus 221 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 ------RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ------CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11224566789999999999999999 8888875
No 86
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.7e-39 Score=356.34 Aligned_cols=267 Identities=24% Similarity=0.291 Sum_probs=204.8
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
++|+..+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 57889999999999999999998899999999875432 2346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 986 999998877667899999999999999999999 9999999999999999999999999999998653221 1
Q ss_pred eecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh------HHH--hh
Q 048205 908 TQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS------IME--VV 978 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~--~~ 978 (1027)
......+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+ ............. ..+ .+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccc
Confidence 23345689999999998764 58999999999999999999999997643221 1122111111000 000 00
Q ss_pred hccccC-ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 979 DANLLS-HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 979 d~~~~~-~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
++.... ...........++.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 110000 000011112346778899999999999999999999986
No 87
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=371.29 Aligned_cols=255 Identities=26% Similarity=0.403 Sum_probs=211.3
Q ss_pred hCCCCccceeeccccceEEEEEec--------CCceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ--------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSD 818 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 818 (1027)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888999999999999999853 23579999997553 33457788999999999 999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
+..++||||+++|+|.+++.... ..+++.++..++.||++||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999997653 35899999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhH
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTL 962 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 962 (1027)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~---- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE---- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH----
Confidence 9999999999999987654433334445567899999999999999999999999999999999 99998764211
Q ss_pred HHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 963 KRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 963 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
++.. .+.... ....+..++.++.+++.+||+.||++||+++|+++.|+
T Consensus 301 -~~~~---------~~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 301 -ELFK---------LLKEGH------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -HHHH---------HHHTTC------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHH---------HHHcCC------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 111110 01112346778999999999999999999999999886
No 88
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.9e-39 Score=355.28 Aligned_cols=263 Identities=27% Similarity=0.388 Sum_probs=203.4
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhh--ccCCccceEEeEEec----CCeeE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKR--IRHRNIIKFISSCSS----DDFKA 822 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~~~~ 822 (1027)
.++|++.+.||+|+||+||+|++ +++.||||++... ..+.+..|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46799999999999999999987 6899999998743 23445556666665 799999999998654 34689
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeccCCCCcEEEcCCCcEEEeeecCC
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 897 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla 897 (1027)
+||||+++|+|.+++... .+++..+..++.|+++|++|||.. ++.+|+||||||+||+++.++.+||+|||++
T Consensus 83 lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a 160 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160 (301)
T ss_dssp EEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCe
Confidence 999999999999999654 489999999999999999999932 2678999999999999999999999999999
Q ss_pred cccccCCCcc--eecccccCccccCcccccCC------CCCcchhHHHHHHHHHHHHcC----------CCCCCCCcccc
Q 048205 898 KPFLKEDQSL--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTR----------KKPTDESFTGE 959 (1027)
Q Consensus 898 ~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltg----------~~p~~~~~~~~ 959 (1027)
+......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.||.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~ 240 (301)
T 3q4u_A 161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240 (301)
T ss_dssp EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSS
T ss_pred eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCC
Confidence 8654332221 12334799999999999876 456799999999999999999 88887654333
Q ss_pred hhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 960 MTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.....+..... .+.. ............++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 241 ~~~~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 298 (301)
T 3q4u_A 241 PSFEDMRKVVC-------VDQQ--RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLT 298 (301)
T ss_dssp CCHHHHHHHHT-------TSCC--CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred cchhhhhHHHh-------ccCC--CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHh
Confidence 32222211110 0111 1111111223457788999999999999999999999999986
No 89
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=363.79 Aligned_cols=246 Identities=25% Similarity=0.354 Sum_probs=204.1
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..+|.+.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 367999999999999999999974 78999999997542 22345788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+ +|+|.+++.... .+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 9999 679999887654 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.....+||+.|+|||++.+..+ ++++||||+||++|+|++|+.||........ ....
T Consensus 163 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------------~~~i-- 220 (336)
T 3h4j_B 163 ---FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------------FKKV-- 220 (336)
T ss_dssp ---TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------------BCCC--
T ss_pred ---ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------------HHHH--
Confidence 2234579999999999988776 7899999999999999999999976422110 0000
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.......+..++.++.+++.+|+..||++|||++|+++
T Consensus 221 --~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 221 --NSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp --CSSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred --HcCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 01111223346677899999999999999999999975
No 90
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=367.20 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=201.7
Q ss_pred CccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEecCCC
Q 048205 753 SENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYMPYG 831 (1027)
Q Consensus 753 ~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~g 831 (1027)
...+.||+|+||.||+|+.. +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 33568999999999999865 68999999998765566678999999999999999999999999999999999999999
Q ss_pred CHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE--cCCCcEEEeeecCCcccccCCCccee
Q 048205 832 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL--DDNMVAHLSDFGMAKPFLKEDQSLTQ 909 (1027)
Q Consensus 832 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll--~~~~~~kl~Dfgla~~~~~~~~~~~~ 909 (1027)
+|.+++......+++..+..++.||++||+||| +.+|+||||||+||++ +.++.+||+|||+++.+.... ..
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~ 245 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KL 245 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---cc
Confidence 999998877667999999999999999999999 9999999999999999 567899999999998764332 22
Q ss_pred cccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchh
Q 048205 910 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKH 989 (1027)
Q Consensus 910 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 989 (1027)
....||+.|+|||++....++.++||||+||++|||++|+.||......+ .+.. +...... . .
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~------------i~~~~~~-~---~ 308 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE-TLNN------------ILACRWD-L---E 308 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH------------HHHTCCC-S---C
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH------------HHhccCC-C---C
Confidence 34569999999999999999999999999999999999999997643211 1111 1111110 0 0
Q ss_pred hhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 990 FVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 990 ~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
......++.++.+++.+||..||++||++.|+++
T Consensus 309 ~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 309 DEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1122346778999999999999999999999987
No 91
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=373.42 Aligned_cols=254 Identities=25% Similarity=0.404 Sum_probs=207.8
Q ss_pred CCCCccceeeccccceEEEEEec------CCceEEEEEEecc-cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQ-YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
++|+..+.||+|+||+||+|++. +++.||||++... .......+.+|+.++++++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888999999999999999843 4678999998644 2344567888999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCC------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEEee
Q 048205 823 LVLEYMPYGSLEKCLYSSN------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM---VAHLSD 893 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~D 893 (1027)
+||||+++|+|.+++.... ..+++.+++.++.||++||+||| +.+|+||||||+||+++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999987643 45899999999999999999999 99999999999999999555 599999
Q ss_pred ecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhh
Q 048205 894 FGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLI 972 (1027)
Q Consensus 894 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 972 (1027)
||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~------- 298 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEF------- 298 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH-------
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHH-------
Confidence 999986543333333444568999999999999999999999999999999998 99998764221 11111
Q ss_pred hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 973 SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 973 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.... ....+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 299 -----i~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 299 -----VTSGG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp -----HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----HHcCC------CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11110 01112356677899999999999999999999999885
No 92
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9.7e-40 Score=365.00 Aligned_cols=253 Identities=23% Similarity=0.389 Sum_probs=201.4
Q ss_pred CCCCccceeeccccceEEEEEec-CCce----EEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGME----VAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|+..+.||+|+||+||+|++. +++. ||+|.+.... ....+.+.+|++++++++||||++++++|.+.. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 56888999999999999999865 4544 5777765332 234577899999999999999999999998765 789
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
|+||+.+|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999887777999999999999999999999 899999999999999999999999999999876544
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
..........+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... ... .+....
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~------------~~~~~~ 236 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISS------------ILEKGE 236 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH------------HHHTTC
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HHH------------HHHcCC
Confidence 44334444567889999999999999999999999999999999 999997653221 111 111111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++||+++|+++.|+
T Consensus 237 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 237 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp ------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred ------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11122346677899999999999999999999999875
No 93
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=357.65 Aligned_cols=270 Identities=19% Similarity=0.277 Sum_probs=209.4
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCC--eeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD--FKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV~ 825 (1027)
++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999976 58999999997543 234567789999999999999999999998755 789999
Q ss_pred EecCCCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----cCCCcEEEeeecCCcc
Q 048205 826 EYMPYGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL----DDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfgla~~ 899 (1027)
||+++++|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997654 23899999999999999999999 9999999999999999 7888999999999986
Q ss_pred cccCCCcceecccccCccccCccccc--------CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGR--------EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
+.... ......||+.|+|||++. +..++.++||||+||++|||++|+.||............. .....
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~-~~~~~ 241 (319)
T 4euu_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM-YKIIT 241 (319)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHH-HHHHH
T ss_pred cCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHH-HHHhc
Confidence 64332 223456999999999876 5678999999999999999999999997543332222211 11111
Q ss_pred hhHHHhhh-------ccc--cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 972 ISIMEVVD-------ANL--LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 972 ~~~~~~~d-------~~~--~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+... ... .............++..+.+++.+||++||++|||++|+++...
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp HCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence 10000000 000 00001111223567778999999999999999999999998753
No 94
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=367.75 Aligned_cols=257 Identities=28% Similarity=0.428 Sum_probs=211.3
Q ss_pred HHhCCCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCC
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD 819 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 819 (1027)
...++|+..+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 44678999999999999999999875 34789999987543 334567899999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcCC-----------------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 048205 820 FKALVLEYMPYGSLEKCLYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDL 876 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 876 (1027)
..++||||+++|+|.+++.... ..+++.+++.++.||++||+||| +.+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999987642 45899999999999999999999 999999999
Q ss_pred CCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCC
Q 048205 877 KPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDES 955 (1027)
Q Consensus 877 kp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~ 955 (1027)
||+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999986543332233344568899999999998899999999999999999999 99999764
Q ss_pred cccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 956 FTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... .... .+.+... ...+..++.++.+++.+||+.||++||++.++++.|+
T Consensus 281 ~~~-----~~~~--------~~~~~~~-------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 281 AHE-----EVIY--------YVRDGNI-------LACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp CHH-----HHHH--------HHHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ChH-----HHHH--------HHhCCCc-------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 221 1111 0111111 0112356778999999999999999999999999886
No 95
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.4e-39 Score=356.09 Aligned_cols=253 Identities=22% Similarity=0.379 Sum_probs=207.5
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||+||+|++.++..||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457888999999999999999999888999999975433 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
++++|.+++......+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~ 177 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHS
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccc
Confidence 999999999876667999999999999999999999 9999999999999999999999999999998653221 122
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
.....+|+.|+|||++.+..++.++||||+|+++|||++ |+.||........ .. .+.....
T Consensus 178 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--~~------------~~~~~~~---- 239 (283)
T 3gen_A 178 SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--AE------------HIAQGLR---- 239 (283)
T ss_dssp TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HH------------HHHTTCC----
T ss_pred ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--HH------------HHhcccC----
Confidence 233456788999999998899999999999999999998 9999976432110 00 0111110
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...+..++..+.+++.+||+.||++|||++|+++.|+
T Consensus 240 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 240 --LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp --CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 1112334567899999999999999999999999886
No 96
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=4.5e-39 Score=360.32 Aligned_cols=258 Identities=20% Similarity=0.199 Sum_probs=208.7
Q ss_pred hCCCCccceeeccccceEEEEEe-cCCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|+..+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36789999999999999999996 4789999999875432 34678899999999 99999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc-----EEEeeecCCcccc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV-----AHLSDFGMAKPFL 901 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfgla~~~~ 901 (1027)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 89999999876667999999999999999999999 999999999999999998887 9999999998764
Q ss_pred cCCCcc-----eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHH
Q 048205 902 KEDQSL-----TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIME 976 (1027)
Q Consensus 902 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1027)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~--- 236 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDTK--- 236 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHHH---
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhhh---
Confidence 332211 1245679999999999999999999999999999999999999998753221 111111110000
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... ........++ ++.+++.+|+..||++||++.++.+.|+
T Consensus 237 -----~~~---~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 237 -----RAT---PIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp -----HHS---CHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred -----ccC---CHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 000 0001112345 7999999999999999999999999875
No 97
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=364.74 Aligned_cols=257 Identities=23% Similarity=0.378 Sum_probs=210.5
Q ss_pred HhCCCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecCC
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDD 819 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 819 (1027)
..++|+..+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 3467899999999999999999862 45689999997542 33457788999999999 8999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcCCc----------------------cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNY----------------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLK 877 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 877 (1027)
..++||||+++|+|.+++..... .+++..+..++.||++||+||| +.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999976542 3789999999999999999999 9999999999
Q ss_pred CCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCc
Q 048205 878 PNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESF 956 (1027)
Q Consensus 878 p~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~ 956 (1027)
|+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||+| |+.||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987655444444455667889999999998999999999999999999998 999997653
Q ss_pred ccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 957 TGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... ..... +..... ...+..++.++.+++.+||..||++||++.|+++.|+
T Consensus 280 ~~~-~~~~~------------~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 280 VDA-NFYKL------------IQNGFK------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CSH-HHHHH------------HHTTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cHH-HHHHH------------HhcCCC------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 321 11111 111110 1112345677999999999999999999999999886
No 98
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4.3e-39 Score=364.77 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=204.7
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+++++.++||||++++++|.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56889999999999999999876 68899999997542 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+.||+|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.+|.+||+|||+++.+...
T Consensus 95 e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp CCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred ecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 9999999999987653 4899999999999999999999 999999999999999999999999999999865432
Q ss_pred cceecccccCccccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 906 SLTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
......+||+.|+|||++.. ..++.++||||+||++|||++|+.||....... ........ ....
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~---------~~~~ 236 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTF---------ETTV 236 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHH---------HHCC
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHH---------hhcc
Confidence 23345679999999999874 458999999999999999999999997543221 11111110 0110
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC-HHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN-AKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps-~~evl~ 1023 (1027)
...+..++.++.+++.+||..||++||+ ++++++
T Consensus 237 -------~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 237 -------VTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -------CCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -------cCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 0112345677899999999999999998 777654
No 99
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-38 Score=349.94 Aligned_cols=259 Identities=14% Similarity=0.124 Sum_probs=210.3
Q ss_pred hCCCCccceeeccccceEEEEEe-cCCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++.+ +|++++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 478999999986443 235678899999999 79999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc-----EEEeeecCCcccc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV-----AHLSDFGMAKPFL 901 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~-----~kl~Dfgla~~~~ 901 (1027)
|+ +++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 88999999877667999999999999999999999 999999999999999987776 9999999998765
Q ss_pred cCCCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHH
Q 048205 902 KEDQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIME 976 (1027)
Q Consensus 902 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1027)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...+ ....
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~-~~~~------ 234 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKY-ERIG------ 234 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHH-HHHH------
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHH-HHHH------
Confidence 43221 123455799999999999999999999999999999999999999987432211 1111 0000
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... ..........++.++.+++.+||+.||++||+++++++.|+
T Consensus 235 --~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 235 --EKKQ---STPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp --HHHH---HSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred --hhcc---CccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 0000 00011112356778999999999999999999999999886
No 100
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.2e-39 Score=365.05 Aligned_cols=250 Identities=23% Similarity=0.327 Sum_probs=204.7
Q ss_pred HHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCe
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 820 (1027)
....++|+..+.||+|+||.||+|+++ +|+.||||++++.. ....+.+..|.+++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999976 68999999997542 23456677899998877 89999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 999999999999999987643 4899999999999999999999 999999999999999999999999999999854
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .. .. +...
T Consensus 169 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~---~~--------i~~~ 233 (345)
T 1xjd_A 169 MLGD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--LF---HS--------IRMD 233 (345)
T ss_dssp CCTT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HH---HH--------HHHC
T ss_pred ccCC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHH--HH---HH--------HHhC
Confidence 3222 22345679999999999999999999999999999999999999997642211 11 10 0001
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHH-HHH
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAK-EIV 1022 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~-evl 1022 (1027)
.. ..+..++.++.+++.+|+..||++||++. |++
T Consensus 234 ~~--------~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 234 NP--------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC--------CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC--------CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 00 11123567789999999999999999987 654
No 101
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.2e-39 Score=360.39 Aligned_cols=255 Identities=25% Similarity=0.418 Sum_probs=211.2
Q ss_pred hCCCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
.++|.+.+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 456888999999999999999852 45789999987543 34457788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCC-----------------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCC
Q 048205 822 ALVLEYMPYGSLEKCLYSSN-----------------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKP 878 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp 878 (1027)
++||||+++|+|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997643 24889999999999999999999 99999999999
Q ss_pred CcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcc
Q 048205 879 NNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFT 957 (1027)
Q Consensus 879 ~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~ 957 (1027)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433333444567889999999998899999999999999999999 9999976432
Q ss_pred cchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 958 GEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. .... +.... ....+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 259 ~~--~~~~------------~~~~~------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 259 ER--LFNL------------LKTGH------RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp GG--HHHH------------HHTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HH--HHHH------------hhcCC------cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 21 1111 11110 01112356778999999999999999999999999886
No 102
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=373.00 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=209.5
Q ss_pred HHHHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEec
Q 048205 742 YLELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSS 817 (1027)
Q Consensus 742 ~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 817 (1027)
+.+.....++|+..+.||+|+||+||+|+.+ +|+.||||++++.. ....+.+.+|.+++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444456788999999999999999999976 79999999997532 2234557889999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCC
Q 048205 818 DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 897 (1027)
Q Consensus 818 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla 897 (1027)
.+..++||||++||+|.+++.+.+..+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876556899999999999999999999 999999999999999999999999999999
Q ss_pred cccccCCCcceecccccCccccCccccc-------CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGR-------EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
+.+.... .......+||+.|+|||++. ...++.++||||+||++|||++|+.||......+ .....+...
T Consensus 210 ~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~- 286 (412)
T 2vd5_A 210 LKLRADG-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHYK- 286 (412)
T ss_dssp EECCTTS-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHH-
T ss_pred eeccCCC-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhcc-
Confidence 8664332 22334467999999999987 4578999999999999999999999997643211 111111000
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCC---CCHHHHHH
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEER---INAKEIVT 1023 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~R---ps~~evl~ 1023 (1027)
+ .. .. ...+..++.++.+++.+|+. +|++| |+++|+++
T Consensus 287 -----~----~~-~~----p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 287 -----E----HL-SL----PLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -----H----HC-CC----C----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -----c----Cc-CC----CccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 0 00 00 01123467788999999999 99998 58999875
No 103
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.6e-39 Score=358.49 Aligned_cols=256 Identities=24% Similarity=0.384 Sum_probs=212.1
Q ss_pred hCCCCccceeeccccceEEEEEe------cCCceEEEEEEecccc-hhHHHHHHHHHHHhhc-cCCccceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI------QDGMEVAVKVFDLQYG-RAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 820 (1027)
.++|+..+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788999999999999999985 2467899999975533 3457788999999999 99999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCc-----------------cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 821 KALVLEYMPYGSLEKCLYSSNY-----------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
.++||||+++|+|.+++..... .+++..+..++.|+++||+||| +.+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999876542 4899999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhH
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTL 962 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 962 (1027)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||........ .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~ 257 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-F 257 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH-H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH-H
Confidence 9999999999999987655443333445567889999999998999999999999999999999 9999876533221 1
Q ss_pred HHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 963 KRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 963 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... +...... ..+..++.++.+++.+|++.||++||++.|+++.|+
T Consensus 258 ~~~------------~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 303 (313)
T 1t46_A 258 YKM------------IKEGFRM------LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE 303 (313)
T ss_dssp HHH------------HHHTCCC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH------------hccCCCC------CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 111 1111100 112345677899999999999999999999999986
No 104
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=4.3e-39 Score=361.37 Aligned_cols=253 Identities=23% Similarity=0.301 Sum_probs=204.5
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 824 (1027)
++|+..+.||+|+||.||+|+.+ +++.||||++.+.. ....+.+.+|.++++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56889999999999999999976 68999999998643 23456678899999988 899999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999999987644 4899999999999999999999 9999999999999999999999999999998543222
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh---HHHHHHHHHhhhHHHhhhcc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT---LKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~ 981 (1027)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ..... ...+....
T Consensus 165 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-------~~~i~~~~ 235 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL-------FQVILEKQ 235 (345)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH-------HHHHHHCC
T ss_pred --CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH-------HHHHHcCC
Confidence 2334567999999999999999999999999999999999999999753221110 00000 00111111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH------HHHHH
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA------KEIVT 1023 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~------~evl~ 1023 (1027)
. ..+..++.++.+++.+||+.||++||++ .|+++
T Consensus 236 ~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 236 I--------RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp C--------CCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred C--------CCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 1 1123456778999999999999999995 56654
No 105
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=7.7e-39 Score=367.04 Aligned_cols=272 Identities=18% Similarity=0.266 Sum_probs=206.3
Q ss_pred hCCCCccceeecc--ccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRG--GFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G--~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
..+|++.+.||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3568889999999 99999999976 79999999998653 3345678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 824 VLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999987652 45899999999999999999999 99999999999999999999999999999875432
Q ss_pred CCC-----cceecccccCccccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhh---
Q 048205 903 EDQ-----SLTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLI--- 972 (1027)
Q Consensus 903 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 972 (1027)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||............+.......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 211 111233478999999999987 5789999999999999999999999976533322211111100000
Q ss_pred ---hH----------------HHh---hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 973 ---SI----------------MEV---VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 973 ---~~----------------~~~---~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .+. ..+............+..++.++.+|+.+||++||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00 000 0000000001111234456778999999999999999999999985
No 106
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.8e-39 Score=361.09 Aligned_cols=256 Identities=24% Similarity=0.451 Sum_probs=193.6
Q ss_pred HhCCCCccceeeccccceEEEEEecC-C---ceEEEEEEecc--cchhHHHHHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQD-G---MEVAVKVFDLQ--YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
..++|+..+.||+|+||+||+|++.. + ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 45679999999999999999998763 3 27999998754 344567889999999999999999999999877655
Q ss_pred ------EEEEEecCCCCHHHHHhcCC-----ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 048205 822 ------ALVLEYMPYGSLEKCLYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 890 (1027)
Q Consensus 822 ------~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 890 (1027)
++||||+++|+|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999886432 25899999999999999999999 99999999999999999999999
Q ss_pred EeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHH
Q 048205 891 LSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDL 969 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 969 (1027)
|+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |+.||......+. ...
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--~~~---- 251 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI--YNY---- 251 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--HHH----
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH--HHH----
Confidence 999999987654433333344557889999999999999999999999999999999 8999876533211 110
Q ss_pred HhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 970 LLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 970 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.... ....+..++.++.+++.+||+.||++|||+.++++.|+
T Consensus 252 -------~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 252 -------LIGGN-------RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp -------HHTTC-------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -------HhcCC-------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 01111 01112346677999999999999999999999999886
No 107
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=9.7e-40 Score=364.80 Aligned_cols=253 Identities=23% Similarity=0.370 Sum_probs=203.6
Q ss_pred CCCCccceeeccccceEEEEEec-CCce----EEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGME----VAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
++|+..+.||+|+||+||+|++. +++. ||+|++.... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccEE
Confidence 56888999999999999999865 4554 7777765332 2334567789999999999999999999864 56889
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999877667899999999999999999999 999999999999999999999999999999977554
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
..........+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... .... +....
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--~~~~------------~~~~~ 234 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE--VPDL------------LEKGE 234 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH--HHHH------------HHTTC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH--HHHH------------HHcCC
Confidence 44444455678889999999998999999999999999999999 999998643221 1111 11110
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||..||++||+++|+++.|+
T Consensus 235 ------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 235 ------RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp ------BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred ------CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 01112235556789999999999999999999999885
No 108
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=8.6e-38 Score=363.96 Aligned_cols=317 Identities=21% Similarity=0.199 Sum_probs=145.5
Q ss_pred cccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCC
Q 048205 45 EIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPL 124 (1027)
Q Consensus 45 ~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 124 (1027)
.++.+++|++|++++|.+++ +| .++.+++|++|+|++|++++. | ++.+++|++|++++|++++ ++ +..+++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~~ 107 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD---VTPLTK 107 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC---CTTCTT
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee---cCCCCc
Confidence 34444444444444444442 22 344444444444444444432 2 4444444444444444442 11 334444
Q ss_pred CcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccc
Q 048205 125 LQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQN 204 (1027)
Q Consensus 125 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 204 (1027)
|++|++++|++++. + +..+++|++|++++|.+++. .++.+++|++|++++|+..+.+ .++.+++|++|++++
T Consensus 108 L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~ 179 (457)
T 3bz5_A 108 LTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSF 179 (457)
T ss_dssp CCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCC
Confidence 44444444444432 1 44444455555555544432 1444445555555555332222 244445555555555
Q ss_pred cccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCC
Q 048205 205 NFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIP 284 (1027)
Q Consensus 205 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p 284 (1027)
|++++ +| +..+++|+.|++++|++++ ++ +..+++|++|++++|++++ +|
T Consensus 180 n~l~~-l~--l~~l~~L~~L~l~~N~l~~---------------~~---l~~l~~L~~L~Ls~N~l~~----------ip 228 (457)
T 3bz5_A 180 NKITE-LD--VSQNKLLNRLNCDTNNITK---------------LD---LNQNIQLTFLDCSSNKLTE----------ID 228 (457)
T ss_dssp SCCCC-CC--CTTCTTCCEEECCSSCCSC---------------CC---CTTCTTCSEEECCSSCCSC----------CC
T ss_pred Cccce-ec--cccCCCCCEEECcCCcCCe---------------ec---cccCCCCCEEECcCCcccc----------cC
Confidence 55543 22 4444555555555555442 10 2234444555555554442 22
Q ss_pred ccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCC
Q 048205 285 KEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLP 364 (1027)
Q Consensus 285 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~ 364 (1027)
++.+++|+.|++++|+++++. ++.+++|+.|++++| +|+.|++++|.+.+.+|. ..++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~~---~~l~ 286 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQA---EGCR 286 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEEC---TTCT
T ss_pred --ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCcccc---cccc
Confidence 334455555555555555432 233444444444443 233445555555444442 2345
Q ss_pred CccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccE
Q 048205 365 NLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEY 444 (1027)
Q Consensus 365 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~ 444 (1027)
+|++|+|++|...+.+|. ...+|+.|++++| ++|++|++++|+|++++ +..|+.|+.
T Consensus 287 ~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l~-------l~~l~~L~~ 343 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTELD-------VSHNTKLKS 343 (457)
T ss_dssp TCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSCCC-------CTTCTTCSE
T ss_pred cCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCCcccccc-------cccCCcCcE
Confidence 556666666655555443 2334444444433 45666666666665542 235566666
Q ss_pred eeccCCCCCC
Q 048205 445 FSISNNPLGG 454 (1027)
Q Consensus 445 L~Ls~N~l~~ 454 (1027)
|++++|++++
T Consensus 344 L~l~~N~l~~ 353 (457)
T 3bz5_A 344 LSCVNAHIQD 353 (457)
T ss_dssp EECCSSCCCB
T ss_pred EECCCCCCCC
Confidence 6666666554
No 109
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=9.6e-39 Score=362.65 Aligned_cols=265 Identities=18% Similarity=0.229 Sum_probs=207.3
Q ss_pred HhCCCCccceeeccccceEEEEEecC------CceEEEEEEecccchhH-----------HHHHHHHHHHhhccCCccce
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQD------GMEVAVKVFDLQYGRAI-----------KSFDIECGMIKRIRHRNIIK 810 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~e~~~l~~l~h~niv~ 810 (1027)
..++|++.+.||+|+||+||+|++.. ++.||||++........ ..+..|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34579999999999999999998764 47899999875532111 12334566677888999999
Q ss_pred EEeEEecC----CeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc--
Q 048205 811 FISSCSSD----DFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-- 884 (1027)
Q Consensus 811 l~~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-- 884 (1027)
+++++... ...++||||+ +++|.+++......+++.++..++.||+.||+||| +.+|+||||||+||+++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 4589999999 89999999887677999999999999999999999 99999999999999999
Q ss_pred CCCcEEEeeecCCcccccCCCcc-----eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccc
Q 048205 885 DNMVAHLSDFGMAKPFLKEDQSL-----TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGE 959 (1027)
Q Consensus 885 ~~~~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~ 959 (1027)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998764332211 1133459999999999999999999999999999999999999998643322
Q ss_pred hhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 960 MTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..........+..++... ...++.++.+++.+||..+|++||++.++++.|+
T Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 269 -KYVRDSKIRYRENIASLMDKCFP---------AANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp -HHHHHHHHHHHHCHHHHHHHHSC---------TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred -HHHHHHHHHhhhhHHHHHHHhcc---------cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 22222222222223333333221 1245678999999999999999999999999875
No 110
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2e-39 Score=356.16 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=204.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CC-------ceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DG-------MEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 820 (1027)
.++|+..+.||+|+||+||+|++. ++ +.||+|++........+.+.+|++++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 356888999999999999999865 33 4699999987666667889999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc--------EEEe
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV--------AHLS 892 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~--------~kl~ 892 (1027)
.++||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999887766999999999999999999999 999999999999999998887 9999
Q ss_pred eecCCcccccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 893 DFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 893 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
|||.+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|..|+............+
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~------ 231 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY------ 231 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH------
T ss_pred cCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh------
Confidence 9999975422 123458899999999987 678999999999999999999665544332211111100
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
.+... .+..++.++.+++.+||+.||++|||++|+++.|++
T Consensus 232 ------~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 232 ------EDRHQ---------LPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp ------HTTCC---------CCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred ------hccCC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 00000 011234457899999999999999999999999874
No 111
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.2e-39 Score=354.38 Aligned_cols=249 Identities=25% Similarity=0.339 Sum_probs=198.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--------------------------hhHHHHHHHHHHHh
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--------------------------RAIKSFDIECGMIK 801 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~e~~~l~ 801 (1027)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467899999999999999999865 689999999875421 12356889999999
Q ss_pred hccCCccceEEeEEec--CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 048205 802 RIRHRNIIKFISSCSS--DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPN 879 (1027)
Q Consensus 802 ~l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~ 879 (1027)
+++||||+++++++.+ .+..++||||+++++|.+++.. ..+++.++..++.|+++||+||| +.+|+||||||+
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~ 166 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPS 166 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHH
Confidence 9999999999999986 5688999999999999886543 35899999999999999999999 999999999999
Q ss_pred cEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCCCc
Q 048205 880 NVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLMETFTRKKPTDESF 956 (1027)
Q Consensus 880 NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~ 956 (1027)
||+++.++.+||+|||+++.+.... .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999998664332 2234567999999999988665 4788999999999999999999997542
Q ss_pred ccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 957 TGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ..+... +...... +.....++.++.+++.+||+.||++||++.|+++
T Consensus 245 ~-----~~~~~~--------~~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 I-----MCLHSK--------IKSQALE------FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp H-----HHHHHH--------HHHCCCC------CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred H-----HHHHHH--------HhcccCC------CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1 111110 0011110 0111245677899999999999999999999975
No 112
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.2e-39 Score=361.79 Aligned_cols=249 Identities=20% Similarity=0.274 Sum_probs=205.2
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 822 (1027)
..++|+..+.||+|+||.||+|+.+ +|+.||||++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4578999999999999999999976 58899999997542 23456678899999888 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999987644 4899999999999999999999 99999999999999999999999999999985432
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.....
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~~~--------~i~~~~~ 238 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-----ELFQ--------SIMEHNV 238 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCCC
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-----HHHH--------HHHhCCC
Confidence 22 2334567999999999999999999999999999999999999999764221 1111 1111111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN-----AKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps-----~~evl~ 1023 (1027)
..+..++.++.+++.+|+..||++||+ ++|+++
T Consensus 239 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp --------CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred --------CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 112346677899999999999999995 577764
No 113
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=5.3e-39 Score=361.10 Aligned_cols=245 Identities=21% Similarity=0.246 Sum_probs=205.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 357899999999999999999976 68999999997542 23456788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999987654 4899999999999999999999 999999999999999999999999999999865322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.....
T Consensus 195 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~--------~i~~~~~-- 255 (350)
T 1rdq_E 195 ----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-----QIYE--------KIVSGKV-- 255 (350)
T ss_dssp ----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCCC--
T ss_pred ----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-----HHHH--------HHHcCCC--
Confidence 23457999999999999999999999999999999999999999764211 1111 1111111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC-----HHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN-----AKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps-----~~evl~ 1023 (1027)
..+..++.++.+++.+||+.||++||+ ++|+++
T Consensus 256 ------~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 ------RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ------CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ------CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 112346677899999999999999998 888875
No 114
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.3e-39 Score=349.92 Aligned_cols=250 Identities=28% Similarity=0.418 Sum_probs=196.2
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccc----hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG----RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..+|+..+.||+|+||.||+|++. ++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357889999999999999999975 88999999864422 2356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCC---eEeccCCCCcEEEcC--------CCcEEEee
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP---IIHCDLKPNNVLLDD--------NMVAHLSD 893 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~Dlkp~NIll~~--------~~~~kl~D 893 (1027)
|||+++++|.+++... .+++..+..++.|+++|++||| +.+ |+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 5899999999999999999999 777 999999999999986 77899999
Q ss_pred ecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh
Q 048205 894 FGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS 973 (1027)
Q Consensus 894 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 973 (1027)
||.++.+.... .....||+.|+|||++.+..++.++||||+|+++|||++|+.||........ ..
T Consensus 160 fg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~--------- 224 (271)
T 3dtc_A 160 FGLAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AY--------- 224 (271)
T ss_dssp CCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HH---------
T ss_pred CCccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HH---------
Confidence 99998654322 2245689999999999998999999999999999999999999976432111 00
Q ss_pred HHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 974 IMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 974 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
....... ....+..++..+.+++.+||+.||++|||+.|++++|++
T Consensus 225 --~~~~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 225 --GVAMNKL------ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp --HHHTSCC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred --hhhcCCC------CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 0001110 111223566789999999999999999999999999874
No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-38 Score=354.23 Aligned_cols=265 Identities=27% Similarity=0.387 Sum_probs=203.0
Q ss_pred HHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhh--ccCCccceEEeEEecC---
Q 048205 744 ELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKR--IRHRNIIKFISSCSSD--- 818 (1027)
Q Consensus 744 ~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~--- 818 (1027)
......++|++.+.||+|+||.||+|++. ++.||||++.... ...+..|.+++.. ++||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445578999999999999999999876 8999999986432 2334445555554 4899999999999877
Q ss_pred -CeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCC--------CeEeccCCCCcEEEcCCCcE
Q 048205 819 -DFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV--------PIIHCDLKPNNVLLDDNMVA 889 (1027)
Q Consensus 819 -~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~Dlkp~NIll~~~~~~ 889 (1027)
...++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 181 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTC 181 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCE
T ss_pred CCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCE
Confidence 7889999999999999999765 4899999999999999999999 77 99999999999999999999
Q ss_pred EEeeecCCcccccCCCc--ceecccccCccccCcccccCCCCCcc------hhHHHHHHHHHHHHcC----------CCC
Q 048205 890 HLSDFGMAKPFLKEDQS--LTQTQTLATIGYMAPEYGREGRVSTN------GDVYSFGIMLMETFTR----------KKP 951 (1027)
Q Consensus 890 kl~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwslGvil~elltg----------~~p 951 (1027)
||+|||+++.+...... .......||+.|+|||++.+.....+ +||||+||++|||++| +.|
T Consensus 182 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p 261 (337)
T 3mdy_A 182 CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLP 261 (337)
T ss_dssp EECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccccccc
Confidence 99999999866433221 11234579999999999987766554 9999999999999999 566
Q ss_pred CCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 952 TDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
|............+.. ...................++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 262 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 262 YHDLVPSDPSYEDMRE---------IVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTTSCSSCCHHHHHH---------HHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HhhhcCCCCchhhhHH---------HHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 6544333222222211 11111111111122223468888999999999999999999999999986
No 116
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=6.4e-39 Score=351.96 Aligned_cols=257 Identities=28% Similarity=0.433 Sum_probs=195.8
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..+|+..+.||+|+||+||+|++. ..||||+++... ....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 467999999999999999999865 359999987543 33457789999999999999999999965 4556899999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999877777999999999999999999999 999999999999999999999999999999865433333
Q ss_pred ceecccccCccccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 907 LTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.......||+.|+|||++. ...++.++||||+|+++|||++|+.||....... .....+ .....
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~------------~~~~~ 243 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMV------------GRGSL 243 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHH------------HHTSC
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHh------------ccccc
Confidence 3344567999999999986 5678899999999999999999999997643221 111111 11110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
... .......++.++.+++.+||+.||++||++.|+++.|+
T Consensus 244 ~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 284 (289)
T 3og7_A 244 SPD--LSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE 284 (289)
T ss_dssp CCC--TTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Ccc--hhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 000 00112356778999999999999999999999999986
No 117
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.3e-38 Score=347.05 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=209.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356889999999999999999976 78999999997543 3345778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.+..+......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999988654 35899999999999999999999 999999999999999999999999999999865433322
Q ss_pred ceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......|++.|+|||++.+..+ +.++||||+|+++|||++|+.||............|.. ..
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------------~~---- 225 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE------------KK---- 225 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT------------TC----
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh------------cc----
Confidence 23345678999999999987765 77899999999999999999999875443333333321 00
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
........++..+.+++.+|++.||++|||+.|+++
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 226 --TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 011112345677899999999999999999999975
No 118
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=361.92 Aligned_cols=252 Identities=22% Similarity=0.357 Sum_probs=198.5
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccC--CccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRH--RNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688999999999999999998889999999997543 3345778899999999987 9999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
||+ .+++|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++ ++.+||+|||+++.+....
T Consensus 88 ~e~-~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp ECC-CSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred EeC-CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 995 5779999998754 4899999999999999999999 99999999999999997 6889999999998765443
Q ss_pred CcceecccccCccccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh
Q 048205 905 QSLTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS 973 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 973 (1027)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.........
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~------------ 229 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------ 229 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH------------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHH------------
Confidence 3333445679999999999864 67899999999999999999999999754321111
Q ss_pred HHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 974 IMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 974 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.....++.... ..+...+.++.+++.+||+.||++|||+.|+++.
T Consensus 230 ~~~~~~~~~~~------~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 230 LHAIIDPNHEI------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHHCTTSCC------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhcCCccc------CCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11122221111 1112334568899999999999999999999863
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=8.2e-39 Score=360.32 Aligned_cols=252 Identities=23% Similarity=0.318 Sum_probs=192.4
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..++|++.+.||+|+||.||+|++. +++.||||+++... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3467899999999999999999976 58899999997543 34567889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCCcccccC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla~~~~~~ 903 (1027)
|+++|+|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred eCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 999999999987654 4899999999999999999999 999999999999999975 899999999999865322
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||............ +......
T Consensus 205 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~------------i~~~~~~ 269 (349)
T 2w4o_A 205 ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR------------ILNCEYY 269 (349)
T ss_dssp -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH------------HHTTCCC
T ss_pred ---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH------------HHhCCCc
Confidence 1233457999999999999999999999999999999999999999764322111111 1111110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
. .......++.++.+++.+|+..||++||++.|+++.
T Consensus 270 ~----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 F----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp C----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011123466778999999999999999999999863
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.6e-39 Score=359.07 Aligned_cols=254 Identities=22% Similarity=0.332 Sum_probs=197.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCe----
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF---- 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 820 (1027)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 467999999999999999999964 78999999997543 2335678899999999999999999999876543
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999987654 4899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCCCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhh
Q 048205 901 LKEDQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVD 979 (1027)
Q Consensus 901 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 979 (1027)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ... ...
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~------------~~~ 233 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQ------------HVR 233 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH------------HHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHH------------Hhc
Confidence 433221 223345689999999999999999999999999999999999999976432111 000 000
Q ss_pred ccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 980 ANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ...........++.++.+++.+||+.||++||++.++++
T Consensus 234 ~----~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 234 E----DPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp C----CCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred C----CCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 1 111111223456778999999999999999997777664
No 121
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=353.27 Aligned_cols=244 Identities=22% Similarity=0.247 Sum_probs=196.8
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|+..+.||+|+||+||+|++. +|+.||||++..... ........|+..+.++ +||||++++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 56999999999999999999976 799999999865432 2333445555555555 8999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 999 66999988877777999999999999999999999 899999999999999999999999999999865432
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......||+.|+|||++.+ .++.++||||+||++|||++|..|+.... .|. .+....
T Consensus 211 -~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~-------~~~---------~~~~~~---- 268 (311)
T 3p1a_A 211 -GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE-------GWQ---------QLRQGY---- 268 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------HHH---------HHTTTC----
T ss_pred -CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHH---------HHhccC----
Confidence 22344569999999998875 78999999999999999999987765421 110 011100
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.....+..++.++.+++.+||++||++|||++|+++
T Consensus 269 --~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 269 --LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011233456788999999999999999999999986
No 122
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.1e-39 Score=351.26 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=197.0
Q ss_pred hCCCCccceeeccccceEEEEEecC----CceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQD----GMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
.++|++.+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|++++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578889999999999999998642 4579999986533 334567889999999999999999999985 456899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999877767999999999999999999999 999999999999999999999999999999865432
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. ........+++.|+|||++....++.++||||+||++|||++ |+.||......+ .... +....
T Consensus 170 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~-----------i~~~~- 234 (281)
T 1mp8_A 170 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGR-----------IENGE- 234 (281)
T ss_dssp ----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHH-----------HHTTC-
T ss_pred c-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHH-----------HHcCC-
Confidence 2 122233456789999999998899999999999999999997 999997653221 1111 00100
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 235 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 235 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 01122356778999999999999999999999999886
No 123
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=9.9e-39 Score=361.22 Aligned_cols=253 Identities=23% Similarity=0.297 Sum_probs=195.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|+..+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 467999999999999999999976 789999999975432 336688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc--EEEeeecCCcccccCCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV--AHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfgla~~~~~~~~ 905 (1027)
+++|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999999987644 4899999999999999999999 999999999999999987765 999999999743221
Q ss_pred cceecccccCccccCcccccCCCCCcc-hhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||........ ....+.. +.....
T Consensus 172 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~--------~~~~~~-- 239 (361)
T 3uc3_A 172 -SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQR--------ILSVKY-- 239 (361)
T ss_dssp ----------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHH--------HHTTCC--
T ss_pred -CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHH--------HhcCCC--
Confidence 22344579999999999988877655 8999999999999999999986533221 1221111 111111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.......++.++.+++.+||..||++|||+.|+++.
T Consensus 240 ----~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 ----SIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ----CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ----CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 111112356678999999999999999999999863
No 124
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-38 Score=355.27 Aligned_cols=248 Identities=20% Similarity=0.243 Sum_probs=182.6
Q ss_pred cceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCccceEEeEEecCCeeEEEEEecCCCC
Q 048205 755 NNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRNIIKFISSCSSDDFKALVLEYMPYGS 832 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gs 832 (1027)
.+.||+|+||+||+|++. +++.||||++... ....+.+|+++++.++ ||||+++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999976 6899999999743 3456778999999997 9999999999999999999999999999
Q ss_pred HHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEEeeecCCcccccCCCccee
Q 048205 833 LEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM---VAHLSDFGMAKPFLKEDQSLTQ 909 (1027)
Q Consensus 833 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Dfgla~~~~~~~~~~~~ 909 (1027)
|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||+++...... ...
T Consensus 93 L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~ 166 (325)
T 3kn6_A 93 LFERIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPL 166 (325)
T ss_dssp HHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------
T ss_pred HHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Ccc
Confidence 999998754 5899999999999999999999 99999999999999998766 89999999998654322 223
Q ss_pred cccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccc--hhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 910 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGE--MTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 910 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
...+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+. ..........
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~------------~~~i~~~~~~ 234 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI------------MKKIKKGDFS 234 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH------------HHHHTTTCCC
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH------------HHHHHcCCCC
Confidence 44568999999999999999999999999999999999999997643211 011111 1111111111
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.....+..++.++.+++.+||++||++|||++|+++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 122233457788999999999999999999998874
No 125
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4e-39 Score=360.36 Aligned_cols=268 Identities=25% Similarity=0.354 Sum_probs=212.7
Q ss_pred CCCCccceeeccccceEEEEEe-----cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEe--cCCeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARI-----QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCS--SDDFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 822 (1027)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5688899999999999999984 368899999998766666778999999999999999999999886 456789
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999876666999999999999999999999 99999999999999999999999999999987643
Q ss_pred CCCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh-hhHHHhhhc
Q 048205 903 EDQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL-ISIMEVVDA 980 (1027)
Q Consensus 903 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 980 (1027)
.... .......+|+.|+|||++.+..++.++||||+||++|+|++|+.||............+...... ....+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 3221 12234468888999999998889999999999999999999999986532111000000000000 011111111
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. ....+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 260 ~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 260 GQ------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp TC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cc------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 11123457788999999999999999999999999886
No 126
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.3e-38 Score=354.11 Aligned_cols=268 Identities=24% Similarity=0.305 Sum_probs=192.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..+|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999875 689999999975432 234678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCC-----ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 827 YMPYGSLEKCLYSSN-----YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
|++ |+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 49999886432 35899999999999999999999 9999999999999999999999999999998654
Q ss_pred cCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh---HHHh
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS---IMEV 977 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 977 (1027)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .............. ....
T Consensus 160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 236 (317)
T 2pmi_A 160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSV 236 (317)
T ss_dssp SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGG
T ss_pred CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhh
Confidence 322 12334578999999999876 46899999999999999999999999865322 11222211111000 0000
Q ss_pred -----hhccccCccch------hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 -----VDANLLSHEDK------HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 -----~d~~~~~~~~~------~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+.+........ .......++.++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000000 00111245678999999999999999999999975
No 127
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-38 Score=359.04 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=204.1
Q ss_pred HHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecc-----cchhHHHHHHHHHHHhhccCCccceEEeEEecCC
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ-----YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD 819 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 819 (1027)
....++|++.+.||+|+||+||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 455677999999999999999999875 6889999998754 2344578889999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcC---------------------------------------CccCCHHHHHHHHHHHHHHH
Q 048205 820 FKALVLEYMPYGSLEKCLYSS---------------------------------------NYILDIFQRLNIMIDVASAL 860 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~l 860 (1027)
..++||||+++|+|.+++... ...+++..+..++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999988521 12246778889999999999
Q ss_pred HHhhcCCCCCeEeccCCCCcEEEcCCC--cEEEeeecCCcccccCCC--cceecccccCccccCcccccC--CCCCcchh
Q 048205 861 EYLHFGYSVPIIHCDLKPNNVLLDDNM--VAHLSDFGMAKPFLKEDQ--SLTQTQTLATIGYMAPEYGRE--GRVSTNGD 934 (1027)
Q Consensus 861 ~~LH~~~~~~ivH~Dlkp~NIll~~~~--~~kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 934 (1027)
+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ ..++.++|
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 9999 99999999999999998776 899999999986543222 122345679999999999875 67899999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCC
Q 048205 935 VYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEE 1014 (1027)
Q Consensus 935 vwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~ 1014 (1027)
|||+||++|||++|+.||......+. . ..+....... .......++.++.+++.+||..||++
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~~~-~------------~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDADT-I------------SQVLNKKLCF----ENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHH-H------------HHHHHCCCCT----TSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred HHHHHHHHHHHHHCCCCCCCCChHHH-H------------HHHHhccccc----CCcccccCCHHHHHHHHHHcCCChhH
Confidence 99999999999999999976432211 1 1111111111 11122346778999999999999999
Q ss_pred CCCHHHHHHH
Q 048205 1015 RINAKEIVTK 1024 (1027)
Q Consensus 1015 Rps~~evl~~ 1024 (1027)
||++.|+++.
T Consensus 322 Rps~~~~l~h 331 (345)
T 3hko_A 322 RFDAMRALQH 331 (345)
T ss_dssp SCCHHHHHHS
T ss_pred CCCHHHHhcC
Confidence 9999999863
No 128
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.1e-39 Score=349.21 Aligned_cols=253 Identities=25% Similarity=0.403 Sum_probs=210.2
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||.||+|++.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 356888999999999999999998889999999975543 3467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcce
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLT 908 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~ 908 (1027)
++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++..... ....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~ 161 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTS 161 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc-cccc
Confidence 999999999887677899999999999999999999 999999999999999999999999999999865321 1112
Q ss_pred ecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccc
Q 048205 909 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHED 987 (1027)
Q Consensus 909 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 987 (1027)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... .... .+.. ...
T Consensus 162 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~--------~i~~-~~~---- 223 (267)
T 3t9t_A 162 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVE--------DIST-GFR---- 223 (267)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------HHHT-TCC----
T ss_pred cccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH-----HHHH--------HHhc-CCc----
Confidence 233457788999999998899999999999999999999 89998764221 1111 0000 000
Q ss_pred hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 988 KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 988 ~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...+..++..+.+++.+||+.||++||+++|+++.|+
T Consensus 224 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 224 --LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0112235667899999999999999999999999986
No 129
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=358.14 Aligned_cols=254 Identities=23% Similarity=0.383 Sum_probs=200.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceE----EEEEEecc-cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEV----AVKVFDLQ-YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~v----avK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
.++|+..+.||+|+||+||+|++. +++.| |+|.+... .....+.+.+|++++++++||||+++++++.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367899999999999999999865 55554 66666432 2345678889999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+|+||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+..
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887777999999999999999999999 99999999999999999999999999999987654
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
...........+|+.|+|||++.+..++.++||||+||++|||++ |+.||....... ... .+...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~------------~~~~~ 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISS------------ILEKG 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHH------------HHHTT
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHH------------HHHcC
Confidence 443334444567889999999999999999999999999999999 999997653322 111 11111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. ....+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 236 ~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 236 E------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp C------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1 11122346677999999999999999999999999886
No 130
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.5e-39 Score=347.49 Aligned_cols=248 Identities=25% Similarity=0.405 Sum_probs=204.5
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecC--CeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD--DFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lV 824 (1027)
.++|+..+.||+|+||+||+|++. ++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 356889999999999999999985 8899999997543 33456789999999999999999999999887 788999
Q ss_pred EEecCCCCHHHHHhcCCc-cCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 825 LEYMPYGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
|||+++|+|.+++..... .+++..+..++.|+++|++||| +.+ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999987653 5899999999999999999999 888 9999999999999999999999999876422
Q ss_pred cCCCcceecccccCccccCcccccCCCCCc---chhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGREGRVST---NGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
.....||+.|+|||++.+..++. ++||||+||++|||++|+.||......... ....
T Consensus 165 -------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-------------~~~~ 224 (271)
T 3kmu_A 165 -------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG-------------MKVA 224 (271)
T ss_dssp -------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH-------------HHHH
T ss_pred -------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH-------------HHHH
Confidence 22346899999999998765544 799999999999999999999764321110 0011
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... ....+..++.++.+++.+||+.||++|||++|+++.|+
T Consensus 225 ~~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 225 LEGL------RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp HSCC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred hcCC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 01122356778999999999999999999999999886
No 131
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-38 Score=355.46 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=199.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCC-------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD------- 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------- 819 (1027)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||++++++|.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356889999999999999999976 79999999997543 335577899999999999999999999986543
Q ss_pred --------------------------------------------------eeEEEEEecCCCCHHHHHhcCC--ccCCHH
Q 048205 820 --------------------------------------------------FKALVLEYMPYGSLEKCLYSSN--YILDIF 847 (1027)
Q Consensus 820 --------------------------------------------------~~~lV~e~~~~gsL~~~l~~~~--~~~~~~ 847 (1027)
..++||||+++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999998654 335677
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc----------ceecccccCcc
Q 048205 848 QRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS----------LTQTQTLATIG 917 (1027)
Q Consensus 848 ~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~~~gt~~ 917 (1027)
.+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 999999999999999999999999999999876543211 12234579999
Q ss_pred ccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhH
Q 048205 918 YMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCM 997 (1027)
Q Consensus 918 y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 997 (1027)
|+|||++.+..++.++||||+||++|||++|..|+... ..... ..... . ........+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~--------~~~~~----~---~~~~~~~~~ 299 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIIT--------DVRNL----K---FPLLFTQKY 299 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHH--------HHHTT----C---CCHHHHHHC
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHH--------Hhhcc----C---CCcccccCC
Confidence 99999999999999999999999999999987663210 00000 00000 0 111223455
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 998 SFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 998 ~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
+++.+++.+||+.||++||++.|+++.
T Consensus 300 ~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 300 PQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 667899999999999999999999873
No 132
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=7.1e-39 Score=359.37 Aligned_cols=255 Identities=25% Similarity=0.403 Sum_probs=208.7
Q ss_pred hCCCCccceeeccccceEEEEEec--------CCceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ--------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSD 818 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 818 (1027)
.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367889999999999999999863 46789999987543 33456788999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
+..++||||+++|+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999997653 24889999999999999999999 9999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhH
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTL 962 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~ 962 (1027)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||......
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---- 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE---- 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH----
Confidence 9999999999999987654333333344567889999999998889999999999999999999 99998764221
Q ss_pred HHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 963 KRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 963 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
..... +..... ...+..++.++.+++.+||+.||++||++.|+++.|+
T Consensus 267 -~~~~~---------~~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 267 -ELFKL---------LKEGHR------MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp -HHHHH---------HHHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHHH---------HhcCCC------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11110 000000 0112346677999999999999999999999999886
No 133
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-38 Score=364.53 Aligned_cols=251 Identities=22% Similarity=0.358 Sum_probs=199.1
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhcc--CCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIR--HRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.+|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4589999999999999999998889999999997543 334577899999999997 599999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
| +.+++|.+++.... .+++.++..++.||++||+||| +.+|+||||||+||+++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 55779999998754 5788899999999999999999 99999999999999995 58999999999987654333
Q ss_pred cceecccccCccccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhH
Q 048205 906 SLTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISI 974 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 974 (1027)
.......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||......... .
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~------------~ 277 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK------------L 277 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHH------------H
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHH------------H
Confidence 333445679999999999865 46889999999999999999999999754221111 1
Q ss_pred HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 975 MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 975 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
..++++..... .+...+.++.+++.+||..||++||++.|+++.
T Consensus 278 ~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 278 HAIIDPNHEIE------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHCTTSCCC------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhCccccCC------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 12222221111 112235568899999999999999999999853
No 134
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=4.4e-39 Score=355.82 Aligned_cols=265 Identities=23% Similarity=0.412 Sum_probs=207.6
Q ss_pred CCCCccceeeccccceEEEEEe-----cCCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecC--Cee
Q 048205 750 NGFSENNLIGRGGFGFVYKARI-----QDGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD--DFK 821 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 821 (1027)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4478889999999999999983 368899999987543 23457788999999999999999999999876 668
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
++||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667999999999999999999999 9999999999999999999999999999998765
Q ss_pred cCCCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH----hhhHHH
Q 048205 902 KEDQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL----LISIME 976 (1027)
Q Consensus 902 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~----~~~~~~ 976 (1027)
..... .......+|..|+|||++.+..++.++||||+|+++|||++|+.|+...... ......... ......
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHHH
T ss_pred CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHHH
Confidence 43322 2233456888899999999999999999999999999999999986532110 000000000 000111
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...... ....+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 255 ~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 255 TLKEGK------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHTTC------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHhccC------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 111111 11223456778999999999999999999999999986
No 135
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=2.1e-38 Score=345.65 Aligned_cols=250 Identities=23% Similarity=0.307 Sum_probs=207.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456899999999999999999876 5789999999876666678899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccccCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||++..+....
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999887654 4899999999999999999999 9999999999999999 788999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......||+.|+|||++.+ .++.++||||+|+++|||++|+.||......+. ... +.....
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~------------~~~~~~-- 224 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV-MLK------------IREGTF-- 224 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHHCCC--
T ss_pred ---chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHH-HHH------------HHhCCC--
Confidence 2334569999999998865 489999999999999999999999976432111 010 111110
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.........++.++.+++.+|++.||++||++.|+++
T Consensus 225 --~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 225 --TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp --CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred --CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011122356778999999999999999999999975
No 136
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.7e-39 Score=357.00 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=196.0
Q ss_pred hCCCCccceeeccccceEEEEEe----cCCceEEEEEEeccc----chhHHHHHHHHHHHhhccCCccceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI----QDGMEVAVKVFDLQY----GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 820 (1027)
.++|+..+.||+|+||.||+|+. .+|+.||+|++++.. ......+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46789999999999999999986 478999999997542 2334567789999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999987644 4789999999999999999999 999999999999999999999999999999854
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ... .+...
T Consensus 172 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-----~~~--------~i~~~ 236 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-----TID--------KILKC 236 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHH--------HHHHT
T ss_pred ccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-----HHH--------HHHhC
Confidence 3221 22344579999999999999999999999999999999999999997642211 111 11111
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVT 1023 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~ 1023 (1027)
.. ..+..++.++.+++.+||..||++|| ++.|+++
T Consensus 237 ~~--------~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 237 KL--------NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CC--------CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC--------CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 11 11224567789999999999999999 7888875
No 137
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7e-39 Score=356.69 Aligned_cols=265 Identities=23% Similarity=0.380 Sum_probs=214.2
Q ss_pred ccHHHHHHHhCCCCccceeeccccceEEEEEe------cCCceEEEEEEecccc-hhHHHHHHHHHHHhhc-cCCccceE
Q 048205 740 FTYLELFQATNGFSENNLIGRGGFGFVYKARI------QDGMEVAVKVFDLQYG-RAIKSFDIECGMIKRI-RHRNIIKF 811 (1027)
Q Consensus 740 ~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l 811 (1027)
+.........++|++.+.||+|+||+||+|++ .+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 33444445567899999999999999999974 2568899999975433 3456788999999999 79999999
Q ss_pred EeEEecCC-eeEEEEEecCCCCHHHHHhcCCc---------------cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 048205 812 ISSCSSDD-FKALVLEYMPYGSLEKCLYSSNY---------------ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCD 875 (1027)
Q Consensus 812 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~---------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 875 (1027)
++++...+ ..++||||+++|+|.+++..... .+++..+..++.|+++||+||| +.+|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 99987754 58999999999999999976543 2789999999999999999999 99999999
Q ss_pred CCCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCC
Q 048205 876 LKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDE 954 (1027)
Q Consensus 876 lkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~ 954 (1027)
|||+||+++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++||||+||++|||++ |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654444444455668899999999999999999999999999999998 9999976
Q ss_pred CcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 955 SFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...... ....+ ..... ...+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 254 ~~~~~~-~~~~~------------~~~~~------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 254 VKIDEE-FCRRL------------KEGTR------MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCCSHH-HHHHH------------HHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cchhHH-HHHHh------------ccCcc------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 533221 11110 00000 0112235667899999999999999999999999886
No 138
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-38 Score=363.80 Aligned_cols=271 Identities=24% Similarity=0.358 Sum_probs=196.3
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecc--cchhHHHHHHHHHHHhhcc-CCccceEEeEEecCC--e
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ--YGRAIKSFDIECGMIKRIR-HRNIIKFISSCSSDD--F 820 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 820 (1027)
...++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999865 7899999998643 2344567788999999997 999999999997544 7
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||++ |+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+.+
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 899999998 5999988764 4899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCC-------------------CcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccch
Q 048205 901 LKED-------------------QSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEM 960 (1027)
Q Consensus 901 ~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~ 960 (1027)
.... ........+||++|+|||++.+ ..++.++||||+||++|||++|++||.+.... .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~ 238 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM-N 238 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-H
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 3211 1122344679999999999876 67899999999999999999999999865322 1
Q ss_pred hHHHHHHHHHhhhHHHhh-----------h---ccc---cCccchhhh----------HHhhhHHHHHHHHHHhcccCCC
Q 048205 961 TLKRWVNDLLLISIMEVV-----------D---ANL---LSHEDKHFV----------AKEQCMSFVFNLAMKCTIESPE 1013 (1027)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~-----------d---~~~---~~~~~~~~~----------~~~~~~~~l~~Li~~cl~~dP~ 1013 (1027)
.+..............+. + ... .......+. .+..++.++.+|+.+||..||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 222222111111000000 0 000 000000000 0114567899999999999999
Q ss_pred CCCCHHHHHHH
Q 048205 1014 ERINAKEIVTK 1024 (1027)
Q Consensus 1014 ~Rps~~evl~~ 1024 (1027)
+|||++|+++.
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999864
No 139
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.3e-38 Score=371.30 Aligned_cols=248 Identities=28% Similarity=0.413 Sum_probs=206.2
Q ss_pred HhCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC-eeEEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD-FKALVLE 826 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lV~e 826 (1027)
..++|+..+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3467888999999999999999876 7899999997543 4578899999999999999999999987665 7899999
Q ss_pred ecCCCCHHHHHhcCCc-cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 827 YMPYGSLEKCLYSSNY-ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
|+++|+|.+++..... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 9999999999986543 4699999999999999999999 999999999999999999999999999999854221
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+ .... +...
T Consensus 343 ---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~------------i~~~--- 402 (450)
T 1k9a_A 343 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPR------------VEKG--- 402 (450)
T ss_dssp -------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHH------------HHTT---
T ss_pred ---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH------------HHcC---
Confidence 122357889999999999999999999999999999998 999997653221 1111 1111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.+...+..++.++.+++.+||+.||++|||+.++++.|+
T Consensus 403 ---~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 403 ---YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111233467888999999999999999999999999886
No 140
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.4e-39 Score=376.85 Aligned_cols=253 Identities=25% Similarity=0.412 Sum_probs=208.7
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||+||+|++++++.||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 45688889999999999999999888999999997543 34678999999999999999999999987 56789999999
Q ss_pred CCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 829 PYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 829 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
++|+|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YT 340 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-ee
Confidence 9999999997543 35789999999999999999999 9999999999999999999999999999998653211 11
Q ss_pred eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 908 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
......+++.|+|||++....++.++|||||||++|||+| |+.||......+ .... +....
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~--~~~~------------i~~~~---- 402 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE--VIRA------------LERGY---- 402 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--HHHH------------HHHTC----
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHH------------HHcCC----
Confidence 1223346788999999998999999999999999999999 999997642211 1111 11110
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
+...+..++.++.+++.+||+.||++|||+++|++.|++
T Consensus 403 --~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 403 --RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 112234577889999999999999999999999999863
No 141
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-38 Score=368.61 Aligned_cols=247 Identities=25% Similarity=0.352 Sum_probs=206.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..+|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 356889999999999999999976 79999999997542 22356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999987643 5899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .... .+.+...
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~~~--------~i~~~~~- 233 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TLFK--------KICDGIF- 233 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HHHH--------HHHTTCC-
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HHHH--------HHhcCCc-
Confidence 2334579999999999988765 68999999999999999999999764221 1111 1111111
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+..++.++.+++.+||..||++|||+.|+++
T Consensus 234 -------~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 -------YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -------CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 112235667899999999999999999999986
No 142
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.1e-38 Score=352.03 Aligned_cols=252 Identities=20% Similarity=0.302 Sum_probs=207.8
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccch------hHHHHHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR------AIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
.++|++.+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 346889999999999999999976 6899999999754321 356788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC----cEEEeeecCC
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM----VAHLSDFGMA 897 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfgla 897 (1027)
++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999998764 35899999999999999999999 99999999999999999888 7999999999
Q ss_pred cccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
+...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ..... +
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------i 230 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-----ETLAN--------I 230 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHH--------H
T ss_pred eecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-----HHHHH--------H
Confidence 8654322 223456999999999999999999999999999999999999999764221 11110 0
Q ss_pred hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 978 VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 978 ~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.... ..........++..+.+++.+|+..||++|||+.|+++.
T Consensus 231 ~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 231 TSVS----YDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HTTC----CCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred Hhcc----cccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 011112234567779999999999999999999999863
No 143
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.4e-37 Score=363.30 Aligned_cols=352 Identities=26% Similarity=0.351 Sum_probs=278.6
Q ss_pred cCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCe
Q 048205 23 SNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSN 102 (1027)
Q Consensus 23 ~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 102 (1027)
..+++++.|+++++.+. .+|. +..+++|++|+|++|.+++. +. ++++++|++|++++|.+++..+ +.++++|++
T Consensus 43 ~~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~ 116 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTG 116 (466)
T ss_dssp HHHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCE
T ss_pred hHhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCE
Confidence 34678888999888887 4663 78888899999999988844 44 8888899999999998885544 888899999
Q ss_pred EeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCcc
Q 048205 103 LDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNR 182 (1027)
Q Consensus 103 L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 182 (1027)
|++++|++++ ++. +..+++|++|++++|.+.+. ..+..+++|++|+++ |.+.+.. .+.++++|++|++++|+
T Consensus 117 L~L~~n~l~~-~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~ 188 (466)
T 1o6v_A 117 LTLFNNQITD-IDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNK 188 (466)
T ss_dssp EECCSSCCCC-CGG--GTTCTTCSEEEEEEEEECCC--GGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSC
T ss_pred EECCCCCCCC-ChH--HcCCCCCCEEECCCCccCCC--hhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCc
Confidence 9999998874 332 77888999999999988854 358888999999986 4555332 38888999999999999
Q ss_pred CCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccE
Q 048205 183 LQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEE 262 (1027)
Q Consensus 183 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~ 262 (1027)
+++. ..+..+++|++|++++|.+++..| +..+++|+.|++++|++++ + ..+..+++|+.
T Consensus 189 l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~---------------~--~~l~~l~~L~~ 247 (466)
T 1o6v_A 189 VSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD---------------I--GTLASLTNLTD 247 (466)
T ss_dssp CCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC---------------C--GGGGGCTTCSE
T ss_pred CCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc---------------c--hhhhcCCCCCE
Confidence 8854 358888999999999999986554 7778899999999998873 2 13456788888
Q ss_pred EEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcc
Q 048205 263 IYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLK 342 (1027)
Q Consensus 263 L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 342 (1027)
|++++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+.|++++|++.+..+ +..+++|+
T Consensus 248 L~l~~n~l~~~----------~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 312 (466)
T 1o6v_A 248 LDLANNQISNL----------AP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLT 312 (466)
T ss_dssp EECCSSCCCCC----------GG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCS
T ss_pred EECCCCccccc----------hh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCC
Confidence 88888888742 22 6677888999999998887654 7888888899999988887655 77888888
Q ss_pred eEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCC
Q 048205 343 FLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDN 422 (1027)
Q Consensus 343 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 422 (1027)
.|++++|++.+..| +..+++|++|++++|++++. ..+.++++|+.|++++|++++..| +..+++|+.|++++|
T Consensus 313 ~L~L~~n~l~~~~~---~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 313 YLTLYFNNISDISP---VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp EEECCSSCCSCCGG---GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred EEECcCCcCCCchh---hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 88888888876554 34678888888888888764 467888888888888888887766 788888888888888
Q ss_pred CCCCCCCcc
Q 048205 423 YLTSSTSEL 431 (1027)
Q Consensus 423 ~l~~~~~~l 431 (1027)
+++..|...
