BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048215
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23530|SNC1_ARATH Protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1 OS=Arabidopsis
thaliana GN=SNC1 PE=1 SV=3
Length = 1301
Score = 172 bits (437), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 119/371 (32%), Positives = 183/371 (49%), Gaps = 74/371 (19%)
Query: 1 SRSSTKKYDVFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKA 60
S S +++YDVF SFRGED D F SHL L + I TFIDD++ R I L+ AIK
Sbjct: 5 SSSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAI-TFIDDEIERSRSIGPELLSAIKE 63
Query: 61 SAISVIIFSEDYASSRWCLDELAEILECKKEHAQIY-----------VRNQTGSFGDSFS 109
S I+++IFS++YASS WCL+EL EI +C Q+ V+ QTG FG F
Sbjct: 64 SRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGKVF- 122
Query: 110 KLEERFEKNSE-KLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLEEVFRP 168
EE + SE + Q+W++ L VA ++G+ R E+ +I E+ ++L++ P
Sbjct: 123 --EETCKAKSEDEKQSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRK----TMTP 176
Query: 169 RDNKSQLVGVESRVEEIESLLSVESKDVYAL-------GFGASVDENAI----------- 210
D+ LVG+E+ +E I+S+L +ESK+ + G G S A+
Sbjct: 177 SDDFGDLVGIENHIEAIKSVLCLESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQFHHR 236
Query: 211 --------PGNDLNS----------------------------RRLSCMKVLIVFDDVTC 234
G+D++ +RL KVLI+ DDV
Sbjct: 237 AFITYKSTSGSDVSGMKLRWEKELLSEILGQKDIKIEHFGVVEQRLKQQKVLILLDDVDS 296
Query: 235 FSQLESIIGSLDWLMPVSRTIITTRNKQVLRNWGVRKICEMEALEYHHALELFSRHAFKQ 294
L++++G +W SR I+ T+++Q+L+ + I E+E H AL + R AF +
Sbjct: 297 LEFLKTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGK 356
Query: 295 NHPDVGYAELS 305
+ P + EL+
Sbjct: 357 DSPPDDFKELA 367
>sp|O82500|Y4117_ARATH Putative disease resistance protein At4g11170 OS=Arabidopsis
thaliana GN=At4g11170 PE=2 SV=1
Length = 1095
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 175/365 (47%), Gaps = 73/365 (20%)
Query: 1 SRSSTKKYDVFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKA 60
S S++ +YDVF SFRGED ++F SHL + I TF DD + R + I L AI+
Sbjct: 4 SSSNSWRYDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDDHIKRSHTIGHELRAAIRE 63
Query: 61 SAISVIIFSEDYASSRWCLDELAEILECKKEHA----QIY-------VRNQTGSFGDSFS 109
S ISV++FSE+YASS WCLDEL EI++CK+E ++ +R QTG FG SF
Sbjct: 64 SKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSF- 122
Query: 110 KLEERFEKNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLEEVFRPR 169
LE K E+ WR+ L + A + G H ++ E+ I + ++L++L P
Sbjct: 123 -LETCCGKTEERQHNWRRALTDAANILGDHPQNWDNEAYKITTISKDVLEKLNAT---PS 178
Query: 170 DNKSQLVGVESRVEEIESLLSVESKDVYALGF--GASVDENAIP---------------- 211
+ + LVG+E+ + ++ESLL +ES+ V +G A V + I
Sbjct: 179 RDFNDLVGMEAHIAKMESLLCLESQGVRIVGIWGPAGVGKTTIARALYNQYHENFNLSIF 238
Query: 212 --------------------------------GNDLNSRRLSCM-------KVLIVFDDV 232
DL R L + KVLI+ DDV
Sbjct: 239 MENVRESYGEAGLDDYGLKLHLQQRFLSKLLDQKDLRVRHLGAIEERLKSQKVLIILDDV 298
Query: 233 TCFSQLESIIGSLDWLMPVSRTIITTRNKQVLRNWGVRKICEMEALEYHHALELFSRHAF 292
QL+++ W SR ++TT+NKQ+L + + + ++ AL +F +HAF
Sbjct: 299 DNIEQLKALAKENQWFGNKSRIVVTTQNKQLLVSHDINHMYQVAYPSKQEALTIFCQHAF 358
Query: 293 KQNHP 297
KQ+ P
Sbjct: 359 KQSSP 363
>sp|Q40392|TMVRN_NICGU TMV resistance protein N OS=Nicotiana glutinosa GN=N PE=1 SV=1
Length = 1144
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 120/205 (58%), Gaps = 15/205 (7%)
Query: 8 YDVFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQ-LNRGYEISESLVKAIKASAISVI 66
YDVF+SFRGEDT FTSHLY L+ + I+TF DD+ L G I L KAI+ S +++
Sbjct: 12 YDVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIV 71
Query: 67 IFSEDYASSRWCLDELAEILECKKEHAQI-----------YVRNQTGSFGDSFSKLEERF 115
+FSE+YA+SRWCL+EL +I+ECK Q +VRNQ SF +F + E ++
Sbjct: 72 VFSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHVRNQKESFAKAFEEHETKY 131
Query: 116 EKNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLEEVFRPRDNKSQL 175
+ + E +Q WR L E A L G + +++ I ++V+ I +L + N +
Sbjct: 132 KDDVEGIQRWRIALNEAANLKGSCDNRDKTDADCIRQIVDQISSKLCKISLSYLQN---I 188
Query: 176 VGVESRVEEIESLLSVESKDVYALG 200
VG+++ +E+IESLL + V +G
Sbjct: 189 VGIDTHLEKIESLLEIGINGVRIMG 213
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 212 GNDLNSRRLSCMKVLIVFDDVTCFSQ-LESIIGSLDWLMPVSRTIITTRNKQVLRNWGVR 270
G + RL KVLIV DD+ LE + G LDW SR IITTR+K ++ +
Sbjct: 283 GKHQMASRLRSKKVLIVLDDIDNKDHYLEYLAGDLDWFGNGSRIIITTRDKHLIEKNDI- 341
Query: 271 KICEMEALEYHHALELFSRHAFKQNHPDVGYAELS 305
I E+ AL H +++LF +HAF + P+ + +LS
Sbjct: 342 -IYEVTALPDHESIQLFKQHAFGKEVPNENFEKLS 375
>sp|Q9FHE9|P2A08_ARATH Protein PHLOEM PROTEIN 2-LIKE A8 OS=Arabidopsis thaliana GN=PP2A8
PE=2 SV=1
Length = 354
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 2 RSSTKKYDVFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKAS 61
R + VF++FRG+D + F S L A+ NI FID G ++ V+ I+ S
Sbjct: 8 RPTPTGPQVFINFRGKDLRNGFLSFLEPAMREANINVFIDKDEVVGTDLVNLFVR-IQES 66
Query: 62 AISVIIFSEDYASSRWCLDELAEILECKKEH-----------AQIYVRNQTGSFGDSFSK 110
++V+IFS+DY SS WCLDELAEI +C + A V G FGD+F
Sbjct: 67 RVAVVIFSKDYTSSEWCLDELAEIKDCINQGGLNAIPIFYKLAPSSVLELKGGFGDTFRV 126
Query: 111 LEERFEKNSEKLQTWRKGLREVAGLSGFHY--RSIRPESELINEVVNNILKRLLE 163
L+E+++ + E+ Q W++ L + L G +S R E E +NE++ I K L +
Sbjct: 127 LKEKYKNDPERTQKWQEALESIPKLKGLRLAEKSDRNEREFMNEMILEIQKALWQ 181
>sp|Q9C5Q9|P2A05_ARATH Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5
PE=2 SV=1
Length = 411
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 14/138 (10%)
Query: 10 VFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRG-YEISESLVKAIKASAISVIIF 68