T Consensus 386 ~~~~~p~~~ 394 (466)
T 1o6v_A 386 AWTNAPVNY 394 (466)
T ss_dssp EEECCCBCC
T ss_pred cccCCchhh
Confidence 888776543
No 144
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.1e-38 Score=345.66 Aligned_cols=251 Identities=20% Similarity=0.346 Sum_probs=205.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999876 68999999997543 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc---EEEeeecCCccccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV---AHLSDFGMAKPFLK 902 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfgla~~~~~ 902 (1027)
||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||.+.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999998887654 4899999999999999999999 999999999999999986655 99999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ... . +.....
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~---~--------~~~~~~ 224 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYA---Q--------IKAGAY 224 (284)
T ss_dssp SC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH---H--------HHHTCC
T ss_pred Cc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HHH---H--------HHhccc
Confidence 22 2234579999999999999999999999999999999999999997642211 111 0 000000
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .......++.++.+++.+|+++||++|||+.|+++
T Consensus 225 -~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 225 -DY---PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -CC---CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cC---CchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 01112345677899999999999999999999986
No 145
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=349.29 Aligned_cols=269 Identities=25% Similarity=0.309 Sum_probs=203.1
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-----hhHHHHHHHHHHHhhcc---CCccceEEeEEecC
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-----RAIKSFDIECGMIKRIR---HRNIIKFISSCSSD 818 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 818 (1027)
..++|++.+.||+|+||+||+|++. +++.||||++..... .....+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4578999999999999999999964 789999999874321 12345667777777665 99999999999876
Q ss_pred C-----eeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEe
Q 048205 819 D-----FKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLS 892 (1027)
Q Consensus 819 ~-----~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~ 892 (1027)
. ..++||||+++ +|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 57999999974 9999987654 34899999999999999999999 9999999999999999999999999
Q ss_pred eecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhh
Q 048205 893 DFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLI 972 (1027)
Q Consensus 893 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 972 (1027)
|||+++.+... .......||+.|+|||++.+..++.++||||+||++|||++|++||...... .............
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~ 238 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLP 238 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH-HHHHHHHHHHCCC
T ss_pred eCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 99999865322 2234567899999999999999999999999999999999999999764322 1222222111100
Q ss_pred hHHHhhh-----cccc--CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 973 SIMEVVD-----ANLL--SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 973 ~~~~~~d-----~~~~--~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
....... .... ............++.++.+++.+|+++||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 239 PEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp CTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 0000 00011112223567789999999999999999999999863
No 146
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.2e-39 Score=362.97 Aligned_cols=245 Identities=27% Similarity=0.315 Sum_probs=194.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc---hhHHHHHHHHHH-HhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG---RAIKSFDIECGM-IKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
.++|+..+.||+|+||.||+|+.+ +++.||||++++... ...+.+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 356899999999999999999976 688999999976532 233455566666 577899999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999987644 4789999999999999999999 999999999999999999999999999999854322
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
.......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .. ..+......
T Consensus 193 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~-----~~--------~~i~~~~~~ 257 (373)
T 2r5t_A 193 --NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-----MY--------DNILNKPLQ 257 (373)
T ss_dssp --CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH-----HH--------HHHHHSCCC
T ss_pred --CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-----HH--------HHHHhcccC
Confidence 223445679999999999999999999999999999999999999997642211 11 111111111
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKE 1020 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~e 1020 (1027)
.+..++.++.+++.+|++.||++||++.+
T Consensus 258 --------~~~~~~~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 258 --------LKPNITNSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp --------CCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred --------CCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence 11245667899999999999999999853
No 147
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.1e-38 Score=366.26 Aligned_cols=271 Identities=22% Similarity=0.265 Sum_probs=199.7
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecC-----C
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD-----D 819 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 819 (1027)
..++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3568999999999999999999876 68899999997542 33456788999999999999999999999766 5
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..++||||+++ +|.+++... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 104 ELYIVLEIADS-DLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CEEEEEECCSE-EHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecCCc-CHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 78999999974 999988764 45899999999999999999999 99999999999999999999999999999987
Q ss_pred cccCCCc--------------------ceecccccCccccCcccc-cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCccc
Q 048205 900 FLKEDQS--------------------LTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTG 958 (1027)
Q Consensus 900 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~ 958 (1027)
....... ......+||++|+|||++ ....++.++||||+||++|||++|..||.....+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6432211 123566899999999986 5667999999999999999999865554322110
Q ss_pred c---------------------------hhHHHHHHHHHhhh-----------HHHhhhccccCccchhhhHHhhhHHHH
Q 048205 959 E---------------------------MTLKRWVNDLLLIS-----------IMEVVDANLLSHEDKHFVAKEQCMSFV 1000 (1027)
Q Consensus 959 ~---------------------------~~~~~~~~~~~~~~-----------~~~~~d~~~~~~~~~~~~~~~~~~~~l 1000 (1027)
. ..+........... ....+.................++.++
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 0 00011111000000 000000000000011111123467889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHH
Q 048205 1001 FNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 1001 ~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.+|+.+||..||++|||++|+++
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~ 361 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALD 361 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhcCCcccCCCHHHHhc
Confidence 99999999999999999999986
No 148
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=9.4e-39 Score=376.64 Aligned_cols=254 Identities=24% Similarity=0.405 Sum_probs=211.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
..+|+..+.||+|+||.||+|+++ +++.||||+++.... ..+.+.+|++++++++||||++++++|...+..++||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 356888899999999999999987 488999999875432 457889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 828 MPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
+++|+|.+++.... ..+++..+..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.+... ..
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD-TY 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTC-CE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCC-ce
Confidence 99999999998643 45899999999999999999999 999999999999999999999999999999865432 12
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.......+++.|+|||++....++.++|||||||++|||++ |+.||....... ... .+....
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~~~------------~~~~~~--- 436 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYE------------LLEKDY--- 436 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHH------------HHHTTC---
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--HHH------------HHHcCC---
Confidence 22233456788999999998999999999999999999999 999987643221 111 111111
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
+...+..++.++.+++.+||+.||++||++.++++.|++
T Consensus 437 ---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 437 ---RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 112234577889999999999999999999999999863
No 149
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2e-38 Score=357.22 Aligned_cols=264 Identities=20% Similarity=0.231 Sum_probs=200.9
Q ss_pred hCCCCccceeeccccceEEEEEec----CCceEEEEEEecccch-----------hHHHHHHHHHHHhhccCCccceEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQYGR-----------AIKSFDIECGMIKRIRHRNIIKFIS 813 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 813 (1027)
.++|++.+.||+|+||.||+|++. +++.||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 356889999999999999999975 5788999998754321 1234567888899999999999999
Q ss_pred EEec----CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC--
Q 048205 814 SCSS----DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM-- 887 (1027)
Q Consensus 814 ~~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-- 887 (1027)
++.. ....++||||+ +++|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9987 77899999999 899999987655 6899999999999999999999 89999999999999999887
Q ss_pred cEEEeeecCCcccccCCCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhH
Q 048205 888 VAHLSDFGMAKPFLKEDQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTL 962 (1027)
Q Consensus 888 ~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~ 962 (1027)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..........
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432211 11244579999999999999999999999999999999999999996533222222
Q ss_pred HHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 963 KRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 963 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
........ ......... ......++.++.+++.+||..||++||+++++++.|+.
T Consensus 271 ~~~~~~~~-~~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 271 QTAKTNLL-DELPQSVLK---------WAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp HHHHHHHH-HTTTHHHHH---------HSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred HHHHHhhc-ccccHHHHh---------hccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 22111110 000000000 00011466789999999999999999999999999863
No 150
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=348.95 Aligned_cols=267 Identities=21% Similarity=0.232 Sum_probs=202.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
++|+..+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999976 589999999865432 235667889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-- 156 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--
Confidence 99999998877654 34899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh--hhHHHhhhc---
Q 048205 907 LTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL--ISIMEVVDA--- 980 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~--- 980 (1027)
.......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+. .......... ......+..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 157 DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccccccc
Confidence 22334578999999999876 6689999999999999999999999976533221 1111111100 000000000
Q ss_pred ---cccCc---cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 981 ---NLLSH---EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 981 ---~~~~~---~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..... ..........++.++.+++.+||++||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 00111112356777999999999999999999999986
No 151
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=346.58 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=187.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 457899999999999999999874 78999999997542 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||.+.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 9999999999999877667899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||........ .. .+...
T Consensus 167 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~------------~~~~~---- 227 (278)
T 3cok_A 167 E--KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-LN------------KVVLA---- 227 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSS----
T ss_pred C--cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-HH------------HHhhc----
Confidence 1 22345689999999999988899999999999999999999999976432211 00 00000
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+..++.++.+++.+||+.||++||+++++++
T Consensus 228 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 ----DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 01112345677899999999999999999999986
No 152
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.5e-38 Score=352.25 Aligned_cols=268 Identities=21% Similarity=0.268 Sum_probs=201.5
Q ss_pred CCCCcc-ceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEE
Q 048205 750 NGFSEN-NLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 750 ~~f~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
+.|++. +.||+|+||.||+|+.. +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457774 78999999999999865 7899999999876555567888999999985 79999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc---EEEeeecCCcccccC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV---AHLSDFGMAKPFLKE 903 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfgla~~~~~~ 903 (1027)
|+++|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999987654 4899999999999999999999 899999999999999998776 999999999865322
Q ss_pred CC-----cceecccccCccccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHH-HHHhh
Q 048205 904 DQ-----SLTQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVN-DLLLI 972 (1027)
Q Consensus 904 ~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~-~~~~~ 972 (1027)
.. .......+||+.|+|||++.. ..++.++||||+||++|||++|+.||......+........ .....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 111223469999999999875 56889999999999999999999999765332211000000 00000
Q ss_pred hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 973 SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 973 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
...+.+.......+ ......++.++.+++.+||+.||++|||+.|+++.
T Consensus 248 ~~~~~i~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 248 MLFESIQEGKYEFP---DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHCCCCCC---HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhccCcccC---chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 01111111111111 11223467789999999999999999999999873
No 153
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=4e-39 Score=359.62 Aligned_cols=258 Identities=23% Similarity=0.417 Sum_probs=210.5
Q ss_pred HHHhCCCCccceeeccccceEEEEEec------CCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecC
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSD 818 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 818 (1027)
....++|++.+.||+|+||.||+|++. +++.||||++..... .....+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 345577999999999999999999864 367899999875432 3455788999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhcCC---------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSN---------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 889 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 889 (1027)
+..++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~ 177 (322)
T 1p4o_A 101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 177 (322)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCE
T ss_pred CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeE
Confidence 99999999999999999987532 34689999999999999999999 9999999999999999999999
Q ss_pred EEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHH
Q 048205 890 HLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVND 968 (1027)
Q Consensus 890 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 968 (1027)
||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... .....
T Consensus 178 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~--- 252 (322)
T 1p4o_A 178 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QVLRF--- 252 (322)
T ss_dssp EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HHHHH---
T ss_pred EECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HHHHH---
Confidence 9999999986544332223334457889999999998899999999999999999999 88898764221 11111
Q ss_pred HHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 969 LLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 969 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+..... ...+..++..+.+++.+||..||++||++.|+++.|+
T Consensus 253 --------~~~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~ 295 (322)
T 1p4o_A 253 --------VMEGGL-------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 295 (322)
T ss_dssp --------HHTTCC-------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHG
T ss_pred --------HHcCCc-------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 111111 0112356677999999999999999999999999986
No 154
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-38 Score=357.51 Aligned_cols=251 Identities=23% Similarity=0.327 Sum_probs=201.1
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|+..+.||+|+||.||+|+.+ +|+.||||+++.... ...+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 456999999999999999999976 689999999975533 234688888888 79999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC----CcEEEeeecCCccccc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfgla~~~~~ 902 (1027)
|++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||++..+ +.+||+|||+++.+..
T Consensus 97 ~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999999987654 4899999999999999999999 9999999999999998543 3599999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .......... ....
T Consensus 173 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~--------~~~~ 240 (342)
T 2qr7_A 173 ENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARIG--------SGKF 240 (342)
T ss_dssp TTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHHHH--------HCCC
T ss_pred CCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHHHc--------cCCc
Confidence 322 233457899999999998888999999999999999999999999764221 1111111111 0110
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
... ...+..++.++.+++.+||..||++||++.|+++
T Consensus 241 -~~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 -SLS---GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp -CCC---STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred -ccC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000 0112346778899999999999999999999875
No 155
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.1e-38 Score=346.06 Aligned_cols=248 Identities=24% Similarity=0.354 Sum_probs=202.6
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
+.++|++.+.||+|+||.||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467999999999999999999876 57899999987542 2234678889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999887653 4899999999999999999999 999999999999999999999999999998644321
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||....... .... +...
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~--------~~~~--- 222 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE-----TYKR--------ISRV--- 222 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHHH--------HHHT---
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH-----HHHH--------HHhC---
Confidence 2234578999999999999999999999999999999999999997642111 1000 0000
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
....+..++..+.+++.+||+.||++||++.|+++.
T Consensus 223 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 223 -----EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -----CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -----CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 001123356678999999999999999999999863
No 156
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=349.77 Aligned_cols=249 Identities=29% Similarity=0.443 Sum_probs=196.5
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEecC
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYMP 829 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 829 (1027)
++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 46888899999999999999875 788999998643 345778899999999999999999999874 4789999999
Q ss_pred CCCHHHHHhcCCc--cCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc-EEEeeecCCcccccCCCc
Q 048205 830 YGSLEKCLYSSNY--ILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV-AHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 830 ~gsL~~~l~~~~~--~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~-~kl~Dfgla~~~~~~~~~ 906 (1027)
+|+|.+++..... .+++..+..++.|+++|++|||..+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 9999999986542 4788999999999999999999332289999999999999998886 799999999754321
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.......... .|. .....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~----------~~~~~----- 221 (307)
T 2eva_A 160 --MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI-MWA----------VHNGT----- 221 (307)
T ss_dssp -------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHH-HHH----------HHTTC-----
T ss_pred --cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHH-HHH----------HhcCC-----
Confidence 223468999999999999999999999999999999999999997643221111 110 00000
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.......++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 222 --~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 222 --RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp --CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 00112345677899999999999999999999999875
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=4.6e-38 Score=367.03 Aligned_cols=266 Identities=22% Similarity=0.223 Sum_probs=199.3
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecc--cchhHHHHHHHHHHHhhccCCccceEEeEEecC------
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ--YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSD------ 818 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 818 (1027)
..++|++.+.||+|+||+||+|++. +|+.||||++... .....+.+.+|+++++.++||||+++++++...
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3578999999999999999999865 6899999999754 234456788999999999999999999999654
Q ss_pred CeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 457999999986 56666643 3889999999999999999999 9999999999999999999999999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhh------
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLI------ 972 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~------ 972 (1027)
.... .......+||++|+|||++.+..++.++||||+||++|||++|+.||.+.... ..+...+......
T Consensus 213 ~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~-~~~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 213 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp -------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred ecCC---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 6532 22344568999999999999999999999999999999999999999764321 1122222111100
Q ss_pred ----hHHHhhhccccCcc------------chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 973 ----SIMEVVDANLLSHE------------DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 973 ----~~~~~~d~~~~~~~------------~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.....++....... ..........+.++.+|+.+||..||++|||++|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00011110000000 00011122336779999999999999999999999863
No 158
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=7.5e-38 Score=350.66 Aligned_cols=262 Identities=22% Similarity=0.289 Sum_probs=208.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCccceEEeEEec--CCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRNIIKFISSCSS--DDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lV 824 (1027)
.++|++.+.||+|+||+||+|+.. +++.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 366889999999999999999864 7899999998743 3467889999999997 9999999999987 6678999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-cEEEeeecCCcccccC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM-VAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~-~~kl~Dfgla~~~~~~ 903 (1027)
|||+++++|.+++.. +++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||+++.+...
T Consensus 112 ~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~ 184 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG 184 (330)
T ss_dssp EECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred EeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence 999999999998854 789999999999999999999 99999999999999999777 8999999999865432
Q ss_pred CCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. ......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.........+.............+.++...
T Consensus 185 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 261 (330)
T 3nsz_A 185 Q---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261 (330)
T ss_dssp C---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTT
T ss_pred C---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhc
Confidence 2 2344578999999999877 67899999999999999999999999765444343443333332222222222111
Q ss_pred cCccc-----------------hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHED-----------------KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~-----------------~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..... ........++.++.+++.+||++||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 10000 001112336788999999999999999999999986
No 159
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.2e-38 Score=369.90 Aligned_cols=271 Identities=21% Similarity=0.246 Sum_probs=188.4
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEec-----CCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSS-----DDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~~ 820 (1027)
.++|++.+.||+|+||+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 467999999999999999999866 78999999986532 3345778899999999999999999999943 357
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.|+||||+. |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 6999988764 45899999999999999999999 999999999999999999999999999999876
Q ss_pred ccCCCc-------------------------ceecccccCccccCcccc-cCCCCCcchhHHHHHHHHHHHHc-------
Q 048205 901 LKEDQS-------------------------LTQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLMETFT------- 947 (1027)
Q Consensus 901 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwslGvil~ellt------- 947 (1027)
...... ......+||++|+|||++ ....++.++||||+||++|||++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~ 286 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCS
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhcccccc
Confidence 432111 123456789999999976 45679999999999999999999
Q ss_pred ----CCCCCCCCcccc-------------------hhHHHHHHHHHhhhHH-----------HhhhccccCccchhhhHH
Q 048205 948 ----RKKPTDESFTGE-------------------MTLKRWVNDLLLISIM-----------EVVDANLLSHEDKHFVAK 993 (1027)
Q Consensus 948 ----g~~p~~~~~~~~-------------------~~~~~~~~~~~~~~~~-----------~~~d~~~~~~~~~~~~~~ 993 (1027)
|+++|.+...-. ..+............. ..................
T Consensus 287 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (458)
T 3rp9_A 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERF 366 (458)
T ss_dssp SGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGS
T ss_pred ccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHC
Confidence 555554421100 0000000000000000 000000000000111112
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 994 EQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 994 ~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
...+.++.+|+.+||..||++|||++|+++.
T Consensus 367 ~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~H 397 (458)
T 3rp9_A 367 PASSADAIHLLKRMLVFNPNKRITINECLAH 397 (458)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3457788999999999999999999999873
No 160
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.2e-38 Score=345.01 Aligned_cols=245 Identities=24% Similarity=0.357 Sum_probs=182.1
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|++.+.||+|+||.||+|++. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999865 78999999987542 233567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+ ++++.+++.... .+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 93 e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 999 668888776654 4899999999999999999999 9999999999999999999999999999998653322
Q ss_pred cceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ..... +....
T Consensus 167 --~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~~--------~~~~~--- 228 (275)
T 2eue_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP-----VLFKN--------ISNGV--- 228 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHTC---
T ss_pred --cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHhCC---
Confidence 2234568999999999987765 78999999999999999999999764211 11110 00000
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++.++.+++.+|++.||++|||+.|+++
T Consensus 229 -----~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 229 -----YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -----CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0112345667899999999999999999999975
No 161
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1e-38 Score=372.38 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=196.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecc---cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ---YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999865 6899999999754 223345677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYS-VPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
|||+++|+|.+++.... .+++..+..++.||++||+||| + .+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 227 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999887654 4899999999999999999999 7 89999999999999999999999999999854322
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+.....
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-----~~~~--------~i~~~~~- 366 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFE--------LILMEEI- 366 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHH--------HHHHCCC-
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHH--------HHHhCCC-
Confidence 2 2334567999999999999999999999999999999999999999764221 1111 0111110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~ 1023 (1027)
..+..++.++.+++.+||+.||++|| +++|+++
T Consensus 367 -------~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 -------RFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -------CCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11234567789999999999999999 9999986
No 162
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-38 Score=372.88 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=208.2
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
..++|+..+.||+|+||.||+|+.. +|+.||||++.+.. ......+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3466999999999999999999976 79999999997542 2234567889999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 824 VLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
||||++||+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++.+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999987654 34899999999999999999999 99999999999999999999999999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. .....+||+.|+|||++.+..++.++||||+||++|||++|+.||........ ....... +....
T Consensus 339 ~~---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~-~~~i~~~---------i~~~~ 405 (576)
T 2acx_A 339 GQ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVERL---------VKEVP 405 (576)
T ss_dssp TC---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC-HHHHHHH---------HHHCC
T ss_pred Cc---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh-HHHHHHH---------hhccc
Confidence 22 23345899999999999999999999999999999999999999986532211 1111110 00000
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~ 1023 (1027)
. ..+..++.++.+++.+||+.||++|| +++|+++
T Consensus 406 ~-------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 406 E-------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp C-------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred c-------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 0 01134567789999999999999999 7888875
No 163
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-38 Score=347.00 Aligned_cols=253 Identities=22% Similarity=0.371 Sum_probs=206.8
Q ss_pred CCCCccc-eeeccccceEEEEEec---CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 750 NGFSENN-LIGRGGFGFVYKARIQ---DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 750 ~~f~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
++|.+.. .||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv 87 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLV 87 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEE
Confidence 4455555 8999999999999854 57889999997643 345677889999999999999999999994 5568999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999877677999999999999999999999 9999999999999999999999999999998764332
Q ss_pred Cc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 905 QS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 905 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||......+ ....+ ....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~~~i------------~~~~ 230 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAFI------------EQGK 230 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH--HHHHH------------HTTC
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHH------------hcCC
Confidence 21 11223346889999999998889999999999999999998 999997643211 11111 1110
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||..||++||++.|+++.|+
T Consensus 231 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 231 ------RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp ------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ------cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 01122356778999999999999999999999999886
No 164
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2e-38 Score=347.89 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=212.1
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..++|++.+.||+|+||.||+|++. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567888999999999999999977 58899999997543 345778899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 827 YMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
|+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.++......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 999999999997643 45899999999999999999999 9999999999999999999999999999998664332
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
........+|+.|+|||++.+..++.++||||+|+++|+|++ |..||....... .... +....
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~--~~~~------------~~~~~-- 229 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--VYEL------------LEKDY-- 229 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHH------------HHTTC--
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH------------HhccC--
Confidence 233344567889999999998999999999999999999999 999987643221 1111 11111
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+|+..||++||++.|+++.|+
T Consensus 230 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 230 ----RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ----CCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 11122356678999999999999999999999999876
No 165
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.3e-38 Score=349.28 Aligned_cols=254 Identities=25% Similarity=0.421 Sum_probs=201.9
Q ss_pred CCCCccceeeccccceEEEEEecC----CceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEe-cCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQD----GMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCS-SDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~l 823 (1027)
.+|+..+.||+|+||+||+|++.+ +..||+|.+.... ....+.+.+|++++++++||||+++++++. ..+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457888999999999999998642 2358999887533 334577889999999999999999999864 5567899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999877777899999999999999999999 999999999999999999999999999999865432
Q ss_pred CC--cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 904 DQ--SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 904 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.. ........+|+.|+|||.+.+..++.++||||+|+++|||++ |.+||........ .... ...
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~-~~~~------------~~~ 248 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYL------------LQG 248 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTH-HHHH------------HTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHH-HHHH------------hcC
Confidence 21 122334567889999999999999999999999999999999 4555554322211 1111 000
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. ....+..++..+.+++.+||+.||++||+++|+++.|+
T Consensus 249 ~-------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 249 R-------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp C-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C-------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0 01112345677999999999999999999999999986
No 166
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.9e-38 Score=355.88 Aligned_cols=257 Identities=24% Similarity=0.396 Sum_probs=210.1
Q ss_pred HhCCCCccceeeccccceEEEEEecC-C-----ceEEEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecCC
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQD-G-----MEVAVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDD 819 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~~-~-----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 819 (1027)
..++|+..+.||+|+||.||+|++.. + +.||+|++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 35679999999999999999998652 3 479999997543 23456788999999999 8999999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcC-------------CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC
Q 048205 820 FKALVLEYMPYGSLEKCLYSS-------------NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN 886 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~ 886 (1027)
..++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 999999999999999998753 234789999999999999999999 8999999999999999999
Q ss_pred CcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHH
Q 048205 887 MVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRW 965 (1027)
Q Consensus 887 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~ 965 (1027)
+.+||+|||+++...............+|+.|+|||++.+..++.++||||+||++|||++ |..||........ ....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-~~~~ 279 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-FYKL 279 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH-HHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH-HHHH
Confidence 9999999999987654443333444567889999999998899999999999999999999 9999876432211 1111
Q ss_pred HHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 966 VNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 966 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+ ..... ...+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 280 ~------------~~~~~------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 280 V------------KDGYQ------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp H------------HHTCC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H------------hcCCC------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 1 11110 0112234667899999999999999999999999886
No 167
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.3e-37 Score=342.99 Aligned_cols=259 Identities=21% Similarity=0.235 Sum_probs=203.5
Q ss_pred HHhCCCCccceeeccccceEEEEEe-cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEE-ecCCeeEEE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSC-SSDDFKALV 824 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV 824 (1027)
...++|+..+.||+|+||.||+|++ .+++.||||++..... .+.+.+|+++++.++|++++..++++ ...+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3457899999999999999999996 4789999998764432 24577899999999988877766655 667788999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccc
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~ 901 (1027)
|||+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp EECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 9999 88999999876667999999999999999999999 9999999999999999 789999999999998765
Q ss_pred cCCCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccc--hhHHHHHHHHHhhhH
Q 048205 902 KEDQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGE--MTLKRWVNDLLLISI 974 (1027)
Q Consensus 902 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~ 974 (1027)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 236 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS--- 236 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH---
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc---
Confidence 43221 12234578999999999999999999999999999999999999998643221 111111110000
Q ss_pred HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 975 MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 975 ~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.........++.++.+++.+||+.||++||+++++++.|+
T Consensus 237 ------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 237 ------------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp ------------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ------------chhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 0001112345678999999999999999999999999886
No 168
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.1e-38 Score=350.36 Aligned_cols=257 Identities=24% Similarity=0.355 Sum_probs=197.7
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecc---cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ---YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
...+|++.+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3457999999999999999999864 7899999999753 23445678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhc---CCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 824 VLEYMPYGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
||||+++++|.+++.. ....+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999998864 3456899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.... .......|++.|+|||++.+..++.++||||||+++|||++|+.||....... ..+..... ..
T Consensus 187 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~--------~~ 253 (310)
T 2wqm_A 187 SSKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---YSLCKKIE--------QC 253 (310)
T ss_dssp --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH---HHHHHHHH--------TT
T ss_pred cCCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH---HHHHHHhh--------cc
Confidence 4322 22234568999999999999999999999999999999999999997542221 11111110 00
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... .....++.++.+++.+||..||++||++.++++.|+
T Consensus 254 ~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 254 DYPP------LPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp CSCC------CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCCC------CcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 0000 011345677999999999999999999999999886
No 169
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.1e-38 Score=351.48 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=207.6
Q ss_pred CCccceeeccccceEEEEEec-----CCceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecC--CeeEE
Q 048205 752 FSENNLIGRGGFGFVYKARIQ-----DGMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSD--DFKAL 823 (1027)
Q Consensus 752 f~~~~~lG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 823 (1027)
|+..+.||+|+||+||+|++. +++.||||++..... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999988643 688999999986533 3456789999999999999999999999874 67899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++.... +++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997654 899999999999999999999 999999999999999999999999999999876543
Q ss_pred CCc-ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHH-HhhhHHHhhhcc
Q 048205 904 DQS-LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDL-LLISIMEVVDAN 981 (1027)
Q Consensus 904 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~ 981 (1027)
... .......+|+.|+|||++.+..++.++||||+|+++|||++|+.||............+.... ......+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 221 123344578889999999998999999999999999999999999875322111111110000 001122222222
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. ...+..++.++.+++.+||+.||++|||+.|+++.|+
T Consensus 268 ~~------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 268 ER------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp CC------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cC------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11 1223456778999999999999999999999999886
No 170
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=357.78 Aligned_cols=269 Identities=25% Similarity=0.334 Sum_probs=196.7
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHH--HHHHHhhccCCccceEEeEEec-----CCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDI--ECGMIKRIRHRNIIKFISSCSS-----DDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~--e~~~l~~l~h~niv~l~~~~~~-----~~~~ 821 (1027)
.++|++.+.||+|+||+||+|+. +++.||||++..... ..+.. |+..+..++||||+++++++.. ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46789999999999999999976 589999999975432 33333 4444556899999999985532 3367
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCC---------CeEeccCCCCcEEEcCCCcEEEe
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV---------PIIHCDLKPNNVLLDDNMVAHLS 892 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~Dlkp~NIll~~~~~~kl~ 892 (1027)
++||||+++|+|.+++.... .++..+..++.||++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 89999999999999997654 588999999999999999999 77 99999999999999999999999
Q ss_pred eecCCcccccCCC------cceecccccCccccCcccccC-------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccc
Q 048205 893 DFGMAKPFLKEDQ------SLTQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGE 959 (1027)
Q Consensus 893 Dfgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~ 959 (1027)
|||+++.+..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999986643211 122334569999999999886 456788999999999999999987765432211
Q ss_pred hhHHHHHHHHHhh----hHHHhh-hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 960 MTLKRWVNDLLLI----SIMEVV-DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 960 ~~~~~~~~~~~~~----~~~~~~-d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.....+....... ...... .................++.++.+++.+||+.||++|||++|+++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 1111111100000 000111 111111111122222346778999999999999999999999999886
No 171
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=355.34 Aligned_cols=267 Identities=21% Similarity=0.263 Sum_probs=200.5
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccch-hHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR-AIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
++|+..+.||+|+||+||+|+.. +++.||||++...... ....+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57899999999999999999976 7899999998654322 122345699999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~ 155 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP--TK 155 (324)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC--cc
Confidence 985 999999887777999999999999999999999 999999999999999999999999999999854322 22
Q ss_pred eecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh---HHHhh-----
Q 048205 908 TQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS---IMEVV----- 978 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 978 (1027)
......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .............. .....
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-EQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHhchhhhcchhh
Confidence 2334568999999999876 56899999999999999999999999865322 11222111111000 00000
Q ss_pred -hccc-cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 979 -DANL-LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 979 -d~~~-~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.... .............++.++.+++.+|+++||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000 00011112233456778899999999999999999999976
No 172
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.9e-38 Score=350.13 Aligned_cols=257 Identities=24% Similarity=0.427 Sum_probs=197.1
Q ss_pred HHhCCCCccceeeccccceEEEEEec----CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCC-
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ----DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD- 819 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~- 819 (1027)
...++|...+.||+|+||.||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888999999999999999864 34589999987542 334567889999999999999999999997754
Q ss_pred ----eeEEEEEecCCCCHHHHHhc-----CCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 048205 820 ----FKALVLEYMPYGSLEKCLYS-----SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 890 (1027)
Q Consensus 820 ----~~~lV~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 890 (1027)
..++||||+++|+|.+++.. ....+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 35999999999999999843 2356899999999999999999999 99999999999999999999999
Q ss_pred EeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHH
Q 048205 891 LSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDL 969 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 969 (1027)
|+|||+++.+.............+++.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ....
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~---- 261 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--MYDY---- 261 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--HHHH----
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--HHHH----
Confidence 999999986644333233344567889999999999999999999999999999999 888987643221 1111
Q ss_pred HhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 970 LLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 970 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.... ....+..++.++.+++.+||..||++||++.++++.|+
T Consensus 262 -------~~~~~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 262 -------LLHGH-------RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp -------HHTTC-------CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHcCC-------CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 00110 01112356678999999999999999999999999886
No 173
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.9e-38 Score=355.22 Aligned_cols=245 Identities=26% Similarity=0.352 Sum_probs=201.6
Q ss_pred CCCCccceeeccccceEEEEEe-cCCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
+.|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4488899999999999999986 478999999997542 234467889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||+. |++.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~--- 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP--- 206 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS---
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC---
Confidence 9997 5888888766667899999999999999999999 89999999999999999999999999999986532
Q ss_pred cceecccccCccccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 906 SLTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.....||+.|+|||++. ...++.++||||+||++|||++|+.||....... ... .+.....
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-----~~~--------~~~~~~~ 270 (348)
T 1u5q_A 207 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-----ALY--------HIAQNES 270 (348)
T ss_dssp ---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-----HHH--------HHHHSCC
T ss_pred ---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHH--------HHHhcCC
Confidence 12357999999999884 5678999999999999999999999987642211 100 0000000
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .....++..+.+++.+||+.||++|||+.++++
T Consensus 271 ~~------~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 271 PA------LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp CC------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 00 011245667899999999999999999999975
No 174
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=352.62 Aligned_cols=254 Identities=27% Similarity=0.472 Sum_probs=201.6
Q ss_pred CCCCccceeeccccceEEEEEecC-----CceEEEEEEecccc-hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQD-----GMEVAVKVFDLQYG-RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
.+|+..+.||+|+||+||+|++.. +..||||+++.... .....+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 567778999999999999998653 23599999975432 345678899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999999999877677999999999999999999999 899999999999999999999999999999866432
Q ss_pred CC-cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 904 DQ-SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 904 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
.. ........+|+.|+|||++.+..++.++||||+||++|||++ |+.||......+ ... .+.+.
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--~~~-----------~~~~~- 266 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--VMK-----------AINDG- 266 (333)
T ss_dssp ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHH-----------HHHTT-
T ss_pred cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--HHH-----------HHHCC-
Confidence 21 112223346788999999998999999999999999999999 999997542211 111 01111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. ....+..++.++.+++.+||+.||++||++.++++.|+
T Consensus 267 ~------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 267 F------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp C------CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred C------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0 01112346678999999999999999999999999885
No 175
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=7.3e-37 Score=359.21 Aligned_cols=102 Identities=32% Similarity=0.440 Sum_probs=52.9
Q ss_pred CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeec
Q 048205 123 PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQL 202 (1027)
Q Consensus 123 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 202 (1027)
+++++|+++++.+.. +| .+..+++|++|+|++|.+++..+ +.++++|++|++++|++++..+ ++.+++|++|++
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 455555666555553 22 25555555555555555553322 5555555555555555554332 555555555555
Q ss_pred cccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 203 QNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 203 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
++|.+++. +. +.++++|++|++++|.++
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~ 147 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTIS 147 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEEC
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccC
Confidence 55555533 21 455555555555555543
No 176
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-38 Score=371.95 Aligned_cols=253 Identities=25% Similarity=0.411 Sum_probs=203.6
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||+||+|++.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 356788899999999999999998888899999875432 34678999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 829 PYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 829 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
++|+|.+++.... ..+++.++..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 9999999997532 45899999999999999999999 9999999999999999999999999999998654321 12
Q ss_pred eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 908 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
......+++.|+|||++....++.++|||||||++|||++ |+.||......+ ... .+....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~------------~i~~~~---- 398 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLD------------QVERGY---- 398 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHH------------HHHTTC----
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHH------------HHHcCC----
Confidence 2233456789999999998999999999999999999999 999987642211 111 111110
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
+...+..++..+.+++.+||+.||++|||++++++.|++
T Consensus 399 --~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 399 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp --CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 112234577889999999999999999999999998863
No 177
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=355.77 Aligned_cols=243 Identities=26% Similarity=0.331 Sum_probs=203.6
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--------hhHHHHHHHHHHHhhccCCccceEEeEEecC
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--------RAIKSFDIECGMIKRIRHRNIIKFISSCSSD 818 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 818 (1027)
..++|+..+.||+|+||+||+|++. +++.||||++..... ...+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3467999999999999999999865 789999999975421 1334567899999999999999999999999
Q ss_pred CeeEEEEEecCCC-CHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCC
Q 048205 819 DFKALVLEYMPYG-SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 897 (1027)
Q Consensus 819 ~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla 897 (1027)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999887654 4899999999999999999999 999999999999999999999999999999
Q ss_pred cccccCCCcceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHH
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIME 976 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1027)
+...... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.....
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------------- 235 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE------------------- 235 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------------
T ss_pred eECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------------
Confidence 8654322 2234579999999999988776 8899999999999999999999975211
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
...... ..+..++.++.+++.+||.+||++|||+.|+++.
T Consensus 236 ~~~~~~--------~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 TVEAAI--------HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp GTTTCC--------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HHhhcc--------CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011111 1112356678999999999999999999999874
No 178
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.5e-38 Score=356.69 Aligned_cols=248 Identities=17% Similarity=0.186 Sum_probs=201.4
Q ss_pred HhCCCCccceeeccccceEEEEE------ecCCceEEEEEEecccchhHHHHHHHHHHHhhcc---CCccceEEeEEecC
Q 048205 748 ATNGFSENNLIGRGGFGFVYKAR------IQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR---HRNIIKFISSCSSD 818 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~ 818 (1027)
..++|++.+.||+|+||+||+|+ ..+++.||||+++... ...+..|+++++.++ |+||+++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678999999999999999994 3468999999987543 345667777777776 99999999999999
Q ss_pred CeeEEEEEecCCCCHHHHHhc----CCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---------
Q 048205 819 DFKALVLEYMPYGSLEKCLYS----SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD--------- 885 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~--------- 885 (1027)
+..++||||+++|+|.+++.. ....+++..+..++.||++||+||| +.+|+||||||+||+++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 999999999999999999974 3456999999999999999999999 999999999999999998
Q ss_pred --CCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHH
Q 048205 886 --NMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLK 963 (1027)
Q Consensus 886 --~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~ 963 (1027)
++.+||+|||+|+.+............+||++|+|||++.+..++.++||||+||++|||+||+.||.....+...
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-- 294 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK-- 294 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE--
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee--
Confidence 8999999999998654334444556678999999999999999999999999999999999999998653222110
Q ss_pred HHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCC-CCHHHHHHHhh
Q 048205 964 RWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEER-INAKEIVTKLA 1026 (1027)
Q Consensus 964 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~R-ps~~evl~~L~ 1026 (1027)
.... .... .....+.+++.+|+..+|.+| |+++++.+.|+
T Consensus 295 --------------~~~~-----~~~~----~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 295 --------------PEGL-----FRRL----PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp --------------ECSC-----CTTC----SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred --------------echh-----cccc----CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 0000 0000 124457789999999999998 57777776654
No 179
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=360.83 Aligned_cols=253 Identities=25% Similarity=0.437 Sum_probs=195.0
Q ss_pred CCCccceeeccccceEEEEEec--CC--ceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEec-CCeeEEE
Q 048205 751 GFSENNLIGRGGFGFVYKARIQ--DG--MEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSS-DDFKALV 824 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lV 824 (1027)
.|+..+.||+|+||+||+|++. ++ ..||||.++... ....+.+.+|++++++++||||+++++++.. .+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3666789999999999999864 22 368999886432 3456788999999999999999999998754 5678999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++|+|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999877777899999999999999999999 9999999999999999999999999999998654322
Q ss_pred Cc--ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 905 QS--LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 905 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
.. .......+|+.|+|||++.+..++.++|||||||++|||++ |.+||......+ ....+. ...
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~-----------~~~ 313 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLL-----------QGR 313 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHH-----------TTC
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHH-----------cCC
Confidence 11 12233457889999999999999999999999999999999 677776543222 111110 000
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 314 -------~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 314 -------RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11112356778999999999999999999999999886
No 180
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.8e-38 Score=345.38 Aligned_cols=253 Identities=24% Similarity=0.384 Sum_probs=204.1
Q ss_pred hCCCCccceeeccccceEEEEEecC----CceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQD----GMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
.++|...+.||+|+||.||+|++.. +..||+|++.... ....+.+.+|++++++++||||+++++++.+. ..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEE
Confidence 4578889999999999999998653 3469999987553 33457788999999999999999999998754 5689
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999877667899999999999999999999 999999999999999999999999999999865432
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. ........+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... ....+ ....
T Consensus 167 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~--~~~~~------------~~~~ 231 (281)
T 3cc6_A 167 D-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD--VIGVL------------EKGD 231 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG--HHHHH------------HHTC
T ss_pred c-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH--HHHHH------------hcCC
Confidence 2 122334457889999999998899999999999999999998 999997543221 11111 0000
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++..+.+++.+||..||++||++.|+++.|+
T Consensus 232 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 232 ------RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 01112345677899999999999999999999999886
No 181
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.1e-38 Score=361.94 Aligned_cols=249 Identities=20% Similarity=0.262 Sum_probs=192.7
Q ss_pred CCCCcc-ceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHH-hhccCCccceEEeEEec----CCeeE
Q 048205 750 NGFSEN-NLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMI-KRIRHRNIIKFISSCSS----DDFKA 822 (1027)
Q Consensus 750 ~~f~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~ 822 (1027)
++|... +.||+|+||+||+|++. +|+.||||+++.. ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456665 68999999999999876 6899999998632 4566788876 44589999999999865 56789
Q ss_pred EEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCCc
Q 048205 823 LVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 898 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla~ 898 (1027)
+||||++||+|.+++.... ..+++.++..++.||+.||+||| +.+|+||||||+||+++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998654 45899999999999999999999 899999999999999987 7899999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh--HHHHHHHHHhhhHHH
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT--LKRWVNDLLLISIME 976 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~ 976 (1027)
..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......... ....+.
T Consensus 213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~--------- 280 (400)
T 1nxk_A 213 ETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR--------- 280 (400)
T ss_dssp ECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH---------
T ss_pred ccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH---------
Confidence 65322 2234567899999999999999999999999999999999999999765322110 111100
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.... ... ...+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 281 --~~~~-~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 281 --MGQY-EFP---NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --HTCC-CCC---TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cCcc-cCC---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 000 01123467789999999999999999999999874
No 182
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-38 Score=346.19 Aligned_cols=254 Identities=23% Similarity=0.390 Sum_probs=203.7
Q ss_pred CCCccceeeccccceEEEEEecC----CceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCee-EEE
Q 048205 751 GFSENNLIGRGGFGFVYKARIQD----GMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK-ALV 824 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lV 824 (1027)
.|...+.||+|+||+||+|++.+ +..||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 35566899999999999998642 2369999987543 34457788999999999999999999999876554 999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+.+|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999887777899999999999999999999 9999999999999999999999999999998654322
Q ss_pred --CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 905 --QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 905 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.........+++.|+|||.+.+..++.++||||+|+++|||++|+.|+....... .....+. ...
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~------------~~~ 245 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF-DLTHFLA------------QGR 245 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG-GHHHHHH------------TTC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH-HHHHHhh------------cCC
Confidence 1122334567899999999999999999999999999999999666654432221 1111111 110
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++|||++++++.|+
T Consensus 246 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 246 ------RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 01112345677899999999999999999999999886
No 183
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3.8e-38 Score=357.53 Aligned_cols=273 Identities=24% Similarity=0.276 Sum_probs=209.1
Q ss_pred cccHHHHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-----CCccceEE
Q 048205 739 RFTYLELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-----HRNIIKFI 812 (1027)
Q Consensus 739 ~~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~ 812 (1027)
.+++.+.....++|++.+.||+|+||+||+|++. +++.||||++... ....+.+..|+++++.++ ||||++++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 4444455556788999999999999999999975 6899999998743 334466778999999987 99999999
Q ss_pred eEEecCCeeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC------
Q 048205 813 SSCSSDDFKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD------ 885 (1027)
Q Consensus 813 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~------ 885 (1027)
+++...+..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999 889999987654 45899999999999999999999 999999999999999975
Q ss_pred -------------------CCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHH
Q 048205 886 -------------------NMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETF 946 (1027)
Q Consensus 886 -------------------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ell 946 (1027)
++.+||+|||+|+.... ......||+.|+|||++.+..++.++||||+||++|||+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 253 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCC-----CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHH
Confidence 88999999999985432 123457899999999999999999999999999999999
Q ss_pred cCCCCCCCCcccchhHHHHHHHHHhh-h---HHHhhh--------ccc-c---Cccch-----------hhhHHhhhHHH
Q 048205 947 TRKKPTDESFTGEMTLKRWVNDLLLI-S---IMEVVD--------ANL-L---SHEDK-----------HFVAKEQCMSF 999 (1027)
Q Consensus 947 tg~~p~~~~~~~~~~~~~~~~~~~~~-~---~~~~~d--------~~~-~---~~~~~-----------~~~~~~~~~~~ 999 (1027)
+|+.||......+ .... +...... . ..+... ... . ..... ...........
T Consensus 254 ~g~~pf~~~~~~~-~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (360)
T 3llt_A 254 TGSLLFRTHEHME-HLAM-MESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHEL 331 (360)
T ss_dssp HSSCSCCCSSHHH-HHHH-HHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHH
T ss_pred HCCCCCCCCcHHH-HHHH-HHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHH
Confidence 9999997643221 1111 1111000 0 000000 000 0 00000 00011122366
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHH
Q 048205 1000 VFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 1000 l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+.+++.+||+.||++|||++|+++
T Consensus 332 l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 332 FCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHhcCChhhCCCHHHHhc
Confidence 889999999999999999999985
No 184
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.2e-37 Score=341.08 Aligned_cols=257 Identities=21% Similarity=0.234 Sum_probs=206.7
Q ss_pred hCCCCccceeeccccceEEEEEe-cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEE-ecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSC-SSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lV~e 826 (1027)
.++|+..+.||+|+||.||+|++ .+|+.||||++..... .+.+.+|+++++.++|++++..+.++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46799999999999999999996 4799999999875432 35688899999999998876666555 56778899999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccccC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~~~ 903 (1027)
|+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 88999999866667999999999999999999999 9999999999999999 48899999999999876543
Q ss_pred CCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccc--hhHHHHHHHHHhhhHHH
Q 048205 904 DQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGE--MTLKRWVNDLLLISIME 976 (1027)
Q Consensus 904 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 976 (1027)
... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----- 236 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS----- 236 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-----
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC-----
Confidence 221 11244579999999999999999999999999999999999999998643221 111111110000
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.........++.++.+++.+||+.||++||++.++++.|+
T Consensus 237 ----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 237 ----------TPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp ----------SCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ----------CchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 0001112346678999999999999999999999999886
No 185
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.9e-38 Score=344.08 Aligned_cols=249 Identities=24% Similarity=0.340 Sum_probs=198.3
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
++|++.+.||+|+||+||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46888999999999999999875 68999999987653 23457888999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcC---CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccc
Q 048205 828 MPYGSLEKCLYSS---NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 828 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~ 901 (1027)
+++|+|.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+++.+.
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988543 356899999999999999999999 9999999999999999 456889999999998654
Q ss_pred cCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
... ......||+.|+|||++. ..++.++||||+||++|||++|+.||........ .... ....+.
T Consensus 179 ~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~--~~~~---------~~~~~~ 243 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV--QQKA---------TYKEPN 243 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHH---------HHCCCC
T ss_pred Ccc---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHH--Hhhh---------ccCCcc
Confidence 322 234456899999999876 5689999999999999999999999976432111 1100 000010
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .....++.++.+++.+|++.||++|||+.|+++
T Consensus 244 ~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 244 YA-------VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CC-------C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cc-------cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 011224567889999999999999999999986
No 186
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.4e-38 Score=361.38 Aligned_cols=254 Identities=23% Similarity=0.266 Sum_probs=196.2
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--------hhHHHHHHHHHHHhhccCCccceEEeEEec
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--------RAIKSFDIECGMIKRIRHRNIIKFISSCSS 817 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 817 (1027)
...++|...+.||+|+||+||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34578999999999999999999865 689999999975421 122357889999999999999999999865
Q ss_pred CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEEEeee
Q 048205 818 DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM---VAHLSDF 894 (1027)
Q Consensus 818 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~kl~Df 894 (1027)
+..++||||+++|+|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DF 286 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDF 286 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCS
T ss_pred -CceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeec
Confidence 45799999999999999887654 5899999999999999999999 89999999999999997544 5999999
Q ss_pred cCCcccccCCCcceecccccCccccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 895 GMAKPFLKEDQSLTQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 895 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
|+|+..... ......+||+.|+|||++.. ..++.++||||+||++|||++|+.||........ ....+
T Consensus 287 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i----- 357 (419)
T 3i6u_A 287 GHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQI----- 357 (419)
T ss_dssp STTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHH-----
T ss_pred ccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHH-----
Confidence 999865422 22344679999999999863 5678899999999999999999999976433221 11111
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.... .......+..++.++.+++.+||+.||++||++.|+++.
T Consensus 358 -------~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 358 -------TSGK---YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp -------HTTC---CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -------hcCC---CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 0110 011112234567789999999999999999999999863
No 187
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.1e-38 Score=347.56 Aligned_cols=250 Identities=22% Similarity=0.305 Sum_probs=203.4
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.++|...+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456889999999999999999976 7899999999865544556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccccCC
Q 048205 828 MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999886544 4899999999999999999999 9999999999999999 78899999999999754221
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .... .+..... .
T Consensus 163 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-----~~~~--------~i~~~~~-~ 225 (304)
T 2jam_A 163 ---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-----KLFE--------KIKEGYY-E 225 (304)
T ss_dssp ---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHH--------HHHHCCC-C
T ss_pred ---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-----HHHH--------HHHcCCC-C
Confidence 223456899999999999999999999999999999999999999764221 1111 0111100 0
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ....+..++.++.+++.+|+..||++||++.|+++
T Consensus 226 ~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 F---ESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp C---CTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred C---CccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 01122346678999999999999999999999986
No 188
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=351.85 Aligned_cols=256 Identities=23% Similarity=0.290 Sum_probs=203.3
Q ss_pred CCCCccceeeccccceEEEEEe-cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEe----cCCeeEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARI-QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCS----SDDFKALV 824 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lV 824 (1027)
++|+..+.||+|+||.||+|+. .+++.||||++........+.+.+|++++++++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5688899999999999999997 478999999987666666778899999999999999999999986 33478999
Q ss_pred EEecCCCCHHHHHhc---CCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 825 LEYMPYGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
|||+++|+|.+++.. ....+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.++...
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 999999999998875 3456899999999999999999999 8999999999999999999999999999987543
Q ss_pred cCCCc-------ceecccccCccccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 902 KEDQS-------LTQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 902 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
..... .......||+.|+|||++.... ++.++||||+||++|||++|+.||.............
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~------ 259 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA------ 259 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH------
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH------
Confidence 21110 0112335799999999987553 6889999999999999999999986422111111110
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
..... .......++.++.+++.+||+.||++||++.|+++.|+
T Consensus 260 ------~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 260 ------VQNQL------SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp ------HHCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------hhccC------CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 00100 01112345677999999999999999999999999886
No 189
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.5e-37 Score=352.36 Aligned_cols=254 Identities=26% Similarity=0.364 Sum_probs=207.0
Q ss_pred HHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--------hhHHHHHHHHHHHhhc-cCCccceEEeEE
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--------RAIKSFDIECGMIKRI-RHRNIIKFISSC 815 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 815 (1027)
....++|++.+.||+|+||.||+|++. +|+.||||+++.... ...+.+.+|+++++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344567999999999999999999976 799999999975431 2245678899999999 799999999999
Q ss_pred ecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 048205 816 SSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFG 895 (1027)
Q Consensus 816 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 895 (1027)
...+..++||||+++++|.+++.... .+++..+..++.||+.||+||| +.||+||||||+||+++.++.+||+|||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecC
Confidence 99999999999999999999987543 4899999999999999999999 8999999999999999999999999999
Q ss_pred CCcccccCCCcceecccccCccccCcccccC------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHH
Q 048205 896 MAKPFLKEDQSLTQTQTLATIGYMAPEYGRE------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDL 969 (1027)
Q Consensus 896 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 969 (1027)
++..+.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... .....
T Consensus 246 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~---- 316 (365)
T 2y7j_A 246 FSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRM---- 316 (365)
T ss_dssp TCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH----
T ss_pred cccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHH----
Confidence 998664322 2344679999999998863 35889999999999999999999999764211 11110
Q ss_pred HhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 970 LLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 970 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+.... .......+..++..+.+++.+|+..||++||++.|+++
T Consensus 317 -------i~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 317 -------IMEGQ----YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp -------HHHTC----CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -------HHhCC----CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00110 01111223456677999999999999999999999987
No 190
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.2e-38 Score=346.95 Aligned_cols=255 Identities=21% Similarity=0.271 Sum_probs=199.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc---hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG---RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 477999999999999999999976 689999999875422 2346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999987653 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
........|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .... .+....
T Consensus 189 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~------------~~~~~~-- 251 (309)
T 2h34_A 189 -LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGA------------HINQAI-- 251 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHH------------HHHSCC--
T ss_pred -cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHH------------HhccCC--
Confidence 12233456899999999999999999999999999999999999999764211 0000 011110
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-CHHHHHHHhh
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-NAKEIVTKLA 1026 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-s~~evl~~L~ 1026 (1027)
......+..++.++.+++.+||..||++|| +++++++.|+
T Consensus 252 --~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 252 --PRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp --CCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred --CCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 001122345667789999999999999999 9999999876
No 191
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.8e-38 Score=368.34 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=207.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|...+.||+|+||.||+|+.+ +|+.||||++.+.. ....+.+..|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467899999999999999999976 69999999997542 22346788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCC---ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 825 LEYMPYGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.+|.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 45899999999999999999999 9999999999999999999999999999998654
Q ss_pred cCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ....+... +....
T Consensus 341 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~--------i~~~~ 409 (543)
T 3c4z_A 341 AGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQR--------VLEQA 409 (543)
T ss_dssp TTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHH--------HHHCC
T ss_pred CCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHH--------Hhhcc
Confidence 322 12334579999999999999999999999999999999999999998653221 11111111 11111
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA-----KEIVT 1023 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~-----~evl~ 1023 (1027)
. ..+..++.++.+++.+||..||++||++ .++++
T Consensus 410 ~--------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 V--------TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp C--------CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred c--------CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 1 1123456778999999999999999964 66653
No 192
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-37 Score=341.02 Aligned_cols=250 Identities=22% Similarity=0.319 Sum_probs=204.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc------hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG------RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46889999999999999999976 689999999875422 13577899999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC----cEEEeeecCCc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM----VAHLSDFGMAK 898 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~----~~kl~Dfgla~ 898 (1027)
+||||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++ .+||+|||.+.
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999987643 4899999999999999999999 99999999999999998877 89999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
...... ......+++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ .... +.
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~------------~~ 224 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTN------------IS 224 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH------------HH
T ss_pred eccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHH------------hH
Confidence 654322 2234568999999999998999999999999999999999999997642211 0111 00
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. ...........++..+.+++.+|+..||++||++.|+++
T Consensus 225 ~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 225 AV----NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp TT----CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hc----ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 00 001112223456778999999999999999999999986
No 193
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=9.9e-38 Score=354.41 Aligned_cols=277 Identities=21% Similarity=0.228 Sum_probs=208.1
Q ss_pred ccHHHHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccc-----------hhHHHHHHHHHHHhhccCCcc
Q 048205 740 FTYLELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG-----------RAIKSFDIECGMIKRIRHRNI 808 (1027)
Q Consensus 740 ~~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~e~~~l~~l~h~ni 808 (1027)
..+.++....++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 345677888999999999999999999999988899999999854321 123678899999999999999
Q ss_pred ceEEeEEec-----CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 809 IKFISSCSS-----DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 809 v~l~~~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
+++++++.. ....++||||++ |++.+++......+++..+..++.||+.||+||| +.+|+||||||+||++
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILL 167 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEE
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEE
Confidence 999999843 346899999998 5899988877777999999999999999999999 8999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhH
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTL 962 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~ 962 (1027)
+.++.+||+|||+++..... .......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||...... ...
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~ 243 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQL 243 (362)
T ss_dssp CTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHH
T ss_pred cCCCCEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHH
Confidence 99999999999999754322 22344578999999999876 67899999999999999999999999864321 112
Q ss_pred HHHHHHHHhhh-----------HHHhhhccccCc-cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 963 KRWVNDLLLIS-----------IMEVVDANLLSH-EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 963 ~~~~~~~~~~~-----------~~~~~d~~~~~~-~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
...+....... ..+......... ..........++..+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 244 NKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 22221111110 111111111111 111222334567789999999999999999999999863
No 194
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-38 Score=362.33 Aligned_cols=272 Identities=19% Similarity=0.265 Sum_probs=209.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCC--eeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD--FKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lV 824 (1027)
.++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 356889999999999999999976 58999999997543 234567789999999999999999999998755 77999
Q ss_pred EEecCCCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----cCCCcEEEeeecCCc
Q 048205 825 LEYMPYGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL----DDNMVAHLSDFGMAK 898 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~Dfgla~ 898 (1027)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999987643 23899999999999999999999 9999999999999999 778889999999998
Q ss_pred ccccCCCcceecccccCccccCcccccC--------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGRE--------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
...... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..................
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~ 241 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT 241 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred EccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence 654322 2234579999999998865 56788999999999999999999999754332222222111111
Q ss_pred hhhH---HHh---hhccc--cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 971 LISI---MEV---VDANL--LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 971 ~~~~---~~~---~d~~~--~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... ... ..... .............++..+.+++.+||.+||++||++.|+++.++
T Consensus 242 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 242 GKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp SCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 0000 000 00000 00001111223567788999999999999999999999998764
No 195
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.5e-38 Score=368.43 Aligned_cols=251 Identities=23% Similarity=0.314 Sum_probs=204.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356999999999999999999976 78999999997432 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc---CCCcEEEeeecCCccccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD---DNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~---~~~~~kl~Dfgla~~~~~ 902 (1027)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++.+..
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999886654 4899999999999999999999 99999999999999995 566899999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||......+ ... .+....
T Consensus 177 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~-----------~i~~~~- 238 (486)
T 3mwu_A 177 N---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--ILK-----------RVETGK- 238 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH-----------HHHHTC-
T ss_pred C---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHH-----------HHHhCC-
Confidence 2 22344579999999999875 58999999999999999999999997642211 111 001111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.....+.+..++.++.+++.+||.+||++|||+.|+++.
T Consensus 239 ---~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 239 ---YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp ---CCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred ---CCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111122334567789999999999999999999999873
No 196
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=354.96 Aligned_cols=263 Identities=24% Similarity=0.280 Sum_probs=198.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCC------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD------ 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 819 (1027)
.++|+..+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 467889999999999999999975 79999999986432 234567889999999999999999999997653
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..++||||+ +++|.+++... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 77999998763 4899999999999999999999 99999999999999999999999999999986
Q ss_pred cccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh--H--
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS--I-- 974 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~-- 974 (1027)
... .....++|++|+|||++.+ ..++.++||||+||++|||++|++||...... ..+........... .
T Consensus 178 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~ 251 (367)
T 1cm8_A 178 ADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQ 251 (367)
T ss_dssp CCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred ccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 432 2334578999999999887 67999999999999999999999999864321 11222211111100 0
Q ss_pred -------HHhhhccccCcc-chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 975 -------MEVVDANLLSHE-DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 975 -------~~~~d~~~~~~~-~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
..... ...... .........++.++.+++.+|+..||++|||+.|+++.
T Consensus 252 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 252 RLQSDEAKNYMK-GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp TCSCHHHHHHHH-HSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhhhHHHHHHHH-hCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 00000 000000 00111123457789999999999999999999999873
No 197
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.8e-38 Score=357.13 Aligned_cols=258 Identities=14% Similarity=0.153 Sum_probs=204.0
Q ss_pred CCCCccceeeccccceEEEEEecC---------CceEEEEEEecccchhHHHHHHHHHHHhhccCCccce----------
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQD---------GMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIK---------- 810 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~---------- 810 (1027)
++|++.+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578899999999999999998763 789999998743 46778999999999999987
Q ss_pred -----EEeEEec-CCeeEEEEEecCCCCHHHHHhcC-CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE
Q 048205 811 -----FISSCSS-DDFKALVLEYMPYGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL 883 (1027)
Q Consensus 811 -----l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll 883 (1027)
+++++.. ....++||||+ +++|.+++... ...+++.++..++.||+.||+||| +.+|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEE
Confidence 5677765 67889999999 89999999875 356899999999999999999999 9999999999999999
Q ss_pred cCCC--cEEEeeecCCcccccCCCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCc
Q 048205 884 DDNM--VAHLSDFGMAKPFLKEDQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESF 956 (1027)
Q Consensus 884 ~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~ 956 (1027)
+.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 9999999999866433221 11234479999999999999999999999999999999999999998654
Q ss_pred ccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 957 TGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
........+..... .. .. ...........++.++.+++.+||..||++||+++++++.|+
T Consensus 273 ~~~~~~~~~~~~~~--------~~-~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 273 PNTEDIMKQKQKFV--------DK-PG-PFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp TCHHHHHHHHHHHH--------HS-CC-CEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred cCHHHHHHHHHhcc--------CC-hh-hhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 33222222211110 00 00 000000111234677999999999999999999999999886
No 198
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.2e-38 Score=345.85 Aligned_cols=252 Identities=24% Similarity=0.409 Sum_probs=206.5
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|+..+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++.. +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 46788999999999999999998888899999987543 235678899999999999999999999874 4589999999
Q ss_pred CCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 829 PYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 829 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
++++|.+++.... ..+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.++...... ..
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YT 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EE
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-cc
Confidence 9999999987543 25899999999999999999999 9999999999999999999999999999998654322 12
Q ss_pred eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 908 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||......+ .... +....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-----~~~~---------~~~~~---- 227 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-----VIQN---------LERGY---- 227 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHH---------HHTTC----
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-----HHHH---------Hhccc----
Confidence 2233456788999999998889999999999999999999 899987642211 1110 00100
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+|++.||++|||+.++++.|+
T Consensus 228 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 228 --RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 01112346678999999999999999999999999886
No 199
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=352.09 Aligned_cols=266 Identities=24% Similarity=0.454 Sum_probs=211.3
Q ss_pred hCCCCccceeeccccceEEEEEe-----cCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC--ee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-----QDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD--FK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~ 821 (1027)
.++|++.+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35588899999999999999983 368899999998766666788999999999999999999999987654 78
Q ss_pred EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 822 ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
++||||+++++|.+++......+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887767999999999999999999999 9999999999999999999999999999998765
Q ss_pred cCCCcc-eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHH-----HHhhhHH
Q 048205 902 KEDQSL-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVND-----LLLISIM 975 (1027)
Q Consensus 902 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~ 975 (1027)
...... ......++..|+|||++.+..++.++||||+|+++|||++|+.|+...... ....... .......
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHH
T ss_pred ccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHH
Confidence 433221 122345778899999999888999999999999999999999987642110 1110000 0000111
Q ss_pred HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 976 EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 976 ~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.+.... ....+..++.++.+++.+||..||++||++.|+++.|+
T Consensus 274 ~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 274 ELLKNNG------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHTTC------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcCC------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 11123457788999999999999999999999999886
No 200
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-38 Score=354.18 Aligned_cols=271 Identities=25% Similarity=0.289 Sum_probs=202.7
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-----hhHHHHHHHHHHHhhccCCccceEEeEEecCCe
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-----RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 820 (1027)
...++|+..+.||+|+||.||+|++. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 44578999999999999999999976 689999999864322 123467889999999999999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 899988877767899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh-
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV- 978 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 978 (1027)
.... .......+|+.|+|||++.+. .++.++||||+||++|||++|.+||...... ..+................
T Consensus 163 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 163 GSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp TSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSS
T ss_pred cCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhh
Confidence 4322 223445789999999998754 5899999999999999999999998764322 1222221111100000000
Q ss_pred -----hccccC--ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 979 -----DANLLS--HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 979 -----d~~~~~--~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
+..... ...........++.++.+++.+|+..||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 000000 0000011123456789999999999999999999999863
No 201
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.4e-38 Score=350.16 Aligned_cols=269 Identities=24% Similarity=0.326 Sum_probs=203.7
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3467899999999999999999976 589999999865432 2345678899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||++++++.++..... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 103 ~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999988888765443 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh--hhHHHhhhcc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL--ISIMEVVDAN 981 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~ 981 (1027)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||......+ .....+..... ....+.+...
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHC
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhc
Confidence 223345789999999998875 68999999999999999999999997653221 22222111110 0000111000
Q ss_pred ------c---cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 982 ------L---LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 982 ------~---~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. .............++.++.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00011111222356788999999999999999999999875
No 202
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=4.4e-37 Score=346.28 Aligned_cols=271 Identities=24% Similarity=0.365 Sum_probs=210.8
Q ss_pred cHHHHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhh--ccCCccceEEeEEecC
Q 048205 741 TYLELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKR--IRHRNIIKFISSCSSD 818 (1027)
Q Consensus 741 ~~~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~ 818 (1027)
++.......++|++.+.||+|+||.||+|++ +|+.||||++... ..+.+.+|++++.. ++||||+++++++...