VF++FRG+D F S L AL ++ I FID+Q RG Y IS L I S I+++IF
Sbjct: 24 VFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLIS--LFDTIGESKIALVIF 81
Query: 69 SEDYASSRWCLDELAEILECKKEHAQI-----------YVRNQTGSFGDSFSKLEERFEK 117
SE Y S WC+DEL +I E ++ I V++ TG FGD+F L ++++
Sbjct: 82 SEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQP 141
Query: 118 NSEKLQTWRKGLREVAGL 135
+KL W + L V L
Sbjct: 142 EPKKLHKWTEALFSVCEL 159
>sp|Q9SZ67|WRK19_ARATH Probable WRKY transcription factor 19 OS=Arabidopsis thaliana
GN=WRKY19 PE=2 SV=1
Length = 1895
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 156/349 (44%), Gaps = 88/349 (25%)
Query: 3 SSTKKYDVFVSF-RGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKAS 61
SS+K YDV + + R + + +DF SHL ++L R+ I + ++ N V A+
Sbjct: 663 SSSKDYDVVIRYGRADISNEDFISHLRASLCRRGISVY--EKFNE--------VDALPKC 712
Query: 62 AISVIIFSEDYASSRWCLDELAEILECKKEHAQ------IYVRNQTGSFGDSFSKLEERF 115
+ +I+ + Y S L ILE +H + I+ R F + SK ERF
Sbjct: 713 RVLIIVLTSTYVPS-----NLLNILE--HQHTEDRVVYPIFYRLSPYDFVCN-SKNYERF 764
Query: 116 EKNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLEEVFRPRDNKSQL 175
E + W+ L+E+ + G+ + ESELI+E+V + LK L +K +
Sbjct: 765 YLQDEP-KKWQAALKEITQMPGYTLTD-KSESELIDEIVRDALKVLCSA------DKVNM 816
Query: 176 VGVESRVEEIESLLSVESKDVYAL------GFGAS------------------------- 204
+G++ +VEEI SLL +ES DV ++ G G +
Sbjct: 817 IGMDMQVEEILSLLCIESLDVRSIGIWGTVGIGKTTIAEEIFRKISVQYETCVVLKDLHK 876
Query: 205 --------------------VDENAIPGNDLNSR----RLSCMKVLIVFDDVTCFSQLES 240
V+ + I +D+ + RL ++L++ DDV + +++
Sbjct: 877 EVEVKGHDAVRENFLSEVLEVEPHVIRISDIKTSFLRSRLQRKRILVILDDVNDYRDVDT 936
Query: 241 IIGSLDWLMPVSRTIITTRNKQVLRNWGVRKICEMEALEYHHALELFSR 289
+G+L++ P SR I+T+RN++V + + E++ L+ +L L R
Sbjct: 937 FLGTLNYFGPGSRIIMTSRNRRVFVLCKIDHVYEVKPLDIPKSLLLLDR 985
>sp|Q9FHE8|P2A06_ARATH Protein PHLOEM PROTEIN 2-LIKE A6 OS=Arabidopsis thaliana GN=PP2A6
PE=2 SV=1
Length = 392
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 111/231 (48%), Gaps = 26/231 (11%)
Query: 10 VFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFS 69
VF+ FRG D F S L AL NI FID+ G E++ +L+ I+ S ++++IFS
Sbjct: 17 VFICFRGADVRKHFISFLVPALREANINVFIDENEFLGSEMA-NLLTRIEESELALVIFS 75
Query: 70 EDYASSRWCLDELAEILECKKEHAQIY-----------VRNQTGSFGDSFSKLEERFEKN 118
D+ S CL+ELA+I E K + I V+ G FGD+F LE
Sbjct: 76 VDFTRSHRCLNELAKIKERKDQGRLIVIPIFYKVKPSAVKFLEGKFGDNFRALERNNRHM 135
Query: 119 SEKLQTWRKGLREVAGLSGFHY--RSIRPESELINEVVNNILKRLLEEVFRPRDN----K 172
Q W++ L + G G +S R +++ IN +V I ++LLE + R+N +
Sbjct: 136 LPITQKWKEALESIPGSIGMPLAEQSERTDNDFINSMVIKI-QQLLENMAVRRNNEIEAQ 194
Query: 173 SQLVG-VESRVEEIE------SLLSVESKDVYALGFGASVDENAIPGNDLN 216
+LV V + + E S++ + A G+SV + +P DL+
Sbjct: 195 RKLVSIVPPKKPKGEANPQGGSMVPARKPEREASQEGSSVVPSMVPARDLD 245
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 14/141 (9%)
Query: 4 STKKYDVFVSFRGEDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAI 63
+ +Y VF++FRG++ + F L A+ + I F D+ RG ++ L + I+ S +
Sbjct: 354 TLPQYQVFINFRGDELRNSFVGFLVKAMRLEKINVFTDEVELRGTNLN-YLFRRIEESRV 412
Query: 64 SVIIFSEDYASSRWCLDELAEILECKKEHAQI------YVRNQT------GSFGDSFSKL 111
+V IFSE Y S WCLDEL ++ E + E ++ Y N T G+FGD+ L
Sbjct: 413 AVAIFSERYTESCWCLDELVKMKE-QMEQGKLVVVPVFYRLNATACKRFMGAFGDNLRNL 471
Query: 112 EERFEKNSEKLQTWRKGLREV 132
E + E++Q W++ L V
Sbjct: 472 EWEYRSEPERIQKWKEALSSV 492
>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
GN=WRKY16 PE=2 SV=1
Length = 1372
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 83/321 (25%)
Query: 23 FTSHLYSALSRQNIQ-TFIDDQLNRGYEISESLVKAIKASAISVIIFSEDYASSRWCLDE 81
F SHL AL R+ + FID + E S+S+V+ + +SV+I + S LD+
Sbjct: 20 FVSHLSKALQRKGVNDVFIDSDDSLSNE-SQSMVERAR---VSVMILPGNRTVS---LDK 72
Query: 82 LAEILECKKEHAQIYVRNQTGSFGDSFSKLEERFEKNSEKLQTWRKGLREVAGLSGFHYR 141
L ++L+C+K Q+ V G ++SE W L S H R
Sbjct: 73 LVKVLDCQKNKDQVVVPVLYGV-------------RSSET--EWLSALDSKGFSSVHHSR 117
Query: 142 SIRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRVEEIESLL------------ 189
+S+L+ E V ++ ++L + +G+ S++ EIE ++
Sbjct: 118 KECSDSQLVKETVRDVYEKLF---------YMERIGIYSKLLEIEKMINKQPLDIRCVGI 168
Query: 190 ----------------------------------SVESKDVYALGFGASVDENA-----I 210
+++ K VY L + ENA +
Sbjct: 169 WGMPGIGKTTLAKAVFDQMSGEFDAHCFIEDYTKAIQEKGVYCLLEEQFLKENAGASGTV 228
Query: 211 PGNDLNSRRLSCMKVLIVFDDVTCFSQLESIIGSLDWLMPVSRTIITTRNKQVLRNWGVR 270
L RL+ +VL+V DDV +ES +G DW P S IIT+++K V R V
Sbjct: 229 TKLSLLRDRLNNKRVLVVLDDVRSPLVVESFLGGFDWFGPKSLIIITSKDKSVFRLCRVN 288
Query: 271 KICEMEALEYHHALELFSRHA 291
+I E++ L AL+LFS A
Sbjct: 289 QIYEVQGLNEKEALQLFSLCA 309
>sp|Q9FH83|WRK52_ARATH Probable WRKY transcription factor 52 OS=Arabidopsis thaliana
GN=WRKY52 PE=2 SV=3
Length = 1288
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 133/317 (41%), Gaps = 80/317 (25%)
Query: 23 FTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFSEDYASSRWCLDEL 82
F SHL AL R+ I + D ES K I+ + +SV++ + S LD+
Sbjct: 23 FVSHLSEALRRKGINNVVVDVDIDDLLFKESQAK-IEKAGVSVMVLPGNCDPSEVWLDKF 81
Query: 83 AEILECK---KEHAQIYVRNQTGSFGDSFSKLEERFEKNSEKLQTWRKGLREVAGLSGFH 139
A++LEC+ K+ A + V +GDS + W L + GLS H
Sbjct: 82 AKVLECQRNNKDQAVVSVL-----YGDSLLR------------DQWLSEL-DFRGLSRIH 123
Query: 140 Y-RSIRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRVEEIESLLSVESKDVYA 198
R +S L+ E+V ++ + + R +G+ S++ EIE++++ + +
Sbjct: 124 QSRKECSDSILVEEIVRDVYE---THFYVGR------IGIYSKLLEIENMVNKQPIGIRC 174
Query: 199 LG-----------------------FGAS------------------VDENAIPGNDLNS 217
+G F AS ++E +PGND
Sbjct: 175 VGIWGMPGIGKTTLAKAVFDQMSSAFDASCFIEDYDKSIHEKGLYCLLEEQLLPGNDATI 234