T Consensus 33 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 33 PLLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp CHHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred ceeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 3334445567899999999999999999987 4899999998643 34567778888887 7899999999999887
Q ss_pred C----eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeccCCCCcEEEcCCCcE
Q 048205 819 D----FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPNNVLLDDNMVA 889 (1027)
Q Consensus 819 ~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~ 889 (1027)
. ..++||||+++|+|.+++... .+++.++..++.|++.|++|||.. ++.+|+||||||+||+++.++.+
T Consensus 109 ~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 109 NGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCE
T ss_pred CCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCE
Confidence 6 789999999999999999764 489999999999999999999932 14689999999999999999999
Q ss_pred EEeeecCCcccccCCCcc--eecccccCccccCcccccCC------CCCcchhHHHHHHHHHHHHcC----------CCC
Q 048205 890 HLSDFGMAKPFLKEDQSL--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTR----------KKP 951 (1027)
Q Consensus 890 kl~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltg----------~~p 951 (1027)
||+|||+++......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998664433221 23445799999999998765 334789999999999999999 678
Q ss_pred CCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 952 TDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
|............+.... ............+ ....++..+.+++.+||+.||++||++.|+++.|+
T Consensus 267 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVV--------CEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp TTTTSCSSCCHHHHHHHH--------TTSCCCCCCCGGG-GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccccCcCcccHHHHHHHH--------HHHHhCCCCcccc-cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 766543333333332211 1111111111111 22356778999999999999999999999999986
No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-37 Score=367.34 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=204.0
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-------------hhHHHHHHHHHHHhhccCCccceEEe
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-------------RAIKSFDIECGMIKRIRHRNIIKFIS 813 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~niv~l~~ 813 (1027)
..++|++.+.||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567999999999999999999976 688999999875421 23467889999999999999999999
Q ss_pred EEecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC---cEE
Q 048205 814 SCSSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM---VAH 890 (1027)
Q Consensus 814 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~---~~k 890 (1027)
++.+....++||||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 9999999999999999999999887653 4899999999999999999999 99999999999999998776 699
Q ss_pred EeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 891 LSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
|+|||+++.+.... .....+||+.|+|||++. +.++.++||||+||++|+|++|++||...... .....
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~-- 258 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-----DIIKK-- 258 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHH--
Confidence 99999998664322 234457999999999987 46899999999999999999999999764321 11111
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+... ........+..++.++.+++.+|+.+||++|||++|+++
T Consensus 259 ------i~~~----~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 ------VEKG----KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp ------HHHC----CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ------HHcC----CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1111 111122334567788999999999999999999999985
No 204
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-37 Score=340.80 Aligned_cols=246 Identities=24% Similarity=0.321 Sum_probs=205.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 356889999999999999999876 67899999987542 22346788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++|+|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999987654 4899999999999999999999 999999999999999999999999999998754321
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||......+ ... .+.....
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~--------~~~~~~~-- 229 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-----THR--------RIVNVDL-- 229 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-----HHH--------HHHTTCC--
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-----HHH--------HHhcccc--
Confidence 2234568999999999999999999999999999999999999997642211 000 1111110
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+..++.++.+++.+|++.||++||++.|+++
T Consensus 230 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 ------KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ------CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 112345667899999999999999999999986
No 205
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1e-37 Score=343.46 Aligned_cols=248 Identities=20% Similarity=0.313 Sum_probs=206.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356888999999999999999976 58899999987542 23456788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.... .+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||.++......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999886543 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
. ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+ .+ . .+....
T Consensus 170 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~-~--------~~~~~~--- 231 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TY-L--------RIKKNE--- 231 (294)
T ss_dssp C--CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH-H--------HHHTTC---
T ss_pred c--ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HH-H--------HHhhcc---
Confidence 2 2334568999999999999899999999999999999999999997643211 01 0 000110
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++..+.+++.+|++.||++||++.|+++
T Consensus 232 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 232 -----YSIPKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----CCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 0112245567899999999999999999999876
No 206
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=377.54 Aligned_cols=246 Identities=22% Similarity=0.379 Sum_probs=200.0
Q ss_pred eeeccccceEEEEEec---CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEecCCCC
Q 048205 757 LIGRGGFGFVYKARIQ---DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYMPYGS 832 (1027)
Q Consensus 757 ~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~gs 832 (1027)
.||+|+||.||+|.++ ++..||||+++... ....+.+.+|++++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999864 46679999987543 3356789999999999999999999999976 56899999999999
Q ss_pred HHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc-eecc
Q 048205 833 LEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL-TQTQ 911 (1027)
Q Consensus 833 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~-~~~~ 911 (1027)
|.+++......+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.+....... ....
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999877777999999999999999999999 9999999999999999999999999999998764332211 1122
Q ss_pred cccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhh
Q 048205 912 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHF 990 (1027)
Q Consensus 912 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 990 (1027)
..+++.|+|||++....++.++|||||||++|||++ |+.||......+ .... +.... +.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~~~------------i~~~~------~~ 558 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE--VMAF------------IEQGK------RM 558 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH--HHHH------------HHTTC------CC
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHH------------HHcCC------CC
Confidence 345688999999999999999999999999999998 999997653221 1111 11111 11
Q ss_pred hHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 991 VAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 991 ~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
..+..++.++.+++.+||..||++||++.++++.|+
T Consensus 559 ~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 559 ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 223457788999999999999999999999999886
No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-37 Score=367.96 Aligned_cols=249 Identities=23% Similarity=0.311 Sum_probs=199.6
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||++++++|.+....++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45889999999999999999976 68999999997543 2335678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCCcccccC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla~~~~~~ 903 (1027)
|+++|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++. ++.+||+|||+++.+...
T Consensus 117 ~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 999999999886653 4899999999999999999999 999999999999999976 455999999999866432
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
. .....+||+.|+|||++. ..++.++||||+||++|+|++|++||......+ .... +.....
T Consensus 193 ~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-----~~~~--------i~~~~~- 254 (494)
T 3lij_A 193 K---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE-----ILRK--------VEKGKY- 254 (494)
T ss_dssp B---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHH--------HHHTCC-
T ss_pred c---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHH--------HHhCCC-
Confidence 2 234467999999999876 568999999999999999999999997643211 1110 001110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. .....+..++.++.+++.+||++||++|||+.|+++
T Consensus 255 ~---~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 255 T---FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp C---CCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C---CCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0 011122356778899999999999999999999985
No 208
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=344.94 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=203.4
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..++|++.+.||+|+||.||+|++. +|+.||||++.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4567999999999999999999876 58999999997543 34678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||.+..+....
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99999999998765666899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
.......|++.|+|||++.+..++.++||||+|+++|+|++|+.||........ . . . .... .
T Consensus 180 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~-~--------~-~~~~----~ 241 (314)
T 3com_A 180 AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA----I-F--------M-IPTN----P 241 (314)
T ss_dssp SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----H-H--------H-HHHS----C
T ss_pred cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH----H-H--------H-HhcC----C
Confidence 223345689999999999999999999999999999999999999976422110 0 0 0 0000 0
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..+..++..+.+++.+||..||++||++.++++
T Consensus 242 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 242 PPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp CCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0111223446678999999999999999999999975
No 209
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-38 Score=363.54 Aligned_cols=240 Identities=16% Similarity=0.149 Sum_probs=190.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecc---cchhHHHHHHHH---HHHhhccCCccceEE-------eE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ---YGRAIKSFDIEC---GMIKRIRHRNIIKFI-------SS 814 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 814 (1027)
.++|+..+.||+|+||+||+|++. +|+.||||++... .....+.+.+|+ +.+++++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 356888999999999999999964 6999999999743 334567888999 556666899999998 66
Q ss_pred EecCC-----------------eeEEEEEecCCCCHHHHHhcCCc------cCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 048205 815 CSSDD-----------------FKALVLEYMPYGSLEKCLYSSNY------ILDIFQRLNIMIDVASALEYLHFGYSVPI 871 (1027)
Q Consensus 815 ~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~LH~~~~~~i 871 (1027)
+.+.+ ..++||||+ +|+|.+++..... .+++..+..++.||++||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 66553 278999999 5799999876432 2335888899999999999999 9999
Q ss_pred EeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCC-----------CCCcchhHHHHHH
Q 048205 872 IHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREG-----------RVSTNGDVYSFGI 940 (1027)
Q Consensus 872 vH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwslGv 940 (1027)
+||||||+||+++.++.+||+|||+|+... ......+| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 999999999999999999999999998532 13344567 999999999887 8999999999999
Q ss_pred HHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 048205 941 MLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKE 1020 (1027)
Q Consensus 941 il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~e 1020 (1027)
++|||++|+.||........ ..... .....++.++.+++.+||..||++||++.|
T Consensus 302 il~elltg~~Pf~~~~~~~~-----------------~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e 356 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-----------------SEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQ 356 (377)
T ss_dssp HHHHHHHSSCCC------CC-----------------SGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHH
T ss_pred HHHHHHHCCCCCcccccccc-----------------hhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHH
Confidence 99999999999975422110 00000 011245677899999999999999999999
Q ss_pred HHH
Q 048205 1021 IVT 1023 (1027)
Q Consensus 1021 vl~ 1023 (1027)
+++
T Consensus 357 ~l~ 359 (377)
T 3byv_A 357 AME 359 (377)
T ss_dssp HHT
T ss_pred Hhh
Confidence 985
No 210
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.2e-38 Score=352.07 Aligned_cols=255 Identities=25% Similarity=0.407 Sum_probs=203.0
Q ss_pred hCCCCccceeeccccceEEEEEec------CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ------DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 821 (1027)
.++|++.+.||+|+||.||+|++. +++.||||++.... ......+.+|++++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 357889999999999999999842 57789999986442 34456788999999999999999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCC------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEe
Q 048205 822 ALVLEYMPYGSLEKCLYSSN------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLS 892 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~ 892 (1027)
++||||+++|+|.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998654 34889999999999999999999 999999999999999984 4469999
Q ss_pred eecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHh
Q 048205 893 DFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 893 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... ....++
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~----- 258 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFV----- 258 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHH-----
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHH-----
Confidence 9999986543333333344568899999999998899999999999999999998 99998764211 111111
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.... ....+..++..+.+++.+||..||++||++.|+++.|+
T Consensus 259 -------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 259 -------TSGG------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp -------HTTC------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------hcCC------CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0100 01112346677899999999999999999999999875
No 211
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4.2e-38 Score=347.99 Aligned_cols=253 Identities=24% Similarity=0.339 Sum_probs=202.7
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
..++|++.+.||+|+||.||+|++. +++.||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 3467899999999999999999976 589999999976655567788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999998876666999999999999999999999 899999999999999999999999999987643211 1
Q ss_pred ceecccccCccccCcccc-----cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcc
Q 048205 907 LTQTQTLATIGYMAPEYG-----REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDAN 981 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 981 (1027)
.......||+.|+|||++ ....++.++||||+|+++|||++|+.||....... .... +....
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~------------~~~~~ 238 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLK------------IAKSD 238 (302)
T ss_dssp HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHH------------HHHSC
T ss_pred cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHH------------HhccC
Confidence 122335689999999988 46678999999999999999999999997643211 0111 00000
Q ss_pred ccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 982 LLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 982 ~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
......+..++.++.+++.+||+.||++|||+.|+++
T Consensus 239 -----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 -----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0011123456677999999999999999999999975
No 212
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.1e-38 Score=345.19 Aligned_cols=253 Identities=23% Similarity=0.355 Sum_probs=203.1
Q ss_pred hCCCCccc-eeeccccceEEEEEec---CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 749 TNGFSENN-LIGRGGFGFVYKARIQ---DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 749 ~~~f~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
..+|++.+ .||+|+||+||+|++. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 45677777 9999999999999643 46889999987543 23357788999999999999999999999 556789
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999998754 4899999999999999999999 99999999999999999999999999999987644
Q ss_pred CCCcc-eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 903 EDQSL-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 903 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
..... ......+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... ..... +..
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~------------~~~ 235 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAM------------LEK 235 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHH------------HHT
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHH------------HHc
Confidence 33221 1222346788999999998889999999999999999999 99999764221 11111 111
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.. ....+..++.++.+++.+||+.||++||++.++++.|+
T Consensus 236 ~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 236 GE------RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp TC------CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CC------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 10 01112356778999999999999999999999999886
No 213
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.5e-38 Score=355.56 Aligned_cols=263 Identities=23% Similarity=0.342 Sum_probs=206.1
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|+..+.||+|+||+||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467999999999999999999976 78999999998653 3345678899999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
|+++++|.+++.... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999987654 4899999999999999999999 75 8999999999999999999999999999754321
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH---------------
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL--------------- 970 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~--------------- 970 (1027)
......||+.|+|||++.+..++.++||||+||++|||++|+.||.......... ......
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELEL--MFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHH--HHC------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH--HhcccccccCCCCCCCcccCC
Confidence 2234578999999999999999999999999999999999999997643222110 000000
Q ss_pred ------------hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 971 ------------LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 971 ------------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.....+..+........ ......++.++.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPP--KLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCC--CCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000111111000000 0011235677999999999999999999999986
No 214
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=4.2e-38 Score=352.08 Aligned_cols=269 Identities=23% Similarity=0.264 Sum_probs=197.7
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
...++|++.+.||+|+||+||+|+.. +++.||||+++.... ...+.+.+|++++++++||||+++++++...+..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 44567999999999999999999865 789999999865432 234567789999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-----CCCcEEEeeecCCc
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-----DNMVAHLSDFGMAK 898 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-----~~~~~kl~Dfgla~ 898 (1027)
||||+++ +|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++ .++.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999985 9999987654 4899999999999999999999 99999999999999994 55569999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh---H
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS---I 974 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 974 (1027)
.+.... .......+|+.|+|||++.+. .++.++||||+||++|||++|+.||...... .............. .
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 262 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTW 262 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhh
Confidence 654221 223445689999999998875 4899999999999999999999999764322 12222221111000 0
Q ss_pred HHhh---h--cccc--CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 975 MEVV---D--ANLL--SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 975 ~~~~---d--~~~~--~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.... + .... ............++.++.+++.+||++||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000 0 0000 0000111122336678899999999999999999999986
No 215
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=340.65 Aligned_cols=250 Identities=25% Similarity=0.381 Sum_probs=200.2
Q ss_pred CCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEecC
Q 048205 751 GFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYMP 829 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~ 829 (1027)
+|.....||+|+||.||+|++. +++.||||++........+.+.+|+++++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555679999999999999965 688999999987666667789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEEEeeecCCcccccCCCc
Q 048205 830 YGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD-NMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 830 ~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
+++|.+++.... ...++..+..++.|+++|++||| +.+|+||||||+||+++. ++.+||+|||.++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999987653 34678889999999999999999 899999999999999987 8999999999998654322
Q ss_pred ceecccccCccccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 907 LTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
.......|++.|+|||++.+.. ++.++||||+|+++|||++|+.||............ . ... . .
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~--------~~~-~-~-- 243 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK--V--------GMF-K-V-- 243 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHH--H--------HHH-C-C--
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHh--h--------ccc-c-c--
Confidence 1233456899999999987654 789999999999999999999999653221110000 0 000 0 0
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+..++.++.+++.+||+.||++||++.|+++
T Consensus 244 ----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 ----HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp ----CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ----cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00112346677899999999999999999999985
No 216
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=5.3e-39 Score=355.38 Aligned_cols=263 Identities=24% Similarity=0.384 Sum_probs=188.8
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhh--ccCCccceEEeEEecCC----eeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKR--IRHRNIIKFISSCSSDD----FKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~l 823 (1027)
++|++.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57999999999999999999875 899999998643 33556677888777 79999999999998776 7899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC-----CCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-----YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
||||+++|+|.+++... .+++..+..++.|++.|++|||.. ++.+|+||||||+||+++.++.+||+|||+++
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999764 377888999999999999999932 26799999999999999999999999999997
Q ss_pred ccccCCCcc--eecccccCccccCcccccCC------CCCcchhHHHHHHHHHHHHcC----------CCCCCCCcccch
Q 048205 899 PFLKEDQSL--TQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLMETFTR----------KKPTDESFTGEM 960 (1027)
Q Consensus 899 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwslGvil~elltg----------~~p~~~~~~~~~ 960 (1027)
......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.||........
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 654332221 12334799999999998876 445789999999999999999 556544322111
Q ss_pred hHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 961 TLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
....+.. .+.+..........+ ....++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 237 ~~~~~~~--------~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 294 (303)
T 3gxj_A 237 SVEEMRK--------VVCEQKLRPNIPNRW-QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp CCC-CHH--------HHTTSCCCCCCCGGG-GSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC
T ss_pred cHHHHHH--------HHHHhhcCCCccccc-cchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHH
Confidence 1111111 111122111111111 223567789999999999999999999999999874
No 217
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-37 Score=337.83 Aligned_cols=246 Identities=26% Similarity=0.363 Sum_probs=198.6
Q ss_pred CCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEec----CCeeEE
Q 048205 751 GFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSS----DDFKAL 823 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~l 823 (1027)
.|...+.||+|+||.||+|++. ++..||+|++.... ....+.+.+|++++++++||||+++++++.. ....++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3677789999999999999875 68899999987542 3345678899999999999999999998865 456899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEc-CCCcEEEeeecCCccc
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLD-DNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~-~~~~~kl~Dfgla~~~ 900 (1027)
||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+ |+||||||+||+++ .++.+||+|||++...
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999997643 4899999999999999999999 888 99999999999998 7899999999999754
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||............ . ..
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~----~---------~~ 244 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR----V---------TS 244 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH----H---------TT
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHH----H---------hc
Confidence 322 223456999999999876 45899999999999999999999999764322111111 0 00
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .....+..++.++.+++.+||+.||++|||++|+++
T Consensus 245 ~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 245 GV-----KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp TC-----CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cC-----CccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 011122344567899999999999999999999986
No 218
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.8e-38 Score=370.49 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=206.2
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46889999999999999999976 78999999997542 334577889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCccccc
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~~ 902 (1027)
||+.+|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|||+++.+..
T Consensus 106 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 9999999999887654 4899999999999999999999 9999999999999999 5678999999999986543
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. .....+||+.|+|||++.+ .++.++||||+||++|+|++|++||......+ .... +....
T Consensus 182 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~--~~~~-----------i~~~~- 243 (484)
T 3nyv_A 182 SK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD--ILKK-----------VEKGK- 243 (484)
T ss_dssp CC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-----------HHHCC-
T ss_pred cc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH--HHHH-----------HHcCC-
Confidence 22 2344579999999999875 68999999999999999999999997642211 1111 11111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.....+.+..++.++.+++.+||.+||++|||+.|+++
T Consensus 244 ---~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 244 ---YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp ---CCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---CCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 11112233456778999999999999999999999986
No 219
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.7e-38 Score=349.09 Aligned_cols=251 Identities=29% Similarity=0.451 Sum_probs=202.2
Q ss_pred CCCCccceeeccccceEEEEEec-CCceE--EEEEEeccc-chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEV--AVKVFDLQY-GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~v--avK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 824 (1027)
++|+..+.||+|+||.||+|++. +++.+ |+|++.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56888999999999999999865 56654 999887432 33456788999999999 899999999999999999999
Q ss_pred EEecCCCCHHHHHhcCC---------------ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcE
Q 048205 825 LEYMPYGSLEKCLYSSN---------------YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVA 889 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~ 889 (1027)
|||+++|+|.+++.... ..+++.+++.++.|+++||+||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997654 36899999999999999999999 9999999999999999999999
Q ss_pred EEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHH
Q 048205 890 HLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVND 968 (1027)
Q Consensus 890 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 968 (1027)
||+|||+++..... .......+++.|+|||++.+..++.++||||+||++|||++ |+.||...... ...
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~-- 251 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELY-- 251 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH--
T ss_pred EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-----HHH--
Confidence 99999998743211 12233456889999999998889999999999999999998 99999764221 111
Q ss_pred HHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 969 LLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 969 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+.+.... ....+..++.++.+++.+||..||++||++.|+++.|+
T Consensus 252 -------~~~~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 252 -------EKLPQGY------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp -------HHGGGTC------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHhhcCC------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0111110 01112346678999999999999999999999999875
No 220
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=2.1e-37 Score=342.46 Aligned_cols=249 Identities=26% Similarity=0.357 Sum_probs=206.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 356888999999999999999865 68999999997553 3446788999999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
|+++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 99999999998753 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
.......||+.|+|||++.+..++.++||||+|+++|||++|+.||....... ....+ ......
T Consensus 174 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~------------~~~~~~-- 237 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLI------------PKNNPP-- 237 (303)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHH------------HHSCCC--
T ss_pred cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHh------------hcCCCC--
Confidence 22344578999999999999999999999999999999999999987542211 11100 000000
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
..+..++..+.+++.+||+.||++||++.|+++.
T Consensus 238 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 ----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1112456678999999999999999999999863
No 221
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-37 Score=349.75 Aligned_cols=248 Identities=20% Similarity=0.312 Sum_probs=205.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..+|...+.||+|+||.||+|++. +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 356888999999999999999976 58899999987542 23456788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.... .+++.++..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999887643 4899999999999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLS 984 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 984 (1027)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .+ .. +....
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~-~~--------~~~~~--- 257 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE----TY-LR--------IKKNE--- 257 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HH-HH--------HHHTC---
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH----HH-HH--------HhcCC---
Confidence 2 2334578999999999999899999999999999999999999997642211 11 00 00000
Q ss_pred ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 985 HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 985 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+..++..+.+++.+||+.||++||++.|+++
T Consensus 258 -----~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 258 -----YSIPKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0112245567889999999999999999999875
No 222
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.5e-37 Score=353.47 Aligned_cols=266 Identities=23% Similarity=0.300 Sum_probs=200.8
Q ss_pred HHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEec-------
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSS------- 817 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 817 (1027)
....++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 345678999999999999999999864 799999999864422 22369999999999999999999844
Q ss_pred -------------------------------CCeeEEEEEecCCCCHHHHHhc---CCccCCHHHHHHHHHHHHHHHHHh
Q 048205 818 -------------------------------DDFKALVLEYMPYGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYL 863 (1027)
Q Consensus 818 -------------------------------~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~L 863 (1027)
....++||||+++ +|.+.+.. ....+++..+..++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3348899999985 88777653 345689999999999999999999
Q ss_pred hcCCCCCeEeccCCCCcEEEc-CCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHH
Q 048205 864 HFGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIM 941 (1027)
Q Consensus 864 H~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvi 941 (1027)
| +.+|+||||||+||+++ .++.+||+|||+|+.+.... ......+|+.|+|||++.+. .++.++||||+||+
T Consensus 158 H---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 158 H---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp H---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred H---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9 99999999999999998 68999999999998664332 23345689999999998765 48999999999999
Q ss_pred HHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh--hcccc-------CccchhhhHHhhhHHHHHHHHHHhcccCC
Q 048205 942 LMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV--DANLL-------SHEDKHFVAKEQCMSFVFNLAMKCTIESP 1012 (1027)
Q Consensus 942 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~~~-------~~~~~~~~~~~~~~~~l~~Li~~cl~~dP 1012 (1027)
+|||++|+.||..... ...+...+.........++. ++... ....-....+..++.++.+++.+||++||
T Consensus 232 l~ell~g~~pf~~~~~-~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (383)
T 3eb0_A 232 FGELILGKPLFSGETS-IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEP 310 (383)
T ss_dssp HHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred HHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCCh
Confidence 9999999999986432 22333333322211111111 11000 00111112234567789999999999999
Q ss_pred CCCCCHHHHHH
Q 048205 1013 EERINAKEIVT 1023 (1027)
Q Consensus 1013 ~~Rps~~evl~ 1023 (1027)
++|||+.|+++
T Consensus 311 ~~R~t~~e~l~ 321 (383)
T 3eb0_A 311 DLRINPYEAMA 321 (383)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhc
Confidence 99999999985
No 223
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.3e-37 Score=349.77 Aligned_cols=269 Identities=22% Similarity=0.303 Sum_probs=203.2
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEec--------C
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSS--------D 818 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 818 (1027)
.+|++.+.||+|+||+||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 56899999999999999999975 789999999864432 234567889999999999999999999977 3
Q ss_pred CeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 819 DFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
+..++||||+++ ++.+.+......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 468999999986 888888776667999999999999999999999 9999999999999999999999999999998
Q ss_pred ccccCC--CcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh--
Q 048205 899 PFLKED--QSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS-- 973 (1027)
Q Consensus 899 ~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 973 (1027)
.+.... .........||+.|+|||++.+ ..++.++||||+||++|||++|++||....... .............
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~ 251 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPE 251 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChh
Confidence 664322 1223345678999999998876 458999999999999999999999998643221 1111111110000
Q ss_pred -HH-----Hhhhcccc-Cccch---hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 974 -IM-----EVVDANLL-SHEDK---HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 974 -~~-----~~~d~~~~-~~~~~---~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. +..+.... ..... ........+.++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00 00000000 00000 00111123566899999999999999999999986
No 224
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.9e-38 Score=341.74 Aligned_cols=247 Identities=28% Similarity=0.413 Sum_probs=197.4
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecC-CeeEEEEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSD-DFKALVLEY 827 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lV~e~ 827 (1027)
.++|+..+.||+|+||.||+|++. |+.||||+++... ..+.+.+|++++++++||||+++++++.+. +..++||||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457889999999999999999875 8899999986443 456788999999999999999999997554 578999999
Q ss_pred cCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc
Q 048205 828 MPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS 906 (1027)
Q Consensus 828 ~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~ 906 (1027)
+++++|.+++.... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 99999999987653 23789999999999999999999 999999999999999999999999999999854322
Q ss_pred ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 907 LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 907 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||....... .... +....
T Consensus 171 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~------------~~~~~--- 231 (278)
T 1byg_A 171 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPR------------VEKGY--- 231 (278)
T ss_dssp -------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--HHHH------------HTTTC---
T ss_pred --ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHH------------HhcCC---
Confidence 123357889999999998899999999999999999998 999987643221 1110 11110
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 232 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 232 ---KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 11122356778999999999999999999999999886
No 225
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.6e-37 Score=355.57 Aligned_cols=259 Identities=19% Similarity=0.201 Sum_probs=207.6
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccC-CccceEEeEEecCCeeEEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRH-RNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lV~e 826 (1027)
.++|++.+.||+|+||.||+|++. +++.||||++..... ...+..|+++++.++| +++..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 467999999999999999999964 789999999875433 2457789999999987 456666677778888999999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE---cCCCcEEEeeecCCcccccC
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---DDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---~~~~~~kl~Dfgla~~~~~~ 903 (1027)
|+ +++|.+++......+++.+++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 88999999876667999999999999999999999 9999999999999999 68899999999999876543
Q ss_pred CCc-----ceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 904 DQS-----LTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 904 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~--~~~~~~i~~~~~~--- 234 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK--KQKYEKISEKKVA--- 234 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH--HHHHHHHHHHHHH---
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH--HHHHHHHhhcccc---
Confidence 321 122356799999999999999999999999999999999999999987533221 1111111000000
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
.........++.++.+++.+||..+|++||++.+|++.|+
T Consensus 235 --------~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 235 --------TSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp --------SCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred --------ccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0011122456778999999999999999999999999875
No 226
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=365.85 Aligned_cols=320 Identities=23% Similarity=0.221 Sum_probs=217.5
Q ss_pred cEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCC
Q 048205 261 EEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVST 340 (1027)
Q Consensus 261 ~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 340 (1027)
+.++.+++.++ .+|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|.++++.|..|.++++
T Consensus 14 ~~v~c~~~~l~----------~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 81 (477)
T 2id5_A 14 RAVLCHRKRFV----------AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFN 81 (477)
T ss_dssp TEEECCSCCCS----------SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CEEEeCCCCcC----------cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCcc
Confidence 45666666666 4454442 57889999999999888889999999999999999999888888999999
Q ss_pred cceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecC
Q 048205 341 LKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLG 420 (1027)
Q Consensus 341 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 420 (1027)
|++|+|++|++. .+|...+..+++|++|+|++|++++..|..|.++++|++|+|++|.++++.+..|.++++|++|+|+
T Consensus 82 L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 160 (477)
T 2id5_A 82 LRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLE 160 (477)
T ss_dssp CCEEECCSSCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEE
T ss_pred CCEEECCCCcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECC
Confidence 999999999885 6677667788899999999999988888888889999999999999988888888888888888888
Q ss_pred CCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCcc
Q 048205 421 DNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNK 500 (1027)
Q Consensus 421 ~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~ 500 (1027)
+|+++.++... +..+++|+.|++++|.+.+++ +..+..+++|+.|++++|.
T Consensus 161 ~n~l~~~~~~~----l~~l~~L~~L~l~~n~i~~~~-------------------------~~~~~~l~~L~~L~l~~~~ 211 (477)
T 2id5_A 161 KCNLTSIPTEA----LSHLHGLIVLRLRHLNINAIR-------------------------DYSFKRLYRLKVLEISHWP 211 (477)
T ss_dssp SCCCSSCCHHH----HTTCTTCCEEEEESCCCCEEC-------------------------TTCSCSCTTCCEEEEECCT
T ss_pred CCcCcccChhH----hcccCCCcEEeCCCCcCcEeC-------------------------hhhcccCcccceeeCCCCc
Confidence 88887665432 245566666666666655332 2344555666667776666
Q ss_pred ccCchhHhhhcccccceeeccCceeecccCCCCCccccccccC-ccccccCcccEEecCCCccccCccccccCcccccEE
Q 048205 501 LNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIP-STLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQI 579 (1027)
Q Consensus 501 l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 579 (1027)
+.+.+|..+....+|++|+|++|+++ .+| ..+.++++|+.|+|++|.+++..+..+..+.+|+.|
T Consensus 212 ~~~~~~~~~~~~~~L~~L~l~~n~l~--------------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (477)
T 2id5_A 212 YLDTMTPNCLYGLNLTSLSITHCNLT--------------AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEI 277 (477)
T ss_dssp TCCEECTTTTTTCCCSEEEEESSCCC--------------SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEE
T ss_pred cccccCcccccCccccEEECcCCccc--------------ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEE
Confidence 66665555555556666666666552 223 234445555555555555554444445555555555
Q ss_pred cccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccC
Q 048205 580 DLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFG 636 (1027)
Q Consensus 580 ~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~ 636 (1027)
+|++|++++..|..|+++++|++|+|++|++++..+..|..+++|+.|+|++|+++.
T Consensus 278 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 278 QLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp ECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred ECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 555555555445555555555555555555554333344455555555555555543
No 227
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.4e-38 Score=343.15 Aligned_cols=254 Identities=24% Similarity=0.375 Sum_probs=198.1
Q ss_pred CCCCccceeeccccceEEEEEec--CCc--eEEEEEEecc---cchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ--DGM--EVAVKVFDLQ---YGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 822 (1027)
++|+..+.||+|+||+||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++.... .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56888999999999999999864 333 6899988754 2345678889999999999999999999998765 78
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876666899999999999999999999 99999999999999999999999999999987644
Q ss_pred CCCcc-eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 903 EDQSL-TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 903 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
..... ......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... .... .+...
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~--------~~~~~ 240 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-----QILH--------KIDKE 240 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH--------HHHTS
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-----HHHH--------HHHcc
Confidence 33221 2233457889999999998889999999999999999999 99999764221 1111 01000
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
. .....+..++.++.+++.+||..||++||++.++++.|+
T Consensus 241 ~------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 241 G------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp C------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 0 011122356778999999999999999999999999886
No 228
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2e-37 Score=346.18 Aligned_cols=252 Identities=20% Similarity=0.281 Sum_probs=201.8
Q ss_pred hCCCCcc-ceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhcc-CCccceEEeEEecCCeeEE
Q 048205 749 TNGFSEN-NLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIR-HRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 823 (1027)
.++|.+. +.||+|+||.||+|+.. +|+.||||++.... ......+.+|+++++.++ ||||+++++++...+..++
T Consensus 27 ~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 4456666 88999999999999876 68999999987543 233567889999999995 6999999999999999999
Q ss_pred EEEecCCCCHHHHHhcC-CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCCcc
Q 048205 824 VLEYMPYGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAKP 899 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla~~ 899 (1027)
||||+++|+|.+++... ...+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~ 183 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRK 183 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEE
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccc
Confidence 99999999999988654 356899999999999999999999 999999999999999987 78999999999986
Q ss_pred cccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhh
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVD 979 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 979 (1027)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ... +..
T Consensus 184 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~------------i~~ 247 (327)
T 3lm5_A 184 IGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLN------------ISQ 247 (327)
T ss_dssp C------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH------------HHH
T ss_pred cCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHH------------HHh
Confidence 54322 22345799999999999999999999999999999999999999976432111 000 000
Q ss_pred ccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 980 ANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
... .........++..+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 248 VNV----DYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp TCC----CCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccc----ccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 000 0011122346677899999999999999999999975
No 229
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=4.7e-38 Score=374.04 Aligned_cols=253 Identities=25% Similarity=0.411 Sum_probs=207.9
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEec
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.++|++.+.||+|+||+||+|++.++..||||+++.... ..+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 356788899999999999999998888999999975432 34678999999999999999999999876 6789999999
Q ss_pred CCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcc
Q 048205 829 PYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSL 907 (1027)
Q Consensus 829 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~ 907 (1027)
++|+|.+++.... ..+++.++..++.||++||+||| +++|+||||||+||+++.++.+||+|||+++.+.... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 9999999997532 45899999999999999999999 9999999999999999999999999999998653211 11
Q ss_pred eecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCcc
Q 048205 908 TQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHE 986 (1027)
Q Consensus 908 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 986 (1027)
......++..|+|||++....++.++|||||||++|||++ |+.||......+ ... .+....
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~--~~~------------~i~~~~---- 481 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLD------------QVERGY---- 481 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH--HHH------------HHHTTC----
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH------------HHHcCC----
Confidence 1223446788999999998999999999999999999999 899987642211 111 111111
Q ss_pred chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 987 DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 987 ~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
+...+..++.++.++|.+||+.||++||++.++++.|+.
T Consensus 482 --~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 482 --RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 112234577889999999999999999999999999863
No 230
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.8e-37 Score=348.00 Aligned_cols=269 Identities=22% Similarity=0.222 Sum_probs=205.7
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecC-----Ce
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD-----DF 820 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 820 (1027)
...+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3467999999999999999999866 68899999997533 33457788999999999999999999999654 46
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||+++ +|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 8999999975 999988764 3899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCCCc-ceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH---
Q 048205 901 LKEDQS-LTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM--- 975 (1027)
Q Consensus 901 ~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--- 975 (1027)
...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+ ...............
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 257 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLN 257 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHH
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHH
Confidence 433221 11244579999999998654 458999999999999999999999997653222 222222211111000
Q ss_pred --------HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 976 --------EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 976 --------~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....................++.++.+++.+||.+||++|||+.|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000000000011111122345678999999999999999999999986
No 231
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.5e-38 Score=356.80 Aligned_cols=253 Identities=12% Similarity=0.107 Sum_probs=185.4
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc---hhHHHHHHHHHHHhhc--cCCccceEE-------eEEe
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG---RAIKSFDIECGMIKRI--RHRNIIKFI-------SSCS 816 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 816 (1027)
..|+..+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34888999999999999999976 789999999986532 3455677785555544 699988755 4443
Q ss_pred cC-----------------CeeEEEEEecCCCCHHHHHhcCCccCCHHHH------HHHHHHHHHHHHHhhcCCCCCeEe
Q 048205 817 SD-----------------DFKALVLEYMPYGSLEKCLYSSNYILDIFQR------LNIMIDVASALEYLHFGYSVPIIH 873 (1027)
Q Consensus 817 ~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~~~~ivH 873 (1027)
.. ...++||||++ |+|.+++...+..+++..+ ..++.||++||+||| +++|+|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 33 23799999999 7999999875544566666 788899999999999 999999
Q ss_pred ccCCCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCC
Q 048205 874 CDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTRKKP 951 (1027)
Q Consensus 874 ~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p 951 (1027)
|||||+||+++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999985431 1224457799999999987 6799999999999999999999999
Q ss_pred CCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 952 TDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
|......... .|. .............+.....++.++.+++.+||+.||++||++.|+++
T Consensus 293 f~~~~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKG--SWK----------RPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTT--CCC----------BCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCccccc--chh----------hhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9875332110 000 00000000111112222356788999999999999999999999975
No 232
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.6e-37 Score=341.09 Aligned_cols=250 Identities=23% Similarity=0.277 Sum_probs=188.6
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 467899999999999999999975 789999999875422 22334445556688899999999999999999999999
Q ss_pred EecCCCCHHHHHhc---CCccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCCcEEEeeecCCcccc
Q 048205 826 EYMPYGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFL 901 (1027)
Q Consensus 826 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~ 901 (1027)
||+++ +|.+++.. ....+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99985 88777654 4456899999999999999999999 87 99999999999999999999999999998654
Q ss_pred cCCCcceecccccCccccCcccc----cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 902 KEDQSLTQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 902 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
... ......||+.|+|||++ ....++.++||||+||++|||++|+.||............ .
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~------------~ 226 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ------------V 226 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH------------H
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHH------------H
Confidence 322 22334699999999996 5667899999999999999999999999754322211111 1
Q ss_pred hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 ~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
........ ....++.++.+++.+|++.||++|||+.|+++
T Consensus 227 ~~~~~~~~------~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 227 VEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp HHSCCCCC------CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred hccCCCCc------ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 11111111 11245677899999999999999999999976
No 233
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.3e-37 Score=376.58 Aligned_cols=249 Identities=21% Similarity=0.277 Sum_probs=206.5
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 822 (1027)
..++|++.+.||+|+||.||+|+.. +++.||||++++.. ....+.+..|.+++..+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4578999999999999999999976 68899999997542 23456677899999887 7999999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||||++||+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.+|.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998654 4899999999999999999999 99999999999999999999999999999985432
Q ss_pred CCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......+ .. ..+.....
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~-----~~--------~~i~~~~~ 559 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE-----LF--------QSIMEHNV 559 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HH--------HHHHSSCC
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHH-----HH--------HHHHhCCC
Confidence 22 23445689999999999999999999999999999999999999998642211 11 11111111
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCH-----HHHHH
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINA-----KEIVT 1023 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~-----~evl~ 1023 (1027)
..+..++.++.+|+.+||..||++||++ +||++
T Consensus 560 --------~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 --------AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp --------CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred --------CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1123466788999999999999999997 67654
No 234
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8.9e-38 Score=347.16 Aligned_cols=253 Identities=23% Similarity=0.351 Sum_probs=198.0
Q ss_pred HHhCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhcc--CCccceEEeEEecCCeeE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIR--HRNIIKFISSCSSDDFKA 822 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~ 822 (1027)
...++|++.+.||+|+||.||+|+..+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 4456799999999999999999998889999999997543 334577889999999997 499999999999999999
Q ss_pred EEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccccc
Q 048205 823 LVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLK 902 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~ 902 (1027)
+||| +.+++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++ ++.+||+|||+++.+..
T Consensus 105 lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEEeeccccccccC
Confidence 9999 55779999988654 5899999999999999999999 99999999999999996 48999999999987654
Q ss_pred CCCcceecccccCccccCcccccC-----------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 903 EDQSLTQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 903 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||..........
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~--------- 249 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL--------- 249 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH---------
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHH---------
Confidence 333333345578999999999875 468889999999999999999999997643221111
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....++.... ..+..++.++.+++.+||+.||++||++.|+++
T Consensus 250 ---~~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 ---HAIIDPNHEI------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ---HHHHCTTSCC------CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHhccccc------CCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1112221111 111233567899999999999999999999986
No 235
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.3e-37 Score=352.45 Aligned_cols=262 Identities=22% Similarity=0.253 Sum_probs=186.8
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecC------C
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD------D 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 819 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 467899999999999999999865 78999999986532 23456788999999999999999999998654 5
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 679999999 6799998865 34899999999999999999999 99999999999999999999999999999986
Q ss_pred cccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh-----
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS----- 973 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----- 973 (1027)
... ......||++|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+...........
T Consensus 182 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 182 TAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHT
T ss_pred ccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 432 2334579999999999887 67899999999999999999999999764321 12222222111100
Q ss_pred ------HHHhhhccccCccch-hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 974 ------IMEVVDANLLSHEDK-HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 974 ------~~~~~d~~~~~~~~~-~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+.. ....... .......++..+.+|+.+||..||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 256 KISSESARNYIQS-LTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp TCCCHHHHHHHHT-SCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhhHHHHHHHhc-cCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0001110 0000111 11112345677899999999999999999999986
No 236
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.7e-38 Score=342.62 Aligned_cols=252 Identities=22% Similarity=0.295 Sum_probs=203.1
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEe--cCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCS--SDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 823 (1027)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457889999999999999999976 68999999997543 334567889999999999999999999874 4678999
Q ss_pred EEEecCCCCHHHHHhcC---CccCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEeccCCCCcEEEcCCCcEEEeeec
Q 048205 824 VLEYMPYGSLEKCLYSS---NYILDIFQRLNIMIDVASALEYLHFGYSVP-----IIHCDLKPNNVLLDDNMVAHLSDFG 895 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlkp~NIll~~~~~~kl~Dfg 895 (1027)
||||+++++|.+++... ...+++..+..++.|++.|++||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 244899999999999999999999 777 9999999999999999999999999
Q ss_pred CCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH
Q 048205 896 MAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM 975 (1027)
Q Consensus 896 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1027)
.++...... .......|++.|+|||++.+..++.++||||+|+++|||++|+.||...... .....
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~---------- 227 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGK---------- 227 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHH----------
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHH----------
Confidence 998653221 1223456899999999999989999999999999999999999999764221 11110
Q ss_pred HhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHh
Q 048205 976 EVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKL 1025 (1027)
Q Consensus 976 ~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L 1025 (1027)
+...... ..+..++.++.+++.+||+.||++||++.|+++.+
T Consensus 228 -i~~~~~~-------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 228 -IREGKFR-------RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp -HHHTCCC-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred -Hhhcccc-------cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 0011100 11224667799999999999999999999999865
No 237
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=351.97 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=202.7
Q ss_pred CCCCccceeeccccceEEEEEe----cCCceEEEEEEeccc----chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCe
Q 048205 750 NGFSENNLIGRGGFGFVYKARI----QDGMEVAVKVFDLQY----GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDF 820 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 820 (1027)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5689999999999999999987 368999999986432 23345677799999999 69999999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||+++|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred EEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999999987654 4899999999999999999999 999999999999999999999999999999865
Q ss_pred ccCCCcceecccccCccccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
.... .......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ....+.... .
T Consensus 210 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~--------~ 279 (355)
T 1vzo_A 210 VADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRI--------L 279 (355)
T ss_dssp CGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHH--------H
T ss_pred ccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHH--------h
Confidence 4322 222334579999999999885 347899999999999999999999997543221 111211111 0
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCC-----CHHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERI-----NAKEIVTK 1024 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp-----s~~evl~~ 1024 (1027)
... ...+..++..+.+++.+||..||++|| ++.|+++.
T Consensus 280 ~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 280 KSE--------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp HCC--------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ccC--------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 000 011234566789999999999999999 99999864
No 238
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.9e-37 Score=336.40 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=197.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367899999999999999999976 79999999997542 23356788999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999987654 4899999999999999999999 8999999999999999999999999999998654321
Q ss_pred CcceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhcccc
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLL 983 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 983 (1027)
......+++.|+|||++.+..+ +.++||||+|+++|+|++|+.||...... ..... +.....
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~---------~~~~~~ 228 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP-----TLFKK---------IRGGVF 228 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH---------HHHCCC
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----HHHHH---------hhcCcc
Confidence 2234568999999999987765 68999999999999999999999764211 11110 001110
Q ss_pred CccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 984 SHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 984 ~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
..+..++..+.+++.+|++.||++||++.|+++.
T Consensus 229 -------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 229 -------YIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -------cCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1122356678999999999999999999999873
No 239
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=338.86 Aligned_cols=251 Identities=21% Similarity=0.313 Sum_probs=200.8
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc----chhHHHHHHHHHHHhhccCCccceEEeEE--ecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY----GRAIKSFDIECGMIKRIRHRNIIKFISSC--SSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~--~~~~~~ 821 (1027)
.++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++||||+++++++ .+....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999975 68999999997542 23456788999999999999999999998 445688
Q ss_pred EEEEEecCCCCHHHHHhcC-CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 822 ALVLEYMPYGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
++||||++++ +.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999886 77766543 356899999999999999999999 999999999999999999999999999999876
Q ss_pred ccCCCcceecccccCccccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
.............||+.|+|||++.+.. ++.++||||+|+++|||++|+.||..... .......
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~i--------- 225 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI-----YKLFENI--------- 225 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHH---------
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH-----HHHHHHH---------
Confidence 5433333444567999999999987643 47899999999999999999999976421 1111110
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.... ...+..++..+.+++.+||..||++||+++|+++.
T Consensus 226 ~~~~-------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 GKGS-------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp HHCC-------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred hcCC-------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 01123456778999999999999999999999863
No 240
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=5e-37 Score=349.17 Aligned_cols=265 Identities=21% Similarity=0.218 Sum_probs=194.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCC------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD------ 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 819 (1027)
.++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367889999999999999999865 68999999997542 334567889999999999999999999997654
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..++||||+++ +|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 78999999975 78887753 3789999999999999999999 99999999999999999999999999999986
Q ss_pred cccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh--------
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL-------- 971 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-------- 971 (1027)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .+...+.....
T Consensus 177 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 252 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKK 252 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTT
T ss_pred cccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHH
Confidence 5321 22344679999999999999999999999999999999999999997643211 11111110000
Q ss_pred --hhHHHhhhccccCc------------cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 972 --ISIMEVVDANLLSH------------EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 972 --~~~~~~~d~~~~~~------------~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.............. ...........+.++.+|+.+||..||++|||++|+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp SCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000000000 000111223457789999999999999999999999863
No 241
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.3e-37 Score=337.32 Aligned_cols=252 Identities=23% Similarity=0.331 Sum_probs=205.2
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---------chhHHHHHHHHHHHhhcc-CCccceEEeEEe
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---------GRAIKSFDIECGMIKRIR-HRNIIKFISSCS 816 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 816 (1027)
..++|+..+.||+|+||.||+|++. +|+.||||+++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3467999999999999999999976 68999999997543 123456788999999996 999999999999
Q ss_pred cCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecC
Q 048205 817 SDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGM 896 (1027)
Q Consensus 817 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgl 896 (1027)
..+..++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||.
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999998764 34899999999999999999999 99999999999999999999999999999
Q ss_pred CcccccCCCcceecccccCccccCccccc------CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 897 AKPFLKEDQSLTQTQTLATIGYMAPEYGR------EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 897 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
+..+.... ......+++.|+|||++. ...++.++||||+|+++|||++|+.||....... ...
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~------ 239 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--MLR------ 239 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHH------
T ss_pred hhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--HHH------
Confidence 98654322 223456899999999875 4568899999999999999999999997542111 110
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.+...... . .......++.++.+++.+||..||++||++.|+++
T Consensus 240 -----~~~~~~~~-~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 240 -----MIMSGNYQ-F---GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp -----HHHHTCCC-C---CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred -----HHhcCCcc-c---CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 01111110 0 11122356778999999999999999999999985
No 242
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.4e-38 Score=346.17 Aligned_cols=263 Identities=23% Similarity=0.298 Sum_probs=188.0
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
...++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 34578999999999999999999865 68999999886442 33456788899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhc-------CCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCC
Q 048205 825 LEYMPYGSLEKCLYS-------SNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMA 897 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla 897 (1027)
|||+++++|.+++.. ....+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999864 2345899999999999999999999 899999999999999999999999999998
Q ss_pred cccccCCC---cceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh
Q 048205 898 KPFLKEDQ---SLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS 973 (1027)
Q Consensus 898 ~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 973 (1027)
+....... ........||+.|+|||++.. ..++.++||||+||++|||++|+.||............ ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----~~~-- 242 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT----LQN-- 242 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH----HTS--
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH----hcc--
Confidence 76543221 112234568999999999876 56899999999999999999999999765332211100 000
Q ss_pred HHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 974 IMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 974 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
++...............++.++.+++.+||+.||++||++.|+++
T Consensus 243 -----~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 243 -----DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -----SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000000000011112345667899999999999999999999986
No 243
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=348.39 Aligned_cols=251 Identities=25% Similarity=0.322 Sum_probs=186.4
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCccceEEeEEe--------cC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRNIIKFISSCS--------SD 818 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~--------~~ 818 (1027)
..+|++.+.||+|+||.||+|++. +++.||||++........+.+.+|+.+++++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 346888999999999999999975 78999999987666666678899999999996 999999999984 34
Q ss_pred CeeEEEEEecCCCCHHHHHhc--CCccCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCcEEEcCCCcEEEeee
Q 048205 819 DFKALVLEYMPYGSLEKCLYS--SNYILDIFQRLNIMIDVASALEYLHFGYSVP--IIHCDLKPNNVLLDDNMVAHLSDF 894 (1027)
Q Consensus 819 ~~~~lV~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlkp~NIll~~~~~~kl~Df 894 (1027)
...++||||+. |+|.+++.. ....+++.++..++.||+.||+||| +.+ |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45899999996 699988864 3456899999999999999999999 888 999999999999999999999999
Q ss_pred cCCcccccCCCcc----------eecccccCccccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh
Q 048205 895 GMAKPFLKEDQSL----------TQTQTLATIGYMAPEYG---REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT 961 (1027)
Q Consensus 895 gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~ 961 (1027)
|+++......... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998664322111 11234689999999998 56678999999999999999999999996532110
Q ss_pred HHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 962 LKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 962 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
+....... .....++..+.+++.+||+.||++||++.|+++.|+
T Consensus 261 ---------------~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 261 ---------------IVNGKYSI------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp --------------------CCC------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ---------------hhcCcccC------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 01111100 111223344788999999999999999999999885
No 244
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.2e-37 Score=341.78 Aligned_cols=251 Identities=24% Similarity=0.286 Sum_probs=198.7
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc--------hhHHHHHHHHHHHhhccCCccceEEeEEecCC
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG--------RAIKSFDIECGMIKRIRHRNIIKFISSCSSDD 819 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 819 (1027)
.++|++.+.||+|+||.||+|+.. +++.||||++..... .....+.+|++++++++||||+++++++....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 456999999999999999999876 689999999864321 22345788999999999999999999997765
Q ss_pred eeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc---EEEeeecC
Q 048205 820 FKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV---AHLSDFGM 896 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfgl 896 (1027)
.++||||+++++|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 899999999999999887543 5899999999999999999999 999999999999999987664 99999999
Q ss_pred CcccccCCCcceecccccCccccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh
Q 048205 897 AKPFLKEDQSLTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS 973 (1027)
Q Consensus 897 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 973 (1027)
++..... .......||+.|+|||++. ...++.++||||+||++|+|++|+.||........ ....+.
T Consensus 164 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~------ 233 (322)
T 2ycf_A 164 SKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT------ 233 (322)
T ss_dssp CEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC-HHHHHH------
T ss_pred ceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH-HHHHHH------
Confidence 9865321 1223456899999999864 56788999999999999999999999976433221 111111
Q ss_pred HHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 974 IMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 974 ~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.... ......+..++.++.+++.+||..||++||++.|+++
T Consensus 234 -----~~~~----~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 -----SGKY----NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp -----HTCC----CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----hCcc----ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 0000 0011223456778999999999999999999999985
No 245
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=9.5e-37 Score=352.99 Aligned_cols=264 Identities=21% Similarity=0.250 Sum_probs=203.8
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhc------cCCccceEEeEEecCCee
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRI------RHRNIIKFISSCSSDDFK 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~~ 821 (1027)
..+|++.+.||+|+||+||+|+.. +++.||||++... ......+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457899999999999999999866 6899999999754 23345677788888877 467999999999999999
Q ss_pred EEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc--EEEeeecCCc
Q 048205 822 ALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV--AHLSDFGMAK 898 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~--~kl~Dfgla~ 898 (1027)
++||||+. ++|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 59999887654 45899999999999999999999 899999999999999999987 9999999997
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh--H--
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS--I-- 974 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~-- 974 (1027)
.... .....+||+.|+|||++.+..++.++||||+||++|||++|++||...... ..+..++....... .
T Consensus 251 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~-~~l~~i~~~~~~p~~~~~~ 324 (429)
T 3kvw_A 251 YEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG-DQLACMIELLGMPSQKLLD 324 (429)
T ss_dssp ETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHH
T ss_pred ecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHH
Confidence 5422 223457899999999999999999999999999999999999999865322 22333322221110 0
Q ss_pred -----HHhhhccccC----------------------------ccchh--hhHHhhhHHHHHHHHHHhcccCCCCCCCHH
Q 048205 975 -----MEVVDANLLS----------------------------HEDKH--FVAKEQCMSFVFNLAMKCTIESPEERINAK 1019 (1027)
Q Consensus 975 -----~~~~d~~~~~----------------------------~~~~~--~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~ 1019 (1027)
...++..... ..... ...+...+.++.+|+.+||++||++|||++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~ 404 (429)
T 3kvw_A 325 ASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPG 404 (429)
T ss_dssp TBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHH
Confidence 0111100000 00000 001112356789999999999999999999
Q ss_pred HHHH
Q 048205 1020 EIVT 1023 (1027)
Q Consensus 1020 evl~ 1023 (1027)
|+++
T Consensus 405 e~L~ 408 (429)
T 3kvw_A 405 QALR 408 (429)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9986
No 246
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.7e-37 Score=348.85 Aligned_cols=263 Identities=22% Similarity=0.281 Sum_probs=205.5
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEecccch-----------------hHHHHHHHHHHHhhccCCccceE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGR-----------------AIKSFDIECGMIKRIRHRNIIKF 811 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~e~~~l~~l~h~niv~l 811 (1027)
.++|++.+.||+|+||.||+|+. +|+.||||++...... ..+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999998 8999999999754221 11788999999999999999999
Q ss_pred EeEEecCCeeEEEEEecCCCCHHHH------HhcC-CccCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeccCCCCcEEE
Q 048205 812 ISSCSSDDFKALVLEYMPYGSLEKC------LYSS-NYILDIFQRLNIMIDVASALEYLHFGYS-VPIIHCDLKPNNVLL 883 (1027)
Q Consensus 812 ~~~~~~~~~~~lV~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~ivH~Dlkp~NIll 883 (1027)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.|++||| + .+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 5543 456899999999999999999999 8 999999999999999
Q ss_pred cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCC-CCCc-chhHHHHHHHHHHHHcCCCCCCCCcccchh
Q 048205 884 DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREG-RVST-NGDVYSFGIMLMETFTRKKPTDESFTGEMT 961 (1027)
Q Consensus 884 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwslGvil~elltg~~p~~~~~~~~~~ 961 (1027)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+||++|||++|+.||........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~- 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE- 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH-
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-
Confidence 99999999999999865332 33456799999999999877 5666 99999999999999999999986533211
Q ss_pred HHHHHHHHHhhhHHHhhhcc--ccC-ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 962 LKRWVNDLLLISIMEVVDAN--LLS-HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 962 ~~~~~~~~~~~~~~~~~d~~--~~~-~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....+. ........+.. ... ...........++.++.+++.+||+.||++||++.|+++
T Consensus 261 ~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 LFNNIR---TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHT---SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHh---ccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111110 00000000000 000 000001112456778999999999999999999999986
No 247
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.6e-37 Score=334.95 Aligned_cols=244 Identities=19% Similarity=0.286 Sum_probs=199.2
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 824 (1027)
.++|++.+.||+|+||+||+|++. +++.||||++.... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456899999999999999999976 79999999997542 33456778899999999 999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCC---ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC---------------
Q 048205 825 LEYMPYGSLEKCLYSSN---YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN--------------- 886 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~--------------- 886 (1027)
|||+++++|.+++.... ..+++..+..++.||++||+||| +.+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999987642 45899999999999999999999 9999999999999999844
Q ss_pred ----CcEEEeeecCCcccccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh
Q 048205 887 ----MVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT 961 (1027)
Q Consensus 887 ----~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~ 961 (1027)
..+||+|||.+...... ....||+.|+|||++.+. .++.++||||+||++|||++|.+|+.... .
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~ 236 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----Q 236 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----H
T ss_pred cCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----H
Confidence 47999999999865432 223589999999998866 56689999999999999999998764321 1
Q ss_pred HHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 962 LKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 962 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
... +...... ..+..++.++.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~------------~~~~~~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 237 WHE------------IRQGRLP-------RIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHH------------HHTTCCC-------CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHH------------HHcCCCC-------CCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 111 1111110 1123456778999999999999999999999863
No 248
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=3e-37 Score=347.24 Aligned_cols=251 Identities=24% Similarity=0.317 Sum_probs=199.4
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHH-HhhccCCccceEEeEEecCCeeEEE
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGM-IKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ......+..|..+ ++.++||||+++++++...+..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 4567888999999999999999964 78999999997543 2233445555555 7888999999999999999999999
Q ss_pred EEecCCCCHHHHHhc---CCccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 825 LEYMPYGSLEKCLYS---SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
|||+++ +|.+++.. ....+++..+..++.||++||+||| +. +|+||||||+||+++.++.+||+|||+++.+
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999986 99888764 4456899999999999999999999 76 9999999999999999999999999999865
Q ss_pred ccCCCcceecccccCccccCccccc----CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHH
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGR----EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIME 976 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1027)
.. ........||+.|+|||++. ...++.++||||+||++|||++|+.||.........+..
T Consensus 205 ~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~------------ 269 (340)
T 3an0_A 205 VD---SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ------------ 269 (340)
T ss_dssp SC---HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHH------------
T ss_pred cc---ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHH------------
Confidence 32 12223357999999999964 347899999999999999999999999764222111111
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
......... ....++.++.+++.+||..||++||++.|+++
T Consensus 270 ~~~~~~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 270 VVEEPSPQL------PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHSCCCCC------CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcCCCCCC------CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111000 11245677999999999999999999999976
No 249
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.8e-37 Score=373.32 Aligned_cols=246 Identities=24% Similarity=0.377 Sum_probs=197.9
Q ss_pred ceeeccccceEEEEEec---CCceEEEEEEecccc--hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEEecCC
Q 048205 756 NLIGRGGFGFVYKARIQ---DGMEVAVKVFDLQYG--RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLEYMPY 830 (1027)
Q Consensus 756 ~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e~~~~ 830 (1027)
+.||+|+||+||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999975432 335789999999999999999999999975 457899999999
Q ss_pred CCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCc-cee
Q 048205 831 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQS-LTQ 909 (1027)
Q Consensus 831 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~-~~~ 909 (1027)
|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...... ...
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 4899999999999999999999 999999999999999999999999999999876433221 222
Q ss_pred cccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccch
Q 048205 910 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDK 988 (1027)
Q Consensus 910 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 988 (1027)
....+|+.|+|||++....++.++|||||||++|||++ |+.||......+ .. +.+....
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~--~~------------~~i~~~~------ 589 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE--VT------------AMLEKGE------ 589 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HH------------HHHHTTC------
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HH------------HHHHcCC------
Confidence 33456789999999999999999999999999999998 999997643211 11 1111111
Q ss_pred hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 989 HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 989 ~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++.++.+++.+||+.||++||++.++++.|+
T Consensus 590 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 590 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 11223457788999999999999999999999999886
No 250
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.9e-37 Score=339.36 Aligned_cols=243 Identities=26% Similarity=0.438 Sum_probs=201.4
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEec----------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSS---------- 817 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---------- 817 (1027)
..+|+..+.||+|+||.||+|++. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 356889999999999999999976 79999999997543 346689999999999999999998854
Q ss_pred ------CCeeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEE
Q 048205 818 ------DDFKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAH 890 (1027)
Q Consensus 818 ------~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~k 890 (1027)
....++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 345799999999999999997542 46899999999999999999999 89999999999999999999999
Q ss_pred EeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 891 LSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
|+|||+++...... ......||+.|+|||++.+..++.++||||+|+++|||++|..|+... ..+..
T Consensus 163 l~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~--- 229 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFT--- 229 (284)
T ss_dssp ECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHH---
T ss_pred ECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHH---
Confidence 99999998664332 223456899999999999999999999999999999999999886421 11111
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
...+... +..++..+.+++.+||+.||++||++.|+++.|.
T Consensus 230 -----~~~~~~~----------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 230 -----DLRDGII----------SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp -----HHHTTCC----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -----Hhhcccc----------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111110 1234566889999999999999999999999875
No 251
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=6.6e-37 Score=337.80 Aligned_cols=267 Identities=25% Similarity=0.318 Sum_probs=203.6
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~e 826 (1027)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57899999999999999999976 78999999986443 2234678889999999999999999999999999999999
Q ss_pred ecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 827 YMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
|++ ++|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 998 59999887654 45889999999999999999999 9999999999999999999999999999998653322
Q ss_pred cceecccccCccccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh---HHHh----
Q 048205 906 SLTQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS---IMEV---- 977 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~---- 977 (1027)
.......+|+.|+|||++.+.. ++.++||||+||++|||++|+.||......+ ............. ....
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP 235 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHhhcCc
Confidence 1223456899999999988765 7999999999999999999999997643221 1122211111000 0000
Q ss_pred -hhccccCc-cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 -VDANLLSH-EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 -~d~~~~~~-~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+..... ..........++.++.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 236 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 00000000 00001112346678899999999999999999999986
No 252
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=340.12 Aligned_cols=268 Identities=21% Similarity=0.278 Sum_probs=198.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEe-----------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCS----------- 816 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----------- 816 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 467899999999999999999976 58999999998766666788899999999999999999999874
Q ss_pred ---cCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEEe
Q 048205 817 ---SDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-DNMVAHLS 892 (1027)
Q Consensus 817 ---~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 892 (1027)
+....++||||++ |+|.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999998 5999998653 4889999999999999999999 99999999999999997 56799999
Q ss_pred eecCCcccccCCC-cceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 893 DFGMAKPFLKEDQ-SLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 893 Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
|||+++....... ........+|+.|+|||.+.. ..++.++||||+||++|||++|+.||....... ..........
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~ 242 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIP 242 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSC
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 9999986543211 122234467899999998765 678999999999999999999999998653211 1111111100
Q ss_pred h---hhHHHh-------hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 971 L---ISIMEV-------VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 971 ~---~~~~~~-------~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ....+. ..................++.++.+++.+||+.||++||+++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0 000000 0000111111111223456788999999999999999999999986
No 253
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=8e-37 Score=347.47 Aligned_cols=263 Identities=20% Similarity=0.234 Sum_probs=200.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCee----
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFK---- 821 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 821 (1027)
.++|...+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 467889999999999999999866 68999999997543 23356788999999999999999999999877654
Q ss_pred --EEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 822 --ALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 822 --~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
++||||+. ++|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 588887743 3899999999999999999999 99999999999999999999999999999985
Q ss_pred cccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh--H--
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS--I-- 974 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~-- 974 (1027)
... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+........... .
T Consensus 194 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 267 (371)
T 4exu_A 194 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 267 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHT
T ss_pred ccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHH
Confidence 432 2334578999999999887 67899999999999999999999999764321 11222211111000 0
Q ss_pred -------HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 975 -------MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 975 -------~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.....................++.++.+++.+||+.||++|||++|+++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 268 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 00000000111111122233567889999999999999999999999863
No 254
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.3e-37 Score=353.14 Aligned_cols=262 Identities=24% Similarity=0.346 Sum_probs=197.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecC------CeeE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSD------DFKA 822 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 822 (1027)
.+|+..+.||+|+||+||+|++. +|+.||||++..... ...+|++++++++||||++++++|... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 35888899999999999999976 689999999864322 234699999999999999999988532 2367
Q ss_pred EEEEecCCCCHHHHHh---cCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-CcEEEeeecCCc
Q 048205 823 LVLEYMPYGSLEKCLY---SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN-MVAHLSDFGMAK 898 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-~~~kl~Dfgla~ 898 (1027)
+||||+++ ++.+.+. .....+++..+..++.||++||+||| +.+|+||||||+||+++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 89999986 6666554 33456899999999999999999999 9999999999999999965 678999999998
Q ss_pred ccccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
.+.... .....+||+.|+|||++.+. .++.++||||+||++|||++|++||.... ....+.+++..........+
T Consensus 206 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~-~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 206 QLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp ECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHHHCSCCHHHH
T ss_pred hcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHHhCCCCHHHH
Confidence 654322 22345789999999998764 78999999999999999999999998643 22333343333221111111
Q ss_pred --hhccccCc-----cchhh--hHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 --VDANLLSH-----EDKHF--VAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 --~d~~~~~~-----~~~~~--~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.++..... ....+ ..+...+.++.+|+.+||.+||++||++.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 11111000 00000 112345678999999999999999999999985
No 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.4e-37 Score=352.55 Aligned_cols=265 Identities=20% Similarity=0.191 Sum_probs=201.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc--------CCccceEEeEEe---
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR--------HRNIIKFISSCS--- 816 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~--- 816 (1027)
.++|++.+.||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 367999999999999999999865 6889999999743 334567888999999996 788999999987
Q ss_pred -cCCeeEEEEEecCCCCHHHHHhcC-CccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCC------
Q 048205 817 -SDDFKALVLEYMPYGSLEKCLYSS-NYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNM------ 887 (1027)
Q Consensus 817 -~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~------ 887 (1027)
.....++||||+. +++.+++... ...+++..+..++.||+.||+||| ++ +|+||||||+||+++.++
T Consensus 115 ~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhh
Confidence 5568899999995 5666665544 356899999999999999999999 87 999999999999999775
Q ss_pred -------------------------------------------cEEEeeecCCcccccCCCcceecccccCccccCcccc
Q 048205 888 -------------------------------------------VAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYG 924 (1027)
Q Consensus 888 -------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~ 924 (1027)
.+||+|||.++..... .....||+.|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHH
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhh
Confidence 7999999999865322 2345789999999999
Q ss_pred cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccch-----hHHHHHHHHHhhhHHHh---------hhccc--cCcc--
Q 048205 925 REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEM-----TLKRWVNDLLLISIMEV---------VDANL--LSHE-- 986 (1027)
Q Consensus 925 ~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~---------~d~~~--~~~~-- 986 (1027)
.+..++.++||||+||++|||++|+.||........ ................+ +.... ....
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 999999999999999999999999999976433221 11111111110000000 00000 0000
Q ss_pred ---------chhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 987 ---------DKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 987 ---------~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
......+...+.++.+|+.+||++||++|||++|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0011123456778999999999999999999999986
No 256
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=345.59 Aligned_cols=254 Identities=24% Similarity=0.318 Sum_probs=198.7
Q ss_pred HHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEec-----
Q 048205 745 LFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSS----- 817 (1027)
Q Consensus 745 ~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----- 817 (1027)
+....++|++.+.||+|+||.||+|++. +|+.||||++..... ..+.+.+|+++++++ +||||+++++++..