Query: 218 RRLSCMK-------VLIVFDDVTCFSQLESIIGSLDWLMPVSRTIITTRNKQVLRNWGVR 270
+LS ++ VL+V DDV ES + DWL P S IIT+R+KQV G+
Sbjct: 235 MKLSSLRDRLNSKRVLVVLDDVRNALVGESFLEGFDWLGPGSLIIITSRDKQVFCLCGIN 294
Query: 271 KICEMEALEYHHALELF 287
+I E++ L A +LF
Sbjct: 295 QIYEVQGLNEKEARQLF 311
>sp|Q9FKN7|DAR4_ARATH Protein DA1-related 4 OS=Arabidopsis thaliana GN=DAR4 PE=1 SV=2
Length = 1613
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 133/347 (38%), Gaps = 77/347 (22%)
Query: 17 EDTLDDFTSHLYSALSRQNIQTFIDD---QLNRGYEISESLVKAIKASAISVIIFSEDYA 73
E L SHL +AL R+ I F+D Q + + I ++ A + V+I E
Sbjct: 26 ETVLHSLVSHLSAALRREGISVFVDACGLQETKFFSIKQNQPLTDGARVLVVVISDEVEF 85
Query: 74 SSRWCLDELAEILECKKEHAQIYVRNQTGSFGDSFSKLEERFEKNSEKLQTWRKGLREVA 133
W + ++++ + + + V G DS +++ +W + + +
Sbjct: 86 YDPW-FPKFLKVIQGWQNNGHVVVPVFYGV--DSLTRV-------YGWANSWLEAEKLTS 135
Query: 134 GLSGFHYRSIRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRVEEIESLLSVES 193
S ++ +SEL+ E+V ++ +L ++ VG+ +R+ EIE LL +
Sbjct: 136 HQSKILSNNVLTDSELVEEIVRDVYGKLY---------PAERVGIYARLLEIEKLLYKQH 186
Query: 194 KDVYAL------GFGASVDENAIPGNDLNSRRLSCM------------------------ 223
+D+ ++ G G + A+ + SC
Sbjct: 187 RDIRSIGIWGMPGIGKTTLAKAVFNHMSTDYDASCFIENFDEAFHKEGLHRLLKERIGKI 246
Query: 224 -------------------------KVLIVFDDVTCFSQLESIIGSLDWLMPVSRTIITT 258
++L+V DDV ES + LDW S IIT+
Sbjct: 247 LKDEFDIESSYIMRPTLHRDKLYDKRILVVLDDVRDSLAAESFLKRLDWFGSGSLIIITS 306
Query: 259 RNKQVLRNWGVRKICEMEALEYHHALELFSRHAFKQNHPDVGYAELS 305
+KQV + +I ++ L H AL+LFS+ F N P+ +LS
Sbjct: 307 VDKQVFAFCQINQIYTVQGLNVHEALQLFSQSVFGINEPEQNDRKLS 353
>sp|Q8THC4|AROD_METAC 3-dehydroquinate dehydratase OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=aroD PE=3
SV=1
Length = 242
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Query: 22 DFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFSEDYA---SSRWC 78
D T L + LS ++ +D +L+ E + ++KA KA +VII S D++ S +
Sbjct: 87 DRTELLVALLSLKDGPDAVDIELSASREDRDKVIKAAKAHGKTVIISSHDFSKTPSPQEM 146
Query: 79 LDELAEILECKKEHAQIYVRNQTGSFGDSFSKLEERFE-KNSEKLQTWRKGLREVAGLSG 137
LAE+ + + A+I V GS D + L+ E KN T + G G
Sbjct: 147 TATLAEMFLAEADIAKIAV--MPGSMEDVLNLLKVTLEFKN-----TGKTVCTIAMGKPG 199
Query: 138 FHYRSIRP 145
H R + P
Sbjct: 200 KHTRVVAP 207
>sp|P61348|GATB_TREDE Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
OS=Treponema denticola (strain ATCC 35405 / CIP 103919 /
DSM 14222) GN=gatB PE=3 SV=1
Length = 493
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 65 VIIFSEDYASSRWCLDELAEILECKKEHAQIYVRNQTGSFGDS--FSKL-EERFEKNSEK 121
V + E +S+ D AE++ C K+ + + DS K+ EE F +N+E
Sbjct: 392 VNVIEEGKITSKQAKDVFAEMIACGKKPSAVIAEKGMEQVSDSSFIEKIVEEVFAENAEA 451
Query: 122 LQTWRKGLREVAG 134
+Q W+ G VAG
Sbjct: 452 VQDWKNGKTNVAG 464
>sp|Q9FHE5|P2A07_ARATH Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis
thaliana GN=PP2A7 PE=4 SV=1
Length = 332
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 17 EDTLDDFTSHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFSEDYASSR 76
ED + L L +NI FID++ RG + ++L K I+ S IS+ IFSE S+
Sbjct: 51 EDVSKGLINFLEPVLQNKNINVFIDEEEVRGKGL-KNLFKRIQDSKISLAIFSE----SK 105
Query: 77 WCLDELAEILECKKEHAQIYVR-NQTGSFGD 106
++L + E E I+ + + TG D
Sbjct: 106 CDFNDLLKNNESADEAIPIFYKVDATGDLAD 136
>sp|Q9UKU9|ANGL2_HUMAN Angiopoietin-related protein 2 OS=Homo sapiens GN=ANGPTL2 PE=2 SV=1
Length = 493
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 143 IRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRV-EEIESLLSVESK 194
+R ES +N V + +LL E+ R RDN +L +E+R+ + +L + SK
Sbjct: 123 LRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENRILNQTADMLQLASK 175
>sp|Q19317|NBEA_CAEEL Putative neurobeachin homolog OS=Caenorhabditis elegans GN=sel-2
PE=2 SV=3
Length = 2507
Score = 32.7 bits (73), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 25 SHLYSALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFSEDYASSRWC 78
+H YS R +I+ FID QL E+S + A S+ + ++ A+S +C
Sbjct: 404 AHCYSRWGRSDIKCFIDGQLAETIELSWVVTSATNWDRCSIGVSADGTANSAFC 457
>sp|Q9R045|ANGL2_MOUSE Angiopoietin-related protein 2 OS=Mus musculus GN=Angptl2 PE=2 SV=2
Length = 493
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 143 IRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRV-EEIESLLSVESK 194
+R ES +N V + +LL E+ R RDN +L +E+R+ + +L + SK
Sbjct: 123 LRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENRILNQTADMLQLASK 175
>sp|O35892|SP100_MOUSE Nuclear autoantigen Sp-100 OS=Mus musculus GN=Sp100 PE=1 SV=2
Length = 482
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 95 IYVRNQTGSFGDSFSKLEERFEKNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVV 154
IYVR+ G G F+ ++ E N EK + WR+ +R G+ R ELI + V
Sbjct: 408 IYVRSIRGKTGRLFTPMDFEIEGNCEKAKNWRQSIR----CKGWTLR------ELIQKGV 457
Query: 155 NNILKRLLEEVFR-PRDNKSQL 175
R +E R PR + Q+
Sbjct: 458 LQDPPRKKKETPRNPRQTRRQV 479
>sp|Q7VYV6|CLPB_BORPE Chaperone protein ClpB OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=clpB PE=3 SV=1
Length = 865
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 108 FSKLEERFEKNSEKLQTWRKGLREVAGLSGFHYR-SIRPESELINEVVNN-ILKRLLEEV 165
+L ER EK +L L E+A SGF RP I + + N + K +LE V
Sbjct: 784 LKRLGERLEKQEMRLDVSDAALAEIA-RSGFDPVFGARPLKRAIQQQIENPVAKLILEGV 842
Query: 166 FRPRD 170
F PRD
Sbjct: 843 FGPRD 847
>sp|Q7WHB6|CLPB_BORBR Chaperone protein ClpB OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=clpB PE=3 SV=1
Length = 865
Score = 31.6 bits (70), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 108 FSKLEERFEKNSEKLQTWRKGLREVAGLSGFHYR-SIRPESELINEVVNN-ILKRLLEEV 165