T Consensus 19 l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred ccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 3345678999999999999999999975 789999999975433 346788999999999 79999999999976
Q ss_pred -CCeeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 048205 818 -DDFKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFG 895 (1027)
Q Consensus 818 -~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 895 (1027)
.+..++||||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg 174 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 174 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCT
T ss_pred ccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCc
Confidence 467899999999999999997653 46899999999999999999999 9999999999999999999999999999
Q ss_pred CCcccccCCCcceecccccCccccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHH
Q 048205 896 MAKPFLKEDQSLTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLL 970 (1027)
Q Consensus 896 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 970 (1027)
++..+.... .......||+.|+|||++. +..++.++||||+||++|+|++|+.||........ ..
T Consensus 175 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~------ 244 (326)
T 2x7f_A 175 VSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA--LF------ 244 (326)
T ss_dssp TTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HH------
T ss_pred CceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH--HH------
Confidence 998653221 1233456899999999987 56789999999999999999999999975422111 00
Q ss_pred hhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 971 LISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 971 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.+....... .....++..+.+++.+||..||++||++.|+++
T Consensus 245 -----~~~~~~~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 245 -----LIPRNPAPR------LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -----HHHHSCCCC------CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -----HhhcCcccc------CCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 011235667899999999999999999999986
No 257
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9e-37 Score=349.51 Aligned_cols=264 Identities=24% Similarity=0.320 Sum_probs=197.2
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCC------eeEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDD------FKAL 823 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~~~l 823 (1027)
.+|+..+.||+|+||+||+|++.++..||+|++..... ...+|+++++.++||||+++++++...+ ..++
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 45888999999999999999988777799998764322 2236999999999999999999995533 3789
Q ss_pred EEEecCCCCHHHHH--hcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEEeeecCCccc
Q 048205 824 VLEYMPYGSLEKCL--YSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-DNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 824 V~e~~~~gsL~~~l--~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~Dfgla~~~ 900 (1027)
||||++++.+.... ......+++..+..++.||++||+||| +.+|+||||||+||+++ .++.+||+|||+|+.+
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 99999875433322 123456899999999999999999999 99999999999999999 7999999999999865
Q ss_pred ccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH--Hh
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM--EV 977 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 977 (1027)
.... ......+|+.|+|||++.+. .++.++||||+||++|||++|++||..... ...+...+......... ..
T Consensus 193 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 193 IAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESG-IDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCHHHHHH
T ss_pred cCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHh
Confidence 4332 22345789999999998765 589999999999999999999999986532 22233333322211111 11
Q ss_pred hhccccCc-----cc--hhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 978 VDANLLSH-----ED--KHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 978 ~d~~~~~~-----~~--~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
.++..... .. .....+..++.++.+++.+||.+||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 11111000 00 0111123466789999999999999999999999863
No 258
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-36 Score=353.29 Aligned_cols=319 Identities=23% Similarity=0.246 Sum_probs=204.9
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
-+.++++++.++ .+|..+. +.+++|+|++|+|++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 356777777777 6776654 5778888888888777777788888888888888888777777788888888888888
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
|+++ .++...|.++++|++|+|++|++.+..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..
T Consensus 90 n~l~-~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp SCCC-SCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CcCC-ccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 8876 456666677777777777777777777777778888888888888887777777888888888888888887665
Q ss_pred ChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEecc
Q 048205 188 PEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSK 267 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~ 267 (1027)
+..|..+++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+| ...+. ..+|++|++++
T Consensus 169 ~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--------------~~~~~-~~~L~~L~l~~ 233 (477)
T 2id5_A 169 TEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMT--------------PNCLY-GLNLTSLSITH 233 (477)
T ss_dssp HHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEEC--------------TTTTT-TCCCSEEEEES
T ss_pred hhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccC--------------ccccc-CccccEEECcC
Confidence 6667777888888888888776666677777777777777776653222 22221 12455555555
Q ss_pred ccccccCCCCCCCCCCC-ccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEc
Q 048205 268 NMFYGEIPSDLGNCTIP-KEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYL 346 (1027)
Q Consensus 268 N~l~~~~p~~~~~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 346 (1027)
|+++ .+| ..+..+++|+.|+|++|+++++.+..|..+++|+.|+|++|++.++.|..|.++++|++|+|
T Consensus 234 n~l~----------~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (477)
T 2id5_A 234 CNLT----------AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303 (477)
T ss_dssp SCCC----------SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEEC
T ss_pred Cccc----------ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEEC
Confidence 5554 222 23444455555555555555444444555555555555555554444444444444444444
Q ss_pred cCccccccCCCCccCCCCCccEEEcccccc
Q 048205 347 GSNSFFGRLPSSADVRLPNLEELSLSGNNF 376 (1027)
Q Consensus 347 ~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l 376 (1027)
++|++. .++...+..+++|++|+|++|.+
T Consensus 304 ~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l 332 (477)
T 2id5_A 304 SGNQLT-TLEESVFHSVGNLETLILDSNPL 332 (477)
T ss_dssp CSSCCS-CCCGGGBSCGGGCCEEECCSSCE
T ss_pred CCCcCc-eeCHhHcCCCcccCEEEccCCCc
Confidence 444442 23333333333444444444443
No 259
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.1e-36 Score=342.29 Aligned_cols=269 Identities=23% Similarity=0.253 Sum_probs=203.3
Q ss_pred HhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecC-----Ce
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSD-----DF 820 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 820 (1027)
..++|+..+.||+|+||.||+|++. +|+.||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 3467999999999999999999976 68999999996433 23456778999999999999999999988654 67
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||++ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 899999997 5999988764 4899999999999999999999 999999999999999999999999999999866
Q ss_pred ccCCCc--------ceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 901 LKEDQS--------LTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 901 ~~~~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
...... .......||+.|+|||++.. ..++.++||||+||++|||++|++||....... ...........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCC
Confidence 432211 11223568999999998764 678999999999999999999999998653211 11111111100
Q ss_pred h------------hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 972 I------------SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 972 ~------------~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
. ...+...................++.++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 242 PHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 000111000000011111222356788999999999999999999999986
No 260
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.5e-36 Score=335.68 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=195.0
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEec----------
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSS---------- 817 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---------- 817 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 456899999999999999999975 7899999998643 3445778899999999999999999998865
Q ss_pred ---CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeee
Q 048205 818 ---DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDF 894 (1027)
Q Consensus 818 ---~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 894 (1027)
....++||||+++|+|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 35679999999999999999877777889999999999999999999 999999999999999999999999999
Q ss_pred cCCcccccCCC------------cceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchh
Q 048205 895 GMAKPFLKEDQ------------SLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMT 961 (1027)
Q Consensus 895 gla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~ 961 (1027)
|+++....... ........||+.|+|||++.+. .++.++||||+||++|||++ ||.....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~---- 233 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGME---- 233 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchh----
Confidence 99986542210 1122345689999999998764 68999999999999999998 5443211
Q ss_pred HHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 048205 962 LKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTK 1024 (1027)
Q Consensus 962 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~ 1024 (1027)
....... +..... . ... .....++..+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~--------~~~~~~-~-~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 234 RVNILKK--------LRSVSI-E-FPP--DFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHH--------HHSTTC-C-CCT--TCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHHHh--------cccccc-c-cCc--cccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 1111110 000000 0 000 1123455678899999999999999999999873
No 261
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-37 Score=352.98 Aligned_cols=266 Identities=21% Similarity=0.272 Sum_probs=182.8
Q ss_pred CCc-cceeeccccceEEEEEec---CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEe--cCCeeEEEE
Q 048205 752 FSE-NNLIGRGGFGFVYKARIQ---DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCS--SDDFKALVL 825 (1027)
Q Consensus 752 f~~-~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lV~ 825 (1027)
|.+ .++||+|+||+||+|+++ +++.||||++.... ....+.+|++++++++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 554 568999999999999965 57899999986442 2356788999999999999999999994 467899999
Q ss_pred EecCCCCHHHHHhcC--------CccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----cCCCcEEEee
Q 048205 826 EYMPYGSLEKCLYSS--------NYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL----DDNMVAHLSD 893 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll----~~~~~~kl~D 893 (1027)
||+.+ +|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+||++ +.++.+||+|
T Consensus 100 e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 99975 888776532 124899999999999999999999 9999999999999999 6789999999
Q ss_pred ecCCcccccCCC-cceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccc--------hhHH
Q 048205 894 FGMAKPFLKEDQ-SLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGE--------MTLK 963 (1027)
Q Consensus 894 fgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~--------~~~~ 963 (1027)
||+|+.+..... .......+||+.|+|||++.+. .++.++||||+||++|||++|++||....... ..+.
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999986643221 1233456799999999998874 58999999999999999999999997643211 1112
Q ss_pred HHHHHHHhhh---HHHh------------hhccccCccc-hhh--hHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 964 RWVNDLLLIS---IMEV------------VDANLLSHED-KHF--VAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 964 ~~~~~~~~~~---~~~~------------~d~~~~~~~~-~~~--~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..+....... +.++ +......... ... ......+.++.+|+.+||++||++|||++|+++
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 2211111000 0000 0000000000 000 000011456889999999999999999999986
No 262
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.3e-36 Score=331.29 Aligned_cols=252 Identities=23% Similarity=0.304 Sum_probs=204.3
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
...++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34467999999999999999999976 78999999997543 2345778899999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC---CcEEEeeecCCccc
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN---MVAHLSDFGMAKPF 900 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~---~~~kl~Dfgla~~~ 900 (1027)
||||+++++|.+++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.+ +.+||+|||+++..
T Consensus 99 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 999999999999886544 4899999999999999999999 9999999999999999754 47999999999865
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
.... ......+++.|+|||++.+ .++.++||||+|+++|+|++|+.||...... ..... +...
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~--------~~~~ 237 (287)
T 2wei_A 175 QQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY-----DILKR--------VETG 237 (287)
T ss_dssp CCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH--------HHHC
T ss_pred cCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-----HHHHH--------HHcC
Confidence 4322 2233458899999998875 4899999999999999999999999764221 11110 0011
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.. .........++.++.+++.+|+..||++|||+.|+++
T Consensus 238 ~~----~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 238 KY----AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CC----CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CC----CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 0111222456778999999999999999999999987
No 263
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.5e-36 Score=336.75 Aligned_cols=264 Identities=20% Similarity=0.246 Sum_probs=203.8
Q ss_pred hCCCCccceeeccccceEEEEEe-c-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCc------cceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARI-Q-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN------IIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 820 (1027)
.++|++.+.||+|+||.||+|+. . +++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46799999999999999999986 3 6889999998743 334567888999999998765 9999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC--------------
Q 048205 821 KALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD-------------- 885 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-------------- 885 (1027)
.++||||+ +++|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 789999987654 45889999999999999999999 999999999999999987
Q ss_pred -----CCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccch
Q 048205 886 -----NMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEM 960 (1027)
Q Consensus 886 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~ 960 (1027)
++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 241 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDE-----HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE- 241 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTS-----CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-
T ss_pred cccccCCCceEeeCcccccCcc-----ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-
Confidence 67899999999985432 1234578999999999999999999999999999999999999997643221
Q ss_pred hHHHHHHHHHhhh--HHHhhhcc-c---------------------cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCC
Q 048205 961 TLKRWVNDLLLIS--IMEVVDAN-L---------------------LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERI 1016 (1027)
Q Consensus 961 ~~~~~~~~~~~~~--~~~~~d~~-~---------------------~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rp 1016 (1027)
............. ........ . .............++.++.+++.+||+.||++||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 1111111111000 00000000 0 0000000111234567899999999999999999
Q ss_pred CHHHHHH
Q 048205 1017 NAKEIVT 1023 (1027)
Q Consensus 1017 s~~evl~ 1023 (1027)
|+.|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 264
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=346.52 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=200.7
Q ss_pred HHhCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
...++|++.+.||+|+||.||+|++.+ .||+|+++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345779999999999999999998753 59999986542 22345677899999999999999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++......+++..+..++.|+++|++||| +.+|+||||||+||+++ ++.+||+|||+++......
T Consensus 108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~ 183 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ 183 (319)
T ss_dssp CBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred eecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence 9999999999999887767899999999999999999999 99999999999999998 6899999999987543211
Q ss_pred ---CcceecccccCccccCcccccC---------CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhh
Q 048205 905 ---QSLTQTQTLATIGYMAPEYGRE---------GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLI 972 (1027)
Q Consensus 905 ---~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 972 (1027)
.........|++.|+|||++.. ..++.++||||+||++|||++|+.||........ ....
T Consensus 184 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-----~~~~--- 255 (319)
T 2y4i_B 184 AGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI-----IWQM--- 255 (319)
T ss_dssp ----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHH-----HHHH---
T ss_pred ccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-----HHHh---
Confidence 1122233458999999999874 3578899999999999999999999976432111 0000
Q ss_pred hHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhhC
Q 048205 973 SIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLAG 1027 (1027)
Q Consensus 973 ~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~~ 1027 (1027)
.....+.. ....++.++.+++.+||..||++||++.+++++|++
T Consensus 256 --~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 256 --GTGMKPNL---------SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp --HTTCCCCC---------CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred --ccCCCCCC---------CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 00001100 011345568899999999999999999999999863
No 265
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.4e-36 Score=335.67 Aligned_cols=268 Identities=25% Similarity=0.329 Sum_probs=202.9
Q ss_pred HhCCCCccceeeccccceEEEEEe--cCCceEEEEEEecccch--hHHHHHHHHHHHhhc---cCCccceEEeEEe----
Q 048205 748 ATNGFSENNLIGRGGFGFVYKARI--QDGMEVAVKVFDLQYGR--AIKSFDIECGMIKRI---RHRNIIKFISSCS---- 816 (1027)
Q Consensus 748 ~~~~f~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 816 (1027)
..++|++.+.||+|+||.||+|++ .+|+.||||++...... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 36889999998754321 223556677777666 8999999999987
Q ss_pred -cCCeeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeee
Q 048205 817 -SDDFKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDF 894 (1027)
Q Consensus 817 -~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Df 894 (1027)
.....++||||++ |+|.+++.... ..+++..+..++.|+++||+||| +.||+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999998 59999987654 44899999999999999999999 999999999999999999999999999
Q ss_pred cCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhH
Q 048205 895 GMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISI 974 (1027)
Q Consensus 895 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 974 (1027)
|+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......+........
T Consensus 165 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 165 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGE 240 (326)
T ss_dssp CSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCG
T ss_pred cccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCc
Confidence 999865322 1233457899999999999999999999999999999999999999865321 111121111110000
Q ss_pred HHhhh----cc--ccC-ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 975 MEVVD----AN--LLS-HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 975 ~~~~d----~~--~~~-~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..... +. ... ...........++..+.+++.+||..||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000 00 000 000011122346778899999999999999999999985
No 266
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.7e-36 Score=367.95 Aligned_cols=253 Identities=23% Similarity=0.358 Sum_probs=203.8
Q ss_pred hCCCCccceeeccccceEEEEEecC----CceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQD----GMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 823 (1027)
.++|+..+.||+|+||.||+|++.. +..||||++.... ....+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-CceEE
Confidence 4568889999999999999998642 4579999886543 3345678899999999999999999999854 56899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccC
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~ 903 (1027)
||||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999877767899999999999999999999 899999999999999999999999999999866432
Q ss_pred CCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccc
Q 048205 904 DQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANL 982 (1027)
Q Consensus 904 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 982 (1027)
. ........+|+.|+|||++.+..++.++||||+||++|||++ |..||......+ ....+ ....
T Consensus 545 ~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~~~i-----------~~~~- 609 (656)
T 2j0j_A 545 T-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRI-----------ENGE- 609 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHH-----------HHTC-
T ss_pred c-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHH-----------HcCC-
Confidence 2 222233457789999999998899999999999999999997 999987643211 11111 0100
Q ss_pred cCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 983 LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 983 ~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
....+..++..+.+++.+||..||++||++.|+++.|+
T Consensus 610 ------~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 610 ------RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp ------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 01122356778999999999999999999999999886
No 267
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.4e-36 Score=338.34 Aligned_cols=274 Identities=21% Similarity=0.232 Sum_probs=193.9
Q ss_pred HHHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEecCCe-
Q 048205 743 LELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF- 820 (1027)
Q Consensus 743 ~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~- 820 (1027)
.+.....++|++.+.||+|+||+||+|++. +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345566789999999999999999999975 68999999986442 233456678888999999999999999965433
Q ss_pred ------eEEEEEecCCCCHHHHHh---cCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-CCcEE
Q 048205 821 ------KALVLEYMPYGSLEKCLY---SSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD-NMVAH 890 (1027)
Q Consensus 821 ------~~lV~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-~~~~k 890 (1027)
.++||||+++ ++.+.+. .....+++..+..++.|++.|++||| .++.+|+||||||+||+++. ++.+|
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~k 172 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLK 172 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEE
Confidence 7899999987 5554443 23456889999999999999999999 33789999999999999996 89999
Q ss_pred EeeecCCcccccCCCcceecccccCccccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHH
Q 048205 891 LSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDL 969 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 969 (1027)
|+|||+++.+.... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+..++...
T Consensus 173 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~~~~~~~~~~~ 248 (360)
T 3e3p_A 173 LCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS-AGQLHEIVRVL 248 (360)
T ss_dssp ECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHH
T ss_pred EeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh-HHHHHHHHHHc
Confidence 99999998664322 23345689999999998665 489999999999999999999999987432 22233332222
Q ss_pred Hhh--hHHHhhhccccCcc-----ch-----hhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 970 LLI--SIMEVVDANLLSHE-----DK-----HFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 970 ~~~--~~~~~~d~~~~~~~-----~~-----~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
... ......++...... .. .......++.++.+++.+||++||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 249 GCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111 11111111110000 00 00011225678999999999999999999999985
No 268
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=340.48 Aligned_cols=262 Identities=20% Similarity=0.233 Sum_probs=198.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEecCCe-----
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF----- 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 820 (1027)
.++|...+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 467888999999999999999875 68999999997543 2335678899999999999999999999987654
Q ss_pred -eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 821 -KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 821 -~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
.++||||++ ++|.+++.. .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 588887643 3899999999999999999999 99999999999999999999999999999985
Q ss_pred cccCCCcceecccccCccccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhh--H--
Q 048205 900 FLKEDQSLTQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLIS--I-- 974 (1027)
Q Consensus 900 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~-- 974 (1027)
... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||...... ..+........... .
T Consensus 176 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 249 (353)
T 3coi_A 176 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQ 249 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHT
T ss_pred CCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHH
Confidence 432 1234578999999999876 67899999999999999999999999764321 11111111111000 0
Q ss_pred -------HHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 975 -------MEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 975 -------~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
...+.................++.++.+++.+|+..||++||+++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 250 KLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000000011112356778999999999999999999999985
No 269
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.7e-35 Score=338.06 Aligned_cols=201 Identities=25% Similarity=0.342 Sum_probs=172.1
Q ss_pred HHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-CC-----ccceEEeEEecCC
Q 048205 747 QATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HR-----NIIKFISSCSSDD 819 (1027)
Q Consensus 747 ~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~~ 819 (1027)
...++|++.+.||+|+||+||+|+.. +++.||||+++.. ......+..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34578999999999999999999876 6889999999743 233566778888888885 44 4999999999999
Q ss_pred eeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc--CCCcEEEeeecC
Q 048205 820 FKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD--DNMVAHLSDFGM 896 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~--~~~~~kl~Dfgl 896 (1027)
..++||||+++ +|.+++.... ..+++..+..++.|++.||+|||. ++.+|+||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999999965 9999987654 458999999999999999999992 147899999999999995 578899999999
Q ss_pred CcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Q 048205 897 AKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDES 955 (1027)
Q Consensus 897 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~ 955 (1027)
++.... ......||+.|+|||++.+..++.++||||+||++|||++|++||...
T Consensus 208 a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 208 SCQLGQ-----RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CEETTC-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ceeccc-----ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 986532 123457899999999999999999999999999999999999999865
No 270
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6e-36 Score=347.07 Aligned_cols=250 Identities=23% Similarity=0.355 Sum_probs=187.2
Q ss_pred CCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEEecC
Q 048205 751 GFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLEYMP 829 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~~ 829 (1027)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 35556889999999998776678999999998753 235677899999886 89999999999999999999999996
Q ss_pred CCCHHHHHhcCCcc------CCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCC-------------CcEE
Q 048205 830 YGSLEKCLYSSNYI------LDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDN-------------MVAH 890 (1027)
Q Consensus 830 ~gsL~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~-------------~~~k 890 (1027)
|+|.+++...... .++..+..++.||+.||+||| +.+|+||||||+||+++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 5999999765421 123345779999999999999 9999999999999999754 4899
Q ss_pred EeeecCCcccccCCCcc--eecccccCccccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccch
Q 048205 891 LSDFGMAKPFLKEDQSL--TQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEM 960 (1027)
Q Consensus 891 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~ 960 (1027)
|+|||+++.+....... ......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||........
T Consensus 169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~ 248 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248 (434)
T ss_dssp ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH
T ss_pred EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH
Confidence 99999998765432211 1234579999999999875 568999999999999999999 9999975432211
Q ss_pred hHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 961 TLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.+.. ...+. ..........++.++.+++.+||+.||++||++.|+++
T Consensus 249 ---~i~~--------~~~~~-----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 ---NIIR--------GIFSL-----DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---HHHH--------TCCCC-----CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHhc--------CCCCc-----ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1100 00000 00011112346678999999999999999999999986
No 271
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.9e-36 Score=337.94 Aligned_cols=252 Identities=19% Similarity=0.223 Sum_probs=174.8
Q ss_pred HhCCCCccc-eeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhccCCccceEEeEEec----CCee
Q 048205 748 ATNGFSENN-LIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNIIKFISSCSS----DDFK 821 (1027)
Q Consensus 748 ~~~~f~~~~-~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 821 (1027)
..++|++.+ .||+|+||+||+|++. +|+.||||++.... ....+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788854 6999999999999976 68999999986432 112223334667799999999999876 4558
Q ss_pred EEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCC
Q 048205 822 ALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMA 897 (1027)
Q Consensus 822 ~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla 897 (1027)
++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 99999999999999998654 46899999999999999999999 999999999999999976 456999999999
Q ss_pred cccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHh
Q 048205 898 KPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEV 977 (1027)
Q Consensus 898 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 977 (1027)
+..... ......+|+.|+|||++....++.++||||+||++|+|++|+.||......... ..... .
T Consensus 179 ~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~---------~ 244 (336)
T 3fhr_A 179 KETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS-PGMKR---------R 244 (336)
T ss_dssp EEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------
T ss_pred eecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh-hhHHH---------h
Confidence 855322 223456899999999998889999999999999999999999999764322110 00000 0
Q ss_pred hhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 978 VDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 978 ~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+..... .........++.++.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 245 IRLGQY---GFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhcccc---ccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000000 0011112346778999999999999999999999987
No 272
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.2e-36 Score=335.14 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=179.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc-hhHHHHHHHHH-HHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-RAIKSFDIECG-MIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|+..+.||+|+||.||+|+.. +|+.||||++..... .....+..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 367888999999999999999975 789999999976532 23344555555 778889999999999999999999999
Q ss_pred EecCCCCHHHHHhc----CCccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 826 EYMPYGSLEKCLYS----SNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 826 e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
||+++ +|.+++.. ....+++..+..++.|+++|++||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 88777653 2456899999999999999999999 87 9999999999999999999999999999865
Q ss_pred ccCCCcceecccccCccccCcccc----cCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHH
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIME 976 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 976 (1027)
.... ......||+.|+|||++ .+..++.++||||+||++|||++|+.||......... ...
T Consensus 177 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~------------~~~ 241 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ------------LTQ 241 (327)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CC
T ss_pred cccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH------------HHH
Confidence 4321 22334689999999998 4567899999999999999999999999753211100 000
Q ss_pred hhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 977 VVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 977 ~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
+..... ..........++.++.+++.+||..||++||++.|+++
T Consensus 242 ~~~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 242 VVKGDP---PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCSCC---CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcCCC---CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 110000 00000111246677999999999999999999999975
No 273
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2e-35 Score=334.57 Aligned_cols=263 Identities=21% Similarity=0.254 Sum_probs=200.5
Q ss_pred hCCCCccceeeccccceEEEEEec-CC-ceEEEEEEecccchhHHHHHHHHHHHhhccCCc------cceEEeEEecCCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DG-MEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN------IIKFISSCSSDDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~~ 820 (1027)
.++|++.+.||+|+||+||+|+.. ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 467999999999999999999875 44 68999999743 334567888999999998776 8999999999999
Q ss_pred eEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEE----------------
Q 048205 821 KALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLL---------------- 883 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll---------------- 883 (1027)
.++||||+ ++++.+++.... ..+++.++..++.||++||+||| +.+|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 557777666543 56899999999999999999999 9999999999999999
Q ss_pred ---cCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccch
Q 048205 884 ---DDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEM 960 (1027)
Q Consensus 884 ---~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~ 960 (1027)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~- 246 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHE-----HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE- 246 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTS-----CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-
T ss_pred ccccCCCcEEEeecCccccccc-----cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 6788999999999985432 1234579999999999999999999999999999999999999998643221
Q ss_pred hHHHHHHHHHhhhHHHhhhcc----------c---------------cCccchhhhHHhhhHHHHHHHHHHhcccCCCCC
Q 048205 961 TLKRWVNDLLLISIMEVVDAN----------L---------------LSHEDKHFVAKEQCMSFVFNLAMKCTIESPEER 1015 (1027)
Q Consensus 961 ~~~~~~~~~~~~~~~~~~d~~----------~---------------~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~R 1015 (1027)
............. .++.... . ..............+.++.+++.+||+.||++|
T Consensus 247 ~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 247 HLVMMEKILGPIP-SHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHHHHCCCC-HHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHHHcCCCc-HHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 1111111111000 0000000 0 000000011112345678999999999999999
Q ss_pred CCHHHHHH
Q 048205 1016 INAKEIVT 1023 (1027)
Q Consensus 1016 ps~~evl~ 1023 (1027)
||+.|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999975
No 274
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=333.65 Aligned_cols=251 Identities=21% Similarity=0.265 Sum_probs=182.9
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccch--hHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR--AIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
.++|+..+.||+|+||.||+|++. +|+.||||++...... ..+.+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356888999999999999999976 7899999999755322 2233445556788889999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
||+ ++.+..+.......+++..+..++.|+++||+||| +. +|+||||||+||+++.++.+||+|||+++.+....
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 55666666554566899999999999999999999 75 99999999999999999999999999997653322
Q ss_pred CcceecccccCccccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhh
Q 048205 905 QSLTQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVD 979 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 979 (1027)
......+|+.|+|||++. ...++.++||||+||++|||++|+.||............ +..
T Consensus 180 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~------------~~~ 244 (318)
T 2dyl_A 180 ---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK------------VLQ 244 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH------------HHH
T ss_pred ---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHH------------Hhc
Confidence 223456899999999984 456889999999999999999999999764222111111 111
Q ss_pred ccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 980 ANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 980 ~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
... ........++.++.+++.+||..||++||++.|+++
T Consensus 245 ~~~-----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 245 EEP-----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCC-----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCC-----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 100 011111235677899999999999999999999975
No 275
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=9.9e-36 Score=360.33 Aligned_cols=335 Identities=21% Similarity=0.228 Sum_probs=240.6
Q ss_pred cCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEE
Q 048205 290 LAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEEL 369 (1027)
Q Consensus 290 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 369 (1027)
+.+++.|++++|.+..+++..|..+++|+.|+|++|.+.++.|..|.++++|++|+|++|.+.+ +|...+..+++|++|
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC-CCHHHHcCCCCCCEE
Confidence 4566667777777766666666677777777777777777666677777777777777777653 444444567777777
Q ss_pred EccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccC
Q 048205 370 SLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISN 449 (1027)
Q Consensus 370 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~ 449 (1027)
+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|.++.++. ..++.|+.|++++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-------~~l~~L~~L~l~~ 201 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL-------SLIPSLFHANVSY 201 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG-------GGCTTCSEEECCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh-------hhhhhhhhhhccc
Confidence 777777775555556777777777777777777777777777777777777777765532 3456677777777
Q ss_pred CCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeeccc
Q 048205 450 NPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSI 529 (1027)
Q Consensus 450 N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~ 529 (1027)
|.++++. ...+|+.|++++|.++...+.. .++|+.|+|++|++++
T Consensus 202 n~l~~l~------------------------------~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~-- 246 (597)
T 3oja_B 202 NLLSTLA------------------------------IPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD-- 246 (597)
T ss_dssp SCCSEEE------------------------------CCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--
T ss_pred Ccccccc------------------------------CCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--
Confidence 7665321 1224555555555555322211 2467777777777743
Q ss_pred CCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCc
Q 048205 530 PDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNR 609 (1027)
Q Consensus 530 p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~ 609 (1027)
+..++.+++|+.|+|++|.+++..|..++.+++|+.|+|++|++++ +|..++.+++|+.|+|++|.
T Consensus 247 -------------~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~ 312 (597)
T 3oja_B 247 -------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNH 312 (597)
T ss_dssp -------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSC
T ss_pred -------------ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCC
Confidence 2456677788888888888888788888888999999999999985 68888888999999999999
Q ss_pred cccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCcccccccCCccccCCC
Q 048205 610 LQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFKGNELLCGMP 686 (1027)
Q Consensus 610 l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~~ 686 (1027)
++ .+|..++.+++|+.|+|++|++++. | +..+++|+.|++++|++++..+. +.+..+...++.++...|+.+
T Consensus 313 l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 313 LL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp CC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred CC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 98 6888888899999999999998855 3 66788899999999998876432 356677777889999999965
No 276
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=347.84 Aligned_cols=249 Identities=22% Similarity=0.348 Sum_probs=188.7
Q ss_pred CCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEEEEec
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV~e~~ 828 (1027)
.+|+..+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+....++||||+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 45888899999999997765566799999999865432 2356799999999 7999999999999999999999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC-----CCcEEEeeecCCcccccC
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD-----NMVAHLSDFGMAKPFLKE 903 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~-----~~~~kl~Dfgla~~~~~~ 903 (1027)
+ |+|.+++........+.++..++.||++||+||| +.+|+||||||+||+++. ...+||+|||+|+.+...
T Consensus 101 ~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 101 A-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp S-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred C-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 7 5999999877655666677889999999999999 999999999999999953 336889999999866433
Q ss_pred CCc-ceecccccCccccCccccc---CCCCCcchhHHHHHHHHHHHHc-CCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 904 DQS-LTQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLMETFT-RKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 904 ~~~-~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwslGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
... .......||++|+|||++. ...++.++||||+||++|||++ |..||........ . ...
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~-----------~~~ 242 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---N-----------ILL 242 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---H-----------HHT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---H-----------HHh
Confidence 211 2334567999999999987 4567889999999999999999 8989854321110 0 000
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
..... .........+..+.+++.+||+.||++||++.|+++
T Consensus 243 ~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 243 GACSL----DCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCCCC----TTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCc----cccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00000 001111234556789999999999999999999985
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.1e-36 Score=340.75 Aligned_cols=265 Identities=17% Similarity=0.223 Sum_probs=199.3
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-----------CCccceEEeEEe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-----------HRNIIKFISSCS 816 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~ 816 (1027)
..+|++.+.||+|+||+||+|+.. +++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 357899999999999999999964 78999999997432 33466788999988886 899999999997
Q ss_pred cCC----eeEEEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCcEEEc------
Q 048205 817 SDD----FKALVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSV-PIIHCDLKPNNVLLD------ 884 (1027)
Q Consensus 817 ~~~----~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlkp~NIll~------ 884 (1027)
..+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| ++ +|+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCc
Confidence 654 789999999 889999987643 45899999999999999999999 87 999999999999995
Q ss_pred CCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCccc-----c
Q 048205 885 DNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTG-----E 959 (1027)
Q Consensus 885 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~-----~ 959 (1027)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4448999999999865322 23457899999999999999999999999999999999999999764321 1
Q ss_pred hhHHHHHHHHHhhhH---------HHhhhccc-cC------------ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC
Q 048205 960 MTLKRWVNDLLLISI---------MEVVDANL-LS------------HEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN 1017 (1027)
Q Consensus 960 ~~~~~~~~~~~~~~~---------~~~~d~~~-~~------------~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps 1017 (1027)
..+............ ...++... .. ........+..++.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 111111111110000 00000000 00 000011123467788999999999999999999
Q ss_pred HHHHHH
Q 048205 1018 AKEIVT 1023 (1027)
Q Consensus 1018 ~~evl~ 1023 (1027)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999986
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-36 Score=337.71 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=200.4
Q ss_pred HHHHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccch------hHHHHHHHHHHHhhcc--CCccceEEeE
Q 048205 744 ELFQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGR------AIKSFDIECGMIKRIR--HRNIIKFISS 814 (1027)
Q Consensus 744 ~~~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------~~~~~~~e~~~l~~l~--h~niv~l~~~ 814 (1027)
+.....++|++.+.||+|+||.||+|+.. +++.||||++...... ..+.+.+|++++++++ ||||++++++
T Consensus 37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp ---CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 33445678999999999999999999865 7899999999754321 2245667999999996 5999999999
Q ss_pred EecCCeeEEEEEecCC-CCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEEe
Q 048205 815 CSSDDFKALVLEYMPY-GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-DNMVAHLS 892 (1027)
Q Consensus 815 ~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 892 (1027)
+...+..++||||+.+ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999999976 89999987643 4899999999999999999999 99999999999999999 78999999
Q ss_pred eecCCcccccCCCcceecccccCccccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 893 DFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 893 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
|||+++..... ......||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... .
T Consensus 193 Dfg~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~------- 254 (320)
T 3a99_A 193 DFGSGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------E------- 254 (320)
T ss_dssp CCTTCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H-------
T ss_pred eCccccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------h-------
Confidence 99999865432 2234569999999999887665 688999999999999999999986521 0
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
....... .+..++.++.+++.+||..||++||++.|+++
T Consensus 255 -----~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 255 -----IIRGQVF--------FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp -----HHHCCCC--------CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -----hhccccc--------ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011110 11235667899999999999999999999986
No 279
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.4e-35 Score=338.25 Aligned_cols=335 Identities=21% Similarity=0.223 Sum_probs=219.5
Q ss_pred cCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEE
Q 048205 290 LAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEEL 369 (1027)
Q Consensus 290 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L 369 (1027)
+.+++.|++++|.++.+.+..|..+++|++|++++|.+.++.+..|.++++|++|++++|++.+ ++...+..+++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc-CCHHHhcCCCCCCEE
Confidence 4566666666666666555556666666666666666666666666666667777777666643 333444566677777
Q ss_pred EccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccC
Q 048205 370 SLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISN 449 (1027)
Q Consensus 370 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~ 449 (1027)
+|++|+++...+..|.++++|++|++++|++++..|..|+.+++|++|++++|+++.++ ...++.|+.|++++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~-------~~~l~~L~~L~l~~ 195 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD-------LSLIPSLFHANVSY 195 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC-------GGGCTTCSEEECCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc-------cccccccceeeccc
Confidence 77777776443444566777777777777777666666777777777777777766543 23456677777777
Q ss_pred CCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeeccc
Q 048205 450 NPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSI 529 (1027)
Q Consensus 450 N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~ 529 (1027)
|.++++. ...+|++|++++|+++.. |. ...++|+.|+|++|++++
T Consensus 196 n~l~~~~------------------------------~~~~L~~L~l~~n~l~~~-~~--~~~~~L~~L~l~~n~l~~-- 240 (390)
T 3o6n_A 196 NLLSTLA------------------------------IPIAVEELDASHNSINVV-RG--PVNVELTILKLQHNNLTD-- 240 (390)
T ss_dssp SCCSEEE------------------------------CCSSCSEEECCSSCCCEE-EC--CCCSSCCEEECCSSCCCC--
T ss_pred ccccccC------------------------------CCCcceEEECCCCeeeec-cc--cccccccEEECCCCCCcc--
Confidence 7665321 112344555555555432 21 113566666666666632
Q ss_pred CCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCc
Q 048205 530 PDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNR 609 (1027)
Q Consensus 530 p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~ 609 (1027)
+..+..+++|+.|++++|.+++..|..++.+++|+.|++++|++++ +|..++.+++|++|+|++|+
T Consensus 241 -------------~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~ 306 (390)
T 3o6n_A 241 -------------TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNH 306 (390)
T ss_dssp -------------CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSC
T ss_pred -------------cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCc
Confidence 1345566677777777777777667777788888888888888874 67777778888888888888
Q ss_pred cccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCcccccccCCccccCCC
Q 048205 610 LQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFKGNELLCGMP 686 (1027)
Q Consensus 610 l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~~ 686 (1027)
++ .+|..++.+++|+.|+|++|++++. | +..+++|+.|++++|++.+.-. ...+..+....+.++...|+.|
T Consensus 307 l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 307 LL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp CC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTT
T ss_pred ce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceeccc
Confidence 87 5777778888888888888888744 3 5677788888888888776422 1234555566677888888865
No 280
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-36 Score=333.77 Aligned_cols=243 Identities=24% Similarity=0.338 Sum_probs=191.9
Q ss_pred HHHhCCCCccceeeccccceEEEEEec-CCceEEEEEEecccc------hhHHHHHHHHHHHhhc----cCCccceEEeE
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG------RAIKSFDIECGMIKRI----RHRNIIKFISS 814 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~e~~~l~~l----~h~niv~l~~~ 814 (1027)
....++|++.+.||+|+||.||+|+.. +++.||||+++.... .....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 345678999999999999999999865 689999999865432 1223455689999998 89999999999
Q ss_pred EecCCeeEEEEEe-cCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc-CCCcEEEe
Q 048205 815 CSSDDFKALVLEY-MPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD-DNMVAHLS 892 (1027)
Q Consensus 815 ~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~-~~~~~kl~ 892 (1027)
+...+..++|||| +.+++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 78999999987644 4899999999999999999999 89999999999999999 89999999
Q ss_pred eecCCcccccCCCcceecccccCccccCcccccCCCCC-cchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHh
Q 048205 893 DFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVS-TNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLL 971 (1027)
Q Consensus 893 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 971 (1027)
|||+++..... ......|++.|+|||++.+..+. .++||||+||++|||++|+.||....
T Consensus 183 dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------------- 243 (312)
T 2iwi_A 183 DFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------------- 243 (312)
T ss_dssp CCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH---------------
T ss_pred EcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH---------------
Confidence 99999865432 22345689999999998876664 58999999999999999999986421
Q ss_pred hhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 972 ISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 972 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
++.+... ..+..++.++.+++.+||+.||++||++.|+++
T Consensus 244 ----~~~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 244 ----EILEAEL--------HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp ----HHHHTCC--------CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ----HHhhhcc--------CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0011111 111345667899999999999999999999987
No 281
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.3e-35 Score=328.85 Aligned_cols=260 Identities=30% Similarity=0.515 Sum_probs=218.7
Q ss_pred CCccEEEccccccCC--cCcccccCCCCCCeeecCC-CcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccc
Q 048205 364 PNLEELSLSGNNFSG--TIPSFIFNTSKLSTLELQR-NSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCK 440 (1027)
Q Consensus 364 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~ 440 (1027)
.+++.|+|++|++++ .+|..+.++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~--------------- 114 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS--------------- 114 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCE---------------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeC---------------
Confidence 468888888888887 7888888888888888884 8888888888888888888888877743
Q ss_pred cccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeec
Q 048205 441 YLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSL 520 (1027)
Q Consensus 441 ~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 520 (1027)
+.+|..++++++|++|++++|++++.+|..|+++++|++|+|
T Consensus 115 --------------------------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 115 --------------------------------------GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp --------------------------------------EECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred --------------------------------------CcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 345666677777777777777777777778888888888888
Q ss_pred cCceeecccCCCCCccccccccCccccccC-cccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCcc
Q 048205 521 KDNQLEGSIPDNLSFSCTLTSIPSTLWNLK-DILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKD 599 (1027)
Q Consensus 521 s~N~l~g~~p~~~~~~~~~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~ 599 (1027)
++|+++|. +|..++.++ .|++|++++|.+++.+|..++.+. |+.|++++|++++.+|..|+.+++
T Consensus 157 ~~N~l~~~-------------~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~ 222 (313)
T 1ogq_A 157 DGNRISGA-------------IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKN 222 (313)
T ss_dssp CSSCCEEE-------------CCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSC
T ss_pred cCCcccCc-------------CCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCC
Confidence 88887643 455666776 788888888888888888888887 999999999999889999999999
Q ss_pred ccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCcccccccCC
Q 048205 600 LQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFKGN 679 (1027)
Q Consensus 600 L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n 679 (1027)
|+.|+|++|++++.+|. ++.+++|++|+|++|+++|.+|..+..+++|+.|++++|+++|.+|..+.+.++....+.||
T Consensus 223 L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N 301 (313)
T 1ogq_A 223 TQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANN 301 (313)
T ss_dssp CSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSS
T ss_pred CCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCC
Confidence 99999999999976665 88899999999999999999999999999999999999999999999888999999999999
Q ss_pred ccccCCCcccccccc
Q 048205 680 ELLCGMPNLQVRSCR 694 (1027)
Q Consensus 680 ~~l~g~~~~~~~~c~ 694 (1027)
+.+||.|. ++|.
T Consensus 302 ~~lc~~p~---~~C~ 313 (313)
T 1ogq_A 302 KCLCGSPL---PACT 313 (313)
T ss_dssp SEEESTTS---SCCC
T ss_pred CCccCCCC---CCCC
Confidence 99999884 3673
No 282
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=7.2e-36 Score=354.46 Aligned_cols=264 Identities=24% Similarity=0.309 Sum_probs=199.4
Q ss_pred hCCCCccceeeccccceEEEEEec-CCceEEEEEEecc-cchhHHHHHHHHHHHhhccCCccceEEeEEec------CCe
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQ-YGRAIKSFDIECGMIKRIRHRNIIKFISSCSS------DDF 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 820 (1027)
.++|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 367999999999999999999875 6899999998754 23445678899999999999999999999765 667
Q ss_pred eEEEEEecCCCCHHHHHhcCC--ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCc---EEEeeec
Q 048205 821 KALVLEYMPYGSLEKCLYSSN--YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMV---AHLSDFG 895 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~---~kl~Dfg 895 (1027)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999997644 35888899999999999999999 899999999999999997765 9999999
Q ss_pred CCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHH
Q 048205 896 MAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIM 975 (1027)
Q Consensus 896 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 975 (1027)
.++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..|..........
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNE 242 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC-----
T ss_pred ccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccch
Confidence 998654322 234467999999999999999999999999999999999999999764221 2222111110000
Q ss_pred H-hhhccccC------ccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 048205 976 E-VVDANLLS------HEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIV 1022 (1027)
Q Consensus 976 ~-~~d~~~~~------~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl 1022 (1027)
. ........ ...........++..+.+++.+|+.+||++|||++|++
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 0 00000000 00001112335778899999999999999999997743
No 283
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.2e-34 Score=316.49 Aligned_cols=227 Identities=13% Similarity=0.060 Sum_probs=184.0
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEeccc---chhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEEE
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV~ 825 (1027)
++|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56899999999999999999976 58999999987543 233477889999999999999999999999999999999
Q ss_pred EecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCC
Q 048205 826 EYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQ 905 (1027)
Q Consensus 826 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~ 905 (1027)
||++|++|.+++... ....++.+++.|++.||+||| +.||+||||||+||+++.+|.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999998643 355678899999999999999 9999999999999999999999998543
Q ss_pred cceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCc
Q 048205 906 SLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSH 985 (1027)
Q Consensus 906 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 985 (1027)
|++ .++.++||||+||++|||++|+.||.......... .........
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--------------~~~~~~~~~ 221 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--------------PAERDTAGQ 221 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--------------ECCBCTTSC
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--------------HHHHHhccC
Confidence 333 36889999999999999999999998653321100 000000111
Q ss_pred cchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHhh
Q 048205 986 EDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVTKLA 1026 (1027)
Q Consensus 986 ~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~~L~ 1026 (1027)
..........++.++.+++.+||++||++| |+.|+++.|+
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 111112234567789999999999999999 9999999986
No 284
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.5e-33 Score=323.33 Aligned_cols=310 Identities=22% Similarity=0.242 Sum_probs=166.0
Q ss_pred cCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEE
Q 048205 49 VTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTL 128 (1027)
Q Consensus 49 l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 128 (1027)
+.++++|++++|.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+++..+..+++|++|
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC-cCCHHHhcCCCCCCEE
Confidence 345555555555555333333455555555555555555444445555555555555555544 2223333334444444
Q ss_pred EccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccC
Q 048205 129 FLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLT 208 (1027)
Q Consensus 129 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 208 (1027)
+|++|+++...+..|..+++|++|++++|.+++..|..|..+++|++|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 4444444433333334444444444444444443344444444444444444444422 1233334444444444443
Q ss_pred CCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCcccc
Q 048205 209 GTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIG 288 (1027)
Q Consensus 209 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~ 288 (1027)
+ +...++ |++|++++|.++. +|..
T Consensus 200 ~-----~~~~~~---------------------------------------L~~L~l~~n~l~~----------~~~~-- 223 (390)
T 3o6n_A 200 T-----LAIPIA---------------------------------------VEELDASHNSINV----------VRGP-- 223 (390)
T ss_dssp E-----EECCSS---------------------------------------CSEEECCSSCCCE----------EECC--
T ss_pred c-----cCCCCc---------------------------------------ceEEECCCCeeee----------cccc--
Confidence 1 112233 4444444444431 1111
Q ss_pred CcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccE
Q 048205 289 NLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEE 368 (1027)
Q Consensus 289 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~ 368 (1027)
..++|+.|++++|++++. ..+..+++|+.|++++|++.++.|..|.++++|++|+|++|++.+ +|... ..+++|++
T Consensus 224 ~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~-~~l~~L~~ 299 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYG-QPIPTLKV 299 (390)
T ss_dssp CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSS-SCCTTCCE
T ss_pred ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCccc-CCCCCCCE
Confidence 124566666666666643 456666777777777777777667777777777777777777643 33332 35677888
Q ss_pred EEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCC
Q 048205 369 LSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTS 426 (1027)
Q Consensus 369 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 426 (1027)
|+|++|+++ .+|..+..+++|++|+|++|+++.. + +..+++|++|++++|++++
T Consensus 300 L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 300 LDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp EECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred EECCCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 888888877 5666677778888888888887754 2 5667777777777777654
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.6e-33 Score=314.87 Aligned_cols=305 Identities=27% Similarity=0.445 Sum_probs=141.0
Q ss_pred ccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcE
Q 048205 48 NVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQT 127 (1027)
Q Consensus 48 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 127 (1027)
.+++|++|++++|.++ .++. +..+++|++|++++|.+++..+ +..+++|++|++++|++++ ++ .+..+++|++
T Consensus 42 ~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~--~~~~l~~L~~ 114 (347)
T 4fmz_A 42 ELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS--ALQNLTNLRE 114 (347)
T ss_dssp HHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG--GGTTCTTCSE
T ss_pred hcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch--HHcCCCcCCE
Confidence 4444555555555544 2222 4444555555555555442222 4444555555555554442 11 2333444444
Q ss_pred EEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeecccccc
Q 048205 128 LFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFL 207 (1027)
Q Consensus 128 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 207 (1027)
|++++|++.+..+ +..+++|++|++++|.....+ ..+..+++|++|++++|.+.+..+ +..+++|++|++++|.+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCC
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcc
Confidence 4444444442211 444444444444444333222 224444444444444444443221 44444444444444444
Q ss_pred CCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccc
Q 048205 208 TGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEI 287 (1027)
Q Consensus 208 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l 287 (1027)
++. +. +..+++|+.|++++|.+++ ++. +
T Consensus 190 ~~~-~~-~~~l~~L~~L~l~~n~l~~-------------------------------------------------~~~-~ 217 (347)
T 4fmz_A 190 EDI-SP-LASLTSLHYFTAYVNQITD-------------------------------------------------ITP-V 217 (347)
T ss_dssp CCC-GG-GGGCTTCCEEECCSSCCCC-------------------------------------------------CGG-G
T ss_pred ccc-cc-ccCCCccceeecccCCCCC-------------------------------------------------Cch-h
Confidence 422 11 4444444444444444431 111 3
Q ss_pred cCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCcc
Q 048205 288 GNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLE 367 (1027)
Q Consensus 288 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~ 367 (1027)
..+++|++|++++|++++..+ +..+++|++|++++|.++++ ..+..+++|++|++++|++.+ ++ .+..+++|+
T Consensus 218 ~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~--~~~~l~~L~ 290 (347)
T 4fmz_A 218 ANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-IS--VLNNLSQLN 290 (347)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG--GGGGCTTCS
T ss_pred hcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-Ch--hhcCCCCCC
Confidence 334455555555555543322 44555555555555555443 234445555555555555532 21 233455666
Q ss_pred EEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCC
Q 048205 368 ELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLT 425 (1027)
Q Consensus 368 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 425 (1027)
+|+|++|++++..|..+.++++|++|++++|++++..| +..+++|++|++++|+|+
T Consensus 291 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 291 SLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp EEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred EEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 66666666655555556666666666666666665444 555666666666666543
No 286
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=5.9e-34 Score=313.97 Aligned_cols=229 Identities=18% Similarity=0.247 Sum_probs=180.5
Q ss_pred CCCCcc-ceeeccccceEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHH-hhccCCccceEEeEEec----CCeeE
Q 048205 750 NGFSEN-NLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMI-KRIRHRNIIKFISSCSS----DDFKA 822 (1027)
Q Consensus 750 ~~f~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~~ 822 (1027)
++|... +.||+|+||.||+|+.. +++.||||+++. ...+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 78999999999999875 789999999863 24566788887 66689999999999876 67789
Q ss_pred EEEEecCCCCHHHHHhcCC-ccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcC---CCcEEEeeecCCc
Q 048205 823 LVLEYMPYGSLEKCLYSSN-YILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDD---NMVAHLSDFGMAK 898 (1027)
Q Consensus 823 lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~---~~~~kl~Dfgla~ 898 (1027)
+||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998754 46899999999999999999999 999999999999999998 7899999999987
Q ss_pred ccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhh
Q 048205 899 PFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVV 978 (1027)
Q Consensus 899 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1027)
... +..++.++||||+||++|||++|+.||........ .....
T Consensus 169 ~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------------~~~~~ 211 (299)
T 3m2w_A 169 ETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------------SPGMK 211 (299)
T ss_dssp ECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSC
T ss_pred ccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------------hHHHH
Confidence 432 13467899999999999999999999975422110 00000
Q ss_pred hccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 048205 979 DANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIVT 1023 (1027)
Q Consensus 979 d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl~ 1023 (1027)
.................++.++.+++.+||+.||++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 212 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000000111111223457788999999999999999999999986
No 287
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-34 Score=332.67 Aligned_cols=239 Identities=17% Similarity=0.141 Sum_probs=181.2
Q ss_pred CCCCccceeeccccceEEEEEec-CCceEEEEEEecccc---hhHHHHHHHHHHHhhccC-CccceE-------------
Q 048205 750 NGFSENNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG---RAIKSFDIECGMIKRIRH-RNIIKF------------- 811 (1027)
Q Consensus 750 ~~f~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h-~niv~l------------- 811 (1027)
..|...+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| ++...+
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34677889999999999999965 799999999874322 235778999999999987 221111
Q ss_pred --------EeEEec-----CCeeEEEEEecCCCCHHHHHh------cCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeE
Q 048205 812 --------ISSCSS-----DDFKALVLEYMPYGSLEKCLY------SSNYILDIFQRLNIMIDVASALEYLHFGYSVPII 872 (1027)
Q Consensus 812 --------~~~~~~-----~~~~~lV~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~iv 872 (1027)
+.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+||| +++|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcc
Confidence 111111 12356777766 569999884 23455788899999999999999999 99999
Q ss_pred eccCCCCcEEEcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccc----------cCCCCCcchhHHHHHHHH
Q 048205 873 HCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYG----------REGRVSTNGDVYSFGIML 942 (1027)
Q Consensus 873 H~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwslGvil 942 (1027)
||||||+||+++.++.+||+|||+++.... .....+| +.|+|||++ ....++.++|||||||++
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 999999999999999999999999885432 1344567 999999998 556688999999999999
Q ss_pred HHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 048205 943 METFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERINAKEIV 1022 (1027)
Q Consensus 943 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps~~evl 1022 (1027)
|||++|+.||........ .+... .....++.++.+++.+||..||++||++.|++
T Consensus 308 ~elltg~~Pf~~~~~~~~-----------------~~~~~--------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l 362 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----------------SEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 362 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----------------SGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred HHHHHCCCCCCCcchhhh-----------------HHHHH--------hhcccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999976432111 01110 11123456789999999999999999988876
Q ss_pred H
Q 048205 1023 T 1023 (1027)
Q Consensus 1023 ~ 1023 (1027)
+
T Consensus 363 ~ 363 (413)
T 3dzo_A 363 E 363 (413)
T ss_dssp T
T ss_pred h
Confidence 4
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.3e-32 Score=310.29 Aligned_cols=307 Identities=24% Similarity=0.353 Sum_probs=247.3
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLS 101 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 101 (1027)
+..+++|++|++++|.+. .+| .+..+++|++|++++|++++ ++. +..+++|++|++++|.+++ ++ .+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~ 113 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLR 113 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCS
T ss_pred chhcccccEEEEeCCccc-cch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCC
Confidence 567788899999988887 455 48888899999999998874 444 8888999999999998884 33 688889999
Q ss_pred eEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCc
Q 048205 102 NLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQN 181 (1027)
Q Consensus 102 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 181 (1027)
+|++++|++++ ++. +..+++|++|++++|......+ .+..+++|++|++++|.+.+..+ +..+++|++|++++|
T Consensus 114 ~L~l~~n~i~~-~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 114 ELYLNEDNISD-ISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp EEECTTSCCCC-CGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred EEECcCCcccC-chh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 99999998874 333 7788889999999886654443 48888999999999998875433 888899999999999
Q ss_pred cCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCcccc
Q 048205 182 RLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLE 261 (1027)
Q Consensus 182 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~ 261 (1027)
.+++..+ +..+++|++|++++|.+++..+ +..+++|++|++++|++++ ++. +..+++|+
T Consensus 188 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~---------------~~~--~~~l~~L~ 246 (347)
T 4fmz_A 188 QIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITD---------------LSP--LANLSQLT 246 (347)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC---------------CGG--GTTCTTCC
T ss_pred ccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCC---------------Ccc--hhcCCCCC
Confidence 9885433 7888899999999999885543 7888899999999998872 333 56788899
Q ss_pred EEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCc
Q 048205 262 EIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTL 341 (1027)
Q Consensus 262 ~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 341 (1027)
+|++++|.+++ + ..+..+++|++|++++|+++++ ..+..+++|+.|++++|++.+..+..+.++++|
T Consensus 247 ~L~l~~n~l~~----------~-~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 247 WLEIGTNQISD----------I-NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp EEECCSSCCCC----------C-GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred EEECCCCccCC----------C-hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 99999998873 2 3577888999999999999875 468889999999999999998888889999999
Q ss_pred ceEEccCccccccCCCCccCCCCCccEEEccccccC
Q 048205 342 KFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFS 377 (1027)
Q Consensus 342 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 377 (1027)
++|++++|++++..| ...+++|++|++++|.++
T Consensus 314 ~~L~L~~n~l~~~~~---~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP---LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG---GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC---hhhhhccceeehhhhccc
Confidence 999999999976555 456889999999999885
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-34 Score=351.25 Aligned_cols=236 Identities=22% Similarity=0.326 Sum_probs=190.7
Q ss_pred hCCCCccceeeccccceEEEEEec--CCceEEEEEEeccc-chhHHHHHHHHHHHhhccCCccceEEeEEecCCe-----
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQ--DGMEVAVKVFDLQY-GRAIKSFDIECGMIKRIRHRNIIKFISSCSSDDF----- 820 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 820 (1027)
.++|++.+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367999999999999999999975 68999999886432 3445678899999999999999999999987665
Q ss_pred eEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCccc
Q 048205 821 KALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 821 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
.++||||++|++|.+++.. .+++.++..++.||++||+||| +.+|+||||||+||+++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 7999999999999987754 5899999999999999999999 9999999999999999885 9999999999865
Q ss_pred ccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhc
Q 048205 901 LKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDA 980 (1027)
Q Consensus 901 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 980 (1027)
... ....||++|+|||++.+.. +.++|||||||++|+|++|.+||........
T Consensus 232 ~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~-------------------- 284 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL-------------------- 284 (681)
T ss_dssp TCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--------------------
T ss_pred ccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--------------------
Confidence 322 3457999999999987654 8899999999999999999988765321110
Q ss_pred cccCccchhhhHHhhhHHHHHHHHHHhcccCCCCCCC-HHHHHHHh
Q 048205 981 NLLSHEDKHFVAKEQCMSFVFNLAMKCTIESPEERIN-AKEIVTKL 1025 (1027)
Q Consensus 981 ~~~~~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~Rps-~~evl~~L 1025 (1027)
. ........+..+.+++.+||++||++||+ ++++.+.+
T Consensus 285 -----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 285 -----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp -----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred -----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 0 00011123456889999999999999995 55555443
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-33 Score=336.49 Aligned_cols=308 Identities=20% Similarity=0.209 Sum_probs=134.4
Q ss_pred CCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEE
Q 048205 98 SSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLH 177 (1027)
Q Consensus 98 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 177 (1027)
++++.|++++|.++ .++..++..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 51 ~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 51 NNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp CCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 34444444444443 33444444444444444444444444444444444444444444444444444444444444444
Q ss_pred ccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCC
Q 048205 178 LDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNI 257 (1027)
Q Consensus 178 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l 257 (1027)
|++|.+++..+..|+.+++|++|+|++|.+++..|..|.++++|++|++++|.+++. + +..+
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---------------~---~~~l 191 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---------------D---LSLI 191 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---------------C---GGGC
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---------------C---hhhh
Confidence 444444433333344444444444444444444444444444455555544444311 1 1123
Q ss_pred ccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccc
Q 048205 258 PFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFN 337 (1027)
Q Consensus 258 ~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 337 (1027)
+.|+.|++++|.+++ +....+|+.|++++|.+..+.+..+ ++|+.|+|++|.+++. ..+..
T Consensus 192 ~~L~~L~l~~n~l~~--------------l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~--~~l~~ 252 (597)
T 3oja_B 192 PSLFHANVSYNLLST--------------LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT--AWLLN 252 (597)
T ss_dssp TTCSEEECCSSCCSE--------------EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC--GGGGG
T ss_pred hhhhhhhcccCcccc--------------ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC--hhhcc
Confidence 334444444444431 1112344444444444443322111 2344444444444431 33444
Q ss_pred cCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEE
Q 048205 338 VSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWL 417 (1027)
Q Consensus 338 l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 417 (1027)
+++|+.|+|++|.+.+..|.. +..+++|++|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..+..+++|++|
T Consensus 253 l~~L~~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 253 YPGLVEVDLSYNELEKIMYHP-FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp CTTCSEEECCSSCCCEEESGG-GTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CCCCCEEECCCCccCCCCHHH-hcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 444444444444443332222 2234444444444444442 3334444445555555555554 234444455555555
Q ss_pred ecCCCCCCCCCCccccccccccccccEeeccCCCCC
Q 048205 418 DLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLG 453 (1027)
Q Consensus 418 ~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~ 453 (1027)
+|++|+|+.++ ...++.|++|++++|++.
T Consensus 330 ~L~~N~l~~~~-------~~~~~~L~~L~l~~N~~~ 358 (597)
T 3oja_B 330 YLDHNSIVTLK-------LSTHHTLKNLTLSHNDWD 358 (597)
T ss_dssp ECCSSCCCCCC-------CCTTCCCSEEECCSSCEE
T ss_pred ECCCCCCCCcC-------hhhcCCCCEEEeeCCCCC
Confidence 55555554432 123445555555555543
No 291
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.4e-32 Score=307.73 Aligned_cols=288 Identities=23% Similarity=0.299 Sum_probs=234.1
Q ss_pred CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCC
Q 048205 27 RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 106 (1027)
+++.++++++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+++
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6999999999998 7888775 789999999999998888899999999999999999998888999999999999999
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccc--cccCccccCCCCCcEEEccCccCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFS--GDIPKEIGNLTKLKYLHLDQNRLQ 184 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~ 184 (1027)
+|+++ .++...+ ++|++|++++|++++..+..|.++++|++|++++|.++ +..+..|..+ +|++|++++|+++
T Consensus 111 ~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 111 KNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp SSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 99998 5665544 78999999999999888888999999999999999996 3677888888 9999999999998
Q ss_pred CCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEE
Q 048205 185 GEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIY 264 (1027)
Q Consensus 185 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~ 264 (1027)
+ +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|++++ ++...+..+++|++|+
T Consensus 186 ~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~---------------~~~~~~~~l~~L~~L~ 247 (332)
T 2ft3_A 186 G-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRM---------------IENGSLSFLPTLRELH 247 (332)
T ss_dssp S-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCC---------------CCTTGGGGCTTCCEEE
T ss_pred c-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCc---------------CChhHhhCCCCCCEEE
Confidence 5 555544 789999999999998877889999999999999999873 3444455677888888
Q ss_pred eccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCc------CcccceeccCcccc--cccCcccc
Q 048205 265 LSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNL------HNLEWMIFSFNKLV--GVVPTTIF 336 (1027)
Q Consensus 265 Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~--~~~~~~~~ 336 (1027)
+++|+++ .+|.++..+++|+.|++++|+|+++.+..|... ..|+.|++++|.+. ++.|.+|.
T Consensus 248 L~~N~l~----------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 248 LDNNKLS----------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp CCSSCCC----------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCcCe----------ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 8888887 566667778888888888888887777766653 45666677776665 55566666
Q ss_pred ccCCcceEEccCcc
Q 048205 337 NVSTLKFLYLGSNS 350 (1027)
Q Consensus 337 ~l~~L~~L~L~~N~ 350 (1027)
.+++|+.+++++|+
T Consensus 318 ~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 318 CVTDRLAIQFGNYK 331 (332)
T ss_dssp TBCCSTTEEC----
T ss_pred ccchhhhhhccccc
Confidence 66666666666553
No 292
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-33 Score=312.20 Aligned_cols=232 Identities=32% Similarity=0.484 Sum_probs=145.5
Q ss_pred CCCCccEEEccc-cccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccc
Q 048205 362 RLPNLEELSLSG-NNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCK 440 (1027)
Q Consensus 362 ~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~ 440 (1027)
.+++|++|+|++ |++.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.++
T Consensus 74 ~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--------------- 138 (313)
T 1ogq_A 74 NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALS--------------- 138 (313)
T ss_dssp GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEE---------------
T ss_pred CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccC---------------
Confidence 344455555552 5555555555555555555555555555555555555555555555555422
Q ss_pred cccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhccc-ccceee
Q 048205 441 YLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLK-KLQLLS 519 (1027)
Q Consensus 441 ~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~ 519 (1027)
+.+|..++.+++|++|++++|++++.+|..++.++ +|++|+
T Consensus 139 --------------------------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~ 180 (313)
T 1ogq_A 139 --------------------------------------GTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMT 180 (313)
T ss_dssp --------------------------------------SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEE
T ss_pred --------------------------------------CcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEE
Confidence 22333444444444444444444445555555555 556666
Q ss_pred ccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCcc
Q 048205 520 LKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKD 599 (1027)
Q Consensus 520 Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~ 599 (1027)
|++|+++|.+ |..+..++ |++|++++|.+++.+|..++.+++|+.|++++|++++.+|. ++.+++
T Consensus 181 L~~N~l~~~~-------------~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~ 245 (313)
T 1ogq_A 181 ISRNRLTGKI-------------PPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKN 245 (313)
T ss_dssp CCSSEEEEEC-------------CGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTT
T ss_pred CcCCeeeccC-------------ChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCC
Confidence 6666654332 33444444 66666666666666777777777888888888888765555 777788
Q ss_pred ccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCC-CCCCC
Q 048205 600 LQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNK-LEGEI 662 (1027)
Q Consensus 600 L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~-l~g~~ 662 (1027)
|++|+|++|+++|.+|..++.+++|+.|+|++|+++|.+|.. +.+++|+.+++++|+ ++|.+
T Consensus 246 L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred CCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence 888888888888778888888888888888888888888776 777888888888887 77753
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.5e-32 Score=304.34 Aligned_cols=289 Identities=24% Similarity=0.296 Sum_probs=222.6
Q ss_pred CCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeC
Q 048205 26 KRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDL 105 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 105 (1027)
.+++.++++++.++ .+|..+. +.|++|+|++|+|++..+..|+++++|++|+|++|.+++..|..|..+++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 37899999999988 6787665 68899999999998777778999999999999999999877889999999999999
Q ss_pred CcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccc--ccCccccCCCCCcEEEccCccC
Q 048205 106 SVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSG--DIPKEIGNLTKLKYLHLDQNRL 183 (1027)
Q Consensus 106 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l 183 (1027)
++|+++ .++...+ ++|++|++++|++++..+..|.++++|++|++++|.+.. ..+..|.++++|++|++++|++
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 999987 5555443 689999999999998888889999999999999998863 6778888899999999999998
Q ss_pred CCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEE
Q 048205 184 QGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEI 263 (1027)
Q Consensus 184 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L 263 (1027)
+. +|..+. ++|++|++++|++++..|..|..+++|+.|++++|++++ ++...+..+++|++|
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~---------------~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA---------------VDNGSLANTPHLREL 245 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCE---------------ECTTTGGGSTTCCEE
T ss_pred cc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCce---------------eChhhccCCCCCCEE
Confidence 84 555443 789999999999988778888899999999999998873 333445567778888
Q ss_pred EeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCc------CcccceeccCccccc--ccCccc
Q 048205 264 YLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNL------HNLEWMIFSFNKLVG--VVPTTI 335 (1027)
Q Consensus 264 ~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l------~~L~~L~Ls~N~l~~--~~~~~~ 335 (1027)
++++|+++ .+|.++..+++|++|++++|+|+++.+..|... ..|+.|++++|.+.. +.|..|
T Consensus 246 ~L~~N~l~----------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f 315 (330)
T 1xku_A 246 HLNNNKLV----------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTF 315 (330)
T ss_dssp ECCSSCCS----------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGG
T ss_pred ECCCCcCc----------cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcccc
Confidence 88888877 556667777788888888888877766666533 445555555555532 334444
Q ss_pred cccCCcceEEccCc
Q 048205 336 FNVSTLKFLYLGSN 349 (1027)
Q Consensus 336 ~~l~~L~~L~L~~N 349 (1027)
..+.+++.++|++|
T Consensus 316 ~~~~~l~~l~L~~N 329 (330)
T 1xku_A 316 RCVYVRAAVQLGNY 329 (330)
T ss_dssp TTCCCGGGEEC---
T ss_pred ccccceeEEEeccc
Confidence 44444454544444
No 294
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1.3e-33 Score=316.89 Aligned_cols=243 Identities=18% Similarity=0.162 Sum_probs=185.8
Q ss_pred hCCCCccceeeccccceEEEEEecCCceEEEEEEeccc--------chhHHHHHHHHHHHhhcc---------CCccceE
Q 048205 749 TNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQY--------GRAIKSFDIECGMIKRIR---------HRNIIKF 811 (1027)
Q Consensus 749 ~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~---------h~niv~l 811 (1027)
.++|+..+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|+++++.++ ||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 68999999997542 223477889999999886 6666655
Q ss_pred EeE-----------------Eec-------------CCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHH
Q 048205 812 ISS-----------------CSS-------------DDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALE 861 (1027)
Q Consensus 812 ~~~-----------------~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 861 (1027)
.++ +.+ .+..++||||+++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 554 333 6789999999999977666644 34799999999999999999
Q ss_pred HhhcCCCCCeEeccCCCCcEEEcCCC--------------------cEEEeeecCCcccccCCCcceecccccCccccCc
Q 048205 862 YLHFGYSVPIIHCDLKPNNVLLDDNM--------------------VAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAP 921 (1027)
Q Consensus 862 ~LH~~~~~~ivH~Dlkp~NIll~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aP 921 (1027)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+.... ...+||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 9992 36899999999999999887 999999999986532 234799999999
Q ss_pred ccccCCCCCcchhHHHHHHH-HHHHHcCCCCCCCCcccchhHHHHHHHHHhhhHHHhhhccccCccchhhhHHhhhHHHH
Q 048205 922 EYGREGRVSTNGDVYSFGIM-LMETFTRKKPTDESFTGEMTLKRWVNDLLLISIMEVVDANLLSHEDKHFVAKEQCMSFV 1000 (1027)
Q Consensus 922 E~~~~~~~~~~~DvwslGvi-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l 1000 (1027)
|++.+.. +.++||||+|++ .+++++|..||.. ..|..... ..+.... ..........+..++.++
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLT----DKMLKQM-TFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHH----HHHHHTC-CCSSCCCSHHHHHHHHHH
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHH----Hhhhhhh-ccCcccchhhhhhcCHHH
Confidence 9998766 899999998776 7788889988742 12322111 1111111 111112223455688899
Q ss_pred HHHHHHhcccCCCCCCCHHHHH
Q 048205 1001 FNLAMKCTIESPEERINAKEIV 1022 (1027)
Q Consensus 1001 ~~Li~~cl~~dP~~Rps~~evl 1022 (1027)
.+|+.+||+.| |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999976 999998
No 295
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=6.4e-32 Score=302.37 Aligned_cols=294 Identities=21% Similarity=0.265 Sum_probs=200.0
Q ss_pred cccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCcccccc
Q 048205 259 FLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNV 338 (1027)
Q Consensus 259 ~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 338 (1027)
.++.+++++|.++ .+|..+. ++|+.|++++|+++++.+..|.++++|++|++++|+++++.|..|.++
T Consensus 34 ~l~~l~~~~~~l~----------~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 101 (332)
T 2ft3_A 34 HLRVVQCSDLGLK----------AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL 101 (332)
T ss_dssp ETTEEECCSSCCS----------SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTC
T ss_pred cCCEEECCCCCcc----------ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCc
Confidence 5788888888877 4454443 588999999999998888889999999999999999998888889999
Q ss_pred CCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCccc--CCCCcccCCcccccE
Q 048205 339 STLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFS--GFIPNTFGNLRNLKW 416 (1027)
Q Consensus 339 ~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~ 416 (1027)
++|++|++++|++. .+|...+ ++|++|++++|++++..+..|.++++|++|++++|.++ +..|..|..+ +|++
T Consensus 102 ~~L~~L~L~~n~l~-~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~ 176 (332)
T 2ft3_A 102 RKLQKLYISKNHLV-EIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNY 176 (332)
T ss_dssp TTCCEEECCSSCCC-SCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSC
T ss_pred CCCCEEECCCCcCC-ccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCE
Confidence 99999999999885 6676654 68889999988888766667888888888888888885 3677778877 8888
Q ss_pred EecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEe
Q 048205 417 LDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYL 496 (1027)
Q Consensus 417 L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L 496 (1027)
|++++|+++.+|..+. ++|++|++++|+++++ .|..+..+++|++|++
T Consensus 177 L~l~~n~l~~l~~~~~-------~~L~~L~l~~n~i~~~-------------------------~~~~l~~l~~L~~L~L 224 (332)
T 2ft3_A 177 LRISEAKLTGIPKDLP-------ETLNELHLDHNKIQAI-------------------------ELEDLLRYSKLYRLGL 224 (332)
T ss_dssp CBCCSSBCSSCCSSSC-------SSCSCCBCCSSCCCCC-------------------------CTTSSTTCTTCSCCBC
T ss_pred EECcCCCCCccCcccc-------CCCCEEECCCCcCCcc-------------------------CHHHhcCCCCCCEEEC
Confidence 8888888877665432 4556666666655433 3344555666666677
Q ss_pred cCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccc
Q 048205 497 GVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVL 576 (1027)
Q Consensus 497 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 576 (1027)
++|++++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|.+++..+..++...
T Consensus 225 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--------------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~-- 288 (332)
T 2ft3_A 225 GHNQIRMIENGSLSFLPTLRELHLDNNKLS--------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVG-- 288 (332)
T ss_dssp CSSCCCCCCTTGGGGCTTCCEEECCSSCCC--------------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSS--
T ss_pred CCCcCCcCChhHhhCCCCCCEEECCCCcCe--------------ecChhhhcCccCCEEECCCCCCCccChhHccccc--
Confidence 777666666666666666666666666652 3444444455555555555555443333332210
Q ss_pred cEEcccccccccccchhhccCccccEEEccCCccc--cCcccccccccccccccccccc
Q 048205 577 VQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQ--GSIPDSIGDMINLKSLNLSNNN 633 (1027)
Q Consensus 577 ~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--g~ip~~~~~l~~L~~L~l~~N~ 633 (1027)
+ -.....|+.|++++|.+. +..|..+..+++|+.++|++|+
T Consensus 289 --------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 289 --------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp --------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred --------------c--ccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 0 001245666666666665 4455566666666666666664
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=4.1e-31 Score=295.64 Aligned_cols=288 Identities=23% Similarity=0.287 Sum_probs=146.6
Q ss_pred CCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEcc
Q 048205 76 LEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLS 155 (1027)
Q Consensus 76 L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 155 (1027)
++.++++++.++ .+|..+. ++|++|++++|+++ .++...+..+++|++|+|++|++++..|..|..+++|++|+++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCC-CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCC-EeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 444444444443 2333222 33444444444443 2222233333444444444444444445555555555555555
Q ss_pred CCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCC--CCCccccCCCCCCEEEccCccCCC
Q 048205 156 INDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTG--TIPPSIFNLSSLSDLELSFNSLTG 233 (1027)
Q Consensus 156 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~ 233 (1027)
+|.++ .+|..+. ++|++|++++|++++..+..|..+++|++|++++|.++. ..+..+.++++|++|++++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 55555 2333332 455555555555554444445555555555555555532 33444555555555555555543
Q ss_pred CCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccC
Q 048205 234 NFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDN 313 (1027)
Q Consensus 234 ~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~ 313 (1027)
.+|..+. ++|++|++++|+++++.+..|..
T Consensus 185 ------------------------------------------------~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~ 214 (330)
T 1xku_A 185 ------------------------------------------------TIPQGLP--PSLTELHLDGNKITKVDAASLKG 214 (330)
T ss_dssp ------------------------------------------------SCCSSCC--TTCSEEECTTSCCCEECTGGGTT
T ss_pred ------------------------------------------------cCCcccc--ccCCEEECCCCcCCccCHHHhcC
Confidence 1222221 45666666666666666666666
Q ss_pred cCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccC------C
Q 048205 314 LHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFN------T 387 (1027)
Q Consensus 314 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l 387 (1027)
+++|+.|++++|+++++.+..+..+++|++|++++|++. .+|..+ ..+++|++|+|++|++++..+..|.. .
T Consensus 215 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l-~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~ 292 (330)
T 1xku_A 215 LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGL-ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKK 292 (330)
T ss_dssp CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTT-TTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTS
T ss_pred CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhh-ccCCCcCEEECCCCcCCccChhhcCCccccccc
Confidence 666666666666666666656666666666666666664 444432 34556666666666665444444432 2
Q ss_pred CCCCeeecCCCcccC--CCCcccCCcccccEEecCCCC
Q 048205 388 SKLSTLELQRNSFSG--FIPNTFGNLRNLKWLDLGDNY 423 (1027)
Q Consensus 388 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~ 423 (1027)
..|+.|++++|.+.. +.|..|..+.+++.++|++|+
T Consensus 293 ~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 293 ASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 455666666666542 445566666666666666653
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.4e-34 Score=339.96 Aligned_cols=357 Identities=19% Similarity=0.156 Sum_probs=198.9
Q ss_pred CCCcEEecCCCcCcccCCcc-CcCCCCCcEEEccCCcccc----cCCccccccCCCcEEEccccccceeCcccc-cCCC-
Q 048205 2 SNLEYLFLKSNMFHGKIPST-LSNCKRLRNISLSLNDFSG----TIPKEIGNVTTLIGLHLRGNKLQGEIPEEL-GNLA- 74 (1027)
Q Consensus 2 ~~l~~L~l~~n~l~~~~~~~-~~~~~~L~~L~L~~n~l~~----~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l-~~l~- 74 (1027)
++|++|++++|++++..... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56778888888876544333 6777888888888888774 345666777888888888888765444333 3344
Q ss_pred ---CCCEEEccCcccCC----ccCccccCCCCCCeEeCCcccccccchhhh----hcCCCCCcEEEccCCcCCccC----
Q 048205 75 ---ELEELWLQNNFLTG----TIPSSIFNLSSLSNLDLSVNNLTGELLANI----CSNLPLLQTLFLDENNFDGKI---- 139 (1027)
Q Consensus 75 ---~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~----~~~l~~L~~L~L~~N~l~~~~---- 139 (1027)
+|++|+|++|.++. .++..+..+++|++|++++|.+++.....+ ....++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 58888888888773 346777777888888888887764333322 223445777777777666532
Q ss_pred cccccCCCCCcEEEccCCccccccCcccc-----CCCCCcEEEccCccCCCC----CChhccCCCCCCeeeccccccCCC
Q 048205 140 PSTLLRCKHLQTLSLSINDFSGDIPKEIG-----NLTKLKYLHLDQNRLQGE----IPEELGNLAELEKLQLQNNFLTGT 210 (1027)
Q Consensus 140 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ 210 (1027)
+..+..+++|++|++++|.+....+..+. ..++|++|+|++|.++.. ++..+..+++|++|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 44455566666666666666543333222 244566666666665542 244444555555555555555432
Q ss_pred C-----CccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCc
Q 048205 211 I-----PPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPK 285 (1027)
Q Consensus 211 ~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~ 285 (1027)
. +..+..+++|++|++++|.++ +.-. ..++.
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~---------------------------------------~~~~-----~~l~~ 278 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGIT---------------------------------------AKGC-----GDLCR 278 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCC---------------------------------------HHHH-----HHHHH
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCC---------------------------------------HHHH-----HHHHH
Confidence 1 111223445555555555443 1100 01233
Q ss_pred cccCcCCccceeccCccccccCCccccC-----cCcccceeccCcccccc----cCccccccCCcceEEccCccccccCC
Q 048205 286 EIGNLAKLEKLDLQFNRLQCVIPHEIDN-----LHNLEWMIFSFNKLVGV----VPTTIFNVSTLKFLYLGSNSFFGRLP 356 (1027)
Q Consensus 286 ~l~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~ 356 (1027)
.+..+++|++|++++|+++...+..+.. .++|+.|++++|.+++. ++..+..+++|++|++++|.+.+..+
T Consensus 279 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~ 358 (461)
T 1z7x_W 279 VLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGV 358 (461)
T ss_dssp HHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHH
T ss_pred HHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccH
Confidence 3444556666666666655433333322 14566666666665543 23444455556666666665532211
Q ss_pred CCc----cCCCCCccEEEccccccCC----cCcccccCCCCCCeeecCCCcccC
Q 048205 357 SSA----DVRLPNLEELSLSGNNFSG----TIPSFIFNTSKLSTLELQRNSFSG 402 (1027)
Q Consensus 357 ~~~----~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 402 (1027)
... ....++|++|+|++|++++ .+|..+..+++|++|++++|++++
T Consensus 359 ~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 359 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp HHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred HHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 111 0113456666666666654 455555556666666666666553
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2e-34 Score=338.71 Aligned_cols=365 Identities=17% Similarity=0.123 Sum_probs=224.4
Q ss_pred ccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCcccccc----CCccccCcCcccceeccCcccccccCc
Q 048205 258 PFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCV----IPHEIDNLHNLEWMIFSFNKLVGVVPT 333 (1027)
Q Consensus 258 ~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 333 (1027)
+.|++|++++|+++.. .....+..+++|++|+|++|+++.. ++..+..+++|++|++++|.+.+..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~--------~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 74 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDA--------RWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVH 74 (461)
T ss_dssp EEEEEEEEESCCCCHH--------HHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHH
T ss_pred ccceehhhhhcccCch--------hHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHH
Confidence 5677788887777631 1112255667777777777777642 344555667777777777776654333
Q ss_pred ccc-ccC----CcceEEccCccccc----cCCCCccCCCCCccEEEccccccCCcCcccccC-----CCCCCeeecCCCc
Q 048205 334 TIF-NVS----TLKFLYLGSNSFFG----RLPSSADVRLPNLEELSLSGNNFSGTIPSFIFN-----TSKLSTLELQRNS 399 (1027)
Q Consensus 334 ~~~-~l~----~L~~L~L~~N~l~~----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~ 399 (1027)
.+. .+. +|++|+|++|++.. .++. .+..+++|++|+|++|.+.+..+..+.. .++|++|+|++|+
T Consensus 75 ~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~-~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 153 (461)
T 1z7x_W 75 CVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSS-TLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCS 153 (461)
T ss_dssp HHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHH-HTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHHHHHhhCCCceeEEEccCCCCCHHHHHHHHH-HHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCC
Confidence 322 233 46666666665542 1222 1234555566666655554322222221 3345555555555
Q ss_pred ccCCC----CcccCCcccccEEecCCCCCCCCCCc-cccccccccccccEeeccCCCCCCCCCccccCcccccceeecCC
Q 048205 400 FSGFI----PNTFGNLRNLKWLDLGDNYLTSSTSE-LSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPN 474 (1027)
Q Consensus 400 l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~~~-l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~ 474 (1027)
+++.. +..+..+++|++|++++|.++..... +...-....++|++|++++|.+++....
T Consensus 154 l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~---------------- 217 (461)
T 1z7x_W 154 LSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR---------------- 217 (461)
T ss_dssp CBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH----------------
T ss_pred CCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH----------------
Confidence 55422 33344455555555555554422111 0000000123445555555544321000
Q ss_pred CccccccCcccccccccceEEecCccccCchh-----HhhhcccccceeeccCceeecccCCCCCccccccccCcccccc
Q 048205 475 SNISGSIPKEINNLTNLIAIYLGVNKLNGSIL-----IALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNL 549 (1027)
Q Consensus 475 n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l 549 (1027)
.++..+..+++|++|++++|++++... ..+..+++|++|+|++|++++. ....++..+.++
T Consensus 218 -----~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~---------~~~~l~~~l~~~ 283 (461)
T 1z7x_W 218 -----DLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAK---------GCGDLCRVLRAK 283 (461)
T ss_dssp -----HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHH---------HHHHHHHHHHHC
T ss_pred -----HHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHH---------HHHHHHHHHhhC
Confidence 256677788888899999888875432 2233578899999998888532 112366677778
Q ss_pred CcccEEecCCCccccCccccccCc-----ccccEEcccccccccc----cchhhccCccccEEEccCCccccCccccccc
Q 048205 550 KDILCLNLSLNFFTGPLPLEIGNL-----KVLVQIDLSINNFSDV----IPTTIGGLKDLQYLFLKYNRLQGSIPDSIGD 620 (1027)
Q Consensus 550 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~ 620 (1027)
++|+.|++++|.+++..+..+... ++|+.|++++|.+++. +|..+..+++|++|+|++|++++..+..++.
T Consensus 284 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 363 (461)
T 1z7x_W 284 ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQ 363 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHH
Confidence 889999999998876544444432 6889999999998865 6777888899999999999888655555553
Q ss_pred -----cccccccccccccccC----CchhhhhcccCCcceeccCCCCCCC
Q 048205 621 -----MINLKSLNLSNNNLFG----IIPISLEKLLDLKDINVSFNKLEGE 661 (1027)
Q Consensus 621 -----l~~L~~L~l~~N~l~~----~~p~~l~~l~~L~~l~l~~N~l~g~ 661 (1027)
.++|++|+|++|++++ .+|..+..+++|+.|++++|++++.
T Consensus 364 ~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 364 GLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred HHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 5689999999999886 7888888899999999999988753
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.4e-29 Score=274.71 Aligned_cols=284 Identities=19% Similarity=0.213 Sum_probs=212.4
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEcccccccee--CcccccCCCCCCEEEcc
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGE--IPEELGNLAELEELWLQ 82 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~--~p~~l~~l~~L~~L~L~ 82 (1027)
+.++.++++++ .+|..+. ++|++|+|++|+++...+..+..+++|++|+|++|+++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 56788888888 5665543 6889999999998844444578889999999999988733 36777788899999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccc-
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSG- 161 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~- 161 (1027)
+|.++ .+|..+..+++|++|++++|++++......+..+++|++|++++|.+.+..+..|..+++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99888 5677788889999999999988754444677788888888888888888888888888888888888888875
Q ss_pred ccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhh
Q 048205 162 DIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHI 241 (1027)
Q Consensus 162 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 241 (1027)
..|..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----- 240 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK----- 240 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS-----
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH-----
Confidence 578888888888888888888887778888888888888888888887766678888888888888888874333
Q ss_pred hhhccccCCccccCCC-ccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCc
Q 048205 242 VNRLSAELPAKFCNNI-PFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNL 314 (1027)
Q Consensus 242 ~~~~~~~l~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 314 (1027)
..+..+ +.|++|+|++|.+++.. .+.....-+...+.+....+.+.+..|..+.+.
T Consensus 241 ----------~~~~~~~~~L~~L~L~~N~~~~~c-------~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 241 ----------QELQHFPSSLAFLNLTQNDFACTC-------EHQSFLQWIKDQRQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp ----------SSCCCCCTTCCEEECTTCCEECSG-------GGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTC
T ss_pred ----------HHHHhhhccCCEEEccCCCeeccc-------ChHHHHHHHHhhhhhhccccccccCCchhhCCc
Confidence 223344 36778888888777421 111111223344455556666666666655543
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=4e-31 Score=321.03 Aligned_cols=132 Identities=17% Similarity=0.175 Sum_probs=61.6
Q ss_pred CCCCCCeEeCCcccccccchhhhhcCCCC-CcEEEccCCc-CCc-cCcccccCCCCCcEEEccCCccccc----cCcccc
Q 048205 96 NLSSLSNLDLSVNNLTGELLANICSNLPL-LQTLFLDENN-FDG-KIPSTLLRCKHLQTLSLSINDFSGD----IPKEIG 168 (1027)
Q Consensus 96 ~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~-L~~L~L~~N~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~ 168 (1027)
.+++|++|+|++|.+++.....+...++. |++|+|++|. +.. .++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 34455555555554443222222222223 5555555443 110 0111223455555555555555433 222334
Q ss_pred CCCCCcEEEccCccCCCC----CChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccC
Q 048205 169 NLTKLKYLHLDQNRLQGE----IPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSF 228 (1027)
Q Consensus 169 ~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 228 (1027)
.+++|++|++++|.+++. ++..+..+++|++|++++|.+.+ +|..+.++++|+.|+++.
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 455556666665555421 22233455666666666666653 445555666666666654
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=7.7e-29 Score=275.98 Aligned_cols=234 Identities=22% Similarity=0.266 Sum_probs=143.8
Q ss_pred CCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCcccccccccccccc
Q 048205 364 PNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLE 443 (1027)
Q Consensus 364 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~ 443 (1027)
+++++|+|++|+++ .+|..++++++|++|+|++|.++ .+|..|+.+++|++|+|++|+++.+|..+ ..+++|+
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l-----~~l~~L~ 153 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALPASI-----ASLNRLR 153 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCCGGG-----GGCTTCC
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCcHHH-----hcCcCCC
Confidence 56777777777776 56666777777777777777777 56777777777777777777777665543 3556677
Q ss_pred EeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCc
Q 048205 444 YFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDN 523 (1027)
Q Consensus 444 ~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 523 (1027)
+|++++|++.+..|..++.. .++..++.+++|++|+|++|+++ .+|..++++++|++|+|++|
T Consensus 154 ~L~L~~n~~~~~~p~~~~~~----------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N 216 (328)
T 4fcg_A 154 ELSIRACPELTELPEPLAST----------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNS 216 (328)
T ss_dssp EEEEEEETTCCCCCSCSEEE----------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESS
T ss_pred EEECCCCCCccccChhHhhc----------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCC
Confidence 77777666555544433221 12233444555555555555555 44444555555555555555
Q ss_pred eeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEE
Q 048205 524 QLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYL 603 (1027)
Q Consensus 524 ~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L 603 (1027)
+ +++ +|..++.+++|+.|++++|++.+.+|..++++++|++|
T Consensus 217 ~-------------------------------------l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L 258 (328)
T 4fcg_A 217 P-------------------------------------LSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRL 258 (328)
T ss_dssp C-------------------------------------CCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEE
T ss_pred C-------------------------------------CCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEE
Confidence 4 443 44455556666666666666666666666666666666
Q ss_pred EccCCccccCccccccccccccccccccccccCCchhhhhcccCCcceeccCCCCC
Q 048205 604 FLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 604 ~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~ 659 (1027)
+|++|++.+.+|..++.+++|++|+|++|++.|.+|..++++++|+.+++..|.+.
T Consensus 259 ~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 259 ILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 66666666666666666666666666666666666666666666666666655443
No 302
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=283.98 Aligned_cols=286 Identities=22% Similarity=0.202 Sum_probs=211.7
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLS 101 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 101 (1027)
-..++.....+++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|.+++..|..|.++++|+
T Consensus 27 ~~~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLE 103 (353)
T ss_dssp CCEECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCC
Confidence 345677778999999998 7888776 5899999999999977777899999999999999999988788899999999
Q ss_pred eEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCc-ccccCCCCCcEEEccCC-ccccccCccccCCCCCcEEEcc
Q 048205 102 NLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIP-STLLRCKHLQTLSLSIN-DFSGDIPKEIGNLTKLKYLHLD 179 (1027)
Q Consensus 102 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~ 179 (1027)
+|++++|+++ .++...+..+++|++|++++|++++..+ ..|..+++|++|++++| .+....+..|.++++|++|+++
T Consensus 104 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~ 182 (353)
T 2z80_A 104 HLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEID 182 (353)
T ss_dssp EEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEE
T ss_pred EEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECC
Confidence 9999999998 5777778899999999999999996655 58899999999999999 5776677889999999999999
Q ss_pred CccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCcc
Q 048205 180 QNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPF 259 (1027)
Q Consensus 180 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~ 259 (1027)
+|++++..|..+..+++|++|++++|.++...+..+..+++|+.|++++|++++..+..+. .....+.
T Consensus 183 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~------------~~~~~~~ 250 (353)
T 2z80_A 183 ASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELS------------TGETNSL 250 (353)
T ss_dssp ETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------------------CCCC
T ss_pred CCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccc------------cccccch
Confidence 9999988899999999999999999999743333445689999999999999854333221 0112344
Q ss_pred ccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccc
Q 048205 260 LEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLV 328 (1027)
Q Consensus 260 L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 328 (1027)
++.+++++|.+++.- ...+|..+..+++|+.|++++|+++.+.+..|..+++|++|++++|++.
T Consensus 251 l~~l~L~~~~l~~~~-----l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 251 IKKFTFRNVKITDES-----LFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp CCEEEEESCBCCHHH-----HHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred hhccccccccccCcc-----hhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCcc
Confidence 555555555554210 0023334444555555555555555333333344444444444444444
No 303
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=7.6e-29 Score=276.02 Aligned_cols=216 Identities=20% Similarity=0.280 Sum_probs=173.4
Q ss_pred CCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccc
Q 048205 387 TSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQS 466 (1027)
Q Consensus 387 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~ 466 (1027)
..+++.|+|++|.++ .+|..+..+++|++|+|++|.++.+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~~l--------------------------------------- 119 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLMEL--------------------------------------- 119 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCCCC---------------------------------------
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCccch---------------------------------------
Confidence 466777788887777 4566677777777777777775543
Q ss_pred cceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccc
Q 048205 467 MEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTL 546 (1027)
Q Consensus 467 l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l 546 (1027)
|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+.. ..++..+
T Consensus 120 ---------------p~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~----~~~~~~~ 179 (328)
T 4fcg_A 120 ---------------PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS----TDASGEH 179 (328)
T ss_dssp ---------------CSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE----EC-CCCE
T ss_pred ---------------hHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh----ccchhhh
Confidence 444555556666666666666 55666666677777777776665555544321 1233456
Q ss_pred cccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccc
Q 048205 547 WNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKS 626 (1027)
Q Consensus 547 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~ 626 (1027)
.++++|++|+|++|.++ .+|..++.+++|++|++++|++++ +|..++.+++|++|+|++|++.+.+|..++.+++|+.
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~ 257 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKR 257 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCE
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCE
Confidence 67899999999999999 799999999999999999999995 7888999999999999999999999999999999999
Q ss_pred cccccccccCCchhhhhcccCCcceeccCCCCCCCCCC
Q 048205 627 LNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 627 L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~ 664 (1027)
|+|++|++.+.+|..+..+++|+.|++++|++.|.+|.
T Consensus 258 L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~ 295 (328)
T 4fcg_A 258 LILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPS 295 (328)
T ss_dssp EECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCG
T ss_pred EECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccH
Confidence 99999999999999999999999999999999999997
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.1e-30 Score=317.05 Aligned_cols=379 Identities=13% Similarity=0.088 Sum_probs=161.9
Q ss_pred ccCCCcEEEccccccceeCcccccCC--CCCCEEEccCcc-cCC-ccCccccCCCCCCeEeCCcccccccc---hhhhhc
Q 048205 48 NVTTLIGLHLRGNKLQGEIPEELGNL--AELEELWLQNNF-LTG-TIPSSIFNLSSLSNLDLSVNNLTGEL---LANICS 120 (1027)
Q Consensus 48 ~l~~L~~L~L~~n~i~~~~p~~l~~l--~~L~~L~L~~N~-l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~---~~~~~~ 120 (1027)
.+++|++|+|++|.+++..+..+... .+|++|+|++|. ++. .++.....+++|++|+|++|.+++.. ....+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 34555555555555544444444332 225555555544 110 01111224455555555555543221 222334
Q ss_pred CCCCCcEEEccCCcCCc----cCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCC---CCCChhccC
Q 048205 121 NLPLLQTLFLDENNFDG----KIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQ---GEIPEELGN 193 (1027)
Q Consensus 121 ~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~ 193 (1027)
.+++|++|++++|.+++ .++..+..+++|++|++++|.+.+ +|..+..+++|++|+++.+... ...+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 45555555555555542 222233445555555555555543 3444555555555555432211 112233444
Q ss_pred CCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEecccccccc
Q 048205 194 LAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGE 273 (1027)
Q Consensus 194 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 273 (1027)
+++|+.|+++++... .+|..+..+++|++|+|++|.+++. .....+..+++|++|+++ |.+...
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~--------------~~~~~~~~~~~L~~L~L~-~~~~~~ 332 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETE--------------DHCTLIQKCPNLEVLETR-NVIGDR 332 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHH--------------HHHHHHTTCTTCCEEEEE-GGGHHH
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHH--------------HHHHHHHhCcCCCEEecc-CccCHH
Confidence 455555555544322 3444444555555555555554310 001122344555555555 222211
Q ss_pred CCCCCCCCCCCccccCcCCccceecc-----------CccccccCCc-cccCcCcccceeccCcccccccCccccc-cCC
Q 048205 274 IPSDLGNCTIPKEIGNLAKLEKLDLQ-----------FNRLQCVIPH-EIDNLHNLEWMIFSFNKLVGVVPTTIFN-VST 340 (1027)
Q Consensus 274 ~p~~~~~~~~p~~l~~l~~L~~L~L~-----------~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~ 340 (1027)
.++..+..+++|++|+++ .|.++..... .+..+++|++|+++.|++++..+..+.. +++
T Consensus 333 --------~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~ 404 (592)
T 3ogk_B 333 --------GLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKN 404 (592)
T ss_dssp --------HHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCS
T ss_pred --------HHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCC
Confidence 111122334455555555 2344322111 1233455555555555555444444433 555
Q ss_pred cceEEcc----CccccccCCCC-----ccCCCCCccEEEcccc--ccCCcCccccc-CCCCCCeeecCCCcccC-CCCcc
Q 048205 341 LKFLYLG----SNSFFGRLPSS-----ADVRLPNLEELSLSGN--NFSGTIPSFIF-NTSKLSTLELQRNSFSG-FIPNT 407 (1027)
Q Consensus 341 L~~L~L~----~N~l~~~~~~~-----~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~~p~~ 407 (1027)
|+.|+++ .|.+++. |.. ....+++|++|+|++| .+++..+..+. .+++|++|++++|++++ .++..
T Consensus 405 L~~L~l~~~~~~n~l~~~-p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~ 483 (592)
T 3ogk_B 405 LCDFRLVLLDREERITDL-PLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEF 483 (592)
T ss_dssp CCEEEEEECSCCSCCSSC-CCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHH
T ss_pred CcEEEEeecCCCccccCc-hHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHH
Confidence 5555553 3333221 100 0123455555555432 23333333332 24555555555555543 12333
Q ss_pred cCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCC
Q 048205 408 FGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGI 455 (1027)
Q Consensus 408 ~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~ 455 (1027)
+.++++|++|+|++|.++... +. .....+++|++|+|++|++++.
T Consensus 484 ~~~~~~L~~L~l~~n~l~~~~--~~-~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 484 SRGCPNLQKLEMRGCCFSERA--IA-AAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HTCCTTCCEEEEESCCCBHHH--HH-HHHHHCSSCCEEEEESCBCCTT
T ss_pred HhcCcccCeeeccCCCCcHHH--HH-HHHHhcCccCeeECcCCcCCHH
Confidence 445555555555555543210 00 0012345555555555555543
No 305
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=278.60 Aligned_cols=281 Identities=20% Similarity=0.205 Sum_probs=170.4
Q ss_pred CCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEE
Q 048205 97 LSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYL 176 (1027)
Q Consensus 97 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 176 (1027)
++.....++++|.++ .+|..++ ++|++|++++|++++..+..|.++++|++|++++|.+++..|..|.++++|++|
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 344455677777766 4444332 356666666666665555566666666666666666665555566666666666
Q ss_pred EccCccCCCCCChhccCCCCCCeeeccccccCCCCC-ccccCCCCCCEEEccCcc-CCCCCCcchhhhhhccccCCcccc
Q 048205 177 HLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIP-PSIFNLSSLSDLELSFNS-LTGNFPKDMHIVNRLSAELPAKFC 254 (1027)
Q Consensus 177 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~~~~~~~~l~~~~~ 254 (1027)
+|++|++++..+..|+.+++|++|++++|++++..+ ..|..+++|++|++++|. ++ .++.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~---------------~~~~--- 167 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFT---------------KIQR--- 167 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCC---------------EECT---
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccc---------------ccCH---
Confidence 666666664433446666666666666666663222 245556666666666653 32 1222
Q ss_pred CCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCcc
Q 048205 255 NNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTT 334 (1027)
Q Consensus 255 ~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 334 (1027)
..+..+++|++|++++|++++..|..|..+++|++|++++|++..+.+..
T Consensus 168 ------------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 217 (353)
T 2z80_A 168 ------------------------------KDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIF 217 (353)
T ss_dssp ------------------------------TTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHH
T ss_pred ------------------------------HHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhh
Confidence 23444555555555555555555556666666666666666665444444
Q ss_pred ccccCCcceEEccCccccccCCCCc--cCCCCCccEEEccccccCC----cCcccccCCCCCCeeecCCCcccCCCCccc
Q 048205 335 IFNVSTLKFLYLGSNSFFGRLPSSA--DVRLPNLEELSLSGNNFSG----TIPSFIFNTSKLSTLELQRNSFSGFIPNTF 408 (1027)
Q Consensus 335 ~~~l~~L~~L~L~~N~l~~~~~~~~--~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 408 (1027)
+..+++|++|++++|++.+..+... ....+.++.++|+++.+++ .+|..+.++++|++|+|++|+++.+.+..|
T Consensus 218 ~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~ 297 (353)
T 2z80_A 218 VDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIF 297 (353)
T ss_dssp HHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTT
T ss_pred hhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHH
Confidence 4456666666666666643322211 1134567777777777765 467778888888888888888886555556
Q ss_pred CCcccccEEecCCCCCCCCCC
Q 048205 409 GNLRNLKWLDLGDNYLTSSTS 429 (1027)
Q Consensus 409 ~~l~~L~~L~L~~N~l~~~~~ 429 (1027)
+.+++|++|+|++|++++.+.
T Consensus 298 ~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 298 DRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEEeeCCCccCcCC
Confidence 888888888888888775443
No 306
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=3.8e-28 Score=268.51 Aligned_cols=249 Identities=25% Similarity=0.294 Sum_probs=182.0
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCc--cCccccCCCCCCeEeCC
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGT--IPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~l~~l~~L~~L~Ls 106 (1027)
+.++++++.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++.. .+..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888888 6777654 6888888888888854445578888888888888888733 25667778888888888
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCc-ccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIP-STLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
+|.++ .++.. +..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..+..|..+++|++|++++|++++
T Consensus 87 ~n~i~-~l~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEE-EETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCccc-cChhh-cCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 88887 34333 5677888888888888876655 577788888888888888877777778888888888888888775
Q ss_pred -CCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEE
Q 048205 186 -EIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIY 264 (1027)
Q Consensus 186 -~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~ 264 (1027)
..|..+..+++|++|++++|++++..|..|..+++|++|++++|+++ .++...+..+++|+.|+
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---------------~~~~~~~~~l~~L~~L~ 229 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF---------------SLDTFPYKCLNSLQVLD 229 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS---------------BCCSGGGTTCTTCCEEE
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC---------------ccChhhccCcccCCEeE
Confidence 46777788888888888888887766777778888888888888776 33333455666677777
Q ss_pred eccccccccCCCCCCCCCCCccccCc-CCccceeccCcccccc
Q 048205 265 LSKNMFYGEIPSDLGNCTIPKEIGNL-AKLEKLDLQFNRLQCV 306 (1027)
Q Consensus 265 Ls~N~l~~~~p~~~~~~~~p~~l~~l-~~L~~L~L~~N~l~~~ 306 (1027)
+++|++++..| ..+..+ ++|++|+|++|++++.
T Consensus 230 L~~N~l~~~~~---------~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 230 YSLNHIMTSKK---------QELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTSCCCBCSS---------SSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCCCcccCH---------HHHHhhhccCCEEEccCCCeecc
Confidence 77777765333 233444 3666666666666543
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=6.7e-28 Score=263.49 Aligned_cols=255 Identities=24% Similarity=0.284 Sum_probs=126.1
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
++++++++.++ .+|..+ .++|++|+|++|++++..+..|..+++|++|++++|.+++..|..|..+++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 34444444444 334332 234455555555554444444445555555555555554444444555555555555555
Q ss_pred c-ccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 109 N-LTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 109 ~-l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
+ ++ .+....+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|+.+++|++|+|++|++++..
T Consensus 91 ~~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLR-SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCcc-ccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 4 33 333334444455555555555555444555555555555555555555444444555555555555555555444
Q ss_pred ChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEecc
Q 048205 188 PEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSK 267 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~ 267 (1027)
+..|..+++|++|++++|.+++..|..|..+++|+.|++++|+++ .++...+..+++|+.|++++
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---------------~~~~~~~~~l~~L~~L~l~~ 234 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLS---------------ALPTEALAPLRALQYLRLND 234 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS---------------CCCHHHHTTCTTCCEEECCS
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCC---------------cCCHHHcccCcccCEEeccC
Confidence 444555555555555555555555555555555555555555554 22333344455555555555
Q ss_pred ccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCcccc
Q 048205 268 NMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEID 312 (1027)
Q Consensus 268 N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 312 (1027)
|.+.+..+ .. .-...++.+..+.+.+.+..|..+.
T Consensus 235 N~~~c~~~-------~~---~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 235 NPWVCDCR-------AR---PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp SCEECSGG-------GH---HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred CCccCCCC-------cH---HHHHHHHhcccccCccccCCchHhC
Confidence 55543211 00 0112344445556666665555544
No 308
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.6e-27 Score=285.22 Aligned_cols=268 Identities=24% Similarity=0.240 Sum_probs=176.0
Q ss_pred CccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEc
Q 048205 292 KLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSL 371 (1027)
Q Consensus 292 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 371 (1027)
+++.|++++|.++. +|..+. ++|+.|++++|+|+.+.+ .+++|++|+|++|++. .+|. .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~~-lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~-~lp~----~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLTT-LPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLT-SLPV----LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCSC-CCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCS-CCCC----CCTTCCEEEE
T ss_pred CCcEEEecCCCcCc-cChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCC-cCCC----CCCCCCEEEC
Confidence 57777777777773 344443 567777777777665433 3566666666666664 3444 3456666666
Q ss_pred cccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCC
Q 048205 372 SGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNP 451 (1027)
Q Consensus 372 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~ 451 (1027)
++|++++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|+|+.+|.. +++|+.|++++|.
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~--------~~~L~~L~L~~N~ 172 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPAL--------PSELCKLWAYNNQ 172 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCC--------CTTCCEEECCSSC
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCc--------cCCCCEEECCCCC
Confidence 6666653 333 34556666666666654 2332 35566666666665554431 2345555555555
Q ss_pred CCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCC
Q 048205 452 LGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPD 531 (1027)
Q Consensus 452 l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~ 531 (1027)
|++ +| ..+++|+.|++++|++++ +|. .+++|+.|++++|+++
T Consensus 173 l~~--------------------------l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~----- 214 (622)
T 3g06_A 173 LTS--------------------------LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLT----- 214 (622)
T ss_dssp CSC--------------------------CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-----
T ss_pred CCC--------------------------Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEECcCCccc-----
Confidence 543 33 334667777777777775 332 2467888888888774
Q ss_pred CCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccc
Q 048205 532 NLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQ 611 (1027)
Q Consensus 532 ~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~ 611 (1027)
.+|.. +++|+.|+|++|.+++ +| ..+++|+.|++++|+|+ .+|. .+++|+.|+|++|+|+
T Consensus 215 ---------~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 215 ---------SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT 274 (622)
T ss_dssp ---------SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC
T ss_pred ---------ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC
Confidence 23322 3678888888888886 66 45678888888888887 4676 5678888888888888
Q ss_pred cCccccccccccccccccccccccCCchhhhhccc
Q 048205 612 GSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLL 646 (1027)
Q Consensus 612 g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 646 (1027)
.||..++.+++|+.|+|++|+++|.+|..+..++
T Consensus 275 -~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 275 -RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp -SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred -cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 7888888888888889998888888888888776
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.2e-29 Score=295.83 Aligned_cols=236 Identities=23% Similarity=0.242 Sum_probs=160.5
Q ss_pred CCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccc
Q 048205 363 LPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYL 442 (1027)
Q Consensus 363 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L 442 (1027)
+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |+.+++|++|+|++|.|++++. .++|
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~---------~~~L 101 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV---------GPSI 101 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE---------CTTC
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC---------CCCc
Confidence 3467777777777776666677777777777777777776554 7777777777777777665432 2567
Q ss_pred cEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccC
Q 048205 443 EYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKD 522 (1027)
Q Consensus 443 ~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 522 (1027)
++|++++|.|+++++.. +++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 102 ~~L~L~~N~l~~~~~~~----------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (487)
T 3oja_A 102 ETLHAANNNISRVSCSR----------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (487)
T ss_dssp CEEECCSSCCCCEEECC----------------------------CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTT
T ss_pred CEEECcCCcCCCCCccc----------------------------cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCC
Confidence 77777777766544322 23455555555555555555566666666666666
Q ss_pred ceeecccCCCCCccccccccCcccc-ccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCcccc
Q 048205 523 NQLEGSIPDNLSFSCTLTSIPSTLW-NLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQ 601 (1027)
Q Consensus 523 N~l~g~~p~~~~~~~~~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~ 601 (1027)
|++++.+ |..+. .+++|+.|+|++|.+++. |. +..+++|+.|+|++|++++ +|..++.+++|+
T Consensus 154 N~l~~~~-------------~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~ 217 (487)
T 3oja_A 154 NEIDTVN-------------FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVT 217 (487)
T ss_dssp SCCCEEE-------------GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCS
T ss_pred CCCCCcC-------------hHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCcc
Confidence 6654332 22333 455666666666666653 22 3357788888888888885 555688888888
Q ss_pred EEEccCCccccCcccccccccccccccccccccc-CCchhhhhcccCCcceecc
Q 048205 602 YLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLF-GIIPISLEKLLDLKDINVS 654 (1027)
Q Consensus 602 ~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~l~l~ 654 (1027)
.|+|++|.|++ +|..++.+++|+.|+|++|+++ +.+|..+..++.|+.++++
T Consensus 218 ~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 218 WISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp EEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred EEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 88888888884 7888888888888888888887 7788888888888887775
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.3e-27 Score=274.80 Aligned_cols=249 Identities=25% Similarity=0.303 Sum_probs=161.9
Q ss_pred CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCC
Q 048205 27 RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 106 (1027)
+.+.++++++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3456666666666 5666554 566667777777766666666677777777777777666555666667777777777
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccC-CccccccCccccCCCCCcEEEccCccCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSI-NDFSGDIPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
+|+++ .++...+..+++|++|+|++|+++...+..|..+++|++|+|++ |.+....+..|.++++|++|+|++|+++.
T Consensus 121 ~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 121 DNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp SSCCS-SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCcCC-eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 77666 45555666666777777777777666666667777777777776 34443344456667777777777777763
Q ss_pred CCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEe
Q 048205 186 EIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYL 265 (1027)
Q Consensus 186 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~L 265 (1027)
+| .+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+++ .++...|..+++|+.|+|
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~---------------~~~~~~~~~l~~L~~L~L 262 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ---------------VIERNAFDNLQSLVEINL 262 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC---------------EECTTSSTTCTTCCEEEC
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCcee---------------EEChhhhcCCCCCCEEEC
Confidence 33 3666677777777777777666666777777777777777765 334445566667777777
Q ss_pred ccccccccCCCCCCCCCCCccccCcCCccceeccCccccc
Q 048205 266 SKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQC 305 (1027)
Q Consensus 266 s~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 305 (1027)
++|++++.. +..+..+++|+.|+|++|.+.+
T Consensus 263 ~~N~l~~~~---------~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 263 AHNNLTLLP---------HDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp TTSCCCCCC---------TTTTSSCTTCCEEECCSSCEEC
T ss_pred CCCCCCccC---------hhHhccccCCCEEEcCCCCccC
Confidence 777776311 2234556777777777777765
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.3e-27 Score=275.91 Aligned_cols=248 Identities=24% Similarity=0.278 Sum_probs=156.0
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
.+.++++++.++ .+|..+. +++++|+|++|+|++..|+.|.++++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 132 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFD 132 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCC
Confidence 456666666666 5565554 5666666666666666666666666666666666666665566666666666666666
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccC-CccccccCccccCCCCCcEEEccCccCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSI-NDFSGDIPKEIGNLTKLKYLHLDQNRLQGE 186 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 186 (1027)
|+++ .++...+..+++|++|+|++|+++...+..|..+++|++|++++ |.+....+..|.++++|++|+|++|++++.
T Consensus 133 n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 133 NWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SCCS-BCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CcCC-ccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 6665 45555566666666666666666666666666666666666666 344433344566666666666666666643
Q ss_pred CChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEec
Q 048205 187 IPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLS 266 (1027)
Q Consensus 187 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls 266 (1027)
| .+..+++|++|+|++|.|++..|..|.++++|+.|+|++|+++ .++...+..+++|+.|+|+
T Consensus 212 -~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~---------------~~~~~~~~~l~~L~~L~L~ 274 (452)
T 3zyi_A 212 -P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVS---------------LIERNAFDGLASLVELNLA 274 (452)
T ss_dssp -C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCC---------------EECTTTTTTCTTCCEEECC
T ss_pred -c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCc---------------eECHHHhcCCCCCCEEECC
Confidence 3 3566666666666666666666666666666667777666665 2333445566666677777
Q ss_pred cccccccCCCCCCCCCCCccccCcCCccceeccCccccc
Q 048205 267 KNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQC 305 (1027)
Q Consensus 267 ~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 305 (1027)
+|+|++.. +..+..+++|+.|+|++|.+.+
T Consensus 275 ~N~l~~~~---------~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 275 HNNLSSLP---------HDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp SSCCSCCC---------TTSSTTCTTCCEEECCSSCEEC
T ss_pred CCcCCccC---------hHHhccccCCCEEEccCCCcCC
Confidence 77666311 1234556677777777777664
No 312
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.9e-27 Score=259.95 Aligned_cols=225 Identities=25% Similarity=0.234 Sum_probs=207.3
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
++++.+++.++ .+|..+ .++|++|+|++|.+++..+..++.+++|++|+|++|++++..|..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67899999998 566544 479999999999999877788999999999999999999888999999999999999999
Q ss_pred c-cCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccccc
Q 048205 85 F-LTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDI 163 (1027)
Q Consensus 85 ~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (1027)
. ++...|..|..+++|++|++++|+++ .++...+..+++|++|++++|++++..+..|..+++|++|+|++|.+++..
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCC-EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccC
Confidence 7 88777899999999999999999998 456677889999999999999999888888999999999999999999777
Q ss_pred CccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCC
Q 048205 164 PKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTG 233 (1027)
Q Consensus 164 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 233 (1027)
+..|..+++|++|+|++|++++..|..|..+++|++|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 170 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 170 ERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred HHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 7789999999999999999998889999999999999999999998777789999999999999999974
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.9e-29 Score=278.54 Aligned_cols=246 Identities=24% Similarity=0.252 Sum_probs=158.7
Q ss_pred CCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccc
Q 048205 363 LPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYL 442 (1027)
Q Consensus 363 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L 442 (1027)
+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ |..+++|++|+|++|+|++++ .++.|
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~---------~~~~L 101 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL---------VGPSI 101 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE---------ECTTC
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc---------CCCCc
Confidence 4456666666666665555566666666666666666665433 666666666666666655433 12456
Q ss_pred cEeeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccC
Q 048205 443 EYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKD 522 (1027)
Q Consensus 443 ~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 522 (1027)
++|++++|+++++++.. +++|++|++++|++++..+..++.+++|++|+|++
T Consensus 102 ~~L~l~~n~l~~~~~~~----------------------------~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 102 ETLHAANNNISRVSCSR----------------------------GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp CEEECCSSCCSEEEECC----------------------------CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred CEEECCCCccCCcCccc----------------------------cCCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 66666666665433221 23455555555555555555556666666666666
Q ss_pred ceeecccCCCCCccccccccCccc-cccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCcccc
Q 048205 523 NQLEGSIPDNLSFSCTLTSIPSTL-WNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQ 601 (1027)
Q Consensus 523 N~l~g~~p~~~~~~~~~~~~p~~l-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~ 601 (1027)
|++++.. |..+ ..+++|++|+|++|.+++. |. ...+++|++|+|++|++++ +|..++.+++|+
T Consensus 154 N~l~~~~-------------~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~ 217 (317)
T 3o53_A 154 NEIDTVN-------------FAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVT 217 (317)
T ss_dssp SCCCEEE-------------GGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCS
T ss_pred CCCCccc-------------HHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-chhhhcccCccc
Confidence 6654321 1222 2455666666666666643 32 2347788888888888874 566688888888
Q ss_pred EEEccCCccccCcccccccccccccccccccccc-CCchhhhhcccCCcceecc-CCCCCCCCCC
Q 048205 602 YLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLF-GIIPISLEKLLDLKDINVS-FNKLEGEIPR 664 (1027)
Q Consensus 602 ~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~l~l~-~N~l~g~~p~ 664 (1027)
+|+|++|+++ .+|..++.+++|+.|+|++|+++ +.+|..+..++.|+.++++ .+.++|..|.
T Consensus 218 ~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 218 WISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp EEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred EEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 8888888888 57888888888888888888888 7788888888888888888 5567777665
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3e-28 Score=269.73 Aligned_cols=133 Identities=19% Similarity=0.208 Sum_probs=80.2
Q ss_pred ccCcCCccceeccCccccccCCccccCcCcccceeccCccccc-ccCcccc-------ccCCcceEEccCccccccCCCC
Q 048205 287 IGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVG-VVPTTIF-------NVSTLKFLYLGSNSFFGRLPSS 358 (1027)
Q Consensus 287 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~ 358 (1027)
++..++|+.|++++|.+ .+|..+... |+.|++++|++.. ..|..+. ++++|++|+|++|++.+.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34456677777777777 455555443 7777777777743 3343333 4666666666666666566655
Q ss_pred cc-CCCCCccEEEccccccCCcCcccccCC-----CCCCeeecCCCcccCCCCcccCCcccccEEecCCCCC
Q 048205 359 AD-VRLPNLEELSLSGNNFSGTIPSFIFNT-----SKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYL 424 (1027)
Q Consensus 359 ~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 424 (1027)
++ ..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|+|++|++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 185 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPE 185 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTT
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCc
Confidence 42 4566666666666666654 5555555 5666666666666655556666666666666665553
No 315
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.5e-27 Score=271.98 Aligned_cols=249 Identities=22% Similarity=0.273 Sum_probs=227.9
Q ss_pred CCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEcc
Q 048205 3 NLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQ 82 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 82 (1027)
+.+.++.++++++ .+|..+. +++++|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3467888999998 5776654 789999999999998889999999999999999999998888999999999999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccC-CcCCccCcccccCCCCCcEEEccCCcccc
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDE-NNFDGKIPSTLLRCKHLQTLSLSINDFSG 161 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 161 (1027)
+|++++..+..|..+++|++|+|++|+++ .++...|..+++|++|++++ |.+....+..|.++++|++|+|++|.+++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999777778999999999999999998 67888899999999999999 66776667789999999999999999985
Q ss_pred ccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhh
Q 048205 162 DIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHI 241 (1027)
Q Consensus 162 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 241 (1027)
+| .+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|+|+
T Consensus 211 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--------- 279 (452)
T 3zyi_A 211 -MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLS--------- 279 (452)
T ss_dssp -CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS---------
T ss_pred -cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCC---------
Confidence 44 5889999999999999999988999999999999999999999888999999999999999999998
Q ss_pred hhhccccCCccccCCCccccEEEeccccccc
Q 048205 242 VNRLSAELPAKFCNNIPFLEEIYLSKNMFYG 272 (1027)
Q Consensus 242 ~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 272 (1027)
.++...+..+++|+.|+|++|.+..
T Consensus 280 ------~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 280 ------SLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ------CCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred ------ccChHHhccccCCCEEEccCCCcCC
Confidence 5667778889999999999999995
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2e-28 Score=271.85 Aligned_cols=257 Identities=23% Similarity=0.242 Sum_probs=143.5
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
++.++++.+.+....+..+..+++|++|+|++|++++..|..|..+++|++|+|++|.+++..+ +..+++|++|++++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4445555555553333444445566666666666665555566666666666666666654333 66666666666666
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
|++++ ++ ..++|++|++++|++++..+.. +++|++|++++|.+++..+..|..+++|++|+|++|++++..
T Consensus 90 n~l~~-l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 90 NYVQE-LL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SEEEE-EE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred Ccccc-cc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 66652 11 2255666666666665444332 455666666666666555556666666666666666666554
Q ss_pred Chhc-cCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEec
Q 048205 188 PEEL-GNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLS 266 (1027)
Q Consensus 188 p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls 266 (1027)
+..+ ..+++|++|+|++|.|++. + ....+++|++|+|++|+++ .+|.. +..+++|++|+++
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~---------------~l~~~-~~~l~~L~~L~L~ 222 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA---------------FMGPE-FQSAAGVTWISLR 222 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC---------------EECGG-GGGGTTCSEEECT
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC---------------cchhh-hcccCcccEEECc
Confidence 5444 3556666666666666533 2 2223566666666666665 22222 2344555555555
Q ss_pred cccccccCCCCCCCCCCCccccCcCCccceeccCcccc-ccCCccccCcCcccceecc
Q 048205 267 KNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQ-CVIPHEIDNLHNLEWMIFS 323 (1027)
Q Consensus 267 ~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls 323 (1027)
+|+++ .+|..+..+++|+.|++++|++. +..+..+..+++|+.|+++
T Consensus 223 ~N~l~----------~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 223 NNKLV----------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TSCCC----------EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCccc----------chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 55554 33444455556666666666665 3444555555555555555
No 317
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.1e-28 Score=293.52 Aligned_cols=185 Identities=19% Similarity=0.093 Sum_probs=131.9
Q ss_pred eeeccccceEEEEE-ecCCceEEEEEEeccc----------chhHHHHHHHHHHHhhc-cCCccceEEeEEecCCeeEEE
Q 048205 757 LIGRGGFGFVYKAR-IQDGMEVAVKVFDLQY----------GRAIKSFDIECGMIKRI-RHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 757 ~lG~G~~g~V~~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lV 824 (1027)
..+.|+.|.+..++ ...|+.||||++.+.. ....+.+.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35677777777665 3368999999997542 12346789999999999 699999999999999999999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||++|++|.+++.+.. .++.. +|+.||++||+|+| ++|||||||||+|||++.+|.+||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999998754 35543 58999999999999 9999999999999999999999999999998654322
Q ss_pred CcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC
Q 048205 905 QSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKP 951 (1027)
Q Consensus 905 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p 951 (1027)
......+||++|||||++.+ .+..++|+||+|++++++.++..+
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 23345689999999999875 467789999999998887766544
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.6e-28 Score=270.16 Aligned_cols=205 Identities=22% Similarity=0.229 Sum_probs=125.3
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccc-eeCccccc-------CCCCCCEEEccCcccCCccCcc
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQ-GEIPEELG-------NLAELEELWLQNNFLTGTIPSS 93 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~-~~~p~~l~-------~l~~L~~L~L~~N~l~~~~p~~ 93 (1027)
+...++|++|++++|.+ .+|..+... |++|+|++|+++ ..+|..+. ++++|++|+|++|++++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 34456677777777777 567666644 777777777773 45565554 6777777777777777767766
Q ss_pred c--cCCCCCCeEeCCcccccccchhhhhcCC-----CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc--cC
Q 048205 94 I--FNLSSLSNLDLSVNNLTGELLANICSNL-----PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD--IP 164 (1027)
Q Consensus 94 l--~~l~~L~~L~Ls~N~l~~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p 164 (1027)
+ ..+++|++|+|++|++++. + ..+..+ ++|++|+|++|++++..+..|..+++|++|+|++|++.+. .|
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~-~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-D-AWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-S-SHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-h-HHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 5 6777777777777777643 2 333333 6666666666666666666666666666666666665543 22
Q ss_pred ccc--cCCCCCcEEEccCccCCCC---CChhccCCCCCCeeeccccccCCCCC-ccccCCCCCCEEEccCccCC
Q 048205 165 KEI--GNLTKLKYLHLDQNRLQGE---IPEELGNLAELEKLQLQNNFLTGTIP-PSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 165 ~~~--~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
..+ ..+++|++|+|++|++++. ....+..+++|++|+|++|++++..| ..+..+++|++|+|++|+|+
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 266 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK 266 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC
Confidence 233 5566666666666666521 11233455566666666666655443 23444555555555555554
No 319
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1.6e-26 Score=269.08 Aligned_cols=249 Identities=24% Similarity=0.285 Sum_probs=228.0
Q ss_pred CCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEcc
Q 048205 3 NLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQ 82 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 82 (1027)
..+.++.++++++ .+|..+. ++++.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 3568899999998 6777665 789999999999998888999999999999999999998888999999999999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccC-CcCCccCcccccCCCCCcEEEccCCcccc
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDE-NNFDGKIPSTLLRCKHLQTLSLSINDFSG 161 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 161 (1027)
+|++++..+..|..+++|++|+|++|+++ .++...|..+++|++|+|++ |.+....+..|.++++|++|+|++|.++
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCccc-ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999777778999999999999999998 67788899999999999999 5666666778999999999999999998
Q ss_pred ccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhh
Q 048205 162 DIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHI 241 (1027)
Q Consensus 162 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 241 (1027)
.+| .+..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++|+|+
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~--------- 268 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT--------- 268 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC---------
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC---------
Confidence 455 5889999999999999999888999999999999999999999988999999999999999999998
Q ss_pred hhhccccCCccccCCCccccEEEeccccccc
Q 048205 242 VNRLSAELPAKFCNNIPFLEEIYLSKNMFYG 272 (1027)
Q Consensus 242 ~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 272 (1027)
.++...+..+++|+.|+|++|.+..
T Consensus 269 ------~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 269 ------LLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp ------CCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred ------ccChhHhccccCCCEEEcCCCCccC
Confidence 5667778889999999999999994
No 320
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.6e-26 Score=271.88 Aligned_cols=261 Identities=26% Similarity=0.273 Sum_probs=129.1
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|++|++++
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECS
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcC
Confidence 444444444444 3444333 44444444444444 2333 2344444444444444 2232 334444555555
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
|++++ ++. .+++|++|++++|+++++ |.. +++|++|+|++|.+++ +|. .+.+|+.|++++|++++ +
T Consensus 111 N~l~~-l~~----~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 111 NPLTH-LPA----LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp CCCCC-CCC----CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CcCCC-CCC----CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-C
Confidence 54442 211 334455555555555432 221 2555555555555552 232 23455555555555553 3
Q ss_pred ChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEecc
Q 048205 188 PEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSK 267 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~ 267 (1027)
| ..+++|+.|++++|.|++ +|.. +++|+.|++++|.++ .+|. .+++|+.|++++
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~---------------~l~~----~~~~L~~L~Ls~ 230 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT---------------SLPA----LPSGLKELIVSG 230 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS---------------SCCC----CCTTCCEEECCS
T ss_pred c---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc---------------ccCC----CCCCCCEEEccC
Confidence 3 334555555555555553 3322 245556666666554 1221 124556666666
Q ss_pred ccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEcc
Q 048205 268 NMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLG 347 (1027)
Q Consensus 268 N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 347 (1027)
|+|++ +| ..+++|+.|+|++|+|+.+.+ .+++|+.|+|++|+|+. +|..+.++++|+.|+|+
T Consensus 231 N~L~~----------lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 231 NRLTS----------LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLE 292 (622)
T ss_dssp SCCSC----------CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECC
T ss_pred CccCc----------CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEec
Confidence 66552 22 223556666666666664332 45566666666666663 35556666777777777
Q ss_pred CccccccCCC
Q 048205 348 SNSFFGRLPS 357 (1027)
Q Consensus 348 ~N~l~~~~~~ 357 (1027)
+|.+.+..|.
T Consensus 293 ~N~l~~~~~~ 302 (622)
T 3g06_A 293 GNPLSERTLQ 302 (622)
T ss_dssp SCCCCHHHHH
T ss_pred CCCCCCcCHH
Confidence 7766554443
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.4e-26 Score=268.63 Aligned_cols=169 Identities=30% Similarity=0.348 Sum_probs=94.8
Q ss_pred CCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEc
Q 048205 51 TLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFL 130 (1027)
Q Consensus 51 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 130 (1027)
+|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| +..+++|++|+|++|.+++ ++ ..++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-----~~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL-----VGPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEE-EE-----ECTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCC-CC-----CCCCcCEEEC
Confidence 56666666666665555556666666666666666654433 5566666666666666552 11 1255555555
Q ss_pred cCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhcc-CCCCCCeeeccccccCC
Q 048205 131 DENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELG-NLAELEKLQLQNNFLTG 209 (1027)
Q Consensus 131 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~ 209 (1027)
++|.+++..+. .+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..+. .+++|++|+|++|.|++
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 55555544333 235566666666666655555566666666666666666655555544 45566666666666654
Q ss_pred CCCccccCCCCCCEEEccCccCC
Q 048205 210 TIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 210 ~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
. | .+..+++|+.|+|++|.|+
T Consensus 184 ~-~-~~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 184 V-K-GQVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp E-E-CCCCCTTCCEEECCSSCCC
T ss_pred c-c-ccccCCCCCEEECCCCCCC
Confidence 3 1 2233556666666666554
No 322
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=1e-27 Score=291.25 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=22.0
Q ss_pred CCCCCeeecCCCcccCCCCcccC-CcccccEEecC
Q 048205 387 TSKLSTLELQRNSFSGFIPNTFG-NLRNLKWLDLG 420 (1027)
Q Consensus 387 l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~ 420 (1027)
+++|+.|.++.|.+++..+..+. .+++|+.|+|+
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 56677776666666654444443 46777777777
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=6e-28 Score=293.22 Aligned_cols=161 Identities=16% Similarity=0.121 Sum_probs=104.9
Q ss_pred ccccceEEecCccccCchhHhhh-cccccceeecc--C----ceeecccCCCCCccccccccCccccccCcccEEecCCC
Q 048205 488 LTNLIAIYLGVNKLNGSILIALG-KLKKLQLLSLK--D----NQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLN 560 (1027)
Q Consensus 488 l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N 560 (1027)
+++|+.|.++.|.+++..+..+. .+++|+.|+|+ + |++++. | ....++..+..+++|+.|++++
T Consensus 371 ~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~-~-------~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 371 CPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE-P-------LDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp CTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC-C-------THHHHHHHHHHCTTCCEEECCS-
T ss_pred chhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC-c-------hhhHHHHHHhhCCCccEEeecC-
Confidence 45666666666666665555554 47777777777 3 333210 0 0012223355677788888876
Q ss_pred ccccCccccccC-cccccEEcccccccccccchhh-ccCccccEEEccCCccccCccc-cccccccccccccccccccCC
Q 048205 561 FFTGPLPLEIGN-LKVLVQIDLSINNFSDVIPTTI-GGLKDLQYLFLKYNRLQGSIPD-SIGDMINLKSLNLSNNNLFGI 637 (1027)
Q Consensus 561 ~l~~~~p~~~~~-l~~L~~L~ls~n~l~~~~p~~~-~~l~~L~~L~L~~N~l~g~ip~-~~~~l~~L~~L~l~~N~l~~~ 637 (1027)
.+++..+..++. +++|+.|+|++|.+++..+..+ .++++|++|+|++|.+++..+. .+..+++|+.|+|++|+++..
T Consensus 442 ~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~ 521 (594)
T 2p1m_B 442 LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFG 521 (594)
T ss_dssp SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHH
T ss_pred cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHH
Confidence 566555555555 7889999999999876655555 7789999999999998654443 345688999999999988544
Q ss_pred chhhh-hcccCCcceeccCCC
Q 048205 638 IPISL-EKLLDLKDINVSFNK 657 (1027)
Q Consensus 638 ~p~~l-~~l~~L~~l~l~~N~ 657 (1027)
-...+ ..++.|+...+..+.
T Consensus 522 ~~~~l~~~lp~l~i~~~~~~~ 542 (594)
T 2p1m_B 522 ACKLLGQKMPKLNVEVIDERG 542 (594)
T ss_dssp HHHHHHHHCTTEEEEEECSSS
T ss_pred HHHHHHHhCCCCEEEEecCCC
Confidence 44444 456666665555443
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.6e-24 Score=235.38 Aligned_cols=197 Identities=26% Similarity=0.231 Sum_probs=98.0
Q ss_pred EEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccc
Q 048205 31 ISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNL 110 (1027)
Q Consensus 31 L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 110 (1027)
++..+..+. .+|..+. ++|++|+|++|++++..+..|.++++|++|++++|++++..+..|..+++|++|++++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444444444 3444443 3455555555555544444555555555555555555544444555555555555555555
Q ss_pred cccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc-cCccccCCCCCcEEEccCccCCCCCCh
Q 048205 111 TGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD-IPKEIGNLTKLKYLHLDQNRLQGEIPE 189 (1027)
Q Consensus 111 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~ 189 (1027)
+ .++...+.++++|++|++++|++.+..+..+..+++|++|++++|.+++. +|..|.++++|++|+|++|++++..+.