+L ER EK +L L E+A SGF RP I + + N + K +LE V
Sbjct: 784 LKRLGERLEKQEMRLDVSDAALAEIA-RSGFDPVFGARPLKRAIQQQIENPVAKLILEGV 842
Query: 166 FRPRD 170
F PRD
Sbjct: 843 FGPRD 847
>sp|Q10491|SEC74_SCHPO Arf guanine nucleotide exchange factor sec74 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sec74 PE=1 SV=2
Length = 928
Score = 31.6 bits (70), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 52 ESLVKAIKASAISVI--IFSEDYASSRWCLDELAEILECKKEHAQIYVRNQTGSFGDSFS 109
ES K+IKAS +SV+ I+ + A S+ + +E+LEC K ++Y+ +
Sbjct: 693 ESSDKSIKAS-VSVLPDIYEDSDAMSKASKETRSEVLECSK--VRVYI------VQNRIY 743
Query: 110 KLEERFEKNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLE 163
KLEE + K+ R+ + L R+ + N + N+L +++E
Sbjct: 744 KLEEALRQGESKMTVQRRNAANILHLEPIQSRTRIRLARCSNTLKKNMLAQMIE 797
>sp|A1ANV1|GRPE_PELPD Protein GrpE OS=Pelobacter propionicus (strain DSM 2379) GN=grpE
PE=3 SV=1
Length = 190
Score = 31.2 bits (69), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 106 DSFSKLEERFE-KNSEKLQTWRKGLREVAGLSGFHYRSIRPESELINEVVNNILKRLLEE 164
+ S+LEE+ K +E + W + +RE A L F RS R + EL+N K LLEE
Sbjct: 34 ERISRLEEQLAAKEAECRENWDRFVRERADLENFRKRSNREKEELLNYGT----KSLLEE 89
Query: 165 VFRPRDN 171
+ DN
Sbjct: 90 ILPVVDN 96
>sp|P04958|TETX_CLOTE Tetanus toxin OS=Clostridium tetani (strain Massachusetts / E88)
GN=tetX PE=1 SV=2
Length = 1315
Score = 31.2 bits (69), Expect = 9.2, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 29 SALSRQNIQTFIDDQLNRGYEISESLVKAIKASAISVIIFS------EDYASSRWCLDEL 82
S+ ++ I ID+ L + YE + K +KA + + + Y S + +D +
Sbjct: 693 SSTQKEKIIKTIDNFLEKRYEKWIEVYKLVKAKWLGTVNTQFQKRSYQMYRSLEYQVDAI 752
Query: 83 AEILECKKEHAQIYVRNQTGSFGDSFSKLEERFEKNSEKLQTWRKGLREVAGLSGFHYRS 142
+I++ + +IY D + L+ + E+ + K + ++ F S
Sbjct: 753 KKIIDYE---YKIYSGPDKEQIADEINNLKNKLEEKANK---------AMININIFMRES 800
Query: 143 IRPESELINEVVNNILKRLLEEVFRPRDNKSQLVGVESRVEEIESLLSVESK 194
R S L+N+++N K+LLE + ++ Q + S+ I L +ESK
Sbjct: 801 SR--SFLVNQMINEAKKQLLEFDTQSKNILMQYIKANSKFIGITELKKLESK 850
>sp|Q9FZ06|ARK3_ARATH Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis
thaliana GN=ARK3 PE=1 SV=1
Length = 919
Score = 31.2 bits (69), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 104 FGDSFSKLEERFEKNSEKLQTWRKGLREVAGL--SGFHYRSIRPESELINEVVNNILKRL 161
+ +S KLEE + KN +KL R L E GL + RSI P E ++E LK+L
Sbjct: 486 YMESIKKLEENWSKNQKKLAAERLALGEKNGLDITSNGNRSIAPALEEVSE-----LKKL 540
Query: 162 LEE 164
L++
Sbjct: 541 LQK 543
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,875,685
Number of Sequences: 539616
Number of extensions: 4172300
Number of successful extensions: 13582
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 13522
Number of HSP's gapped (non-prelim): 79
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)