T Consensus 89 ~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~ 167 (276)
T 2z62_A 89 Q-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (276)
T ss_dssp C-EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGG
T ss_pred C-ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHH
Confidence 4 23333444444555555555555444444455555555555555555532 355555555555555555555544444
Q ss_pred hccCCCCCC----eeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 190 ELGNLAELE----KLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 190 ~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
.+..+.+|+ .|++++|.+++..+. .....+|+.|++++|+++
T Consensus 168 ~~~~l~~L~~l~l~L~ls~n~l~~~~~~-~~~~~~L~~L~L~~n~l~ 213 (276)
T 2z62_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPG-AFKEIRLKELALDTNQLK 213 (276)
T ss_dssp GGHHHHTCTTCCEEEECCSSCCCEECTT-SSCSCCEEEEECCSSCCS
T ss_pred HhhhhhhccccceeeecCCCcccccCcc-ccCCCcccEEECCCCcee
Confidence 444444444 455555555533222 222235555555555554
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3e-24 Score=233.31 Aligned_cols=226 Identities=23% Similarity=0.198 Sum_probs=197.5
Q ss_pred EEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcc
Q 048205 6 YLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNF 85 (1027)
Q Consensus 6 ~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~ 85 (1027)
.++-.+.+++ .+|..+. ++|++|+|++|.+++..+..+..+++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 87 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNP 87 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCc
Confidence 4566666777 5676664 689999999999997777799999999999999999998888899999999999999999
Q ss_pred cCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCcc-CcccccCCCCCcEEEccCCccccccC
Q 048205 86 LTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGK-IPSTLLRCKHLQTLSLSINDFSGDIP 164 (1027)
Q Consensus 86 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p 164 (1027)
+++..+..|..+++|++|++++|++++ ++...+..+++|++|++++|++++. +|..|..+++|++|++++|.+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 88 IQSLALGAFSGLSSLQKLVAVETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCccChhhhcCCccccEEECCCCCccc-cCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 998888899999999999999999984 5555688899999999999999875 58999999999999999999998777
Q ss_pred ccccCCCCCc----EEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCC
Q 048205 165 KEIGNLTKLK----YLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFP 236 (1027)
Q Consensus 165 ~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 236 (1027)
..|..+.+|+ .|++++|++++..+..+. ..+|++|+|++|++++..+..|..+++|+.|++++|.+++..|
T Consensus 167 ~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 167 TDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp GGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred HHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 8888887777 899999999966555554 4589999999999997766778899999999999999986544
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.3e-23 Score=227.28 Aligned_cols=202 Identities=27% Similarity=0.293 Sum_probs=145.1
Q ss_pred CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCC
Q 048205 27 RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 106 (1027)
+.+.++++++.++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.++...+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4677788877777 5676554 567777887777776555677777777777777777775555556777777777777
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGE 186 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 186 (1027)
+|+++ .++...+..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|++++.
T Consensus 94 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCC-CCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCC-cCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 77776 45556666777777777777777766666777777777777777777765555677777777777777777766
Q ss_pred CChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 187 IPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 187 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 5566777777777777777777555555667777777777777765
No 327
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.1e-24 Score=229.54 Aligned_cols=223 Identities=21% Similarity=0.199 Sum_probs=137.6
Q ss_pred CCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCC
Q 048205 27 RLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLS 106 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 106 (1027)
++..+++..+.+.+. .....+++|+.|++++|.++ .++ .++.+++|++|++++|.+++. ..+..+++|++|+++
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECC
Confidence 344455555555432 23445666666666666665 222 356666666666666666632 356666666666666
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGE 186 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 186 (1027)
+|+++ .++...+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++.
T Consensus 94 ~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 94 GNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TSCCC-CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCccC-ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 66665 34444555666666666666666666666666677777777777777655555666677777777777777765
Q ss_pred CChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEec
Q 048205 187 IPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLS 266 (1027)
Q Consensus 187 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls 266 (1027)
.+..|+.+++|++|++++|++++..+..+..+++|+.|++++|.+.+ .++.|+.++++
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----------------------~~~~l~~l~~~ 230 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----------------------TCPGIRYLSEW 230 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC----------------------CTTTTHHHHHH
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc----------------------cCcHHHHHHHH
Confidence 55566667777777777777776655566667777777777776652 23345556666
Q ss_pred cccccccCCCCC
Q 048205 267 KNMFYGEIPSDL 278 (1027)
Q Consensus 267 ~N~l~~~~p~~~ 278 (1027)
.|.++|.+|.++
T Consensus 231 ~n~~~g~ip~~~ 242 (272)
T 3rfs_A 231 INKHSGVVRNSA 242 (272)
T ss_dssp HHHTGGGBBCTT
T ss_pred HHhCCCcccCcc
Confidence 666666555443
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=4e-23 Score=223.45 Aligned_cols=204 Identities=28% Similarity=0.298 Sum_probs=185.6
Q ss_pred CCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEcc
Q 048205 3 NLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQ 82 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 82 (1027)
+.+.+++++++++ .+|..+. +++++|+|++|++++..+..++.+++|++|+|++|++++..+..|.++++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5689999999999 5776664 789999999999997777789999999999999999996666678999999999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD 162 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (1027)
+|++++..+..|..+++|++|++++|+++ .++...+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLK-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccC-eeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999877788899999999999999998 56777789999999999999999988888899999999999999999987
Q ss_pred cCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCC
Q 048205 163 IPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGT 210 (1027)
Q Consensus 163 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 210 (1027)
.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+...
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 777899999999999999999987777899999999999999998743
No 329
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.9e-23 Score=226.54 Aligned_cols=203 Identities=27% Similarity=0.224 Sum_probs=160.5
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLS 101 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 101 (1027)
+.++++++++++++|.++ .+|..+. +.+++|+|++|+|++..+..|..+++|++|+|++|.+++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 677788888888888888 6777665 688888888888887778888888888888888888885433 26788888
Q ss_pred eEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCc
Q 048205 102 NLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQN 181 (1027)
Q Consensus 102 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 181 (1027)
+|++++|+++ .++. .+..+++|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~-~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPL-LGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCC-CTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCch-hhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888887 3433 4567778888888888888777778888888888888888888766777788888888888888
Q ss_pred cCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 182 RLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 182 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
+++...+..|..+++|++|+|++|+|+ .+|..++.+.+|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 888666666777888888888888887 66777777778888888888775
No 330
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=7.1e-25 Score=259.40 Aligned_cols=186 Identities=17% Similarity=0.142 Sum_probs=145.5
Q ss_pred CccceeeccccceEEEEEecCCceEEEEEEecccc--------hhHHHHHHHHHHHhhccCCccceEEeEEecCCeeEEE
Q 048205 753 SENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG--------RAIKSFDIECGMIKRIRHRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 753 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lV 824 (1027)
...+.||+|+||+||+|+. .++.+|+|+...... ...+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 478899998643211 1234578999999999999999666666677778999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCC
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKED 904 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~ 904 (1027)
|||+++++|.+++.. +..++.|+++||+||| +++|+||||||+||+++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999875 5679999999999999 999999999999999998 99999999999764322
Q ss_pred Ccc-----eecccccCccccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCC
Q 048205 905 QSL-----TQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLMETFTRKKPTD 953 (1027)
Q Consensus 905 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~elltg~~p~~ 953 (1027)
... ......||+.|+|||++.. ..|+..+|+|+.++-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1235679999999999987 567888999999999999888877764
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=5.4e-23 Score=224.36 Aligned_cols=204 Identities=29% Similarity=0.377 Sum_probs=111.8
Q ss_pred ccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCC
Q 048205 46 IGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLL 125 (1027)
Q Consensus 46 i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 125 (1027)
++.+++++++++++|+++ .+|..+. ++++.|+|++|.+++..+..|..+++|++|+|++|++++ ++.. ..+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC--CCCCcC
Confidence 556667777777777776 4555443 566777777777766666666667777777777766653 2211 344444
Q ss_pred cEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeecccc
Q 048205 126 QTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNN 205 (1027)
Q Consensus 126 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 205 (1027)
++|++++|+++ .+|..+..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 80 ~~L~Ls~N~l~-------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 80 GTLDLSHNQLQ-------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp CEEECCSSCCS-------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 44444444444 34444444555555555555555444444555555555555555
Q ss_pred ccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCc
Q 048205 206 FLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPK 285 (1027)
Q Consensus 206 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~ 285 (1027)
+|++..+..|..+++|+.|+|++|+|+ .+|...|..+++|+.|+|++|+|+ .+|.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~---------------~l~~~~~~~l~~L~~L~L~~N~l~----------~ip~ 189 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLT---------------ELPAGLLNGLENLDTLLLQENSLY----------TIPK 189 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCS---------------CCCTTTTTTCTTCCEEECCSSCCC----------CCCT
T ss_pred CCCccChhhcccccCCCEEECCCCcCC---------------ccCHHHhcCcCCCCEEECCCCcCC----------ccCh
Confidence 555444444445555555555555554 333444444555555555555554 3444
Q ss_pred cccCcCCccceeccCccccc
Q 048205 286 EIGNLAKLEKLDLQFNRLQC 305 (1027)
Q Consensus 286 ~l~~l~~L~~L~L~~N~l~~ 305 (1027)
.+..+.+|+.|+|++|.+.+
T Consensus 190 ~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 190 GFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp TTTTTCCCSEEECCSCCBCC
T ss_pred hhcccccCCeEEeCCCCccC
Confidence 45555566666666666653
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=3.1e-23 Score=224.50 Aligned_cols=222 Identities=24% Similarity=0.237 Sum_probs=186.1
Q ss_pred cEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 5 EYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 5 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
..+++.++.+.+.. .+..+++|+.|++++|.++ .++ .++.+++|++|+|++|++++ + ..+..+++|++|+|++|
T Consensus 22 ~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 22 IKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTS
T ss_pred HHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCC
Confidence 34456666666543 3567889999999999987 333 58889999999999999974 3 47889999999999999
Q ss_pred ccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccC
Q 048205 85 FLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIP 164 (1027)
Q Consensus 85 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 164 (1027)
.+++..+..|..+++|++|++++|+++ .++...+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+
T Consensus 96 ~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 174 (272)
T 3rfs_A 96 QLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccCccChhHhcCCcCCCEEECCCCcCC-ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCH
Confidence 999777777889999999999999998 5666778889999999999999998888888999999999999999997777
Q ss_pred ccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchh
Q 048205 165 KEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMH 240 (1027)
Q Consensus 165 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 240 (1027)
..|+.+++|++|+|++|++++..+..|..+++|++|++++|.+.+. +++|+.|+++.|.++|.+|..+.
T Consensus 175 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 175 GVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred HHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccc
Confidence 7789999999999999999988787889999999999999988753 45788999999999988877654
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.2e-25 Score=249.12 Aligned_cols=264 Identities=19% Similarity=0.216 Sum_probs=124.4
Q ss_pred eeccCccccccCCccccCcCcccceeccCcccccccC----ccccccCCcceEEccCccccccCCCCccCCCCCccEEEc
Q 048205 296 LDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVP----TTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSL 371 (1027)
Q Consensus 296 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L 371 (1027)
+++++|++++.+|..+...++|++|+|++|.+.+..+ ..|.+++ .+|++|+|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~------------------------~~L~~L~L 58 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTP------------------------ASVTSLNL 58 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCC------------------------TTCCEEEC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCC------------------------CceeEEEC
Confidence 3455555555555444444445555555555554443 3333333 04555555
Q ss_pred cccccCCcCcccccCC-----CCCCeeecCCCcccCCCCcccCC----c-ccccEEecCCCCCCCCCCccccccccc-cc
Q 048205 372 SGNNFSGTIPSFIFNT-----SKLSTLELQRNSFSGFIPNTFGN----L-RNLKWLDLGDNYLTSSTSELSFLSSSN-CK 440 (1027)
Q Consensus 372 s~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~~~l~~~~~~~-l~ 440 (1027)
++|++++..+..+..+ ++|++|+|++|++++..+..+.. + ++|++|+|++|+|+..+.....-.+.. ++
T Consensus 59 s~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 138 (362)
T 3goz_A 59 SGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPA 138 (362)
T ss_dssp CSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCT
T ss_pred cCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCC
Confidence 5555544444444443 55555555555555444443222 2 455555555555544333211111112 23
Q ss_pred cccEeeccCCCCCCCCCccccCcccccceeecCCCccccccCccccccc-ccceEEecCccccCchhHhhhc----c-cc
Q 048205 441 YLEYFSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLT-NLIAIYLGVNKLNGSILIALGK----L-KK 514 (1027)
Q Consensus 441 ~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~----l-~~ 514 (1027)
+|++|+|++|++++..+. .++..+..+. +|++|+|++|++++..+..+.. + ++
T Consensus 139 ~L~~L~Ls~N~l~~~~~~---------------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~ 197 (362)
T 3goz_A 139 SITSLNLRGNDLGIKSSD---------------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPAS 197 (362)
T ss_dssp TCCEEECTTSCGGGSCHH---------------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTT
T ss_pred ceeEEEccCCcCCHHHHH---------------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCC
Confidence 455555555554432111 1223333333 6666666666666555544433 3 46
Q ss_pred cceeeccCceeecccCCCCCccccccccCcccccc-CcccEEecCCCccccCcc----ccccCcccccEEcccccccccc
Q 048205 515 LQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNL-KDILCLNLSLNFFTGPLP----LEIGNLKVLVQIDLSINNFSDV 589 (1027)
Q Consensus 515 L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~ls~n~l~~~ 589 (1027)
|++|+|++|++++. ....++..+..+ ++|++|+|++|.+++.-+ ..+..+++|+.|+|++|.+.+.
T Consensus 198 L~~L~Ls~N~i~~~---------~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i 268 (362)
T 3goz_A 198 VTSLDLSANLLGLK---------SYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNM 268 (362)
T ss_dssp CCEEECTTSCGGGS---------CHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTC
T ss_pred CCEEECCCCCCChh---------HHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcccc
Confidence 77777777766431 112244444442 356666666666554322 2234455566666666653322
Q ss_pred -------cchhhccCccccEEEccCCccccC
Q 048205 590 -------IPTTIGGLKDLQYLFLKYNRLQGS 613 (1027)
Q Consensus 590 -------~p~~~~~l~~L~~L~L~~N~l~g~ 613 (1027)
++..+..+++|+.|||++|++.+.
T Consensus 269 ~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 269 SKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 223344555555555555555544
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1e-24 Score=249.30 Aligned_cols=255 Identities=18% Similarity=0.232 Sum_probs=168.7
Q ss_pred cCcccccCCCCCCeeecCCCcccCCCC----cccCCcccccEEecCCCCCCCCCCccccc------cccccccccEeecc
Q 048205 379 TIPSFIFNTSKLSTLELQRNSFSGFIP----NTFGNLRNLKWLDLGDNYLTSSTSELSFL------SSSNCKYLEYFSIS 448 (1027)
Q Consensus 379 ~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~~~l~~~------~~~~l~~L~~L~Ls 448 (1027)
.++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+..+...++.. .+..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 344555556666666666666654422 33556666666666666554433222110 12345666666666
Q ss_pred CCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhh----cc---------ccc
Q 048205 449 NNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALG----KL---------KKL 515 (1027)
Q Consensus 449 ~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l---------~~L 515 (1027)
+|+++.... ..+|..+..+++|++|+|++|++++..+..+. .+ ++|
T Consensus 103 ~n~l~~~~~---------------------~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L 161 (386)
T 2ca6_A 103 DNAFGPTAQ---------------------EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPL 161 (386)
T ss_dssp SCCCCTTTH---------------------HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCcCCHHHH---------------------HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC
Confidence 666543100 02455666777777777777777654443333 33 788
Q ss_pred ceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccc--c---CccccccCcccccEEcccccccc---
Q 048205 516 QLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFT--G---PLPLEIGNLKVLVQIDLSINNFS--- 587 (1027)
Q Consensus 516 ~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~ls~n~l~--- 587 (1027)
++|+|++|+++.. ....+...+..+++|+.|++++|.++ | .+|..+..+++|+.|+|++|.++
T Consensus 162 ~~L~L~~n~l~~~---------~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g 232 (386)
T 2ca6_A 162 RSIICGRNRLENG---------SMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG 232 (386)
T ss_dssp CEEECCSSCCTGG---------GHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH
T ss_pred cEEECCCCCCCcH---------HHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH
Confidence 8888888887411 11122245667778888888888877 3 34447778888888888888885
Q ss_pred -cccchhhccCccccEEEccCCccccC----ccccc--cccccccccccccccccC----Cchhhh-hcccCCcceeccC
Q 048205 588 -DVIPTTIGGLKDLQYLFLKYNRLQGS----IPDSI--GDMINLKSLNLSNNNLFG----IIPISL-EKLLDLKDINVSF 655 (1027)
Q Consensus 588 -~~~p~~~~~l~~L~~L~L~~N~l~g~----ip~~~--~~l~~L~~L~l~~N~l~~----~~p~~l-~~l~~L~~l~l~~ 655 (1027)
+.+|..+..+++|++|+|++|++++. +|..+ +.+++|++|+|++|++++ .+|..+ .++++|+.|++++
T Consensus 233 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~ 312 (386)
T 2ca6_A 233 SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 312 (386)
T ss_dssp HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccC
Confidence 56888888888889999998888865 66766 448888999999998887 488887 6688899999999
Q ss_pred CCCCCCCC
Q 048205 656 NKLEGEIP 663 (1027)
Q Consensus 656 N~l~g~~p 663 (1027)
|++++..|
T Consensus 313 N~l~~~~~ 320 (386)
T 2ca6_A 313 NRFSEEDD 320 (386)
T ss_dssp SBSCTTSH
T ss_pred CcCCcchh
Confidence 88887654
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.6e-24 Score=241.38 Aligned_cols=265 Identities=20% Similarity=0.253 Sum_probs=126.8
Q ss_pred EecCCCcCcccCCccCcCCCCCcEEEccCCcccccCC----ccccccC-CCcEEEccccccceeCcccccCC-----CCC
Q 048205 7 LFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIP----KEIGNVT-TLIGLHLRGNKLQGEIPEELGNL-----AEL 76 (1027)
Q Consensus 7 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p----~~i~~l~-~L~~L~L~~n~i~~~~p~~l~~l-----~~L 76 (1027)
.++++|.+++.+|..+...++|++|+|++|.+++..+ ..+..++ +|++|+|++|+|++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555566665555544444456666666666654433 4455555 55566666665554444444443 555
Q ss_pred CEEEccCcccCCccCcccc----CC-CCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCccccc----C-C
Q 048205 77 EELWLQNNFLTGTIPSSIF----NL-SSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLL----R-C 146 (1027)
Q Consensus 77 ~~L~L~~N~l~~~~p~~l~----~l-~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~-l 146 (1027)
++|+|++|.+++..+..+. .+ ++|++|+|++|+++ +..+..+. . .
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~-------------------------~~~~~~l~~~l~~~~ 137 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFS-------------------------SKSSSEFKQAFSNLP 137 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGG-------------------------GSCHHHHHHHHTTSC
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCC-------------------------cHHHHHHHHHHHhCC
Confidence 5555555555544333222 22 45555555555554 33332222 1 1
Q ss_pred CCCcEEEccCCccccc----cCccccCCC-CCcEEEccCccCCCCCChhcc----CC-CCCCeeeccccccCCC----CC
Q 048205 147 KHLQTLSLSINDFSGD----IPKEIGNLT-KLKYLHLDQNRLQGEIPEELG----NL-AELEKLQLQNNFLTGT----IP 212 (1027)
Q Consensus 147 ~~L~~L~Ls~N~l~~~----~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~p 212 (1027)
++|++|+|++|.++.. ++..+..++ +|++|+|++|++++..+..+. .. ++|++|+|++|.|++. ++
T Consensus 138 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~ 217 (362)
T 3goz_A 138 ASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELA 217 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHH
Confidence 3455555555555421 222233333 555555555555544333222 22 3555555555555532 22
Q ss_pred ccccC-CCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcC
Q 048205 213 PSIFN-LSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLA 291 (1027)
Q Consensus 213 ~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~ 291 (1027)
..+.. .++|++|+|++|.+++..+..+ ...+..++.|+.|+|++|.+.+..+..+ ..++..+..++
T Consensus 218 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l-----------~~~~~~l~~L~~L~L~~n~l~~i~~~~~--~~l~~~~~~l~ 284 (362)
T 3goz_A 218 YIFSSIPNHVVSLNLCLNCLHGPSLENL-----------KLLKDSLKHLQTVYLDYDIVKNMSKEQC--KALGAAFPNIQ 284 (362)
T ss_dssp HHHHHSCTTCCEEECCSSCCCCCCHHHH-----------HHTTTTTTTCSEEEEEHHHHTTCCHHHH--HHHHTTSTTCC
T ss_pred HHHhcCCCCceEEECcCCCCCcHHHHHH-----------HHHHhcCCCccEEEeccCCccccCHHHH--HHHHHHhccCC
Confidence 33333 2356666666665553211111 1223445556666666665432111100 02334455667
Q ss_pred CccceeccCccccccCCc
Q 048205 292 KLEKLDLQFNRLQCVIPH 309 (1027)
Q Consensus 292 ~L~~L~L~~N~l~~~~~~ 309 (1027)
+|+.|++++|++....+.
T Consensus 285 ~L~~LdL~~N~l~~~~~~ 302 (362)
T 3goz_A 285 KIILVDKNGKEIHPSHSI 302 (362)
T ss_dssp EEEEECTTSCBCCGGGCH
T ss_pred ceEEEecCCCcCCCcchH
Confidence 777777777777655433
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.9e-23 Score=229.43 Aligned_cols=225 Identities=19% Similarity=0.216 Sum_probs=168.1
Q ss_pred CCCcEEEccCCcccccCCc---cccccCCCcEEEccccccceeCcccc--cCCCCCCEEEccCcccCCccC----ccccC
Q 048205 26 KRLRNISLSLNDFSGTIPK---EIGNVTTLIGLHLRGNKLQGEIPEEL--GNLAELEELWLQNNFLTGTIP----SSIFN 96 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~~~~p~---~i~~l~~L~~L~L~~n~i~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p----~~l~~ 96 (1027)
..++.|.+.++.++...-. .+..+++|++|+|++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4477888888777532111 12234668888888888888888887 888888888888888886544 34557
Q ss_pred CCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCcc---C-cccccCCCCCcEEEccCCccccccCc----ccc
Q 048205 97 LSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGK---I-PSTLLRCKHLQTLSLSINDFSGDIPK----EIG 168 (1027)
Q Consensus 97 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~ 168 (1027)
+++|++|+|++|+++ .++...+..+++|++|+|++|++.+. . +..+..+++|++|+|++|.++. ++. .++
T Consensus 144 ~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHh
Confidence 888888888888886 45666777888888888888887642 1 2334678888899999988863 333 356
Q ss_pred CCCCCcEEEccCccCCCCCChhccCC---CCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhc
Q 048205 169 NLTKLKYLHLDQNRLQGEIPEELGNL---AELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRL 245 (1027)
Q Consensus 169 ~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 245 (1027)
.+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~------------ 286 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR------------ 286 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS------------
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC------------
Confidence 78889999999999887777777666 68899999999988 6677664 788999999998873
Q ss_pred cccCCccccCCCccccEEEeccccccc
Q 048205 246 SAELPAKFCNNIPFLEEIYLSKNMFYG 272 (1027)
Q Consensus 246 ~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 272 (1027)
+|. +..++.|+.|+|++|.|+.
T Consensus 287 ---~~~--~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 287 ---APQ--PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp ---CCC--TTSCCCCSCEECSSTTTSC
T ss_pred ---Cch--hhhCCCccEEECcCCCCCC
Confidence 222 3567888999999998875
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2.6e-24 Score=245.92 Aligned_cols=216 Identities=21% Similarity=0.305 Sum_probs=128.9
Q ss_pred cCCccCcCCCCCcEEEccCCcccccCCc----cccccCCCcEEEcccc---ccceeCcccc-------cCCCCCCEEEcc
Q 048205 17 KIPSTLSNCKRLRNISLSLNDFSGTIPK----EIGNVTTLIGLHLRGN---KLQGEIPEEL-------GNLAELEELWLQ 82 (1027)
Q Consensus 17 ~~~~~~~~~~~L~~L~L~~n~l~~~~p~----~i~~l~~L~~L~L~~n---~i~~~~p~~l-------~~l~~L~~L~L~ 82 (1027)
.++..+..+++|++|+|++|.+++..+. .+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 4555666677777777777777655333 3556777777777775 3334445444 566777777777
Q ss_pred CcccCC----ccCccccCCCCCCeEeCCcccccccchhhh---hcCC---------CCCcEEEccCCcCC-ccCc---cc
Q 048205 83 NNFLTG----TIPSSIFNLSSLSNLDLSVNNLTGELLANI---CSNL---------PLLQTLFLDENNFD-GKIP---ST 142 (1027)
Q Consensus 83 ~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~---~~~l---------~~L~~L~L~~N~l~-~~~~---~~ 142 (1027)
+|.+++ .+|..+..+++|++|+|++|.+++..+..+ +..+ ++|++|+|++|+++ ...+ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 777765 355666677777777777777753222221 2222 66667777666665 2223 34
Q ss_pred ccCCCCCcEEEccCCccc--c---ccCccccCCCCCcEEEccCccCC----CCCChhccCCCCCCeeeccccccCCC---
Q 048205 143 LLRCKHLQTLSLSINDFS--G---DIPKEIGNLTKLKYLHLDQNRLQ----GEIPEELGNLAELEKLQLQNNFLTGT--- 210 (1027)
Q Consensus 143 ~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~--- 210 (1027)
+..+++|++|+|++|.++ + ..|..+..+++|++|+|++|+++ ..+|..+..+++|++|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 556666666666666665 1 23335666666666666666664 34555566666666666666666543
Q ss_pred -CCcccc--CCCCCCEEEccCccCC
Q 048205 211 -IPPSIF--NLSSLSDLELSFNSLT 232 (1027)
Q Consensus 211 -~p~~~~--~l~~L~~L~Ls~N~l~ 232 (1027)
++..+. .+++|+.|+|++|.++
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHHHHHhhccCCCeEEEECcCCcCC
Confidence 334442 2566666666666654
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.4e-23 Score=235.21 Aligned_cols=222 Identities=17% Similarity=0.183 Sum_probs=104.6
Q ss_pred CcEEecCCCcCcccCCccCcCC--CCCcEEEccCCcccccCCccccccCCCcEEEcccccccee-CcccccCCCCCCEEE
Q 048205 4 LEYLFLKSNMFHGKIPSTLSNC--KRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGE-IPEELGNLAELEELW 80 (1027)
Q Consensus 4 l~~L~l~~n~l~~~~~~~~~~~--~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~-~p~~l~~l~~L~~L~ 80 (1027)
++.+++++|.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 345555555444 2233344 4555555555555533332 33455555555555555433 444555555555555
Q ss_pred ccCcccCCccCccccCCCCCCeEeCCcc-cccccchhhhhcCCCCCcEEEccCC-cCCcc-CcccccCCC-CCcEEEccC
Q 048205 81 LQNNFLTGTIPSSIFNLSSLSNLDLSVN-NLTGELLANICSNLPLLQTLFLDEN-NFDGK-IPSTLLRCK-HLQTLSLSI 156 (1027)
Q Consensus 81 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N-~l~~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~ 156 (1027)
|++|.+++..+..+..+++|++|++++| .+++......+..+++|++|++++| .+++. ++..+..++ +|++|++++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~ 204 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSG 204 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCS
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCC
Confidence 5555555444455555555555555555 3443223333444555555555555 44432 334444455 555555555
Q ss_pred C--ccc-cccCccccCCCCCcEEEccCcc-CCCCCChhccCCCCCCeeeccccc-cCCCCCccccCCCCCCEEEccCc
Q 048205 157 N--DFS-GDIPKEIGNLTKLKYLHLDQNR-LQGEIPEELGNLAELEKLQLQNNF-LTGTIPPSIFNLSSLSDLELSFN 229 (1027)
Q Consensus 157 N--~l~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N 229 (1027)
| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+.++++|+.|++++|
T Consensus 205 ~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 205 YRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 5 232 2233444445555555555555 343444444445555555555543 11111113444445555555544
No 339
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.9e-22 Score=213.96 Aligned_cols=178 Identities=21% Similarity=0.233 Sum_probs=81.8
Q ss_pred CCcEEEccccccceeCcccccCCCCCCEEEccCcc-cCCccCccccCCCCCCeEeCCc-ccccccchhhhhcCCCCCcEE
Q 048205 51 TLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNF-LTGTIPSSIFNLSSLSNLDLSV-NNLTGELLANICSNLPLLQTL 128 (1027)
Q Consensus 51 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~~l~~L~~L 128 (1027)
+|++|+|++|+|++..+..|+++++|++|++++|. +++..+..|.++++|++|++++ |+++ .++...|.++++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEE
Confidence 44444444444443333344444444444444443 4433333444444444444444 4443 3333344444444444
Q ss_pred EccCCcCCccCcccccCCCCCc---EEEccCC-ccccccCccccCCCCCc-EEEccCccCCCCCChhccCCCCCCeeecc
Q 048205 129 FLDENNFDGKIPSTLLRCKHLQ---TLSLSIN-DFSGDIPKEIGNLTKLK-YLHLDQNRLQGEIPEELGNLAELEKLQLQ 203 (1027)
Q Consensus 129 ~L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 203 (1027)
++++|++++ +|. |..+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++.+.+..|.. ++|++|+++
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcC
Confidence 444444443 222 44444444 5555555 55544444455555555 5555555555222222322 455555555
Q ss_pred ccc-cCCCCCccccCC-CCCCEEEccCccCC
Q 048205 204 NNF-LTGTIPPSIFNL-SSLSDLELSFNSLT 232 (1027)
Q Consensus 204 ~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~ 232 (1027)
+|+ +++..+..|.++ ++|+.|++++|+++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 553 554334445555 55555555555554
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.7e-22 Score=223.19 Aligned_cols=225 Identities=21% Similarity=0.231 Sum_probs=184.8
Q ss_pred CCcEEecCCCcCcccCCc---cCcCCCCCcEEEccCCcccccCCccc--cccCCCcEEEccccccceeCc----ccccCC
Q 048205 3 NLEYLFLKSNMFHGKIPS---TLSNCKRLRNISLSLNDFSGTIPKEI--GNVTTLIGLHLRGNKLQGEIP----EELGNL 73 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~---~~~~~~~L~~L~L~~n~l~~~~p~~i--~~l~~L~~L~L~~n~i~~~~p----~~l~~l 73 (1027)
.++.+.+.++.+....-. .+..+++|++|++++|.+++..|..+ +.+++|++|+|++|++++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467888888877532111 12345779999999999999999888 899999999999999986555 445679
Q ss_pred CCCCEEEccCcccCCccCccccCCCCCCeEeCCccccccc--ch-hhhhcCCCCCcEEEccCCcCCccCcc---cccCCC
Q 048205 74 AELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGE--LL-ANICSNLPLLQTLFLDENNFDGKIPS---TLLRCK 147 (1027)
Q Consensus 74 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~--~~-~~~~~~l~~L~~L~L~~N~l~~~~~~---~~~~l~ 147 (1027)
++|++|+|++|++.+..+..|..+++|++|+|++|++.+. ++ ...+..+++|++|+|++|+++...+. .+..++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 9999999999999988889999999999999999998642 22 23346889999999999999733221 367889
Q ss_pred CCcEEEccCCccccccCccccCC---CCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEE
Q 048205 148 HLQTLSLSINDFSGDIPKEIGNL---TKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDL 224 (1027)
Q Consensus 148 ~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 224 (1027)
+|++|+|++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 99999999999998778888777 69999999999999 5677664 7999999999999964 43 7888999999
Q ss_pred EccCccCC
Q 048205 225 ELSFNSLT 232 (1027)
Q Consensus 225 ~Ls~N~l~ 232 (1027)
+|++|+++
T Consensus 300 ~L~~N~l~ 307 (310)
T 4glp_A 300 TLDGNPFL 307 (310)
T ss_dssp ECSSTTTS
T ss_pred ECcCCCCC
Confidence 99999997
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=7.2e-22 Score=209.46 Aligned_cols=209 Identities=18% Similarity=0.186 Sum_probs=179.0
Q ss_pred CCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccc-cceeCcccccCCCCCCEEEccC-cccCC
Q 048205 11 SNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNK-LQGEIPEELGNLAELEELWLQN-NFLTG 88 (1027)
Q Consensus 11 ~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~-i~~~~p~~l~~l~~L~~L~L~~-N~l~~ 88 (1027)
.++++ .+|. +. ++|++|++++|++++..+..++.+++|++|+|++|+ +++..+..|.++++|++|++++ |++++
T Consensus 20 c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~ 95 (239)
T 2xwt_C 20 CKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY 95 (239)
T ss_dssp ECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE
T ss_pred ccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE
Confidence 33455 5666 44 489999999999997777789999999999999997 9877777899999999999999 99997
Q ss_pred ccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCc---EEEccCC-cCCccCcccccCCCCCc-EEEccCCcccccc
Q 048205 89 TIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQ---TLFLDEN-NFDGKIPSTLLRCKHLQ-TLSLSINDFSGDI 163 (1027)
Q Consensus 89 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~ 163 (1027)
..+..|..+++|++|++++|++++ ++. +..+++|+ +|++++| ++++..+..|.++++|+ +|++++|.++...
T Consensus 96 i~~~~f~~l~~L~~L~l~~n~l~~-lp~--~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~ 172 (239)
T 2xwt_C 96 IDPDALKELPLLKFLGIFNTGLKM-FPD--LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQ 172 (239)
T ss_dssp ECTTSEECCTTCCEEEEEEECCCS-CCC--CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEEC
T ss_pred cCHHHhCCCCCCCEEeCCCCCCcc-ccc--cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccC
Confidence 777889999999999999999985 554 77888888 9999999 99988888999999999 9999999999544
Q ss_pred CccccCCCCCcEEEccCcc-CCCCCChhccCC-CCCCeeeccccccCCCCCccccCCCCCCEEEccCcc
Q 048205 164 PKEIGNLTKLKYLHLDQNR-LQGEIPEELGNL-AELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNS 230 (1027)
Q Consensus 164 p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 230 (1027)
+..|.. ++|++|+|++|+ ++++.+..|..+ ++|++|++++|++++ +|.. .+++|+.|+++++.
T Consensus 173 ~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 173 GYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp TTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC-
T ss_pred HhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCcc
Confidence 445555 899999999995 997777889999 999999999999995 4544 67899999998764
No 342
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=9.6e-22 Score=216.67 Aligned_cols=206 Identities=28% Similarity=0.381 Sum_probs=142.8
Q ss_pred ecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccC
Q 048205 8 FLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLT 87 (1027)
Q Consensus 8 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~ 87 (1027)
.+..+.+++.++ +..+++|++|++++|.++ .+| .+..+++|++|+|++|++++ ++. +..+++|++|+|++|+++
T Consensus 25 ~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 25 AAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCS
T ss_pred HhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCC
Confidence 344455554332 456677888888888777 455 57777888888888888774 343 777888888888888877
Q ss_pred CccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccc
Q 048205 88 GTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEI 167 (1027)
Q Consensus 88 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 167 (1027)
+. + .+..+++|++|++++|++++ ++. +..+++|++|++++|++++..+ +..+++|++|++++|.+++. +. +
T Consensus 99 ~~-~-~~~~l~~L~~L~l~~n~l~~-~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~~-l 169 (308)
T 1h6u_A 99 NV-S-AIAGLQSIKTLDLTSTQITD-VTP--LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL-TP-L 169 (308)
T ss_dssp CC-G-GGTTCTTCCEEECTTSCCCC-CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-G
T ss_pred Cc-h-hhcCCCCCCEEECCCCCCCC-chh--hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-hh-h
Confidence 43 3 57777888888888887764 322 6677777777777777775433 77777777777777777743 32 7
Q ss_pred cCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 168 GNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 168 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
..+++|+.|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.++
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred cCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 777777777777777775433 677777777777777777443 3677777777777777775
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=4.4e-23 Score=231.08 Aligned_cols=250 Identities=17% Similarity=0.162 Sum_probs=136.4
Q ss_pred ccceeccCcccccccCcccccc--CCcceEEccCccccccCCCCccCCCCCccEEEccccccCCc-CcccccCCCCCCee
Q 048205 317 LEWMIFSFNKLVGVVPTTIFNV--STLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGT-IPSFIFNTSKLSTL 393 (1027)
Q Consensus 317 L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 393 (1027)
++.+++++|.+. +..+..+ .+++.|++++|.+.+..+. . ..+++|++|+|++|.+++. +|..+..+++|++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~-~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-H-FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-C-CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-h-ccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 444555555443 2333444 4555666666655444333 1 2455666666666665543 55555556666666
Q ss_pred ecCCCcccCCCCcccCCcccccEEecCCC-CCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccceeec
Q 048205 394 ELQRNSFSGFIPNTFGNLRNLKWLDLGDN-YLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSMEDFHM 472 (1027)
Q Consensus 394 ~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~~l~l 472 (1027)
+|++|.+++..+..|+.+++|++|+|++| .++.
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~---------------------------------------------- 157 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE---------------------------------------------- 157 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH----------------------------------------------
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH----------------------------------------------
Confidence 66666655555555555555555555555 2221
Q ss_pred CCCccccccCcccccccccceEEecCc-cccCc-hhHhhhccc-ccceeeccCceeecccCCCCCccccccccCcccccc
Q 048205 473 PNSNISGSIPKEINNLTNLIAIYLGVN-KLNGS-ILIALGKLK-KLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNL 549 (1027)
Q Consensus 473 ~~n~~~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l 549 (1027)
..+|..++++++|++|++++| ++++. ++..+..++ +|++|+|++|.+
T Consensus 158 ------~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~------------------------ 207 (336)
T 2ast_B 158 ------FALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK------------------------ 207 (336)
T ss_dssp ------HHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG------------------------
T ss_pred ------HHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcc------------------------
Confidence 012233344445555555555 44432 344455555 555555555521
Q ss_pred CcccEEecCCCccc-cCccccccCcccccEEcccccc-cccccchhhccCccccEEEccCCccccCccc---cccccccc
Q 048205 550 KDILCLNLSLNFFT-GPLPLEIGNLKVLVQIDLSINN-FSDVIPTTIGGLKDLQYLFLKYNRLQGSIPD---SIGDMINL 624 (1027)
Q Consensus 550 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~n~-l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~---~~~~l~~L 624 (1027)
.++ +.+|..++.+++|+.|++++|. +++..+..++.+++|++|+|++|. +..|. .++.+++|
T Consensus 208 -----------~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L 274 (336)
T 2ast_B 208 -----------NLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTL 274 (336)
T ss_dssp -----------GSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTC
T ss_pred -----------cCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCC
Confidence 222 2345555566666777777766 555666667777777777777774 12233 46667777
Q ss_pred cccccccccccCCchhhhhccc-CCcceeccCCCCCCCCCC
Q 048205 625 KSLNLSNNNLFGIIPISLEKLL-DLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 625 ~~L~l~~N~l~~~~p~~l~~l~-~L~~l~l~~N~l~g~~p~ 664 (1027)
+.|+|++| ++. ..+..+. .+..|++++|+++|.+|.
T Consensus 275 ~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 275 KTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp CEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred CEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 77777777 322 2344442 366777888888887775
No 344
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=2.2e-21 Score=207.34 Aligned_cols=179 Identities=22% Similarity=0.220 Sum_probs=105.9
Q ss_pred CcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 28 LRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 28 L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
.++++++++.++ .+|..+. +.++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 344555555554 4444443 3455555555555544444455555555555555555444444444444444444444
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
| ++++..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|++++..
T Consensus 93 n-------------------------~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 93 N-------------------------QLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp S-------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred C-------------------------cccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 4 444455555666666666666666666555555666777777777777777555
Q ss_pred ChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCC
Q 048205 188 PEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGN 234 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 234 (1027)
+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+++.
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 55677777777777777777766666677777777777777777654
No 345
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=6.6e-22 Score=222.45 Aligned_cols=170 Identities=21% Similarity=0.163 Sum_probs=80.1
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccC-ccccCCCCCCe-EeCC
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIP-SSIFNLSSLSN-LDLS 106 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~-L~Ls 106 (1027)
+++++++++++ .+|..+. +++++|+|++|+|+...+++|+++++|++|+|++|++.+.+| ..|.+++++++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666666 5555542 455666666666654333455555555555555555543333 23444544443 3333
Q ss_pred cccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccC-ccCCC
Q 048205 107 VNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQ-NRLQG 185 (1027)
Q Consensus 107 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~ 185 (1027)
+|++ +.+.|..|..+++|++|++++|.++...+..+....++..|++.+ |++..
T Consensus 89 ~N~l-------------------------~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 89 ANNL-------------------------LYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp ETTC-------------------------CEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCE
T ss_pred CCcc-------------------------cccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccccccc
Confidence 4444 434444444444555555555544433333344444444444433 33443
Q ss_pred CCChhccCCC-CCCeeeccccccCCCCCccccCCCCCCEEEcc
Q 048205 186 EIPEELGNLA-ELEKLQLQNNFLTGTIPPSIFNLSSLSDLELS 227 (1027)
Q Consensus 186 ~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 227 (1027)
+.+..|..+. .++.|+|++|+|+ .+|...+...+|+.|+++
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~ 185 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLS 185 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECT
T ss_pred ccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhc
Confidence 3333343332 3444555555554 233333333444455544
No 346
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4.2e-21 Score=205.06 Aligned_cols=179 Identities=24% Similarity=0.251 Sum_probs=140.0
Q ss_pred CCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEcc
Q 048205 3 NLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQ 82 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 82 (1027)
..++++++++.++ .+|..+. +++++|+|++|.+++..+..++.+++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4688999999999 5776665 789999999999998888899999999999999999998888889999999999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD 162 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (1027)
+|++++..+..|..+++|++|+|++|+++ .++...+..+++|++|+|++|++++..+..|..+++|++|+|++|.+++.
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLK-SLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCC-CcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999877788889999999999999887 45555556666666666666666655555566666666666666666555
Q ss_pred cCccccCCCCCcEEEccCccCCC
Q 048205 163 IPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 163 ~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
.+..|..+++|++|+|++|.+++
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 45555555556666666555553
No 347
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.2e-22 Score=218.03 Aligned_cols=152 Identities=16% Similarity=0.113 Sum_probs=121.8
Q ss_pred HHHHHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccc------------------hhHHHHHHHHHHHhhcc
Q 048205 743 LELFQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYG------------------RAIKSFDIECGMIKRIR 804 (1027)
Q Consensus 743 ~~~~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~e~~~l~~l~ 804 (1027)
.........|+..+.||+|+||.||+|++.+|+.||||+++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344455566778899999999999999997799999999864321 13456889999999999
Q ss_pred CCccceEEeEEecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEc
Q 048205 805 HRNIIKFISSCSSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLD 884 (1027)
Q Consensus 805 h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~ 884 (1027)
| +++++++.. +..++||||++||+|.+ +.. .....++.|+++|++||| +.||+||||||+||+++
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 4 566665544 45699999999999988 422 124469999999999999 99999999999999999
Q ss_pred CCCcEEEeeecCCcccccCCCcceecccccCccccCccccc
Q 048205 885 DNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGR 925 (1027)
Q Consensus 885 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 925 (1027)
++.+||+|||+|+. +..|+|||++.
T Consensus 228 -~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp -TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred -CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 99999999999872 23478899765
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=3.4e-21 Score=212.32 Aligned_cols=197 Identities=24% Similarity=0.304 Sum_probs=171.6
Q ss_pred CCCCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEE
Q 048205 1 LSNLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELW 80 (1027)
Q Consensus 1 l~~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~ 80 (1027)
+++|++|++++|.++. ++ .+..+++|++|+|++|.+++ ++. +..+++|++|+|++|++++ ++ .+..+++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 3579999999999985 45 68999999999999999995 454 9999999999999999984 44 699999999999
Q ss_pred ccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccc
Q 048205 81 LQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFS 160 (1027)
Q Consensus 81 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 160 (1027)
+++|++++. + .+..+++|++|++++|++++. +. +..+++|++|++++|++++..+ +..+++|+.|++++|.++
T Consensus 114 l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~-~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 114 LTSTQITDV-T-PLAGLSNLQVLYLDLNQITNI-SP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCC-GG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCCc-h-hhcCCCCCCEEECCCCccCcC-cc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccC
Confidence 999999964 4 399999999999999999853 33 7889999999999999996544 999999999999999998
Q ss_pred cccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccc
Q 048205 161 GDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSI 215 (1027)
Q Consensus 161 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 215 (1027)
+..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.+++ .|..+
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~-~~~~~ 236 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN-QPVFY 236 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC-CCEEC
T ss_pred cChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec-CCeee
Confidence 6543 899999999999999999655 38999999999999999984 44433
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.8e-21 Score=217.34 Aligned_cols=206 Identities=20% Similarity=0.235 Sum_probs=129.5
Q ss_pred cEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccc
Q 048205 174 KYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKF 253 (1027)
Q Consensus 174 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~ 253 (1027)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+ .+|..
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~--------------~i~~~- 73 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLE--------------VIEAD- 73 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCC--------------EECTT-
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCC--------------ccChh-
Confidence 34555666665 344433 2355555666665553333445555555555555555531 12222
Q ss_pred cCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccc-eeccCccccccCCccccCcCcccceeccCcccccccC
Q 048205 254 CNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEK-LDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVP 332 (1027)
Q Consensus 254 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 332 (1027)
.|.++++++. +.+++|+|+.+.|..|..+++|++|++++|++..+.+
T Consensus 74 --------------------------------~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~ 121 (350)
T 4ay9_X 74 --------------------------------VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 121 (350)
T ss_dssp --------------------------------SBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC
T ss_pred --------------------------------HhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCc
Confidence 2344555443 4555667776777777777777777777777777766
Q ss_pred ccccccCCcceEEccCccccccCCCCccCCCC-CccEEEccccccCCcCcccccCCCCCCeeecCC-CcccCCCCcccCC
Q 048205 333 TTIFNVSTLKFLYLGSNSFFGRLPSSADVRLP-NLEELSLSGNNFSGTIPSFIFNTSKLSTLELQR-NSFSGFIPNTFGN 410 (1027)
Q Consensus 333 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~ 410 (1027)
..+....++..|++.++.-...++...+..+. .+++|+|++|+|+ .+|...+...+|++|++++ |.++.+.++.|.+
T Consensus 122 ~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~ 200 (350)
T 4ay9_X 122 VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHG 200 (350)
T ss_dssp CTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTT
T ss_pred hhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhcc
Confidence 66666777777777654333456655554443 5778888888887 4555555667788888864 6676666667888
Q ss_pred cccccEEecCCCCCCCCCCc
Q 048205 411 LRNLKWLDLGDNYLTSSTSE 430 (1027)
Q Consensus 411 l~~L~~L~L~~N~l~~~~~~ 430 (1027)
+++|++|||++|+|+++|..
T Consensus 201 l~~L~~LdLs~N~l~~lp~~ 220 (350)
T 4ay9_X 201 ASGPVILDISRTRIHSLPSY 220 (350)
T ss_dssp EECCSEEECTTSCCCCCCSS
T ss_pred CcccchhhcCCCCcCccChh
Confidence 88888888888888877764
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1e-21 Score=231.90 Aligned_cols=189 Identities=24% Similarity=0.298 Sum_probs=140.9
Q ss_pred CCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcccccc
Q 048205 389 KLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQSME 468 (1027)
Q Consensus 389 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~~l~ 468 (1027)
+|+.|+|++|++++ +|..+ .++|++|+|++|+|+.+| . .+++|++|+|++|+|++++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~ip-~-------~l~~L~~L~Ls~N~l~~ip------------ 116 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISLP-E-------LPASLEYLDACDNRLSTLP------------ 116 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCCC-C-------CCTTCCEEECCSSCCSCCC------------
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcccc-c-------ccCCCCEEEccCCCCCCcc------------
Confidence 88888998888886 55544 377888888888888776 2 2467888888888777533
Q ss_pred eeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccc
Q 048205 469 DFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWN 548 (1027)
Q Consensus 469 ~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~ 548 (1027)
. +.+ +|++|+|++|++++ +|. .+++|+.|+|++|+|++ +|. .
T Consensus 117 --------------~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--------------lp~---~ 158 (571)
T 3cvr_A 117 --------------E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM--------------LPE---L 158 (571)
T ss_dssp --------------C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--------------CCC---C
T ss_pred --------------h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc--------------CCC---c
Confidence 2 222 56666666666665 443 56777777777777742 333 3
Q ss_pred cCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccc-------cEEEccCCccccCcccccccc
Q 048205 549 LKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDL-------QYLFLKYNRLQGSIPDSIGDM 621 (1027)
Q Consensus 549 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L-------~~L~L~~N~l~g~ip~~~~~l 621 (1027)
+++|++|+|++|.+++ +|. ++ ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .||..++.+
T Consensus 159 l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l 229 (571)
T 3cvr_A 159 PTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSL 229 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGS
T ss_pred CCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcC
Confidence 5677888888888876 676 65 78888888888887 6777 655 67 99999999999 699999999
Q ss_pred ccccccccccccccCCchhhhhcccC
Q 048205 622 INLKSLNLSNNNLFGIIPISLEKLLD 647 (1027)
Q Consensus 622 ~~L~~L~l~~N~l~~~~p~~l~~l~~ 647 (1027)
++|+.|+|++|+|++.+|..+..++.
T Consensus 230 ~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 230 DPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 99999999999999999999888765
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=4.9e-21 Score=226.17 Aligned_cols=189 Identities=25% Similarity=0.327 Sum_probs=148.2
Q ss_pred CccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccE
Q 048205 365 NLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEY 444 (1027)
Q Consensus 365 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~ 444 (1027)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+. +| ..+++|++|+|++|+|+.+|. +. .+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~ip~-l~-------~~L~~ 124 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLSTLPE-LP-------ASLKH 124 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC-CC-------TTCCE
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCCcch-hh-------cCCCE
Confidence 89999999999986 777663 789999999999994 56 458999999999999999887 33 18999
Q ss_pred eeccCCCCCCCCCccccCcccccceeecCCCccccccCcccccccccceEEecCccccCchhHhhhcccccceeeccCce
Q 048205 445 FSISNNPLGGILPRVIGNLSQSMEDFHMPNSNISGSIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQ 524 (1027)
Q Consensus 445 L~Ls~N~l~~~~~~~~~~l~~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 524 (1027)
|+|++|+|+++++ .+++|+.|+|++|++++ +|. .+++|++|+|++|+
T Consensus 125 L~Ls~N~l~~lp~-----------------------------~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 125 LDVDNNQLTMLPE-----------------------------LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EECCSSCCSCCCC-----------------------------CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EECCCCcCCCCCC-----------------------------cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 9999998875332 34566777777777765 443 46677788888877
Q ss_pred eecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccc-------cEEcccccccccccchhhccC
Q 048205 525 LEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVL-------VQIDLSINNFSDVIPTTIGGL 597 (1027)
Q Consensus 525 l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~ls~n~l~~~~p~~~~~l 597 (1027)
|++ +|. +. ++|+.|+|++|.++ .+|. +.. +| +.|+|++|+|+ .+|..++.+
T Consensus 172 L~~--------------lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l 229 (571)
T 3cvr_A 172 LTF--------------LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSL 229 (571)
T ss_dssp CSC--------------CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGS
T ss_pred CCC--------------cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcC
Confidence 743 333 33 67888888888888 5676 554 66 99999999998 689999999
Q ss_pred ccccEEEccCCccccCcccccccccc
Q 048205 598 KDLQYLFLKYNRLQGSIPDSIGDMIN 623 (1027)
Q Consensus 598 ~~L~~L~L~~N~l~g~ip~~~~~l~~ 623 (1027)
++|+.|+|++|.|+|.+|..++.++.
T Consensus 230 ~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 230 DPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred CCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 99999999999999999998887765
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.1e-20 Score=191.34 Aligned_cols=181 Identities=22% Similarity=0.252 Sum_probs=128.8
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
+.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666666666 4555443 56777777777777555555677777777777777777555556667777777777777
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIP 188 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 188 (1027)
+++ .++...+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+.+
T Consensus 87 ~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--- 162 (208)
T 2o6s_A 87 QLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--- 162 (208)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC---
T ss_pred cCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec---
Confidence 776 4555566677777777777777776666677778888888888888876666667778888888888887663
Q ss_pred hhccCCCCCCeeeccccccCCCCCccccCCCC
Q 048205 189 EELGNLAELEKLQLQNNFLTGTIPPSIFNLSS 220 (1027)
Q Consensus 189 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 220 (1027)
.+++|++|+++.|+++|.+|..++.++.
T Consensus 163 ----~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 ----TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ----CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ----CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 3457788888888888888877776654
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=4.5e-20 Score=191.05 Aligned_cols=181 Identities=23% Similarity=0.321 Sum_probs=143.7
Q ss_pred cEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCC
Q 048205 261 EEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVST 340 (1027)
Q Consensus 261 ~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 340 (1027)
+.++.+++.++ .+|..+ .++|++|++++|+++++.+..|..+++|++|++++|+++++.+..|.++++
T Consensus 10 ~~v~c~~~~l~----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 77 (208)
T 2o6s_A 10 TTVECYSQGRT----------SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77 (208)
T ss_dssp TEEECCSSCCS----------SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTT
T ss_pred CEEEecCCCcc----------CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCC
Confidence 45666666665 344433 357888999999988877778888899999999999988887777888888
Q ss_pred cceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecC
Q 048205 341 LKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLG 420 (1027)
Q Consensus 341 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 420 (1027)
|++|++++|++. .++...+..+++|++|+|++|++++..+..|.++++|++|++++|+++++.+..|..+++|++|+++
T Consensus 78 L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 156 (208)
T 2o6s_A 78 LTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156 (208)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred cCEEECCCCcCC-ccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEec
Confidence 999999988886 5566666678889999999999887767678888899999999999988777778888999999999
Q ss_pred CCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCccc
Q 048205 421 DNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLSQ 465 (1027)
Q Consensus 421 ~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 465 (1027)
+|.++. .++.|++|+++.|++++.+|..++.++.
T Consensus 157 ~N~~~~-----------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 157 DNPWDC-----------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp SCCBCC-----------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCeec-----------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 987653 4567788888888888777777666544
No 354
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.79 E-value=1.1e-21 Score=233.17 Aligned_cols=204 Identities=20% Similarity=0.198 Sum_probs=112.6
Q ss_pred cCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccccCcc
Q 048205 385 FNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVIGNLS 464 (1027)
Q Consensus 385 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 464 (1027)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|.. +. .+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~------l~--------~l~--------------------- 389 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWC------LL--------TII--------------------- 389 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHH------HH--------HHH---------------------
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchh------hh--------hHH---------------------
Confidence 45667777777777776 5677777777787777766541 00 000
Q ss_pred cccceeecCCCccccccCcccccccccceEE-ecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccC
Q 048205 465 QSMEDFHMPNSNISGSIPKEINNLTNLIAIY-LGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIP 543 (1027)
Q Consensus 465 ~~l~~l~l~~n~~~~~~p~~~~~l~~L~~L~-L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p 543 (1027)
.. +..+++.+.+|..++++++|+.|+ ++.|.+. +|+.+.+++|.+++ +|
T Consensus 390 ~l-----l~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-----------~L~~l~l~~n~i~~--------------l~ 439 (567)
T 1dce_A 390 LL-----MRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-----------DLRSKFLLENSVLK--------------ME 439 (567)
T ss_dssp HH-----HHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-----------HHHHHHHHHHHHHH--------------HH
T ss_pred HH-----HHhcccccCCHHHHHHHHhcccCcchhhcccc-----------hhhhhhhhcccccc--------------cC
Confidence 00 001113345566666666666666 5554432 33344444444421 11
Q ss_pred ccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccc
Q 048205 544 STLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMIN 623 (1027)
Q Consensus 544 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~ 623 (1027)
. ..|+.|+|++|.+++ +|. ++.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .++.+++
T Consensus 440 ~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~ 509 (567)
T 1dce_A 440 Y-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPR 509 (567)
T ss_dssp H-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSS
T ss_pred c-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCC
Confidence 1 125555555555554 454 555566666666666665 455556666666666666666653 55 5556666
Q ss_pred ccccccccccccCCc-hhhhhcccCCcceeccCCCCCCCCCC
Q 048205 624 LKSLNLSNNNLFGII-PISLEKLLDLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 624 L~~L~l~~N~l~~~~-p~~l~~l~~L~~l~l~~N~l~g~~p~ 664 (1027)
|+.|+|++|+|++.+ |..++.+++|+.|++++|++++.+|.
T Consensus 510 L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 510 LQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 666666666665554 55566666666666666666555543
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.8e-19 Score=215.39 Aligned_cols=170 Identities=25% Similarity=0.372 Sum_probs=81.5
Q ss_pred ccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcE
Q 048205 48 NVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQT 127 (1027)
Q Consensus 48 ~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~ 127 (1027)
.+++|+.|++++|.|+ .++ .+..+++|+.|+|++|++++..| +..+++|+.|+|++|++++ ++ .+..+++|++
T Consensus 41 ~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~--~l~~l~~L~~ 113 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS--SLKDLKKLKS 113 (605)
T ss_dssp HHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT--TSTTCTTCCE
T ss_pred cCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch--hhccCCCCCE
Confidence 3444444444444443 222 24444444444444444443222 4444444444444444442 11 2334444444
Q ss_pred EEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeecccccc
Q 048205 128 LFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFL 207 (1027)
Q Consensus 128 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 207 (1027)
|+|++|++.+. +.+..+++|+.|+|++|.+++. ..|..+++|+.|+|++|++++..| +..+++|+.|+|++|+|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 44444444432 2355555555555555555532 345555555555555555554433 55555555555555555
Q ss_pred CCCCCccccCCCCCCEEEccCccCC
Q 048205 208 TGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 208 ~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
++. +.+..+++|+.|+|++|.++
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCC--hHHccCCCCCEEEccCCcCc
Confidence 532 24555555555555555554
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=8.6e-19 Score=191.23 Aligned_cols=186 Identities=24% Similarity=0.355 Sum_probs=108.9
Q ss_pred EEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCccc
Q 048205 30 NISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNN 109 (1027)
Q Consensus 30 ~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 109 (1027)
.+.+..+.+++.. .+..+++|+.|++++|.++ .++ .+..+++|++|+|++|++++..+ +..+++|++|++++|+
T Consensus 28 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~ 101 (291)
T 1h6t_A 28 KDNLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENK 101 (291)
T ss_dssp HHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred HHHhcCCCccccc--chhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCc
Confidence 3344444444321 2345566666666666665 233 25566666666666666664333 6666666666666666
Q ss_pred ccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCCh
Q 048205 110 LTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPE 189 (1027)
Q Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 189 (1027)
+++ ++ .+..+++|++|++++|++++. +.+..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+
T Consensus 102 l~~-~~--~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~- 173 (291)
T 1h6t_A 102 VKD-LS--SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 173 (291)
T ss_dssp CCC-GG--GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred CCC-Ch--hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-
Confidence 653 22 245556666666666666543 3466666666666666666643 456666666666666666665433
Q ss_pred hccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 190 ELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 190 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
+..+++|++|++++|.|++ ++ .+..+++|+.|++++|+++
T Consensus 174 -l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred -hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCccc
Confidence 6666666666666666664 23 3666666666666666665
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=3.9e-19 Score=193.99 Aligned_cols=186 Identities=28% Similarity=0.390 Sum_probs=159.8
Q ss_pred EecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCccc
Q 048205 7 LFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFL 86 (1027)
Q Consensus 7 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l 86 (1027)
+.+..+.+++..+ +..+++|++|++++|.++ .++ .+..+++|++|+|++|++++. +. +..+++|++|++++|.+
T Consensus 29 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~-~~-l~~l~~L~~L~l~~n~l 102 (291)
T 1h6t_A 29 DNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDI-KP-LANLKNLGWLFLDENKV 102 (291)
T ss_dssp HHTTCSCTTSEEC--HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCC
T ss_pred HHhcCCCcccccc--hhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCC-cc-cccCCCCCEEECCCCcC
Confidence 3456666665433 567899999999999998 455 489999999999999999854 44 99999999999999999
Q ss_pred CCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCcc
Q 048205 87 TGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKE 166 (1027)
Q Consensus 87 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 166 (1027)
++ ++ .+..+++|++|++++|++++ + ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+
T Consensus 103 ~~-~~-~l~~l~~L~~L~L~~n~i~~-~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-- 173 (291)
T 1h6t_A 103 KD-LS-SLKDLKKLKSLSLEHNGISD-I--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-- 173 (291)
T ss_dssp CC-GG-GGTTCTTCCEEECTTSCCCC-C--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred CC-Ch-hhccCCCCCEEECCCCcCCC-C--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--
Confidence 85 33 49999999999999999985 3 3577899999999999999976 689999999999999999996554
Q ss_pred ccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCC
Q 048205 167 IGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTG 209 (1027)
Q Consensus 167 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 209 (1027)
+..+++|++|+|++|++++. + .+..+++|+.|++++|.++.
T Consensus 174 l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 99999999999999999964 4 48999999999999999985
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.4e-19 Score=198.86 Aligned_cols=176 Identities=24% Similarity=0.208 Sum_probs=101.1
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCccccc-CCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELG-NLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
+.++++++.++ .+|..+. ..++.|+|++|+|++..+..|. .+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56677777766 4665554 3466667777766655555565 666666666666666655555666666666666666
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
|+|+ ...+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|++..
T Consensus 98 N~l~-------------------------~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 NHLH-------------------------TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCC-------------------------EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCC-------------------------cCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 6665 333444455555555555555555444555555555555555555555433
Q ss_pred Chhc---cCCCCCCeeeccccccCCCCCccccCCCC--CCEEEccCccCC
Q 048205 188 PEEL---GNLAELEKLQLQNNFLTGTIPPSIFNLSS--LSDLELSFNSLT 232 (1027)
Q Consensus 188 p~~~---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 232 (1027)
+..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 3333 34556666666666666444445555554 366777777664
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=8.9e-19 Score=209.41 Aligned_cols=185 Identities=29% Similarity=0.413 Sum_probs=99.0
Q ss_pred ecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccC
Q 048205 8 FLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLT 87 (1027)
Q Consensus 8 ~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~ 87 (1027)
.+..+.+.+.++ +..+++|+.|+|++|.+. .+| .+..+++|+.|+|++|+|++..| +..+++|+.|+|++|.++
T Consensus 27 ~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~ 100 (605)
T 1m9s_A 27 NLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIK 100 (605)
T ss_dssp HTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred hccCCCcccccc--hhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCC
Confidence 344444443322 345555555666655555 233 35555566666666665553322 555555666666666555
Q ss_pred CccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccc
Q 048205 88 GTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEI 167 (1027)
Q Consensus 88 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 167 (1027)
+ +| .+..+++|++|+|++|++++ + ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|++..| +
T Consensus 101 ~-l~-~l~~l~~L~~L~Ls~N~l~~-l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l 171 (605)
T 1m9s_A 101 D-LS-SLKDLKKLKSLSLEHNGISD-I--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L 171 (605)
T ss_dssp C-CT-TSTTCTTCCEEECTTSCCCC-C--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G
T ss_pred C-Ch-hhccCCCCCEEEecCCCCCC-C--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--h
Confidence 3 22 45555556666666665553 2 2244555566666666655543 455555566666666665554433 5
Q ss_pred cCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCC
Q 048205 168 GNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTG 209 (1027)
Q Consensus 168 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 209 (1027)
..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.+.+
T Consensus 172 ~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 172 AGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp TTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred ccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 5555666666666655542 245555556666666665553
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.6e-18 Score=180.67 Aligned_cols=152 Identities=24% Similarity=0.290 Sum_probs=92.5
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
+.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 56777777777 5666554 56777777777777666667777777777777777777666777777777777777777
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQ 184 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 184 (1027)
+|+ .++...|.++++|++|+|++|+|++..+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|.+.
T Consensus 91 ~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 91 KIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 776 444444555555555555555555444445555555555555555554444444444444444444444443
No 361
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=180.42 Aligned_cols=153 Identities=24% Similarity=0.244 Sum_probs=104.3
Q ss_pred EEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCC
Q 048205 78 ELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSIN 157 (1027)
Q Consensus 78 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 157 (1027)
.+++++|.++ .+|..+. ..+++|+|++|++++..+...+..+++|++|+|++|+|+++.+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555554 3343332 234556666666553333444555666666666666666666667777777777777777
Q ss_pred ccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCC
Q 048205 158 DFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTG 233 (1027)
Q Consensus 158 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 233 (1027)
.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 7776666677777777788888887777777777777888888888888877767777788888888888887764
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.6e-18 Score=180.68 Aligned_cols=154 Identities=20% Similarity=0.262 Sum_probs=133.7
Q ss_pred cEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCC
Q 048205 261 EEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVST 340 (1027)
Q Consensus 261 ~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 340 (1027)
+.++.++|.++ .+|..+. ++|+.|+|++|+|+++.+..|..+++|+.|+|++|+|+++.|..|.++++
T Consensus 14 ~~v~c~~~~l~----------~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~ 81 (220)
T 2v9t_B 14 NIVDCRGKGLT----------EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRS 81 (220)
T ss_dssp TEEECTTSCCS----------SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSS
T ss_pred CEEEcCCCCcC----------cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcC
Confidence 56777777776 4555443 68899999999999888889999999999999999999998999999999
Q ss_pred cceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecC
Q 048205 341 LKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLG 420 (1027)
Q Consensus 341 L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 420 (1027)
|++|+|++|++. .+|...+..+++|++|+|++|++++..|..|.++++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 82 L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 160 (220)
T 2v9t_B 82 LNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLA 160 (220)
T ss_dssp CCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeC
Confidence 999999999996 6777777788999999999999998888889999999999999999998888889999999999999
Q ss_pred CCCCCCC
Q 048205 421 DNYLTSS 427 (1027)
Q Consensus 421 ~N~l~~~ 427 (1027)
+|+++..
T Consensus 161 ~N~~~c~ 167 (220)
T 2v9t_B 161 QNPFICD 167 (220)
T ss_dssp SSCEECS
T ss_pred CCCcCCC
Confidence 9987653
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=3.9e-18 Score=177.71 Aligned_cols=153 Identities=20% Similarity=0.222 Sum_probs=84.9
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCc-ccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIP-EELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSV 107 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 107 (1027)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..+ ..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35566666655 3554443 334555555555554433 2345555555555555555544444555555555555555
Q ss_pred ccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCC
Q 048205 108 NNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEI 187 (1027)
Q Consensus 108 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 187 (1027)
|+++ +..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|++++..
T Consensus 91 N~l~-------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 145 (220)
T 2v70_A 91 NRLE-------------------------NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVA 145 (220)
T ss_dssp SCCC-------------------------CCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBC
T ss_pred CccC-------------------------ccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEEC
Confidence 5554 444455555556666666666665555555666666666666666666555
Q ss_pred ChhccCCCCCCeeeccccccCC
Q 048205 188 PEELGNLAELEKLQLQNNFLTG 209 (1027)
Q Consensus 188 p~~~~~l~~L~~L~L~~N~l~~ 209 (1027)
|..|..+++|++|+|++|.+..
T Consensus 146 ~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 146 PGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTTTTTCTTCCEEECCSCCEEC
T ss_pred HHHhcCCCCCCEEEecCcCCcC
Confidence 5666666666666666666654
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.8e-20 Score=222.75 Aligned_cols=171 Identities=18% Similarity=0.188 Sum_probs=136.8
Q ss_pred ccCcccccccccceEEecCcc-------------ccCchhHhhhcccccceee-ccCceeecccCCCCCccccccccCcc
Q 048205 480 SIPKEINNLTNLIAIYLGVNK-------------LNGSILIALGKLKKLQLLS-LKDNQLEGSIPDNLSFSCTLTSIPST 545 (1027)
Q Consensus 480 ~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l~g~~p~~~~~~~~~~~~p~~ 545 (1027)
.+|..++++++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|++
T Consensus 363 ~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-------------------- 422 (567)
T 1dce_A 363 VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-------------------- 422 (567)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--------------------
T ss_pred hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--------------------
Confidence 566777777777777776664 5667777888888888887 666654
Q ss_pred ccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccc
Q 048205 546 LWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLK 625 (1027)
Q Consensus 546 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~ 625 (1027)
.+|..+.+++|.+++ +|. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+.+++|+
T Consensus 423 ----~~L~~l~l~~n~i~~-l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 489 (567)
T 1dce_A 423 ----DDLRSKFLLENSVLK-MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLE 489 (567)
T ss_dssp ----HHHHHHHHHHHHHHH-HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCC
T ss_pred ----chhhhhhhhcccccc-cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCC
Confidence 234555667777775 332 248999999999996 787 999999999999999999 8999999999999
Q ss_pred ccccccccccCCchhhhhcccCCcceeccCCCCCCCC-CC-CCCCCCcccccccCCccccCCC
Q 048205 626 SLNLSNNNLFGIIPISLEKLLDLKDINVSFNKLEGEI-PR-EGPFRNFSLESFKGNELLCGMP 686 (1027)
Q Consensus 626 ~L~l~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~-p~-~~~~~~~~~~~~~~n~~l~g~~ 686 (1027)
.|+|++|+|++ +| .++.+++|+.|+|++|++++.+ |. -+.+.++......+|+ +++.|
T Consensus 490 ~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~-l~~~~ 549 (567)
T 1dce_A 490 VLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNS-LCQEE 549 (567)
T ss_dssp EEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSG-GGGSS
T ss_pred EEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCc-CCCCc
Confidence 99999999997 77 8999999999999999999996 64 3456666666777884 55544
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=1.7e-18 Score=195.43 Aligned_cols=177 Identities=28% Similarity=0.285 Sum_probs=139.3
Q ss_pred CEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhc-CCCCCcEEEccCCcCCccCcccccCCCCCcEEEcc
Q 048205 77 EELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICS-NLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLS 155 (1027)
Q Consensus 77 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 155 (1027)
+.+++++|.++ .+|..+. ..++.|+|++|+|+ .++...+. .+++|++|+|++|+|+++.+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~-~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCC-EECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCC-ccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 45666666665 3454443 34666777777666 34444554 67777777777777777788889999999999999
Q ss_pred CCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccc---cCCCCCCEEEccCccCC
Q 048205 156 INDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSI---FNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 156 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~ 232 (1027)
+|.|++..+..|.++++|++|+|++|+|+++.|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998888889999999999999999998889999999999999999999996544455 57999999999999998
Q ss_pred CCCCcchhhhhhccccCCccccCCCcc--ccEEEeccccccc
Q 048205 233 GNFPKDMHIVNRLSAELPAKFCNNIPF--LEEIYLSKNMFYG 272 (1027)
Q Consensus 233 ~~~p~~~~~~~~~~~~l~~~~~~~l~~--L~~L~Ls~N~l~~ 272 (1027)
.+|...+..++. ++.|+|++|.+..
T Consensus 177 ---------------~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 ---------------KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ---------------CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ---------------ccCHHHhhhccHhhcceEEecCCCccC
Confidence 444445555665 5899999999994
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.2e-19 Score=220.26 Aligned_cols=155 Identities=21% Similarity=0.250 Sum_probs=75.8
Q ss_pred ccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccC
Q 048205 486 NNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGP 565 (1027)
Q Consensus 486 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 565 (1027)
.++++|++|+|++|+|+ .+|..|++|++|++|+|++|+|+ .+|..++++++|++|+|++|.++ .
T Consensus 244 ~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~--------------~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 244 FKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT--------------SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp GGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS--------------SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred cCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC--------------ccChhhcCCCCCCEEECCCCCCC-c
Confidence 34445555555555555 45555666666666666666652 44555666666666666666665 4
Q ss_pred ccccccCcccccEEcccccccccccchhhccCcc-ccEEEccCCccccCccccccccccccccccccc--------cccC
Q 048205 566 LPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKD-LQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNN--------NLFG 636 (1027)
Q Consensus 566 ~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~-L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N--------~l~~ 636 (1027)
+|..|+.+++|+.|+|++|.|++.+|..++.+.. +..|+|++|.++|.+|.+ |+.|++++| .|.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 6666777777777777777777777776655422 234677777777777654 345556655 4444
Q ss_pred CchhhhhcccCCcceeccCCCCCCCC
Q 048205 637 IIPISLEKLLDLKDINVSFNKLEGEI 662 (1027)
Q Consensus 637 ~~p~~l~~l~~L~~l~l~~N~l~g~~ 662 (1027)
.++..+.++..+....+++|.+.+..
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~~~~ 407 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLCQHY 407 (727)
T ss_dssp --------------------CCCGGG
T ss_pred cccchhhcccccceeeeecccccccc
Confidence 44445556666666677777766443
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=9.7e-18 Score=175.97 Aligned_cols=156 Identities=24% Similarity=0.267 Sum_probs=131.0
Q ss_pred ccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccC
Q 048205 260 LEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVS 339 (1027)
Q Consensus 260 L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 339 (1027)
.+.++.+++.++ .+|..+. ++|++|+|++|+|+++.|..|..+++|+.|+|++|+|..+.+..|.+++
T Consensus 21 ~~~v~c~~~~l~----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 88 (229)
T 3e6j_A 21 GTTVDCRSKRHA----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLT 88 (229)
T ss_dssp TTEEECTTSCCS----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCEeEccCCCcC----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCC
Confidence 456777777776 4554443 7889999999999988888899999999999999999888888888899
Q ss_pred CcceEEccCccccccCCCCccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEec
Q 048205 340 TLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDL 419 (1027)
Q Consensus 340 ~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 419 (1027)
+|++|+|++|++. .++...+..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|+++.+..|..+++|+.|+|
T Consensus 89 ~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 166 (229)
T 3e6j_A 89 QLTVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL 166 (229)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CcCEEECCCCcCC-ccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEe
Confidence 9999999999886 566666678899999999999998 77888889999999999999999887788899999999999
Q ss_pred CCCCCCCCCC
Q 048205 420 GDNYLTSSTS 429 (1027)
Q Consensus 420 ~~N~l~~~~~ 429 (1027)
++|+++....
T Consensus 167 ~~N~~~c~c~ 176 (229)
T 3e6j_A 167 FGNPWDCECR 176 (229)
T ss_dssp TTSCBCTTBG
T ss_pred eCCCccCCcc
Confidence 9998876554
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.5e-18 Score=174.96 Aligned_cols=157 Identities=18% Similarity=0.215 Sum_probs=135.7
Q ss_pred ccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccc
Q 048205 484 EINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFT 563 (1027)
Q Consensus 484 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~ 563 (1027)
..+.+.+|+.|++++|.++ .+| .+..+++|++|++++|+++ .+..+..+++|++|++++|.++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~---------------~~~~l~~l~~L~~L~l~~n~l~ 101 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT---------------NYNPISGLSNLERLRIMGKDVT 101 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS---------------CCGGGTTCTTCCEEEEECTTCB
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC---------------cchhhhcCCCCCEEEeECCccC
Confidence 3477889999999999998 455 6899999999999999763 2346788999999999999999
Q ss_pred cCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhh
Q 048205 564 GPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLE 643 (1027)
Q Consensus 564 ~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 643 (1027)
+..|..++.+++|+.|++++|++++..|..++.+++|++|+|++|++.+.+| .++.+++|++|++++|++++ +| .+.
T Consensus 102 ~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~ 178 (197)
T 4ezg_A 102 SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIE 178 (197)
T ss_dssp GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGG
T ss_pred cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-Hhc
Confidence 8889999999999999999999998889999999999999999998334787 69999999999999999986 44 789
Q ss_pred cccCCcceeccCCCCCC
Q 048205 644 KLLDLKDINVSFNKLEG 660 (1027)
Q Consensus 644 ~l~~L~~l~l~~N~l~g 660 (1027)
.+++|+.|++++|++.+
T Consensus 179 ~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 179 DFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp GCSSCCEEEECBC----
T ss_pred cCCCCCEEEeeCcccCC
Confidence 99999999999999865
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.9e-17 Score=173.82 Aligned_cols=151 Identities=25% Similarity=0.269 Sum_probs=70.0
Q ss_pred EEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCC
Q 048205 54 GLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDEN 133 (1027)
Q Consensus 54 ~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 133 (1027)
.++.++++++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+++
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~---------------------- 77 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG---------------------- 77 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC----------------------
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC----------------------
Confidence 3444444443 3333332 44444555555444444444444444444444444443
Q ss_pred cCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCc
Q 048205 134 NFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPP 213 (1027)
Q Consensus 134 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 213 (1027)
.+.+..|..+++|++|+|++|.|++..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|+|++..+.
T Consensus 78 ---~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~ 153 (229)
T 3e6j_A 78 ---ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHG 153 (229)
T ss_dssp ---CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTT
T ss_pred ---CcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHH
Confidence 222333344444444444444444333333444444444444444444 3444444555555555555555544334
Q ss_pred cccCCCCCCEEEccCccCCC
Q 048205 214 SIFNLSSLSDLELSFNSLTG 233 (1027)
Q Consensus 214 ~~~~l~~L~~L~Ls~N~l~~ 233 (1027)
.|..+++|+.|++++|.+..
T Consensus 154 ~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 154 AFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp TTTTCTTCCEEECTTSCBCT
T ss_pred HHhCCCCCCEEEeeCCCccC
Confidence 45555555555555555543
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=8.1e-19 Score=215.31 Aligned_cols=154 Identities=23% Similarity=0.195 Sum_probs=115.1
Q ss_pred ccCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCC
Q 048205 480 SIPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSL 559 (1027)
Q Consensus 480 ~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~ 559 (1027)
..|..+..+.+|+.|+|++|++. .+|..+.++++|++|+|++|+|+ .+|..++++++|++|+|++
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~--------------~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT--------------ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS--------------CCCGGGGGGTTCCEEECTT
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc--------------ccChhhhCCCCCCEEeCcC
Confidence 45677788888999999999888 67777778899999999998883 5677788888899999999
Q ss_pred CccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccc-ccccccccccccCCc
Q 048205 560 NFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMIN-LKSLNLSNNNLFGII 638 (1027)
Q Consensus 560 N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~-L~~L~l~~N~l~~~~ 638 (1027)
|.|+ .+|..|+.+++|+.|+|++|.|+ .+|.+|+.|++|++|+|++|.|+|.+|..++.+.. +..|+|++|.++|.+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 9888 67888888888999999988886 68888888888999999999998888888766533 345788889888888
Q ss_pred hhhhhcccCCcceeccCC
Q 048205 639 PISLEKLLDLKDINVSFN 656 (1027)
Q Consensus 639 p~~l~~l~~L~~l~l~~N 656 (1027)
|.++. .|+++.|
T Consensus 358 p~~l~------~l~l~~n 369 (727)
T 4b8c_D 358 PHERR------FIEINTD 369 (727)
T ss_dssp CCC---------------
T ss_pred ccccc------eeEeecc
Confidence 86543 4455555
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.73 E-value=1.8e-18 Score=176.22 Aligned_cols=136 Identities=24% Similarity=0.288 Sum_probs=78.6
Q ss_pred cccEEecCCCccccCccc-cccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccccccc
Q 048205 551 DILCLNLSLNFFTGPLPL-EIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNL 629 (1027)
Q Consensus 551 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l 629 (1027)
+++.|++++|.+++..|. .++.+++|+.|+|++|++++..|..|+++++|++|+|++|+|++..|..|+.+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 555666666666553332 2566666666666666666655666666666666666666666555555666666666666
Q ss_pred ccccccCCchhhhhcccCCcceeccCCCCCCCCCCCCCCCCcccccccCCccccCCC
Q 048205 630 SNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIPREGPFRNFSLESFKGNELLCGMP 686 (1027)
Q Consensus 630 ~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~~ 686 (1027)
++|++++.+|..+..+++|+.|++++|++.+..+.......+....+.++...|+.|
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 666666666666666666666666666666655431111111222344555556655
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=3.1e-18 Score=183.74 Aligned_cols=167 Identities=20% Similarity=0.287 Sum_probs=85.9
Q ss_pred CCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeC
Q 048205 26 KRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDL 105 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 105 (1027)
.++..+++++|.+++ ++ .+..+++|++|++++|+|+ .++ .+..+++|++|+|++|++++..+ +..+++|++|++
T Consensus 19 ~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 334444455555542 22 3444555555555555554 233 34444455555555555443222 444444444444
Q ss_pred CcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCC
Q 048205 106 SVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 106 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
++|++ ++..+ +.. ++|++|+|++|.+++. ..+..+++|++|+|++|++++
T Consensus 93 ~~N~l-------------------------~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 93 NRNRL-------------------------KNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp CSSCC-------------------------SCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB
T ss_pred CCCcc-------------------------CCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC
Confidence 44444 43211 111 5566666666666532 245566666666666666654
Q ss_pred CCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCC
Q 048205 186 EIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 186 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
. + .++.+++|++|+|++|++++. ..+..+++|+.|++++|.++
T Consensus 143 ~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 143 I-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred C-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 3 2 455666666666666666644 45666666666666666665
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=1.9e-18 Score=185.46 Aligned_cols=168 Identities=21% Similarity=0.231 Sum_probs=132.9
Q ss_pred CCcEEecCCCcCcccCCccCcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEcc
Q 048205 3 NLEYLFLKSNMFHGKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQ 82 (1027)
Q Consensus 3 ~l~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~ 82 (1027)
+++.+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|++|+|++|+|++. +. +..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECC
Confidence 3566788999998654 5889999999999999998 566 799999999999999999954 44 9999999999999
Q ss_pred CcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccc
Q 048205 83 NNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGD 162 (1027)
Q Consensus 83 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 162 (1027)
+|++++ +|.. .. ++|++|++++|++++ ++ .+..+++|++|++++|++++. + .+..+++|++|+|++|.+++.
T Consensus 94 ~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~--~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 94 RNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD--SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp SSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG--GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCccCC-cCcc-cc-CcccEEEccCCccCC-Ch--hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 999995 4433 33 889999999999984 32 366777788888888887754 2 577777777777777777754
Q ss_pred cCccccCCCCCcEEEccCccCCCC
Q 048205 163 IPKEIGNLTKLKYLHLDQNRLQGE 186 (1027)
Q Consensus 163 ~p~~~~~l~~L~~L~L~~N~l~~~ 186 (1027)
..+..+++|+.|++++|.++..
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEECC
T ss_pred --HHhccCCCCCEEeCCCCcccCC
Confidence 5677777777777777777643
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=7.5e-18 Score=180.19 Aligned_cols=137 Identities=20% Similarity=0.235 Sum_probs=106.6
Q ss_pred CCccceeeccccceEEEEEe-cCCce--EEEEEEecccch------------------------hHHHHHHHHHHHhhcc
Q 048205 752 FSENNLIGRGGFGFVYKARI-QDGME--VAVKVFDLQYGR------------------------AIKSFDIECGMIKRIR 804 (1027)
Q Consensus 752 f~~~~~lG~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l~ 804 (1027)
|++.+.||+|+||.||+|++ .+|+. ||||+++..... ....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999998 68999 999997543111 1136788999999999
Q ss_pred CCcc--ceEEeEEecCCeeEEEEEecCC-C----CHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCC
Q 048205 805 HRNI--IKFISSCSSDDFKALVLEYMPY-G----SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLK 877 (1027)
Q Consensus 805 h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 877 (1027)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.|++|||. +.||+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8864 344432 356899999942 3 67765432 2344567899999999999993 4689999999
Q ss_pred CCcEEEcCCCcEEEeeecCCccc
Q 048205 878 PNNVLLDDNMVAHLSDFGMAKPF 900 (1027)
Q Consensus 878 p~NIll~~~~~~kl~Dfgla~~~ 900 (1027)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999988 9999999999743
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=8.7e-18 Score=187.06 Aligned_cols=81 Identities=11% Similarity=0.079 Sum_probs=47.5
Q ss_pred ccCcCCccceeccCccccccCCccccCcCccc-ceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCC
Q 048205 287 IGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLE-WMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPN 365 (1027)
Q Consensus 287 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~ 365 (1027)
|.++++|+.++|.+| ++.+.+.+|.++.+|+ .+++.+ .++.+.+.+|.++++|+.+++++|++. .++..+|..+++
T Consensus 246 F~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~ 322 (329)
T 3sb4_A 246 FAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVP 322 (329)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCC
T ss_pred hhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcc
Confidence 444555555555555 5555555666666666 666655 555555666666666666666666553 555555666666
Q ss_pred ccEEE
Q 048205 366 LEELS 370 (1027)
Q Consensus 366 L~~L~ 370 (1027)
|+.++
T Consensus 323 L~~ly 327 (329)
T 3sb4_A 323 SKLIY 327 (329)
T ss_dssp CCEEE
T ss_pred hhhhc
Confidence 66654
No 376
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=3.9e-17 Score=167.12 Aligned_cols=155 Identities=19% Similarity=0.238 Sum_probs=132.6
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLS 101 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 101 (1027)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467789999999999998 677 6999999999999999886 345789999999999999999987889999999999
Q ss_pred eEeCCcccccccchhhhhcCCCCCcEEEccCCc-CCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccC
Q 048205 102 NLDLSVNNLTGELLANICSNLPLLQTLFLDENN-FDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQ 180 (1027)
Q Consensus 102 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 180 (1027)
+|++++|++++.. ...+..+++|++|++++|. ++. ++ .+..+++|++|++++|.+++ ++ .+..+++|++|++++
T Consensus 116 ~L~Ls~n~i~~~~-~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSI-LTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGG-HHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHh-HHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 9999999998533 4566789999999999998 664 44 79999999999999999985 44 789999999999999
Q ss_pred ccCCC
Q 048205 181 NRLQG 185 (1027)
Q Consensus 181 N~l~~ 185 (1027)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 99864
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=5.4e-17 Score=165.20 Aligned_cols=175 Identities=21% Similarity=0.235 Sum_probs=115.8
Q ss_pred ceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCc--cccccCcccEEecCCCccccCcccc
Q 048205 492 IAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPS--TLWNLKDILCLNLSLNFFTGPLPLE 569 (1027)
Q Consensus 492 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~--~l~~l~~L~~L~Ls~N~l~~~~p~~ 569 (1027)
+++++++|.++ .+|..+.. +|++|+|++|++++ ++. .+..+++|++|+|++|.+++..|..
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~--------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 73 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGR--------------ISSDGLFGRLPHLVKLELKRNQLTGIEPNA 73 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCS--------------BCCSCSGGGCTTCCEEECCSSCCCCBCTTT
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCc--------------cCCccccccCCCCCEEECCCCCCCCcCHhH
Confidence 44555555554 34443322 66777777777642 222 2566777777777777778777888
Q ss_pred ccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccccccCCchhhhhcccCCc
Q 048205 570 IGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEKLLDLK 649 (1027)
Q Consensus 570 ~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~ 649 (1027)
|+.+++|+.|+|++|++++..|..|+++++|++|+|++|+|++.+|..++.+++|++|+|++|++++..+...- ...++
T Consensus 74 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~-~~~l~ 152 (192)
T 1w8a_A 74 FEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLR 152 (192)
T ss_dssp TTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHH
T ss_pred cCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH-HHHHH
Confidence 88888888999999998887777788889999999999999888888888889999999999999887663210 11122
Q ss_pred ceeccCCCCCCCCCCCCCCCCcccccccCCccccCCC
Q 048205 650 DINVSFNKLEGEIPREGPFRNFSLESFKGNELLCGMP 686 (1027)
Q Consensus 650 ~l~l~~N~l~g~~p~~~~~~~~~~~~~~~n~~l~g~~ 686 (1027)
...+..+.....-|. .++.........+..-|..+
T Consensus 153 ~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 153 KKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp HHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCCC
T ss_pred HcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCCC
Confidence 223333433333333 24444444555555556544
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=1.5e-16 Score=176.99 Aligned_cols=260 Identities=14% Similarity=0.075 Sum_probs=152.1
Q ss_pred CCCCcEEecCCCcCc--ccCCccCcCCCCCcEEEccCCcccccCCccccc--------cCCCcEEEccccccceeCcccc
Q 048205 1 LSNLEYLFLKSNMFH--GKIPSTLSNCKRLRNISLSLNDFSGTIPKEIGN--------VTTLIGLHLRGNKLQGEIPEEL 70 (1027)
Q Consensus 1 l~~l~~L~l~~n~l~--~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~i~~--------l~~L~~L~L~~n~i~~~~p~~l 70 (1027)
+++|++|||++|++. ...+..+ +.++.+.+..|.|. +.+|.. +++|+.|+|.+ +++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 578999999999988 3333223 33566666666444 456666 89999999988 8887777889
Q ss_pred cCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCccccc---ccchhhhhcCCCCCc-EEEccCCcCCccCcccc---
Q 048205 71 GNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLT---GELLANICSNLPLLQ-TLFLDENNFDGKIPSTL--- 143 (1027)
Q Consensus 71 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~---~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~--- 143 (1027)
.++++|++|++++|.+..+.+.+|..+.++..+.++.+... ..+....|.++..|+ .+.+.... .++..+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~ 197 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKA 197 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHT
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhc
Confidence 99999999999999888777788888888887777663320 123334455555665 44443221 111111
Q ss_pred -cCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCC
Q 048205 144 -LRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLS 222 (1027)
Q Consensus 144 -~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 222 (1027)
....+++.+.+.++-...........+++|+.|+|++|+++.+.+..|.++.+|+.|+|.+| ++.+.+.+|.++++|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 12344445544443221111111112456666666666665444455666666666666655 5544445566666666
Q ss_pred -EEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCC-ccccCcCCcccee
Q 048205 223 -DLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIP-KEIGNLAKLEKLD 297 (1027)
Q Consensus 223 -~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p-~~l~~l~~L~~L~ 297 (1027)
.+++.+ .++ .++...|.++++|+.++++.|+++ .++ .+|.++++|+.++
T Consensus 277 ~~l~l~~-~l~---------------~I~~~aF~~c~~L~~l~l~~n~i~----------~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 277 GTLELPA-SVT---------------AIEFGAFMGCDNLRYVLATGDKIT----------TLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEEEECT-TCC---------------EECTTTTTTCTTEEEEEECSSCCC----------EECTTTTCTTCCCCEEE
T ss_pred EEEEEcc-cce---------------EEchhhhhCCccCCEEEeCCCccC----------ccchhhhcCCcchhhhc
Confidence 666655 443 455555666666666666666665 222 2455566666654
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=9.5e-15 Score=165.91 Aligned_cols=263 Identities=16% Similarity=0.159 Sum_probs=140.7
Q ss_pred CCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEE
Q 048205 146 CKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLE 225 (1027)
Q Consensus 146 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 225 (1027)
+..++.+.+.++ ++.+...+|.+. +|+.+.+..| ++.+...+|.+ .+|+.+.+.+ .++.+.+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 345555555532 333444555553 5666666554 44344445555 3466666654 44444445566666666666
Q ss_pred ccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccCccccc
Q 048205 226 LSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQFNRLQC 305 (1027)
Q Consensus 226 Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~N~l~~ 305 (1027)
++.|+++ .++...|. ...| +.+.|.. .++.
T Consensus 187 l~~n~l~---------------~I~~~aF~-~~~L---------------------------------~~l~lp~-~l~~ 216 (401)
T 4fdw_A 187 LSKTKIT---------------KLPASTFV-YAGI---------------------------------EEVLLPV-TLKE 216 (401)
T ss_dssp CTTSCCS---------------EECTTTTT-TCCC---------------------------------SEEECCT-TCCE
T ss_pred cCCCcce---------------EechhhEe-eccc---------------------------------CEEEeCC-chhe
Confidence 6666554 33333333 2334 4444432 2443
Q ss_pred cCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccC-----CcC
Q 048205 306 VIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFS-----GTI 380 (1027)
Q Consensus 306 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~ 380 (1027)
+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+.+ .+ ..++..+|..+++|+.+++.+|.+. ...
T Consensus 217 I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i-~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~ 292 (401)
T 4fdw_A 217 IGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GV-TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIH 292 (401)
T ss_dssp ECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TC-CEECTTTTTTCTTCCEEEEESSCCCCCTTCEEC
T ss_pred ehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-Cc-cEEChhHhhCCCCCCEEEeCCccccCCcccEEC
Confidence 44445555555555555443 44444445544 4555555532 23 2455555555556666666555443 244
Q ss_pred cccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCCCCCCCccc
Q 048205 381 PSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPLGGILPRVI 460 (1027)
Q Consensus 381 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 460 (1027)
+..|.++++|+.++|. |.++.+...+|.++++|+.++|..| ++.+.. ..|.+| .|+.+++++|.+..+.+.+|
T Consensus 293 ~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~----~aF~~~-~L~~l~l~~n~~~~l~~~~F 365 (401)
T 4fdw_A 293 PYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF----SAFNNT-GIKEVKVEGTTPPQVFEKVW 365 (401)
T ss_dssp TTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT----TSSSSS-CCCEEEECCSSCCBCCCSSC
T ss_pred HHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH----HhCCCC-CCCEEEEcCCCCcccccccc
Confidence 4566666677777776 3466566667777777777777544 443332 334566 77777777777766666666
Q ss_pred cCcccccceeecCC
Q 048205 461 GNLSQSMEDFHMPN 474 (1027)
Q Consensus 461 ~~l~~~l~~l~l~~ 474 (1027)
.+++..+..+++..
T Consensus 366 ~~~~~~l~~l~vp~ 379 (401)
T 4fdw_A 366 YGFPDDITVIRVPA 379 (401)
T ss_dssp CCSCTTCCEEEECG
T ss_pred cCCCCCccEEEeCH
Confidence 66554444444433
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.2e-15 Score=151.81 Aligned_cols=133 Identities=23% Similarity=0.195 Sum_probs=76.3
Q ss_pred CCCcEEEccCCccc-ccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEe
Q 048205 26 KRLRNISLSLNDFS-GTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLD 104 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~-~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 104 (1027)
++|++|++++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 45666666666666666666666533 5566666666666666666654555555556666666
Q ss_pred CCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccC---ccccCCCCCcEEEccCc
Q 048205 105 LSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIP---KEIGNLTKLKYLHLDQN 181 (1027)
Q Consensus 105 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N 181 (1027)
+++|++++.... ..+..+++|++|++++|.+++..+ ..|..+++|++|++++|
T Consensus 102 Ls~N~l~~~~~~------------------------~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n 157 (168)
T 2ell_A 102 LSGNKLKDISTL------------------------EPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDR 157 (168)
T ss_dssp CBSSSCCSSGGG------------------------GGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEET
T ss_pred ccCCccCcchhH------------------------HHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCC
Confidence 666655531111 445555555555555555553322 25555556666666665
Q ss_pred cCC
Q 048205 182 RLQ 184 (1027)
Q Consensus 182 ~l~ 184 (1027)
.+.
T Consensus 158 ~~~ 160 (168)
T 2ell_A 158 EDQ 160 (168)
T ss_dssp TSC
T ss_pred Chh
Confidence 555
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=8.2e-16 Score=152.90 Aligned_cols=133 Identities=20% Similarity=0.170 Sum_probs=97.4
Q ss_pred cccceeeccCceee-cccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccc
Q 048205 513 KKLQLLSLKDNQLE-GSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIP 591 (1027)
Q Consensus 513 ~~L~~L~Ls~N~l~-g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p 591 (1027)
++|++|+|++|+++ | .+|..+..+++|++|++++|.+++. ..++.+++|+.|++++|++++.+|
T Consensus 24 ~~L~~L~l~~n~l~~~-------------~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~ 88 (168)
T 2ell_A 24 AAVRELVLDNCKSNDG-------------KIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLD 88 (168)
T ss_dssp TSCSEEECCSCBCBTT-------------BCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCC
T ss_pred ccCCEEECCCCCCChh-------------hHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHH
Confidence 55666666666663 2 3344455666667777777776654 667778888888888888887677
Q ss_pred hhhccCccccEEEccCCccccCcc--ccccccccccccccccccccCCch---hhhhcccCCcceeccCCCCCCC
Q 048205 592 TTIGGLKDLQYLFLKYNRLQGSIP--DSIGDMINLKSLNLSNNNLFGIIP---ISLEKLLDLKDINVSFNKLEGE 661 (1027)
Q Consensus 592 ~~~~~l~~L~~L~L~~N~l~g~ip--~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~l~l~~N~l~g~ 661 (1027)
..++.+++|++|+|++|++++ +| ..++.+++|++|+|++|++++..+ ..+..+++|+.|++++|.+...
T Consensus 89 ~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 89 MLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp HHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred HHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 777778888888888888884 44 677888888888888888886655 4778888888888888887643
No 382
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.5e-16 Score=175.84 Aligned_cols=137 Identities=14% Similarity=0.098 Sum_probs=100.9
Q ss_pred CCCccceeeccccceEEEEEecCCceEEEEEEecccch------------------h----HHHHHHHHHHHhhccCCcc
Q 048205 751 GFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGR------------------A----IKSFDIECGMIKRIRHRNI 808 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~------------------~----~~~~~~e~~~l~~l~h~ni 808 (1027)
=|++.+.||+|++|.||+|+..+|+.||||+++..... . ......|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 38999999999999999999999999999997532100 0 0112346677777765544
Q ss_pred ceEEeEEecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCC-
Q 048205 809 IKFISSCSSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNM- 887 (1027)
Q Consensus 809 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~- 887 (1027)
....-+... ..++||||++|+++.++... .....++.|++.++.||| +.|||||||||.|||++++|
T Consensus 176 ~vp~p~~~~--~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 176 PVPEPIAQS--RHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp SCCCEEEEE--TTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEEC
T ss_pred CCCeeeecc--CceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCC
Confidence 322111111 23799999999888764321 123568899999999999 89999999999999998776
Q ss_pred ---------cEEEeeecCCcc
Q 048205 888 ---------VAHLSDFGMAKP 899 (1027)
Q Consensus 888 ---------~~kl~Dfgla~~ 899 (1027)
.+.|+||+-+..
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEE
T ss_pred cccccccccceEEEEeCCccc
Confidence 389999998764
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=2e-14 Score=163.20 Aligned_cols=269 Identities=12% Similarity=0.154 Sum_probs=196.2
Q ss_pred cCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEE
Q 048205 49 VTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTL 128 (1027)
Q Consensus 49 l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L 128 (1027)
...++.+.+.++ ++.....+|.++ +|+.+.+..| ++.+...+|.+ .+|+.+.+.. .++ .+....|.++++|+.+
T Consensus 112 ~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLE-QLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCC-EECSSTTTTCTTCCEE
T ss_pred cCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-Ccc-EehHHHhhCcccCCee
Confidence 456666666543 454556667764 6888887766 66555666666 4688888775 554 5666777788888888
Q ss_pred EccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccC
Q 048205 129 FLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLT 208 (1027)
Q Consensus 129 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 208 (1027)
++.+|+++.+...+|. ..+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 8888888766667776 478888888744 66566777888888888888765 55455567777 77888888 45566
Q ss_pred CCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCC-Cccc
Q 048205 209 GTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTI-PKEI 287 (1027)
Q Consensus 209 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~-p~~l 287 (1027)
.+...+|.++++|+.+++.+|.+... ....++...|..+++|+.+++.+ .++ .+ ..+|
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~----------~~~~I~~~aF~~c~~L~~l~l~~-~i~----------~I~~~aF 319 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDD----------PEAMIHPYCLEGCPKLARFEIPE-SIR----------ILGQGLL 319 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCC----------TTCEECTTTTTTCTTCCEECCCT-TCC----------EECTTTT
T ss_pred EEChhHhhCCCCCCEEEeCCccccCC----------cccEECHHHhhCCccCCeEEeCC-ceE----------EEhhhhh
Confidence 56667888888888888888776410 01246777888888888888884 354 22 2357
Q ss_pred cCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccC-CcceEEccCccc
Q 048205 288 GNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVS-TLKFLYLGSNSF 351 (1027)
Q Consensus 288 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~l 351 (1027)
.++++|+.++|..| ++.+...+|.++ +|+.+++++|.+..+.+..|.+++ +++.|++..+.+
T Consensus 320 ~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 320 GGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred cCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 77889999999554 777888899999 999999999999988888898884 788999988765
No 384
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.61 E-value=1.9e-14 Score=164.25 Aligned_cols=335 Identities=12% Similarity=0.056 Sum_probs=217.8
Q ss_pred ccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhh
Q 048205 38 FSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLAN 117 (1027)
Q Consensus 38 l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~ 117 (1027)
++.....+|..+.+|+.+.|..+ ++.....+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+..+ +. .+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecce
Confidence 44344556667777777777643 55555666777777777777654 44455566777777777666544 32 34455
Q ss_pred hhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCC
Q 048205 118 ICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAEL 197 (1027)
Q Consensus 118 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 197 (1027)
.|.+...+....... +......+|.++++|+.+.+..+... ....+|.++.+|+.+.+..| ++.+....|.++..|
T Consensus 135 aF~~~~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L 210 (394)
T 4fs7_A 135 AFKGCDFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILL 210 (394)
T ss_dssp TTTTCCCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTC
T ss_pred eeecccccccccCcc--ccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhcccccc
Confidence 565554443333222 22244567777788888887765433 55667777788888887766 443555677777788
Q ss_pred CeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCC
Q 048205 198 EKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSD 277 (1027)
Q Consensus 198 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 277 (1027)
+.+.+..+... +.+.+....+|+.+.+..+. + .+....|.....|+.+.+..+..+
T Consensus 211 ~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~---------------~i~~~~f~~~~~l~~~~~~~~~~~------ 266 (394)
T 4fs7_A 211 ENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-T---------------ELGKSVFYGCTDLESISIQNNKLR------ 266 (394)
T ss_dssp CBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-C---------------EECSSTTTTCSSCCEEEECCTTCE------
T ss_pred ceeecCCCceE--eehhhcccCCCceEEECCCc-e---------------ecccccccccccceeEEcCCCcce------
Confidence 87777766543 23344555677777765332 2 445566677777777777766543
Q ss_pred CCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCC
Q 048205 278 LGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPS 357 (1027)
Q Consensus 278 ~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 357 (1027)
.-...+..+..++.+....+.+ ....|..+.+|+.+.+..+ ++.+...+|.++.+|+.+++.++ + ..++.
T Consensus 267 ----i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v-~~I~~ 336 (394)
T 4fs7_A 267 ----IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V-EEIGK 336 (394)
T ss_dssp ----ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C-CEECT
T ss_pred ----eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c-cEEhH
Confidence 1123455666777777666543 3456777888888888654 66677778888888888888654 3 46777
Q ss_pred CccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEE
Q 048205 358 SADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWL 417 (1027)
Q Consensus 358 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 417 (1027)
.+|..+.+|+.+++..| ++.+-..+|.++++|+.+++..+ ++ .+..+|.++++|+.+
T Consensus 337 ~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 337 RSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred HhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 88888888888888766 65455667888888888888755 33 235678888888765
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=8.4e-16 Score=149.46 Aligned_cols=129 Identities=19% Similarity=0.163 Sum_probs=97.8
Q ss_pred ccccceeeccCceee-cccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEccccccccccc
Q 048205 512 LKKLQLLSLKDNQLE-GSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVI 590 (1027)
Q Consensus 512 l~~L~~L~Ls~N~l~-g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~ 590 (1027)
.++|++|++++|+++ + .+|..+..+++|++|++++|.+++. ..++.+++|+.|++++|++++.+
T Consensus 16 ~~~l~~L~l~~n~l~~~-------------~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~ 80 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEG-------------KLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGL 80 (149)
T ss_dssp GGGCSEEECTTCBCBTT-------------BCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCT
T ss_pred CccCeEEEccCCcCChh-------------HHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchH
Confidence 356666777776664 2 3444555667777777777777764 66778888888888888888778
Q ss_pred chhhccCccccEEEccCCccccC-ccccccccccccccccccccccCCch---hhhhcccCCcceeccC
Q 048205 591 PTTIGGLKDLQYLFLKYNRLQGS-IPDSIGDMINLKSLNLSNNNLFGIIP---ISLEKLLDLKDINVSF 655 (1027)
Q Consensus 591 p~~~~~l~~L~~L~L~~N~l~g~-ip~~~~~l~~L~~L~l~~N~l~~~~p---~~l~~l~~L~~l~l~~ 655 (1027)
|..++.+++|++|++++|++++. .|..++.+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 81 ~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 81 EVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp HHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred HHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888888888888888888852 34788888888889999888887766 5788888888888763
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=153.57 Aligned_cols=110 Identities=30% Similarity=0.394 Sum_probs=76.1
Q ss_pred CcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccccccc
Q 048205 550 KDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNL 629 (1027)
Q Consensus 550 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l 629 (1027)
++++.|++++|.++ .+|..+..+++|+.|+|++|++++..|..|+++++|++|+|++|+|++..|..|+.+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 35666666666666 46666777777777777777777655566777777777777777777655556777777777777
Q ss_pred ccccccCCchhhhhcccCCcceeccCCCCCC
Q 048205 630 SNNNLFGIIPISLEKLLDLKDINVSFNKLEG 660 (1027)
Q Consensus 630 ~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g 660 (1027)
++|+|++..+..+..+++|+.|++++|++..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 7777775555566777777777777777654
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=2e-15 Score=151.44 Aligned_cols=114 Identities=23% Similarity=0.257 Sum_probs=82.6
Q ss_pred CcccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccccccccccccccc
Q 048205 550 KDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNL 629 (1027)
Q Consensus 550 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l 629 (1027)
++|+.|++++|.+++..+..++.+++|+.|++++|++++..+..|+.+++|++|+|++|++++..|..++.+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 46677777777777655556677777777777777777555555677777888888888877555555677777888888
Q ss_pred ccccccCCchhhhhcccCCcceeccCCCCCCCCC
Q 048205 630 SNNNLFGIIPISLEKLLDLKDINVSFNKLEGEIP 663 (1027)
Q Consensus 630 ~~N~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p 663 (1027)
++|++++..+..+..+++|+.|++++|++.+.+|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887776555556777778888888887777665
No 388
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=2.2e-15 Score=146.49 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=61.9
Q ss_pred CCCcEEEccCCccc-ccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEe
Q 048205 26 KRLRNISLSLNDFS-GTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLD 104 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~-~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 104 (1027)
++|++|++++|.++ +.+|..+..+++|++|++++|++++. ..++.+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 44444445555555555555555422 3444444555555555554443444444444444444
Q ss_pred CCcccccccchhhhhcCCCCCcEEEccCCcCCcc-CcccccCCCCCcEEEccCCccccccC---ccccCCCCCcEEEcc
Q 048205 105 LSVNNLTGELLANICSNLPLLQTLFLDENNFDGK-IPSTLLRCKHLQTLSLSINDFSGDIP---KEIGNLTKLKYLHLD 179 (1027)
Q Consensus 105 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~ 179 (1027)
+++|+++ +. .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~-------------------------~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIK-------------------------DLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCC-------------------------SHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCC-------------------------ChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444444 32 12445555555555555555554333 345555555555554
No 389
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.58 E-value=6.5e-14 Score=159.84 Aligned_cols=336 Identities=13% Similarity=0.063 Sum_probs=256.0
Q ss_pred ccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCc
Q 048205 61 KLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIP 140 (1027)
Q Consensus 61 ~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 140 (1027)
.++.....+|.++.+|+.+.+..+ ++.+...+|.++++|+.+++..+ ++ .+....|.++.+|+.+.+..+ +..+..
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecc
Confidence 466677788999999999999854 77677789999999999999865 55 677889999999999887755 555677
Q ss_pred ccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCC
Q 048205 141 STLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSS 220 (1027)
Q Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 220 (1027)
.+|.++..+........ ......+|.++++|+.+.+.++..+ +....|.++.+|+.+++..| ++.+...+|.++..
T Consensus 134 ~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCccc--cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 78888765554443333 2245678999999999999876543 66678999999999999887 55466678899999
Q ss_pred CCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCccceeccC
Q 048205 221 LSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLDLQF 300 (1027)
Q Consensus 221 L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~L~~ 300 (1027)
|+.+.+..+... +...++ ....|+.+.+..+.-. + -...+..+..|+.+.+..
T Consensus 210 L~~i~~~~~~~~----------------i~~~~~-~~~~l~~i~ip~~~~~--i--------~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 210 LENMEFPNSLYY----------------LGDFAL-SKTGVKNIIIPDSFTE--L--------GKSVFYGCTDLESISIQN 262 (394)
T ss_dssp CCBCCCCTTCCE----------------ECTTTT-TTCCCCEEEECTTCCE--E--------CSSTTTTCSSCCEEEECC
T ss_pred cceeecCCCceE----------------eehhhc-ccCCCceEEECCCcee--c--------ccccccccccceeEEcCC
Confidence 999888766532 122222 2356788877644321 1 123466788999999987
Q ss_pred ccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccCCcC
Q 048205 301 NRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFSGTI 380 (1027)
Q Consensus 301 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 380 (1027)
+... +....|.....++.+.+..+.+ ....|.++.+|+.+.+..+ + ..++..+|..+.+|+.++|.++ ++.+-
T Consensus 263 ~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i-~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 263 NKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-V-KFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp TTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-C-CEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred Ccce-eeccccccccccceeccCceee---ccccccccccccccccccc-c-ceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 7544 7788899999999998887654 4467889999999999876 4 4788889999999999999754 66555
Q ss_pred cccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEe
Q 048205 381 PSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYF 445 (1027)
Q Consensus 381 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L 445 (1027)
..+|.++++|+.+++..| ++.+...+|.++.+|+.+++..+ ++.+ ...+.+|+.|+.+
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~~-----~~~F~~c~~L~~I 393 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQY-----RYDFEDTTKFKWI 393 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGGG-----GGGBCTTCEEEEE
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEEh-----hheecCCCCCcEE
Confidence 778999999999999877 77788899999999999999765 3322 1246788888764
No 390
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=8.4e-15 Score=148.89 Aligned_cols=128 Identities=30% Similarity=0.309 Sum_probs=69.1
Q ss_pred cEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCcc
Q 048205 29 RNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVN 108 (1027)
Q Consensus 29 ~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 108 (1027)
+.+++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|.|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 34555555555 4444332 34555555555554 44444555555555555555555444444444444444444444
Q ss_pred cccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCC
Q 048205 109 NLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQG 185 (1027)
Q Consensus 109 ~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 185 (1027)
+ |+++.+..|.++++|++|+|++|.|+...+..|..+++|+.|+|++|.+..
T Consensus 89 ~-------------------------l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 R-------------------------LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp C-------------------------CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred c-------------------------cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 4 444555556666666666666666665545556666666666666666653
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.58 E-value=7e-17 Score=165.41 Aligned_cols=151 Identities=22% Similarity=0.313 Sum_probs=92.9
Q ss_pred ccccceEEecCccccCchhH------hhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCc
Q 048205 488 LTNLIAIYLGVNKLNGSILI------ALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNF 561 (1027)
Q Consensus 488 l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~ 561 (1027)
...++.++++.|.++|.+|. .+..+++|++|+|++|+++ .+| .+.++++|++|++++|.
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~--------------~l~-~~~~l~~L~~L~l~~n~ 81 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIE--------------KIS-SLSGMENLRILSLGRNL 81 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEES--------------CCC-CHHHHTTCCEEEEEEEE
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCc--------------ccc-ccccCCCCCEEECCCCC
Confidence 34445555555555555444 6666666666666666663 234 55566666666666666
Q ss_pred cccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcc--ccccccccccccccccccccCCch
Q 048205 562 FTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIP--DSIGDMINLKSLNLSNNNLFGIIP 639 (1027)
Q Consensus 562 l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip--~~~~~l~~L~~L~l~~N~l~~~~p 639 (1027)
++ .+|..++.+++|+.|++++|++++ +| .++.+++|++|+|++|++++ +| +.++.+++|++|++++|++++.+|
T Consensus 82 l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 82 IK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp EC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc-hhHHHHHhcCCCCCEEEecCCccccccc
Confidence 66 356666666667777777777764 44 46666777777777777663 33 256666777777777777766655
Q ss_pred hh----------hhcccCCcceeccCCCCC
Q 048205 640 IS----------LEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 640 ~~----------l~~l~~L~~l~l~~N~l~ 659 (1027)
.. +..+++|+.|| +|.++
T Consensus 158 ~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 158 ENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred cccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 42 66666676665 44443
No 392
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=2.5e-14 Score=143.49 Aligned_cols=114 Identities=26% Similarity=0.257 Sum_probs=81.3
Q ss_pred CCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeec
Q 048205 123 PLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQL 202 (1027)
Q Consensus 123 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 202 (1027)
++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 34555555555555555566677777777777777777655666777777888888888777666666777788888888
Q ss_pred cccccCCCCCccccCCCCCCEEEccCccCCCCCC
Q 048205 203 QNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFP 236 (1027)
Q Consensus 203 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 236 (1027)
++|++++..+..|..+++|++|++++|.+++..|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888875555556778888888888888775433
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=2.7e-16 Score=161.04 Aligned_cols=136 Identities=22% Similarity=0.242 Sum_probs=118.6
Q ss_pred cCcccccccccceEEecCccccCchhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCC
Q 048205 481 IPKEINNLTNLIAIYLGVNKLNGSILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLN 560 (1027)
Q Consensus 481 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N 560 (1027)
+|..++.+++|++|++++|++++ +| .+.++++|++|+|++|+++ .+|..+..+++|++|++++|
T Consensus 40 l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~--------------~l~~~~~~~~~L~~L~L~~N 103 (198)
T 1ds9_A 40 MDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK--------------KIENLDAVADTLEELWISYN 103 (198)
T ss_dssp CHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC--------------SCSSHHHHHHHCSEEEEEEE
T ss_pred hhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc--------------cccchhhcCCcCCEEECcCC
Confidence 44489999999999999999997 66 9999999999999999984 56777778899999999999
Q ss_pred ccccCccccccCcccccEEcccccccccccc-hhhccCccccEEEccCCccccCcccc----------cccccccccccc
Q 048205 561 FFTGPLPLEIGNLKVLVQIDLSINNFSDVIP-TTIGGLKDLQYLFLKYNRLQGSIPDS----------IGDMINLKSLNL 629 (1027)
Q Consensus 561 ~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~g~ip~~----------~~~l~~L~~L~l 629 (1027)
.+++ +| .++.+++|+.|++++|++++..+ ..++.+++|++|++++|.+++.+|.. +..+++|+.||
T Consensus 104 ~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld- 180 (198)
T 1ds9_A 104 QIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD- 180 (198)
T ss_dssp ECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC-
T ss_pred cCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC-
Confidence 9997 66 68899999999999999985322 47999999999999999999877764 88999999987
Q ss_pred ccccccC
Q 048205 630 SNNNLFG 636 (1027)
Q Consensus 630 ~~N~l~~ 636 (1027)
+|.++.
T Consensus 181 -~~~i~~ 186 (198)
T 1ds9_A 181 -GMPVDV 186 (198)
T ss_dssp -CGGGTT
T ss_pred -CcccCH
Confidence 777763
No 394
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=1.3e-14 Score=145.25 Aligned_cols=105 Identities=18% Similarity=0.133 Sum_probs=67.5
Q ss_pred cccEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccc--cccccccccccc
Q 048205 551 DILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPD--SIGDMINLKSLN 628 (1027)
Q Consensus 551 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~--~~~~l~~L~~L~ 628 (1027)
+|++|++++|.+++. ..++.+++|+.|++++|++++..|..++.+++|++|+|++|+++ .+|. .++.+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 555555555555542 45666667777777777776433344467777777777777775 5665 666777777777
Q ss_pred cccccccCCchhh----hhcccCCcceeccCCCCC
Q 048205 629 LSNNNLFGIIPIS----LEKLLDLKDINVSFNKLE 659 (1027)
Q Consensus 629 l~~N~l~~~~p~~----l~~l~~L~~l~l~~N~l~ 659 (1027)
|++|+++ .+|.. +..+++|+.||+++|..+
T Consensus 120 l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 120 ILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 7777776 44543 667777777777776653
No 395
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=4.9e-14 Score=141.13 Aligned_cols=134 Identities=20% Similarity=0.236 Sum_probs=71.5
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccC-CCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVT-TLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSL 100 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~-~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 100 (1027)
+..+.+|++|++++|+++ .+|. +..+. +|++|+|++|+|++. ..|+.+++|++|+|++|++++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 455666666666666666 3443 33333 666666666666533 445555666666666666554333333555555
Q ss_pred CeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCcc----ccCCCCCcEE
Q 048205 101 SNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKE----IGNLTKLKYL 176 (1027)
Q Consensus 101 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L 176 (1027)
++|++++|+++. ++. ...+..+++|++|++++|.+. .+|.. +..+++|++|
T Consensus 91 ~~L~L~~N~i~~-~~~-----------------------~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~L 145 (176)
T 1a9n_A 91 TELILTNNSLVE-LGD-----------------------LDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVL 145 (176)
T ss_dssp CEEECCSCCCCC-GGG-----------------------GGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEE
T ss_pred CEEECCCCcCCc-chh-----------------------hHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcccee
Confidence 555555555542 221 014555555555555555555 33432 5556666666
Q ss_pred EccCccCC
Q 048205 177 HLDQNRLQ 184 (1027)
Q Consensus 177 ~L~~N~l~ 184 (1027)
++++|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 66665544
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=1.5e-13 Score=136.45 Aligned_cols=108 Identities=20% Similarity=0.195 Sum_probs=66.6
Q ss_pred cEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccc
Q 048205 553 LCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNN 632 (1027)
Q Consensus 553 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 632 (1027)
+.+++++|.++. +|..+. ++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 455666666653 555442 55666666666666655666666666666666666666433344566666666666666
Q ss_pred cccCCchhhhhcccCCcceeccCCCCCCCCC
Q 048205 633 NLFGIIPISLEKLLDLKDINVSFNKLEGEIP 663 (1027)
Q Consensus 633 ~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~p 663 (1027)
+|++..|..+..+++|+.|++++|++.+..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 6665555556666666666666666665543
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.1e-13 Score=134.23 Aligned_cols=109 Identities=21% Similarity=0.178 Sum_probs=92.4
Q ss_pred cceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhh
Q 048205 515 LQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTI 594 (1027)
Q Consensus 515 L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~ 594 (1027)
.+++++++|+|+ ++|..+. ++|++|+|++|.+++..|..|+.+++|+.|+|++|+|++..|..|
T Consensus 11 ~~~l~~s~n~l~--------------~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f 74 (170)
T 3g39_A 11 GTTVDCSGKSLA--------------SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF 74 (170)
T ss_dssp TTEEECTTSCCS--------------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred CCEEEeCCCCcC--------------ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhc
Confidence 467888888773 4555553 788999999999998888899999999999999999997666678
Q ss_pred ccCccccEEEccCCccccCccccccccccccccccccccccCCch
Q 048205 595 GGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIP 639 (1027)
Q Consensus 595 ~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p 639 (1027)
+++++|++|+|++|+|++..|..|+.+++|+.|+|++|+++...+
T Consensus 75 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 75 DKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred cCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999999999999999996555679999999999999999986644
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=3.1e-13 Score=134.71 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=64.2
Q ss_pred cEEecCCCccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCccccccccccccccccccc
Q 048205 553 LCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNN 632 (1027)
Q Consensus 553 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N 632 (1027)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|+++++|++|+|++|+|++..|..|+.+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45556666554 3555443 56666666666666555666666666666666666666432333456666666666666
Q ss_pred cccCCchhhhhcccCCcceeccCCCCCCCC
Q 048205 633 NLFGIIPISLEKLLDLKDINVSFNKLEGEI 662 (1027)
Q Consensus 633 ~l~~~~p~~l~~l~~L~~l~l~~N~l~g~~ 662 (1027)
+|++..|..+..+++|+.|++++|++....
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 666554445666666666666666665443
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=5.6e-13 Score=132.77 Aligned_cols=112 Identities=21% Similarity=0.174 Sum_probs=90.3
Q ss_pred ceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCccccCccccccCcccccEEcccccccccccchhhc
Q 048205 516 QLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIG 595 (1027)
Q Consensus 516 ~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~ 595 (1027)
+.+++++|++ +++|..+. ++|++|+|++|.+++..|..|+.+++|+.|+|++|+|++..+..|+
T Consensus 15 ~~l~~~~n~l--------------~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 78 (174)
T 2r9u_A 15 TLVNCQNIRL--------------ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFD 78 (174)
T ss_dssp SEEECCSSCC--------------SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cEEEeCCCCC--------------CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhC
Confidence 5678888877 34555553 7888999999999988888999999999999999999975555679
Q ss_pred cCccccEEEccCCccccCccccccccccccccccccccccCCchhhhhc
Q 048205 596 GLKDLQYLFLKYNRLQGSIPDSIGDMINLKSLNLSNNNLFGIIPISLEK 644 (1027)
Q Consensus 596 ~l~~L~~L~L~~N~l~g~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~~ 644 (1027)
.+++|++|+|++|+|++..|..|+.+++|++|+|++|++... |..+..
T Consensus 79 ~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~-~~~~~~ 126 (174)
T 2r9u_A 79 KLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE-CRDIMY 126 (174)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTT-BGGGHH
T ss_pred CcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCcccc-cccHHH
Confidence 999999999999999964444589999999999999999844 443333
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.38 E-value=3.3e-11 Score=137.35 Aligned_cols=336 Identities=10% Similarity=0.120 Sum_probs=196.3
Q ss_pred cceeCcccccCCC-CCCEEEccCcccCCccCccccCCCCCCeEeCCccc---ccccchhhhhcCCCCCcEEEccCCcCCc
Q 048205 62 LQGEIPEELGNLA-ELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNN---LTGELLANICSNLPLLQTLFLDENNFDG 137 (1027)
Q Consensus 62 i~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~---l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 137 (1027)
++.....+|.++. .|+.+.+..+ ++.+...+|.++++|+.+.++.|. ++ .+....|.++.+|+.+.+.++ ++.
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cce
Confidence 4444555677664 4788777654 555666777788888888877664 44 556667777777777766554 444
Q ss_pred cCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccC
Q 048205 138 KIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFN 217 (1027)
Q Consensus 138 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 217 (1027)
+...+|..+.+|+.+.+..+. .......|..+.+|+.+.+..+ ++.+...+|.+ ..|+.+.+..+-.. ....+|.+
T Consensus 128 I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~ 203 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSE 203 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTT
T ss_pred ehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhh
Confidence 666677778888888876543 3355567777788888877655 33344445544 56777777665443 45566777
Q ss_pred CCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCCCCCCCCCccccCcCCcccee
Q 048205 218 LSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIPKEIGNLAKLEKLD 297 (1027)
Q Consensus 218 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p~~l~~l~~L~~L~ 297 (1027)
+.+++......+... .+...++........... .+.....+..+.
T Consensus 204 c~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 248 (394)
T 4gt6_A 204 CFALSTITSDSESYP---------------AIDNVLYEKSANGDYALI--------------------RYPSQREDPAFK 248 (394)
T ss_dssp CTTCCEEEECCSSSC---------------BSSSCEEEECTTSCEEEE--------------------ECCTTCCCSEEE
T ss_pred ccccceecccccccc---------------cccceeeccccccccccc--------------------ccccccccceEE
Confidence 777777766655443 011111100000000000 000111222232
Q ss_pred ccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCccEEEccccccC
Q 048205 298 LQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNLEELSLSGNNFS 377 (1027)
Q Consensus 298 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~ 377 (1027)
+. +.++.+...+|.++..|+.+.+..+. ..+...+|.++.+|+.+.+..+ + ..++..+|..+.+|+.++|..+ ++
T Consensus 249 ip-~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~~~-i-~~I~~~aF~~c~~L~~i~lp~~-v~ 323 (394)
T 4gt6_A 249 IP-NGVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFSSR-I-TELPESVFAGCISLKSIDIPEG-IT 323 (394)
T ss_dssp CC-TTEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-C-CEECTTTTTTCTTCCEEECCTT-CC
T ss_pred cC-CcceEcccceeeecccccEEeccccc-ceecCcccccccccccccCCCc-c-cccCceeecCCCCcCEEEeCCc-cc
Confidence 22 23444555667777777777776543 3456667777777877777533 3 3677777777778888888654 55
Q ss_pred CcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCCCCccccccccccccccEeeccCCCC
Q 048205 378 GTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSSTSELSFLSSSNCKYLEYFSISNNPL 452 (1027)
Q Consensus 378 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~l~~~~~~~l~~L~~L~Ls~N~l 452 (1027)
.+-..+|.++++|+.+.+..+ ++.+...+|.++++|+.+++.+|... ...+..+..|+.+.+..|.+
T Consensus 324 ~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~-------~~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 324 QILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQ-------WNAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHH-------HHTCBCCCCC----------
T ss_pred EehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceee-------hhhhhccCCCCEEEeCCCCE
Confidence 444567777888888888644 66666777888888888888776521 11234566666666655543
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.33 E-value=1.4e-10 Score=132.25 Aligned_cols=329 Identities=12% Similarity=0.118 Sum_probs=181.3
Q ss_pred CccccccC-CCcEEEccccccceeCcccccCCCCCCEEEccCcc---cCCccCccccCCCCCCeEeCCcccccccchhhh
Q 048205 43 PKEIGNVT-TLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNF---LTGTIPSSIFNLSSLSNLDLSVNNLTGELLANI 118 (1027)
Q Consensus 43 p~~i~~l~-~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 118 (1027)
..+|.+.. .|+.+.+..+ ++.....+|.++.+|+.+.++.|. ++.+...+|..+.+|+.+.+..+ ++ .+....
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~-~I~~~a 132 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT-EIDSEA 132 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS-EECTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc-eehhhh
Confidence 34454443 4666666543 555566667777777777776653 54444566777777777666544 33 455666
Q ss_pred hcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEccCccCCCCCChhccCCCCCC
Q 048205 119 CSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLDQNRLQGEIPEELGNLAELE 198 (1027)
Q Consensus 119 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 198 (1027)
|.++.+|+.+.+..+ +..+...+|..+.+|+.+.+..+ ++.....+|.. .+|+.+.+..+-.. +....|..+.++.
T Consensus 133 F~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~ 208 (394)
T 4gt6_A 133 FHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALS 208 (394)
T ss_dssp TTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCC
T ss_pred hhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccc
Confidence 777777777777644 34456667777777877777655 33344455654 56777777655433 4556677777777
Q ss_pred eeeccccccCCCCCccccC-CCCCCEEEccCccCCCCCCcchhhhhhccccCCccccCCCccccEEEeccccccccCCCC
Q 048205 199 KLQLQNNFLTGTIPPSIFN-LSSLSDLELSFNSLTGNFPKDMHIVNRLSAELPAKFCNNIPFLEEIYLSKNMFYGEIPSD 277 (1027)
Q Consensus 199 ~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 277 (1027)
......+.... ....+.. ......-...... ...+..+.+..+ ++.
T Consensus 209 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~ip~~-v~~----- 255 (394)
T 4gt6_A 209 TITSDSESYPA-IDNVLYEKSANGDYALIRYPS--------------------------QREDPAFKIPNG-VAR----- 255 (394)
T ss_dssp EEEECCSSSCB-SSSCEEEECTTSCEEEEECCT--------------------------TCCCSEEECCTT-EEE-----
T ss_pred eeccccccccc-ccceeeccccccccccccccc--------------------------ccccceEEcCCc-ceE-----
Confidence 77666655542 2222211 1111111100000 001111111100 000
Q ss_pred CCCCCCCccccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCC
Q 048205 278 LGNCTIPKEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPS 357 (1027)
Q Consensus 278 ~~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 357 (1027)
.-..+|.++..|+.+.+..+.. .+...+|.++..|+.+.+. +.++.+...+|.++.+|+.+++..+ + ..+..
T Consensus 256 ----i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v-~~I~~ 327 (394)
T 4gt6_A 256 ----IETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-I-TQILD 327 (394)
T ss_dssp ----ECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-C-CEECT
T ss_pred ----cccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-c-cEehH
Confidence 0012344455555555544332 2455566666777766664 4456666667777777777777654 3 35667
Q ss_pred CccCCCCCccEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCC
Q 048205 358 SADVRLPNLEELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNY 423 (1027)
Q Consensus 358 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 423 (1027)
.+|..+.+|+.+.|..+ ++.+-..+|.++++|+.+++.+|.... ..|....+|+.+.+..|.
T Consensus 328 ~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 328 DAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred hHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 77777777777777544 554445677777888888887776542 456667777777776664
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=4.8e-13 Score=150.40 Aligned_cols=161 Identities=17% Similarity=0.172 Sum_probs=112.9
Q ss_pred ccccceEEecCccccCchhHhhhcc-----cccceeeccCceeecccCCCCCccccccccCccccccCcccEEecCCCcc
Q 048205 488 LTNLIAIYLGVNKLNGSILIALGKL-----KKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLNLSLNFF 562 (1027)
Q Consensus 488 l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~Ls~N~l 562 (1027)
+..|+.|+|++|.++......+..+ ++|++|+|++|++++.. +..-...+++|+.|+|++|.+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~------------~~~l~~~L~~L~~L~Ls~n~l 138 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAG------------LRTLLPVFLRARKLGLQLNSL 138 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHH------------HHHTHHHHHTEEEEECCSSCC
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHH------------HHHHHHHHHhccHhhcCCCCC
Confidence 3567778888888776555555544 67888888888874321 111122355778888888888
Q ss_pred ccCccccc-----cCcccccEEccccccccc----ccchhhccCccccEEEccCCcccc----Ccccccccccccccccc
Q 048205 563 TGPLPLEI-----GNLKVLVQIDLSINNFSD----VIPTTIGGLKDLQYLFLKYNRLQG----SIPDSIGDMINLKSLNL 629 (1027)
Q Consensus 563 ~~~~p~~~-----~~l~~L~~L~ls~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~g----~ip~~~~~l~~L~~L~l 629 (1027)
+..-...+ .....|++|+|++|.++. .++..+..+++|++|+|++|.|+. .++..+...++|+.|+|
T Consensus 139 ~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~L 218 (372)
T 3un9_A 139 GPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNV 218 (372)
T ss_dssp CHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEEC
T ss_pred CHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEEC
Confidence 75433333 235678889999998864 255556778889999999998874 24666777788999999
Q ss_pred ccccccCC----chhhhhcccCCcceeccCCCCCC
Q 048205 630 SNNNLFGI----IPISLEKLLDLKDINVSFNKLEG 660 (1027)
Q Consensus 630 ~~N~l~~~----~p~~l~~l~~L~~l~l~~N~l~g 660 (1027)
++|+++.. ++..+...++|+.|||++|.++.
T Consensus 219 s~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 219 AYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 99998753 44556667889999999998764
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.28 E-value=2e-13 Score=153.41 Aligned_cols=159 Identities=21% Similarity=0.179 Sum_probs=97.3
Q ss_pred CCCCEEEccCcccCCccCccccC-----CCCCCeEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccc-----
Q 048205 74 AELEELWLQNNFLTGTIPSSIFN-----LSSLSNLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTL----- 143 (1027)
Q Consensus 74 ~~L~~L~L~~N~l~~~~p~~l~~-----l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~----- 143 (1027)
+.|++|+|++|.++......+.. .++|++|+|++|.++......++..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777766433333222 25677777777777644444455555667777777777764433333
Q ss_pred cCCCCCcEEEccCCcccc----ccCccccCCCCCcEEEccCccCCCCC----ChhccCCCCCCeeeccccccCCC----C
Q 048205 144 LRCKHLQTLSLSINDFSG----DIPKEIGNLTKLKYLHLDQNRLQGEI----PEELGNLAELEKLQLQNNFLTGT----I 211 (1027)
Q Consensus 144 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~----~ 211 (1027)
...++|++|+|++|.|+. .++..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|++. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 235677777777777753 23444566777777777777776422 34455666777777777777642 2
Q ss_pred CccccCCCCCCEEEccCccCC
Q 048205 212 PPSIFNLSSLSDLELSFNSLT 232 (1027)
Q Consensus 212 p~~~~~l~~L~~L~Ls~N~l~ 232 (1027)
+..+...++|++|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 233445677777777777775
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.23 E-value=2.6e-11 Score=129.95 Aligned_cols=146 Identities=15% Similarity=0.094 Sum_probs=114.5
Q ss_pred HHHhCCCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCccceEEeEEecCCeeEEE
Q 048205 746 FQATNGFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRNIIKFISSCSSDDFKALV 824 (1027)
Q Consensus 746 ~~~~~~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV 824 (1027)
.....+|+.....+.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++|
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 344567888888999999999999754 6899999987533233346888999999885 67788999999988899999
Q ss_pred EEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 048205 825 LEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-------------------------------------- 866 (1027)
Q Consensus 825 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------- 866 (1027)
|||++|.++.+.... ......++.+++++++.||..
T Consensus 89 ~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 89 MSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp EECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 999999999875321 122346788999999999951
Q ss_pred ------------------CCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 867 ------------------YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 867 ------------------~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
....++|+|++|.||++++++.+.|+||+.+.
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876666799999775
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.3e-11 Score=138.22 Aligned_cols=94 Identities=19% Similarity=0.189 Sum_probs=63.2
Q ss_pred cccCccccccCcccEEecCC-CccccCccccccCcccccEEcccccccccccchhhccCccccEEEccCCccccCcccc-
Q 048205 540 TSIPSTLWNLKDILCLNLSL-NFFTGPLPLEIGNLKVLVQIDLSINNFSDVIPTTIGGLKDLQYLFLKYNRLQGSIPDS- 617 (1027)
Q Consensus 540 ~~~p~~l~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~g~ip~~- 617 (1027)
+.+|. +..+++|+.|+|++ |.+++..|..|+.+++|+.|+|++|+|++..|..|++|++|++|+|++|+|++ +|+.
T Consensus 22 ~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~ 99 (347)
T 2ifg_A 22 DSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALES-LSWKT 99 (347)
T ss_dssp TTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSC-CCSTT
T ss_pred CccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccce-eCHHH
Confidence 35666 66677777777775 77776555667777777777777777776666667777777777777777774 4433
Q ss_pred ccccccccccccccccccC
Q 048205 618 IGDMINLKSLNLSNNNLFG 636 (1027)
Q Consensus 618 ~~~l~~L~~L~l~~N~l~~ 636 (1027)
+..+. |+.|+|++|++..
T Consensus 100 ~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 100 VQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp TCSCC-CCEEECCSSCCCC
T ss_pred cccCC-ceEEEeeCCCccC
Confidence 33343 7777777777763
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=7.1e-11 Score=132.20 Aligned_cols=102 Identities=20% Similarity=0.195 Sum_probs=47.4
Q ss_pred EecCCC-cCcccCCccCcCCCCCcEEEccC-CcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 7 LFLKSN-MFHGKIPSTLSNCKRLRNISLSL-NDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 7 L~l~~n-~l~~~~~~~~~~~~~L~~L~L~~-n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
++.+++ +++ .+|. |..+++|++|+|++ |.|++..|..|+.+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 344444 444 2343 44444555555543 4554433344445555555555555554444444455555555555555
Q ss_pred ccCCccCccccCCCCCCeEeCCccccc
Q 048205 85 FLTGTIPSSIFNLSSLSNLDLSVNNLT 111 (1027)
Q Consensus 85 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 111 (1027)
+|++..+..|..++ |+.|+|++|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55433333333333 445555444443
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.08 E-value=2.4e-10 Score=122.29 Aligned_cols=136 Identities=15% Similarity=0.100 Sum_probs=101.0
Q ss_pred CCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCc--cceEEeEEecCCeeEEEEEec
Q 048205 751 GFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN--IIKFISSCSSDDFKALVLEYM 828 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e~~ 828 (1027)
+|....+.+.|..+.||++...+|+.+++|+.... ....+..|+++++.+++.+ +.+++++....+..++||||+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i 97 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV 97 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence 34443333466679999998777889999997643 2345778999999986554 556888888888899999999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------------
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY----------------------------------------- 867 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 867 (1027)
+|.++. ... .+ ...++.++++.++.||...
T Consensus 98 ~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (264)
T 1nd4_A 98 PGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 168 (264)
T ss_dssp SSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred CCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHH
Confidence 998874 211 11 2356778888888888321
Q ss_pred --------------CCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 868 --------------SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 868 --------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 169 ~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 169 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999887667799999876
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=1.9e-08 Score=113.75 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=89.7
Q ss_pred ccCcCCccceeccCccccccCCccccCcCcccceeccCcccccccCccccccCCcceEEccCccccccCCCCccCCCCCc
Q 048205 287 IGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRLPNL 366 (1027)
Q Consensus 287 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L 366 (1027)
+....+|+.+.+..+ +..+...+|.+...|+.+.+..+ ++.+...+|.++.+|+.+.+..+ + ..++..+|..+++|
T Consensus 213 f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i-~~i~~~aF~~c~~L 288 (379)
T 4h09_A 213 FSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-V-KTVPYLLCSGCSNL 288 (379)
T ss_dssp TTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-C-SEECTTTTTTCTTC
T ss_pred cccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-c-eecccccccccccc
Confidence 344455666665433 44455566777777777777655 55566667777777777777554 3 35666777777778
Q ss_pred cEEEccccccCCcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCCC
Q 048205 367 EELSLSGNNFSGTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTSS 427 (1027)
Q Consensus 367 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 427 (1027)
+.+.+.++.++.+-...|.++.+|+.+.|..+ ++.+...+|.++++|+.+.+..+ ++.+
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 88887777776555667777788888887654 65566677888888888777654 4433
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.01 E-value=2.7e-08 Score=112.54 Aligned_cols=301 Identities=10% Similarity=0.099 Sum_probs=209.2
Q ss_pred CcCCCCCcEEEccCCcccccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCccCccccCCCCCC
Q 048205 22 LSNCKRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLS 101 (1027)
Q Consensus 22 ~~~~~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 101 (1027)
+....+|+.+.+.. .++.....+|..+.+|+.++|..+ ++.....+|.++ +|+.+.+..+ ++.+...+|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 45556788888864 466455677888888888888754 665666778776 5777777654 44344445544 4788
Q ss_pred eEeCCcccccccchhhhhcCCCCCcEEEccCCcCCccCcccccCCCCCcEEEccCCcccc------------ccCccccC
Q 048205 102 NLDLSVNNLTGELLANICSNLPLLQTLFLDENNFDGKIPSTLLRCKHLQTLSLSINDFSG------------DIPKEIGN 169 (1027)
Q Consensus 102 ~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------------~~p~~~~~ 169 (1027)
.+.+..+- + .+....|.+. +++.+.+..+ ++.+...+|..+.+++...+..+.... .....+..
T Consensus 117 ~i~lp~~~-~-~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 117 DFEFPGAT-T-EIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp EEECCTTC-C-EECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred cccCCCcc-c-cccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 88887653 2 3445555544 5666665543 444666778888888888776554321 12234555
Q ss_pred CCCCcEEEccCccCCCCCChhccCCCCCCeeeccccccCCCCCccccCCCCCCEEEccCccCCCCCCcchhhhhhccccC
Q 048205 170 LTKLKYLHLDQNRLQGEIPEELGNLAELEKLQLQNNFLTGTIPPSIFNLSSLSDLELSFNSLTGNFPKDMHIVNRLSAEL 249 (1027)
Q Consensus 170 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~l 249 (1027)
...+..+.+..+.-. .....+....+|+.+.+..+ ++.+...+|.++..|+.+.+..+ ++ .+
T Consensus 193 ~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~---------------~I 254 (379)
T 4h09_A 193 AKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT---------------SI 254 (379)
T ss_dssp TCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC---------------EE
T ss_pred cccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc---------------Ee
Confidence 666666666554433 45567777888888888765 44355667888899999888665 43 56
Q ss_pred CccccCCCccccEEEeccccccccCCCCCCCCCCC-ccccCcCCccceeccCccccccCCccccCcCcccceeccCcccc
Q 048205 250 PAKFCNNIPFLEEIYLSKNMFYGEIPSDLGNCTIP-KEIGNLAKLEKLDLQFNRLQCVIPHEIDNLHNLEWMIFSFNKLV 328 (1027)
Q Consensus 250 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~p-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 328 (1027)
....|.....|+.+.+..+ ++ .++ ..|.++++|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++
T Consensus 255 ~~~aF~~~~~l~~i~l~~~-i~----------~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~ 322 (379)
T 4h09_A 255 GSFLLQNCTALKTLNFYAK-VK----------TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK 322 (379)
T ss_dssp CTTTTTTCTTCCEEEECCC-CS----------EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC
T ss_pred Cccccceeehhcccccccc-ce----------eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc
Confidence 6777888888888888654 32 222 35677889999999999898888899999999999999755 77
Q ss_pred cccCccccccCCcceEEccCccccccCCCCccCCC
Q 048205 329 GVVPTTIFNVSTLKFLYLGSNSFFGRLPSSADVRL 363 (1027)
Q Consensus 329 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 363 (1027)
.+...+|.++.+|+.+.+..+ + ..|...+|.+.
T Consensus 323 ~I~~~aF~~C~~L~~i~ip~~-v-~~I~~~aF~~c 355 (379)
T 4h09_A 323 TIQVYAFKNCKALSTISYPKS-I-TLIESGAFEGS 355 (379)
T ss_dssp EECTTTTTTCTTCCCCCCCTT-C-CEECTTTTTTS
T ss_pred EEHHHHhhCCCCCCEEEECCc-c-CEEchhHhhCC
Confidence 788889999999999998765 4 36777777554
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.3e-09 Score=118.20 Aligned_cols=144 Identities=10% Similarity=0.097 Sum_probs=106.9
Q ss_pred CCccceeeccccceEEEEEecCCceEEEEEEe--ccc-chhHHHHHHHHHHHhhcc--CCccceEEeEEecC---CeeEE
Q 048205 752 FSENNLIGRGGFGFVYKARIQDGMEVAVKVFD--LQY-GRAIKSFDIECGMIKRIR--HRNIIKFISSCSSD---DFKAL 823 (1027)
Q Consensus 752 f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~l 823 (1027)
....+.++.|.++.||+++..+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp CCEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred CceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 3446789999999999998764 678888765 221 122356788999999997 45678899988776 45899
Q ss_pred EEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCC------------------------------------
Q 048205 824 VLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY------------------------------------ 867 (1027)
Q Consensus 824 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 867 (1027)
||||++|..+.+.. ...++..++..++.+++++|+.||...
T Consensus 119 vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp EEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred EEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99999998774421 122577888889999999999999420
Q ss_pred -------------------CCCeEeccCCCCcEEEcCCCc--EEEeeecCCcc
Q 048205 868 -------------------SVPIIHCDLKPNNVLLDDNMV--AHLSDFGMAKP 899 (1027)
Q Consensus 868 -------------------~~~ivH~Dlkp~NIll~~~~~--~kl~Dfgla~~ 899 (1027)
...++|||++|.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997753 68999998874
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.83 E-value=1.2e-09 Score=121.46 Aligned_cols=179 Identities=17% Similarity=0.260 Sum_probs=91.0
Q ss_pred CCcEEEccCCcccc--------cCCccccccCCCcEEEccccccc---------eeCcccccCCCCCCEEEccCcccCCc
Q 048205 27 RLRNISLSLNDFSG--------TIPKEIGNVTTLIGLHLRGNKLQ---------GEIPEELGNLAELEELWLQNNFLTGT 89 (1027)
Q Consensus 27 ~L~~L~L~~n~l~~--------~~p~~i~~l~~L~~L~L~~n~i~---------~~~p~~l~~l~~L~~L~L~~N~l~~~ 89 (1027)
+++.|.+......+ .+.+++..+++|+.|.+..+... +.+...+..+++|++|+|++|.-. .
T Consensus 108 ~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~ 186 (362)
T 2ra8_A 108 SLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-S 186 (362)
T ss_dssp GCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-B
T ss_pred hcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-e
Confidence 45566665443321 12334556777888877654321 124455667788888888877311 2
Q ss_pred cCccccCCCCCCeEeCCcccccccchhhhh-cCCCCCcEEEccC--CcCCcc-----Ccccc--cCCCCCcEEEccCCcc
Q 048205 90 IPSSIFNLSSLSNLDLSVNNLTGELLANIC-SNLPLLQTLFLDE--NNFDGK-----IPSTL--LRCKHLQTLSLSINDF 159 (1027)
Q Consensus 90 ~p~~l~~l~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~L~~--N~l~~~-----~~~~~--~~l~~L~~L~Ls~N~l 159 (1027)
++. +. +++|++|+|..|.++......+. ..+|+|++|+|+. |...+. +...+ ..+++|++|+|++|.+
T Consensus 187 l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 187 IGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp CCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred ecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 222 33 77888888888887643333333 2577888887753 221111 01111 1345566666665555
Q ss_pred ccccCccc---cCCCCCcEEEccCccCCCCC----ChhccCCCCCCeeeccccccC
Q 048205 160 SGDIPKEI---GNLTKLKYLHLDQNRLQGEI----PEELGNLAELEKLQLQNNFLT 208 (1027)
Q Consensus 160 ~~~~p~~~---~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~ 208 (1027)
....+..+ ..+++|++|+|+.|.+++.. +..+..+++|+.|+|++|.|+
T Consensus 265 ~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 265 QNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp HHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred chHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 43222222 13445555555555554321 112223345555555555444
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.80 E-value=2.9e-09 Score=116.55 Aligned_cols=187 Identities=18% Similarity=0.166 Sum_probs=121.3
Q ss_pred cceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCc--cceEEeEEecCC---eeEEEEEec
Q 048205 755 NNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRN--IIKFISSCSSDD---FKALVLEYM 828 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lV~e~~ 828 (1027)
.+.++.|.+..||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+....+ ..++||||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4678999999999874 57999986532 34567888999998884 333 445555543333 348899999
Q ss_pred CCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC------------------------------------------
Q 048205 829 PYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG------------------------------------------ 866 (1027)
Q Consensus 829 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~------------------------------------------ 866 (1027)
+|.++.+.... .++..++..++.++++.++.||..
T Consensus 99 ~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 175 (304)
T 3sg8_A 99 KGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDD 175 (304)
T ss_dssp CCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred CCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHH
Confidence 99888653321 256677778888888888888831
Q ss_pred -------------CCCCeEeccCCCCcEEEcC--CCcEEEeeecCCcccccCCCcceecc------------cccCcccc
Q 048205 867 -------------YSVPIIHCDLKPNNVLLDD--NMVAHLSDFGMAKPFLKEDQSLTQTQ------------TLATIGYM 919 (1027)
Q Consensus 867 -------------~~~~ivH~Dlkp~NIll~~--~~~~kl~Dfgla~~~~~~~~~~~~~~------------~~gt~~y~ 919 (1027)
....++|+|++|.||+++. ++.+.++||+.+.............. .....++.
T Consensus 176 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~ 255 (304)
T 3sg8_A 176 FYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHK 255 (304)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCS
T ss_pred HHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCC
Confidence 0135799999999999998 45678999999864321100000000 00001111
Q ss_pred C-cccccCCCCCcchhHHHHHHHHHHHHcCCCCC
Q 048205 920 A-PEYGREGRVSTNGDVYSFGIMLMETFTRKKPT 952 (1027)
Q Consensus 920 a-PE~~~~~~~~~~~DvwslGvil~elltg~~p~ 952 (1027)
. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 256 ~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 256 DIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp CHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1 222111 112258999999999999998765
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.78 E-value=2.6e-09 Score=118.80 Aligned_cols=183 Identities=17% Similarity=0.267 Sum_probs=116.3
Q ss_pred CccCcCCCCCcEEEccCCccc---------ccCCccccccCCCcEEEccccccceeCcccccCCCCCCEEEccCcccCCc
Q 048205 19 PSTLSNCKRLRNISLSLNDFS---------GTIPKEIGNVTTLIGLHLRGNKLQGEIPEELGNLAELEELWLQNNFLTGT 89 (1027)
Q Consensus 19 ~~~~~~~~~L~~L~L~~n~l~---------~~~p~~i~~l~~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N~l~~~ 89 (1027)
..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..|.+...
T Consensus 132 ~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 132 VENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHH
T ss_pred HHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChH
Confidence 344566778888888654321 124455667788888888877311 2333 33 77888888888887643
Q ss_pred cCcccc--CCCCCCeEeCCc--cccccc--c--hhhhh--cCCCCCcEEEccCCcCCccCccccc---CCCCCcEEEccC
Q 048205 90 IPSSIF--NLSSLSNLDLSV--NNLTGE--L--LANIC--SNLPLLQTLFLDENNFDGKIPSTLL---RCKHLQTLSLSI 156 (1027)
Q Consensus 90 ~p~~l~--~l~~L~~L~Ls~--N~l~~~--~--~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~Ls~ 156 (1027)
....+. .+++|++|+|+. |...+. + ....+ ..+|+|++|+|.+|.+....+..+. .+++|++|+|+.
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~ 288 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISA 288 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCS
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCC
Confidence 333443 678888888753 221111 0 01122 2478899999988888643333333 478899999999
Q ss_pred Cccccc----cCccccCCCCCcEEEccCccCCCCCChhccC-CCCCCeeeccccc
Q 048205 157 NDFSGD----IPKEIGNLTKLKYLHLDQNRLQGEIPEELGN-LAELEKLQLQNNF 206 (1027)
Q Consensus 157 N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 206 (1027)
|.+.+. ++..+.++++|+.|+|++|.++...-..+.. + ...+++++++
T Consensus 289 n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 289 GVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 998753 3444566789999999999887543333433 2 3568888887
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.51 E-value=4.9e-07 Score=99.39 Aligned_cols=136 Identities=18% Similarity=0.169 Sum_probs=101.1
Q ss_pred CCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccC----CccceEEeEEecCCeeEEEEE
Q 048205 751 GFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRH----RNIIKFISSCSSDDFKALVLE 826 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lV~e 826 (1027)
.+...+.++.|....||++ |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 5666788999999999998 678999986432 224568889999998876 234555554 45689999
Q ss_pred ecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCC---------------------------------------
Q 048205 827 YMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY--------------------------------------- 867 (1027)
Q Consensus 827 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 867 (1027)
|++|.++.+.... .++..++..++.++++.++.||...
T Consensus 108 ~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 108 YIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp CCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 9999888643221 2466667777888888888887321
Q ss_pred ---------------------CCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 868 ---------------------SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 868 ---------------------~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
...++|+|++|.||+++.++.+.++||+.+..
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 12359999999999999876679999999864
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.48 E-value=1.9e-08 Score=105.89 Aligned_cols=80 Identities=21% Similarity=0.297 Sum_probs=53.5
Q ss_pred cCcccccEEccccccccc--ccchhhccCccccEEEccCCccccCccccccccc--cccccccccccccCCch-------
Q 048205 571 GNLKVLVQIDLSINNFSD--VIPTTIGGLKDLQYLFLKYNRLQGSIPDSIGDMI--NLKSLNLSNNNLFGIIP------- 639 (1027)
Q Consensus 571 ~~l~~L~~L~ls~n~l~~--~~p~~~~~l~~L~~L~L~~N~l~g~ip~~~~~l~--~L~~L~l~~N~l~~~~p------- 639 (1027)
.++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. .++..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 345667777777777765 4556667777777777777777743 3455555 77777777777776665
Q ss_pred hhhhcccCCccee
Q 048205 640 ISLEKLLDLKDIN 652 (1027)
Q Consensus 640 ~~l~~l~~L~~l~ 652 (1027)
..+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 2366777777765
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.41 E-value=9.2e-08 Score=95.83 Aligned_cols=117 Identities=12% Similarity=0.126 Sum_probs=61.7
Q ss_pred ccccccCCCcEEEcccc-ccce----eCcccccCCCCCCEEEccCcccCCc----cCccccCCCCCCeEeCCcccccccc
Q 048205 44 KEIGNVTTLIGLHLRGN-KLQG----EIPEELGNLAELEELWLQNNFLTGT----IPSSIFNLSSLSNLDLSVNNLTGEL 114 (1027)
Q Consensus 44 ~~i~~l~~L~~L~L~~n-~i~~----~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~ 114 (1027)
..+...++|++|+|++| .|.. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.|++..
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34444555555555555 5432 1233344455566666666655532 1223334455666666666665322
Q ss_pred h---hhhhcCCCCCcEEEc--cCCcCCcc----CcccccCCCCCcEEEccCCccc
Q 048205 115 L---ANICSNLPLLQTLFL--DENNFDGK----IPSTLLRCKHLQTLSLSINDFS 160 (1027)
Q Consensus 115 ~---~~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~ 160 (1027)
. ...+...+.|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 1 223334455666666 55666532 2344555677888888888775
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.40 E-value=8.8e-08 Score=95.96 Aligned_cols=121 Identities=13% Similarity=0.071 Sum_probs=60.9
Q ss_pred CcccccccccceEEecCc-cccCc----hhHhhhcccccceeeccCceeecccCCCCCccccccccCccccccCcccEEe
Q 048205 482 PKEINNLTNLIAIYLGVN-KLNGS----ILIALGKLKKLQLLSLKDNQLEGSIPDNLSFSCTLTSIPSTLWNLKDILCLN 556 (1027)
Q Consensus 482 p~~~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~~~~~~~~p~~l~~l~~L~~L~ 556 (1027)
...+...++|++|+|++| .+... +...+...++|++|+|++|++... ....+...+...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~---------g~~~l~~~L~~n------- 92 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDP---------VAFALAEMLKVN------- 92 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHH---------HHHHHHHHHHHC-------
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChH---------HHHHHHHHHHhC-------
Confidence 344555666777777776 66532 334455556666666666666321 111222233333
Q ss_pred cCCCccccCccccccCcccccEEcccccccccc----cchhhccCccccEEEc--cCCccccC----ccccccccccccc
Q 048205 557 LSLNFFTGPLPLEIGNLKVLVQIDLSINNFSDV----IPTTIGGLKDLQYLFL--KYNRLQGS----IPDSIGDMINLKS 626 (1027)
Q Consensus 557 Ls~N~l~~~~p~~~~~l~~L~~L~ls~n~l~~~----~p~~~~~l~~L~~L~L--~~N~l~g~----ip~~~~~l~~L~~ 626 (1027)
+.|++|+|++|.|.+. +...+...+.|++|+| ++|.|... +...+...++|++
T Consensus 93 -----------------~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~ 155 (185)
T 1io0_A 93 -----------------NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLK 155 (185)
T ss_dssp -----------------SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCE
T ss_pred -----------------CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCE
Confidence 4445555555554422 3344444555566666 55555532 2233334455666
Q ss_pred ccccccccc
Q 048205 627 LNLSNNNLF 635 (1027)
Q Consensus 627 L~l~~N~l~ 635 (1027)
|+|++|.+.
T Consensus 156 L~L~~n~i~ 164 (185)
T 1io0_A 156 FGYHFTQQG 164 (185)
T ss_dssp EECCCSSHH
T ss_pred EeccCCCCC
Confidence 666666553
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.38 E-value=6.4e-08 Score=101.82 Aligned_cols=92 Identities=28% Similarity=0.281 Sum_probs=72.4
Q ss_pred cCcccccE--Ecccccccc---cccchhhccCccccEEEccCCcccc--CccccccccccccccccccccccCCchhhhh
Q 048205 571 GNLKVLVQ--IDLSINNFS---DVIPTTIGGLKDLQYLFLKYNRLQG--SIPDSIGDMINLKSLNLSNNNLFGIIPISLE 643 (1027)
Q Consensus 571 ~~l~~L~~--L~ls~n~l~---~~~p~~~~~l~~L~~L~L~~N~l~g--~ip~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 643 (1027)
.....|.. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..++.+++|+.|+|++|+|++. .++.
T Consensus 138 ~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~ 215 (267)
T 3rw6_A 138 RSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELD 215 (267)
T ss_dssp GGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGG
T ss_pred CCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhh
Confidence 33445554 778888543 3233333678999999999999998 5678888999999999999999976 4566
Q ss_pred ccc--CCcceeccCCCCCCCCCC
Q 048205 644 KLL--DLKDINVSFNKLEGEIPR 664 (1027)
Q Consensus 644 ~l~--~L~~l~l~~N~l~g~~p~ 664 (1027)
.+. .|+.|+|++|++++.+|.
T Consensus 216 ~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 216 KIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp GGTTSCCSEEECTTSTTGGGCSS
T ss_pred hcccCCcceEEccCCcCccccCc
Confidence 666 899999999999998774
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.37 E-value=3.5e-06 Score=90.15 Aligned_cols=134 Identities=16% Similarity=0.071 Sum_probs=96.7
Q ss_pred eeeccccc-eEEEEEec-CCceEEEEEEecccchhHHHHHHHHHHHhhcc-CCccceEEeEEecCCeeEEEEEecCCCCH
Q 048205 757 LIGRGGFG-FVYKARIQ-DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR-HRNIIKFISSCSSDDFKALVLEYMPYGSL 833 (1027)
Q Consensus 757 ~lG~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lV~e~~~~gsL 833 (1027)
.+..|..| .||+.... ++..+++|+-.. .....+.+|.+.++.+. +-.+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45566666 69998765 567899998653 24456788999988885 33477889999999999999999999888
Q ss_pred HHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCC----------------------------------------------
Q 048205 834 EKCLYSSNYILDIFQRLNIMIDVASALEYLHFGY---------------------------------------------- 867 (1027)
Q Consensus 834 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~---------------------------------------------- 867 (1027)
.+..... ......++.++++.++.||...
T Consensus 108 ~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (272)
T 4gkh_A 108 FQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKE 182 (272)
T ss_dssp HHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHH
T ss_pred cccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHH
Confidence 7654321 1122345556666666666210
Q ss_pred ---------CCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 868 ---------SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 868 ---------~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
...++|+|+++.||+++.++.+-|+||+.+.
T Consensus 183 l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 183 MHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp HHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1127899999999999988777899999875
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.33 E-value=3.1e-06 Score=90.98 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=61.3
Q ss_pred CccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCC---ccceEEeEEecCCeeEEEEEecC
Q 048205 753 SENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR---NIIKFISSCSSDDFKALVLEYMP 829 (1027)
Q Consensus 753 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~~~ 829 (1027)
...+.+|.|.++.||+++..+|+.++||+...........+..|++.++.+++. .+.+++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 446789999999999999888999999996533232346788999999999875 577777764 3589999999
Q ss_pred CCCH
Q 048205 830 YGSL 833 (1027)
Q Consensus 830 ~gsL 833 (1027)
|+.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.32 E-value=3.7e-06 Score=91.60 Aligned_cols=136 Identities=16% Similarity=0.148 Sum_probs=95.0
Q ss_pred cceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCC---ccceEEeEEe-cCCeeEEEEEecCC
Q 048205 755 NNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR---NIIKFISSCS-SDDFKALVLEYMPY 830 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lV~e~~~~ 830 (1027)
.+.++.|....||+. |+.+++|+... ......+..|+++++.+.+. .+.+++.++. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 467889999999988 67899998532 23456788999999999753 3567777764 45567899999999
Q ss_pred CCHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcC--------------------------------------------
Q 048205 831 GSLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFG-------------------------------------------- 866 (1027)
Q Consensus 831 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-------------------------------------------- 866 (1027)
..+.+.... .++..++..++.++++.++.||..
T Consensus 98 ~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 174 (306)
T 3tdw_A 98 QILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTL 174 (306)
T ss_dssp EECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHH
T ss_pred eECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Confidence 887653211 123444444555555555555421
Q ss_pred -------------CCCCeEeccCCCCcEEEcC---CCc-EEEeeecCCcc
Q 048205 867 -------------YSVPIIHCDLKPNNVLLDD---NMV-AHLSDFGMAKP 899 (1027)
Q Consensus 867 -------------~~~~ivH~Dlkp~NIll~~---~~~-~kl~Dfgla~~ 899 (1027)
....++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 175 ~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 175 RFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1345799999999999987 455 48999998763
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.16 E-value=7e-06 Score=91.56 Aligned_cols=142 Identities=11% Similarity=0.096 Sum_probs=91.4
Q ss_pred CCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCc--cceEEeEEecC-CeeEEEEEec
Q 048205 752 FSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN--IIKFISSCSSD-DFKALVLEYM 828 (1027)
Q Consensus 752 f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lV~e~~ 828 (1027)
....+.++.|....||+.+. +|+.+++|+.... ..+..|+.+++.+.... +.++++++... +..++||||+
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l 116 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRA 116 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECC
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEec
Confidence 44467789999999999875 5789999987432 25778999999887543 56777777654 6789999999
Q ss_pred CCCCHHHH------------------HhcCCc----c------------CCHHHH---------------------HHHH
Q 048205 829 PYGSLEKC------------------LYSSNY----I------------LDIFQR---------------------LNIM 853 (1027)
Q Consensus 829 ~~gsL~~~------------------l~~~~~----~------------~~~~~~---------------------~~i~ 853 (1027)
+|.++.+. ++.... . -.|... ....
T Consensus 117 ~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 196 (362)
T 3ovc_A 117 QGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVA 196 (362)
T ss_dssp CSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccch
Confidence 98655321 111100 0 001101 0111
Q ss_pred HHHHHHHHHhhcC-CCCCeEeccCCCCcEEEcCCCcEEEeeecCCcc
Q 048205 854 IDVASALEYLHFG-YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKP 899 (1027)
Q Consensus 854 ~~i~~~l~~LH~~-~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~ 899 (1027)
..+....+++... ....++|+|++|.||+++.++.+.|+||+.+..
T Consensus 197 ~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 197 QALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1122222233211 125689999999999998877788999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.08 E-value=4.6e-06 Score=93.22 Aligned_cols=80 Identities=6% Similarity=-0.041 Sum_probs=56.6
Q ss_pred ccee-eccccceEEEEEec-------CCceEEEEEEeccc---chhHHHHHHHHHHHhhccC---CccceEEeEEecC--
Q 048205 755 NNLI-GRGGFGFVYKARIQ-------DGMEVAVKVFDLQY---GRAIKSFDIECGMIKRIRH---RNIIKFISSCSSD-- 818 (1027)
Q Consensus 755 ~~~l-G~G~~g~V~~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~-- 818 (1027)
.+.| +.|....+|+++.. +++.+++|+..... ......+.+|+++++.+.. ..+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88999999998754 26789999865322 1012457788888888853 3567788887665
Q ss_pred -CeeEEEEEecCCCCHH
Q 048205 819 -DFKALVLEYMPYGSLE 834 (1027)
Q Consensus 819 -~~~~lV~e~~~~gsL~ 834 (1027)
+..++||||++|..+.
T Consensus 105 ~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TSSCEEEEECCCCBCCC
T ss_pred cCCceEEEEecCCCChh
Confidence 3568999999987654
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=3.2e-05 Score=85.78 Aligned_cols=139 Identities=16% Similarity=0.164 Sum_probs=80.6
Q ss_pred cceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCC--ccceEEe------EEecCCeeEEEEE
Q 048205 755 NNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR--NIIKFIS------SCSSDDFKALVLE 826 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~------~~~~~~~~~lV~e 826 (1027)
.+.++.|..+.||++...+| .+++|+.... ...+..|+++++.+... .+.+++. +....+..++|||
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EEECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566678899999987655 5999998742 12334455666655421 2344443 1234567899999
Q ss_pred ecCCCCHH-----H---------HHhcC--Cc-----------cCCHHHH------------------------------
Q 048205 827 YMPYGSLE-----K---------CLYSS--NY-----------ILDIFQR------------------------------ 849 (1027)
Q Consensus 827 ~~~~gsL~-----~---------~l~~~--~~-----------~~~~~~~------------------------------ 849 (1027)
|++|..+. + .+|.. .. ...|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 0 12211 00 0122211
Q ss_pred -HHHHHHHHHHHHHhhc----------CCCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 850 -LNIMIDVASALEYLHF----------GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 850 -~~i~~~i~~~l~~LH~----------~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
..+...+.+++++++. .....++|+|+++.||+++.++.+.++||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223345666652 025789999999999999888899999999875
No 425
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=4.7e-05 Score=86.28 Aligned_cols=75 Identities=17% Similarity=0.163 Sum_probs=49.9
Q ss_pred cceeeccccceEEEEEec-CCceEEEEEEecccc-------hhHHHHHHHHHHHhhccC--C-ccceEEeEEecCCeeEE
Q 048205 755 NNLIGRGGFGFVYKARIQ-DGMEVAVKVFDLQYG-------RAIKSFDIECGMIKRIRH--R-NIIKFISSCSSDDFKAL 823 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h--~-niv~l~~~~~~~~~~~l 823 (1027)
.+.+|.|.++.||+++.. +++.|+||....... .....+..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 568999999999999765 468899998643211 123456778888888743 3 34455544 3345689
Q ss_pred EEEecCCC
Q 048205 824 VLEYMPYG 831 (1027)
Q Consensus 824 V~e~~~~g 831 (1027)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.80 E-value=6.4e-06 Score=80.13 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=44.8
Q ss_pred CCCcEEEccCCcccccCCccccccCCCcEEEccccc-cceeCcccccCC----CCCCEEEccCcc-cCCccCccccCCCC
Q 048205 26 KRLRNISLSLNDFSGTIPKEIGNVTTLIGLHLRGNK-LQGEIPEELGNL----AELEELWLQNNF-LTGTIPSSIFNLSS 99 (1027)
Q Consensus 26 ~~L~~L~L~~n~l~~~~p~~i~~l~~L~~L~L~~n~-i~~~~p~~l~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~ 99 (1027)
..|++|||+++.|+...-..+..+++|++|+|++|. |++..-..++.+ ++|++|+|++|. |++..-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 346666666666655545555556666666666653 544333344443 246666666553 55433344555555
Q ss_pred CCeEeCCccc
Q 048205 100 LSNLDLSVNN 109 (1027)
Q Consensus 100 L~~L~Ls~N~ 109 (1027)
|++|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666665553
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.68 E-value=0.00022 Score=77.18 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=93.2
Q ss_pred CccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhcc---CCccceEEeEEecCCeeEEEEEecC
Q 048205 753 SENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIR---HRNIIKFISSCSSDDFKALVLEYMP 829 (1027)
Q Consensus 753 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lV~e~~~ 829 (1027)
...+.|+.|....+|+.+. +++.+++|+.... ....+..|.+.++.+. ...+.++++++...+..++||||++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp CEEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eeeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 3456799999999999986 4678899987633 3466888999988884 2568889999888888999999999
Q ss_pred CCCHH--------H---HHhcCCc---------------------cCCHHHHH---HHHH----------------HHHH
Q 048205 830 YGSLE--------K---CLYSSNY---------------------ILDIFQRL---NIMI----------------DVAS 858 (1027)
Q Consensus 830 ~gsL~--------~---~l~~~~~---------------------~~~~~~~~---~i~~----------------~i~~ 858 (1027)
|..+. + .+|.... .-+|.... ++.. .+++
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 87541 1 1232211 11343321 1111 1111
Q ss_pred H-HHHhh-cCCCCCeEeccCCCCcEEEcCCCcEEEeeec
Q 048205 859 A-LEYLH-FGYSVPIIHCDLKPNNVLLDDNMVAHLSDFG 895 (1027)
Q Consensus 859 ~-l~~LH-~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfg 895 (1027)
. ...|. ......++|+|+.+.|++++.++ +.|+|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 22342 12246799999999999999887 8899973
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.62 E-value=1.9e-05 Score=76.76 Aligned_cols=34 Identities=9% Similarity=0.078 Sum_probs=16.0
Q ss_pred CCcEEEccccccceeCcccccCCCCCCEEEccCc
Q 048205 51 TLIGLHLRGNKLQGEIPEELGNLAELEELWLQNN 84 (1027)
Q Consensus 51 ~L~~L~L~~n~i~~~~p~~l~~l~~L~~L~L~~N 84 (1027)
.|+.|||++|.|+...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4455555555544333334444444444444444
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.51 E-value=0.00034 Score=75.19 Aligned_cols=79 Identities=13% Similarity=0.078 Sum_probs=58.2
Q ss_pred CCCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCC---ccceEEeEEecCCeeEEEEEe
Q 048205 751 GFSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR---NIIKFISSCSSDDFKALVLEY 827 (1027)
Q Consensus 751 ~f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lV~e~ 827 (1027)
.....+.+|.|..+.||+++..+|+.|++|+...........+..|++.++.+... .+.+++++. ..++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34556789999999999999999999999986544333345688899999988532 345555542 23789999
Q ss_pred cCCCCH
Q 048205 828 MPYGSL 833 (1027)
Q Consensus 828 ~~~gsL 833 (1027)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987643
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.32 E-value=9.8e-05 Score=73.21 Aligned_cols=67 Identities=21% Similarity=0.183 Sum_probs=32.9
Q ss_pred ccccCCCcEEEcccc-ccce----eCcccccCCCCCCEEEccCcccCCcc----CccccCCCCCCeEeCCcccccc
Q 048205 46 IGNVTTLIGLHLRGN-KLQG----EIPEELGNLAELEELWLQNNFLTGTI----PSSIFNLSSLSNLDLSVNNLTG 112 (1027)
Q Consensus 46 i~~l~~L~~L~L~~n-~i~~----~~p~~l~~l~~L~~L~L~~N~l~~~~----p~~l~~l~~L~~L~Ls~N~l~~ 112 (1027)
+.+-+.|++|+|++| +|.. .+.+.+..-+.|+.|+|++|+|.+.. ...+..-+.|++|+|++|.|.+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 334455556666553 5432 23344445555666666666655322 1222234555666666665553
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.31 E-value=0.00085 Score=72.58 Aligned_cols=138 Identities=13% Similarity=0.133 Sum_probs=77.6
Q ss_pred CCccceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCcc-ceEEeEEecCCeeEEEEEec-C
Q 048205 752 FSENNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNI-IKFISSCSSDDFKALVLEYM-P 829 (1027)
Q Consensus 752 f~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~-~ 829 (1027)
+.-.+.|+.|....+|++ +.+++|+....... ......|+++++.+...++ .++++++. +.-++|+||+ +
T Consensus 20 ~~~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~ 91 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAG 91 (301)
T ss_dssp CCSCEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTT
T ss_pred ccceeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCC
Confidence 333678999999999998 67899987643221 1223568888877754333 45665433 3347899999 6
Q ss_pred CCCHHHH------------------HhcCCcc----CCH-HHHHHHHH--------------HHHHHH----HHhh-cCC
Q 048205 830 YGSLEKC------------------LYSSNYI----LDI-FQRLNIMI--------------DVASAL----EYLH-FGY 867 (1027)
Q Consensus 830 ~gsL~~~------------------l~~~~~~----~~~-~~~~~i~~--------------~i~~~l----~~LH-~~~ 867 (1027)
|.++... +|..... .+. .....+.. .+.+.+ +.+. ...
T Consensus 92 g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 92 AQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp CEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred CccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 6444210 1111100 011 11111100 011111 1111 012
Q ss_pred CCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 868 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 868 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
...++|+|+.|.||+ ..++.+.++||..+.
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 345899999999999 667788999999876
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.28 E-value=0.00013 Score=72.31 Aligned_cols=114 Identities=13% Similarity=0.128 Sum_probs=75.4
Q ss_pred cCcCCCCCcEEEccCC-ccccc----CCccccccCCCcEEEcccccccee----CcccccCCCCCCEEEccCcccCCc--
Q 048205 21 TLSNCKRLRNISLSLN-DFSGT----IPKEIGNVTTLIGLHLRGNKLQGE----IPEELGNLAELEELWLQNNFLTGT-- 89 (1027)
Q Consensus 21 ~~~~~~~L~~L~L~~n-~l~~~----~p~~i~~l~~L~~L~L~~n~i~~~----~p~~l~~l~~L~~L~L~~N~l~~~-- 89 (1027)
.+.+-+.|++|+|++| +|... +.+++..-+.|+.|+|++|+|... +.+.+..-+.|++|+|+.|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3456678999999985 88643 455666778999999999999744 344455778899999999999843
Q ss_pred --cCccccCCCCCCeEeCCcc---cccccc---hhhhhcCCCCCcEEEccCCc
Q 048205 90 --IPSSIFNLSSLSNLDLSVN---NLTGEL---LANICSNLPLLQTLFLDENN 134 (1027)
Q Consensus 90 --~p~~l~~l~~L~~L~Ls~N---~l~~~~---~~~~~~~l~~L~~L~L~~N~ 134 (1027)
+-.++..-+.|++|+|++| .+.... .......-+.|++|+++.|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 2334555677888888765 333211 12233334455555555443
No 433
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.25 E-value=0.00098 Score=75.91 Aligned_cols=77 Identities=13% Similarity=0.099 Sum_probs=47.6
Q ss_pred CCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcceecccc--cCccccCcccccCC---CCCcchhHHHHHHHH
Q 048205 868 SVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQTL--ATIGYMAPEYGREG---RVSTNGDVYSFGIML 942 (1027)
Q Consensus 868 ~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~---~~~~~~DvwslGvil 942 (1027)
...++|+|++|.||+++.++ ++++||+.+..-... ....... -...|++|+..... ......++.+....+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT 306 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence 67899999999999998876 999999988742110 0000001 12346666655321 112234555777778
Q ss_pred HHHHcC
Q 048205 943 METFTR 948 (1027)
Q Consensus 943 ~elltg 948 (1027)
|+.+++
T Consensus 307 ~~~y~~ 312 (420)
T 2pyw_A 307 WNLFNK 312 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877765
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.18 E-value=0.0013 Score=71.87 Aligned_cols=155 Identities=14% Similarity=0.160 Sum_probs=87.0
Q ss_pred cHHHHHHHhCCCCc-----cceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCc--cceEEe
Q 048205 741 TYLELFQATNGFSE-----NNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN--IIKFIS 813 (1027)
Q Consensus 741 ~~~~~~~~~~~f~~-----~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~ 813 (1027)
+.+++......|.. .+.|+.|....||++...+| .+++|+..... ....+..|+++++.+...+ +.+++.
T Consensus 8 ~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 8 TEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 34455554455654 34567788899999987655 68899886421 2234566777777775323 333332
Q ss_pred E------EecCCeeEEEEEecCCCCHHH-----H---------HhcC--C--cc-------CCHHHHHH-----------
Q 048205 814 S------CSSDDFKALVLEYMPYGSLEK-----C---------LYSS--N--YI-------LDIFQRLN----------- 851 (1027)
Q Consensus 814 ~------~~~~~~~~lV~e~~~~gsL~~-----~---------l~~~--~--~~-------~~~~~~~~----------- 851 (1027)
. ....+..++||+|++|..+.. + +|.. . .. ..|.....
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1 122356789999999865311 0 2211 0 00 11221110
Q ss_pred -HHHHHHHHHHHhhcC----CCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 852 -IMIDVASALEYLHFG----YSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 852 -i~~~i~~~l~~LH~~----~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
+...+.+.+++++.. ...+++|+|+++.||+++.++.+.++||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001133445555421 24579999999999999987666899999875
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.99 E-value=0.0029 Score=69.39 Aligned_cols=140 Identities=11% Similarity=0.054 Sum_probs=74.6
Q ss_pred cceeeccccce-EEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCC--ccceEEeEEecCCeeEEEEEecCCC
Q 048205 755 NNLIGRGGFGF-VYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHR--NIIKFISSCSSDDFKALVLEYMPYG 831 (1027)
Q Consensus 755 ~~~lG~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~~~~lV~e~~~~g 831 (1027)
.+.++.|+... +|+.+..+|+.+++|...... ...+..|+++++.+... .+.+++.+..+.+ ++|||++.+.
T Consensus 23 ~~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~---~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~ 97 (333)
T 3csv_A 23 RTPLAGDASSRRYQRLRSPTGAKAVLMDWSPEE---GGDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDA 97 (333)
T ss_dssp ECC--------CCEEEECTTCCEEEEEECCTTT---TCCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSC
T ss_pred eeECCCCCCCceEEEEEcCCCCeEEEEECCCCC---CccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCc
Confidence 34566665554 667765446778777644321 13345577777777432 3556776644443 7899999776
Q ss_pred CHHHHHhcCC-------------------------ccCCHHHHH-------H-H------------HHHHHHHHHHhh--
Q 048205 832 SLEKCLYSSN-------------------------YILDIFQRL-------N-I------------MIDVASALEYLH-- 864 (1027)
Q Consensus 832 sL~~~l~~~~-------------------------~~~~~~~~~-------~-i------------~~~i~~~l~~LH-- 864 (1027)
.+.+++.... ..++..... . + ...+.+.++.+.
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 6654332110 011111100 0 0 011112222221
Q ss_pred -cCCCCCeEeccCCCCcEEEcCC----CcEEEeeecCCcc
Q 048205 865 -FGYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAKP 899 (1027)
Q Consensus 865 -~~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfgla~~ 899 (1027)
......++|||+++.||+++.+ +.+.++||+.+..
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1125679999999999999875 6899999998863
No 436
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.99 E-value=0.0045 Score=67.69 Aligned_cols=140 Identities=13% Similarity=0.109 Sum_probs=82.4
Q ss_pred cceeeccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccCCc--cceEEeE-----EecCCeeEEEEEe
Q 048205 755 NNLIGRGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN--IIKFISS-----CSSDDFKALVLEY 827 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lV~e~ 827 (1027)
...++ |....||++...+|+.+++|+...... ....+..|.++++.+.... +++++.. ....+..++||||
T Consensus 31 ~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 31 LTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp CEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred EEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 34577 888899998877788899999863321 2345667888888775322 3444443 1224566889999
Q ss_pred cCCCCHH-----HH---------Hhc----C----CccCCHHHH----------------------HHHHHHHHHHHHHh
Q 048205 828 MPYGSLE-----KC---------LYS----S----NYILDIFQR----------------------LNIMIDVASALEYL 863 (1027)
Q Consensus 828 ~~~gsL~-----~~---------l~~----~----~~~~~~~~~----------------------~~i~~~i~~~l~~L 863 (1027)
++|..+. .+ +|. . ....++... ...+..++..++-.
T Consensus 109 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (328)
T 1zyl_A 109 VGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAH 188 (328)
T ss_dssp CCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9875431 11 111 0 011222111 01111122222222
Q ss_pred hc-CCCCCeEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 864 HF-GYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 864 H~-~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
.. .....++|+|+++.||+++ + .+.++||+.+.
T Consensus 189 ~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 189 WREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred hhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 11 1245689999999999998 4 89999999876
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.96 E-value=0.0012 Score=75.06 Aligned_cols=73 Identities=18% Similarity=0.231 Sum_probs=50.5
Q ss_pred cceeeccccceEEEEEecC--------CceEEEEEEecccchhHHHHHHHHHHHhhccCCcc-ceEEeEEecCCeeEEEE
Q 048205 755 NNLIGRGGFGFVYKARIQD--------GMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNI-IKFISSCSSDDFKALVL 825 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~ 825 (1027)
.+.|+.|....||++...+ ++.|++|+..... ....+..|.++++.+...++ .++++.+.+ .+|+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 4578889999999998653 5789999985321 11445578888888854444 566766543 3899
Q ss_pred EecCCCCH
Q 048205 826 EYMPYGSL 833 (1027)
Q Consensus 826 e~~~~gsL 833 (1027)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99986433
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79 E-value=0.0042 Score=68.93 Aligned_cols=139 Identities=14% Similarity=0.185 Sum_probs=83.0
Q ss_pred cceeeccccceEEEEEec--------CCceEEEEEEecccchhHHHHHHHHHHHhhccCCc-cceEEeEEecCCeeEEEE
Q 048205 755 NNLIGRGGFGFVYKARIQ--------DGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN-IIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 825 (1027)
.+.+..|-...+|+++.. +++.|++|+.... ........+|.++++.+...+ ..++++++.+ .+||
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 456778889999999864 2578999986432 123456678999998885333 3566666553 3999
Q ss_pred EecCCCCHHHH-----------------HhcCC----ccCC--HHHHHHHHHHHHH-------------------HHHHh
Q 048205 826 EYMPYGSLEKC-----------------LYSSN----YILD--IFQRLNIMIDVAS-------------------ALEYL 863 (1027)
Q Consensus 826 e~~~~gsL~~~-----------------l~~~~----~~~~--~~~~~~i~~~i~~-------------------~l~~L 863 (1027)
||++|.++..- +|..+ .... +.++.++..++.. .++.+
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99988654210 12211 1122 3344444433321 12222
Q ss_pred ----hc-CCCCCeEeccCCCCcEEEcCC----CcEEEeeecCCc
Q 048205 864 ----HF-GYSVPIIHCDLKPNNVLLDDN----MVAHLSDFGMAK 898 (1027)
Q Consensus 864 ----H~-~~~~~ivH~Dlkp~NIll~~~----~~~kl~Dfgla~ 898 (1027)
.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 21 123568999999999999876 789999999876
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.73 E-value=0.0032 Score=71.91 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=49.0
Q ss_pred cceeeccccceEEEEEecC-CceEEEEEEecccchhHHHHHHHHHHHhhccCCcc-ceEEeEEecCCeeEEEEEecCCCC
Q 048205 755 NNLIGRGGFGFVYKARIQD-GMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRNI-IKFISSCSSDDFKALVLEYMPYGS 832 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lV~e~~~~gs 832 (1027)
.+.|+.|-...+|++...+ +..|++|+....... ......|.++++.+...++ .++++++. . ..||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~-~---G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT-N---GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET-T---EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC-C---eEEEEeeCCcc
Confidence 4578889999999998765 578999987543221 1122578888888865554 46777663 2 35999998754
Q ss_pred H
Q 048205 833 L 833 (1027)
Q Consensus 833 L 833 (1027)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 440
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.70 E-value=0.01 Score=58.95 Aligned_cols=101 Identities=14% Similarity=0.060 Sum_probs=67.8
Q ss_pred CHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEEEcCCCcEEEeeecCCcccccCCCcceecc
Q 048205 832 SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVLLDDNMVAHLSDFGMAKPFLKEDQSLTQTQ 911 (1027)
Q Consensus 832 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIll~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 911 (1027)
+|.+.+...+.++.+.+++.++.|.+.+|.-.-. .+.-..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 8999999999999999999999999999877621 11111233457899999999988764 1110
Q ss_pred cccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCC
Q 048205 912 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKK 950 (1027)
Q Consensus 912 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~ 950 (1027)
.....+.|||... ...+.+.=|||+|+++|..+-=..
T Consensus 98 -~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 -AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp ----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred -ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0122366888764 345678899999999999885333
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.57 E-value=0.0034 Score=70.01 Aligned_cols=74 Identities=9% Similarity=0.149 Sum_probs=45.4
Q ss_pred cceeeccccceEEEEEecC---------CceEEEEEEecccchhHHHHHHHHHHHhhccCCc-cceEEeEEecCCeeEEE
Q 048205 755 NNLIGRGGFGFVYKARIQD---------GMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN-IIKFISSCSSDDFKALV 824 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV 824 (1027)
.+.++.|....||++...+ ++.+++|+....... ......|.++++.+...+ +.++++.. . -++|
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 3567888889999998653 268889987543221 123457888888885444 34666554 2 2689
Q ss_pred EEecCCCCH
Q 048205 825 LEYMPYGSL 833 (1027)
Q Consensus 825 ~e~~~~gsL 833 (1027)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.45 E-value=0.011 Score=64.95 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=43.5
Q ss_pred ccccceEEEEEecCCceEEEEEEecccchhHHHHHHHHHHHhhccC---CccceEEeE------EecCCeeEEEEEecCC
Q 048205 760 RGGFGFVYKARIQDGMEVAVKVFDLQYGRAIKSFDIECGMIKRIRH---RNIIKFISS------CSSDDFKALVLEYMPY 830 (1027)
Q Consensus 760 ~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~------~~~~~~~~lV~e~~~~ 830 (1027)
.|....||++...+| .+++|+...... ..|+++++.+.. |.+++++.. ....+..++||+|++|
T Consensus 33 ~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G 105 (339)
T 3i1a_A 33 ADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHA 105 (339)
T ss_dssp SCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCC
T ss_pred CccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCC
Confidence 334679999987777 899998765431 345666666532 224444432 2334677999999998
Q ss_pred CCH
Q 048205 831 GSL 833 (1027)
Q Consensus 831 gsL 833 (1027)
..+
T Consensus 106 ~~~ 108 (339)
T 3i1a_A 106 PNG 108 (339)
T ss_dssp CBT
T ss_pred CcC
Confidence 755
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.33 E-value=0.005 Score=56.90 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=38.9
Q ss_pred EEEccccccC-CcCcccccCCCCCCeeecCCCcccCCCCcccCCcccccEEecCCCCCCC
Q 048205 368 ELSLSGNNFS-GTIPSFIFNTSKLSTLELQRNSFSGFIPNTFGNLRNLKWLDLGDNYLTS 426 (1027)
Q Consensus 368 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 426 (1027)
.++.+++.++ ..+|..+ ..+|++|+|++|+|+.+.+..|..+++|+.|+|++|.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 5666666664 2344332 2357777888888877777778888888888888887764
No 444
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.25 E-value=0.0047 Score=57.07 Aligned_cols=56 Identities=23% Similarity=0.257 Sum_probs=29.1
Q ss_pred EEEccccccc-eeCcccccCCCCCCEEEccCcccCCccCccccCCCCCCeEeCCccccc
Q 048205 54 GLHLRGNKLQ-GEIPEELGNLAELEELWLQNNFLTGTIPSSIFNLSSLSNLDLSVNNLT 111 (1027)
Q Consensus 54 ~L~L~~n~i~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 111 (1027)
.++.++++++ ..+|..+. .+|++|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4444444443 13333322 24556666666665444455556666666666666554
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.79 E-value=0.019 Score=63.88 Aligned_cols=140 Identities=15% Similarity=0.160 Sum_probs=82.8
Q ss_pred cceeeccccceEEEEEecC--------CceEEEEEEecccch---------h---------HHHHHHHHHHHhhcc-CCc
Q 048205 755 NNLIGRGGFGFVYKARIQD--------GMEVAVKVFDLQYGR---------A---------IKSFDIECGMIKRIR-HRN 807 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~---------~---------~~~~~~e~~~l~~l~-h~n 807 (1027)
.+.+..|-...+|++...+ ++.|.+++....... . ......|.++++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3567778888999998753 367999987543211 0 112234888888885 334
Q ss_pred cceEEeEEecCCeeEEEEEecCCCCHHH--H---------------HhcCC----ccCC--HHHHHHHHHHHH-------
Q 048205 808 IIKFISSCSSDDFKALVLEYMPYGSLEK--C---------------LYSSN----YILD--IFQRLNIMIDVA------- 857 (1027)
Q Consensus 808 iv~l~~~~~~~~~~~lV~e~~~~gsL~~--~---------------l~~~~----~~~~--~~~~~~i~~~i~------- 857 (1027)
..++++++.. .+|+||++|-+|.. . +|... .... +....++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5567776643 38999998754411 1 12211 1122 223333333221
Q ss_pred ---------------HHH----HHhhc-CCCCCeEeccCCCCcEEEcCC------CcEEEeeecCCc
Q 048205 858 ---------------SAL----EYLHF-GYSVPIIHCDLKPNNVLLDDN------MVAHLSDFGMAK 898 (1027)
Q Consensus 858 ---------------~~l----~~LH~-~~~~~ivH~Dlkp~NIll~~~------~~~kl~Dfgla~ 898 (1027)
+-+ +++.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 22321 124568899999999999877 789999998875
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.00 E-value=0.027 Score=63.41 Aligned_cols=74 Identities=11% Similarity=0.155 Sum_probs=49.5
Q ss_pred cceeeccccceEEEEEecC--------CceEEEEEEecccchhHHHHHHHHHHHhhccCCc-cceEEeEEecCCeeEEEE
Q 048205 755 NNLIGRGGFGFVYKARIQD--------GMEVAVKVFDLQYGRAIKSFDIECGMIKRIRHRN-IIKFISSCSSDDFKALVL 825 (1027)
Q Consensus 755 ~~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lV~ 825 (1027)
.+.+..|-...+|++...+ ++.|++|+..... .......+|.++++.+...+ ..++++.+. -+.||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 4567788899999998653 5789999865332 22223457888888885333 345665432 27899
Q ss_pred EecCCCCH
Q 048205 826 EYMPYGSL 833 (1027)
Q Consensus 826 e~~~~gsL 833 (1027)
||++|..+
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.15 E-value=0.24 Score=55.48 Aligned_cols=29 Identities=28% Similarity=0.400 Sum_probs=24.8
Q ss_pred CeEeccCCCCcEEE------cCCCcEEEeeecCCc
Q 048205 870 PIIHCDLKPNNVLL------DDNMVAHLSDFGMAK 898 (1027)
Q Consensus 870 ~ivH~Dlkp~NIll------~~~~~~kl~Dfgla~ 898 (1027)
.++|+|+.+.||++ +++..++++||..|.
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~ 279 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence 35799999999999 456789999999886
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=79.25 E-value=5.9 Score=39.40 Aligned_cols=84 Identities=12% Similarity=0.093 Sum_probs=59.3
Q ss_pred cCCccceEEeEEecCCeeEEEEEecCCCCHHHHHhcCCccCCHHHHHHHHHHHHHHHH-HhhcCCCCCeEeccCCCCcEE
Q 048205 804 RHRNIIKFISSCSSDDFKALVLEYMPYGSLEKCLYSSNYILDIFQRLNIMIDVASALE-YLHFGYSVPIIHCDLKPNNVL 882 (1027)
Q Consensus 804 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~Dlkp~NIl 882 (1027)
.||++ -...-.+++.+.+.++.-+++.=...++ ..+...+++++..|+...+ +++ .-+|--++|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57877 4444466777777777653332222333 2688889999888887666 444 4577789999999
Q ss_pred EcCCCcEEEeeecCCc
Q 048205 883 LDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 883 l~~~~~~kl~Dfgla~ 898 (1027)
+|.++.+++.-.|+-.
T Consensus 117 f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 117 FNRALEPFFLHVGVKE 132 (219)
T ss_dssp ECTTCCEEESCCEETT
T ss_pred EeCCCcEEEEEcCCcc
Confidence 9999999998777643
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=74.09 E-value=4.9 Score=39.82 Aligned_cols=117 Identities=11% Similarity=0.142 Sum_probs=76.8
Q ss_pred cCCccceEEeEEecCCeeEEEEEecCCC-CHHHHHhcCCccCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCcEE
Q 048205 804 RHRNIIKFISSCSSDDFKALVLEYMPYG-SLEKCLYSSNYILDIFQRLNIMIDVASALEYLHFGYSVPIIHCDLKPNNVL 882 (1027)
Q Consensus 804 ~h~niv~l~~~~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlkp~NIl 882 (1027)
.||+.++. .+-.+.+.+.+.++.-+.+ ++.. +. ..+...+++++..|+...++++ .-+|--++|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 58888866 4556666665555544321 2222 32 3688899999999998886665 3477789999999
Q ss_pred EcCCCcEEEeeecCCcccccCCCcceecccccCccccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCCC
Q 048205 883 LDDNMVAHLSDFGMAKPFLKEDQSLTQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLMETFTRKKPTDES 955 (1027)
Q Consensus 883 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~elltg~~p~~~~ 955 (1027)
++.++.+++.-.|+...+ +|. ..+...=.-.+=+++..+++++..|+.-
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~l 160 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDAL 160 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHHH
T ss_pred EcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 999999999877754322 121 1111112234677888899998887643
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=61.70 E-value=1.2 Score=50.66 Aligned_cols=60 Identities=8% Similarity=-0.016 Sum_probs=17.4
Q ss_pred ccceeeccccceEEEEEecC-CceEEE------EEEeccc--chhHHHHHHHHHHHhhccCCccceEEeEEe
Q 048205 754 ENNLIGRGGFGFVYKARIQD-GMEVAV------KVFDLQY--GRAIKSFDIECGMIKRIRHRNIIKFISSCS 816 (1027)
Q Consensus 754 ~~~~lG~G~~g~V~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 816 (1027)
..+.+| ||+||+|.+.. ..+||| |..+... .+....+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345676 99999999764 467888 6554221 222346777888889999999999877653
No 451
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=48.65 E-value=1.8e+02 Score=34.33 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=47.5
Q ss_pred eEEeEEecCCeeEEEEEecCCCCHHHHHhcCC--------------ccC--CHHHHHHHHHHHHH--HHHHhhcCCCCCe
Q 048205 810 KFISSCSSDDFKALVLEYMPYGSLEKCLYSSN--------------YIL--DIFQRLNIMIDVAS--ALEYLHFGYSVPI 871 (1027)
Q Consensus 810 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~--~~~~~~~i~~~i~~--~l~~LH~~~~~~i 871 (1027)
+.|.+........ +.|+++..++.+.+...+ ..+ ....+..++..+|- .+.|+= .
T Consensus 477 ~~Y~Vipls~~~G-LIE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL---G--- 549 (696)
T 2x6h_A 477 TPYKVLATSSKHG-FLQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL---G--- 549 (696)
T ss_dssp CCCCEEESSTTCE-EEECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH---T---
T ss_pred eccEEEeccCCCC-eeeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc---c---
Confidence 3344444444333 346666656665543321 001 12344555555443 344554 2
Q ss_pred EeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 872 IHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 872 vH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
-+|=+++|||++.+|++.=+|||.+-
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 26889999999999999999999874
No 452
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=41.93 E-value=3.1e+02 Score=31.68 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=49.8
Q ss_pred ceEEeEEecCCeeEEEEEecCCCCHHHHHhcCC--------------c--cCCHHHHHHHHHHHHH--HHHHhhcCCCCC
Q 048205 809 IKFISSCSSDDFKALVLEYMPYGSLEKCLYSSN--------------Y--ILDIFQRLNIMIDVAS--ALEYLHFGYSVP 870 (1027)
Q Consensus 809 v~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~--~~~~~~~~~i~~~i~~--~l~~LH~~~~~~ 870 (1027)
+..|.+........ +.|++++.++.+.+...+ . ...+..+..++..+|. .+.|+= .-
T Consensus 402 i~~Y~Vipls~~~G-lIE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL---Gi- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHG-FMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL---GV- 476 (614)
T ss_dssp CCCCCEEESSSSEE-EEECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH---TC-
T ss_pred eeccEEEEecCCCc-eEEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee---ec-
Confidence 34455555554444 467777655555443211 0 1124455555555443 355555 22
Q ss_pred eEeccCCCCcEEEcCCCcEEEeeecCCc
Q 048205 871 IIHCDLKPNNVLLDDNMVAHLSDFGMAK 898 (1027)
Q Consensus 871 ivH~Dlkp~NIll~~~~~~kl~Dfgla~ 898 (1027)
+|=+++|||++.+|++.=+|||.+-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=34.49 E-value=76 Score=26.92 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=18.3
Q ss_pred cCcccccCCCCCcEEEccCCccccccCccccCCCCCcEEEcc
Q 048205 138 KIPSTLLRCKHLQTLSLSINDFSGDIPKEIGNLTKLKYLHLD 179 (1027)
Q Consensus 138 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 179 (1027)
+-..+|.++++|+.+.+-.+ ++.+-..+|.++.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33444555555555544433 222333444444444444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.90 E-value=45 Score=28.35 Aligned_cols=40 Identities=10% Similarity=-0.046 Sum_probs=15.9
Q ss_pred cCCccccCcCcccceeccCcccccccCccccccCCcceEEc
Q 048205 306 VIPHEIDNLHNLEWMIFSFNKLVGVVPTTIFNVSTLKFLYL 346 (1027)
Q Consensus 306 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 346 (1027)
+...+|.++.+|+.+.+-.+ ++.+-..+|.++.+|+.+.+
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 33344444444444444332 23333334444444444433
No 455
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=28.02 E-value=1.1e+02 Score=32.42 Aligned_cols=75 Identities=19% Similarity=0.142 Sum_probs=40.9
Q ss_pred eeEEEEEecCCCCHHHHHhcC-CccCCHHHHHHHHHHH--HHHHHHhhcCCCC-CeEe-ccCCCCcEEEcCCCc-EEEee
Q 048205 820 FKALVLEYMPYGSLEKCLYSS-NYILDIFQRLNIMIDV--ASALEYLHFGYSV-PIIH-CDLKPNNVLLDDNMV-AHLSD 893 (1027)
Q Consensus 820 ~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i--~~~l~~LH~~~~~-~ivH-~Dlkp~NIll~~~~~-~kl~D 893 (1027)
...++|||++|..|.+.-+.. ...+.... +.++ +-++++.....++ ..+. .-=.++|||++.++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 456999999976665431110 01122222 2222 2234444433233 2221 225789999987554 88999
Q ss_pred ecCCc
Q 048205 894 FGMAK 898 (1027)
Q Consensus 894 fgla~ 898 (1027)
-+.+.
T Consensus 232 hn~af 236 (342)
T 1cja_A 232 SKIIP 236 (342)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99886
Done!