BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048219
(183 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 20 FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIK 76
FS EL+ +D F K +GRG G VYKG + + LVAV RL E+ E +FQTE++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN-AEKQP--NWIERTGIARD 133
+I HRNL+RL G+ + ++++LVY YM+NGS+A L E QP +W +R IA
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDE 163
ARG+ YLHD C+ +IIH D+K NIL+DE
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDE 177
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 124 bits (310), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/150 (46%), Positives = 96/150 (64%), Gaps = 6/150 (4%)
Query: 20 FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIK 76
FS EL+ +D F K +GRG G VYKG + + LVAV RL E+ E +FQTE++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN-AEKQP--NWIERTGIARD 133
+I HRNL+RL G+ + ++++LVY YM+NGS+A L E QP +W +R IA
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDE 163
ARG+ YLHD C+ +IIH D+K NIL+DE
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDE 169
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19 SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
SFS+ ELK +T+ F E K+G G G VYKG +N VAV +L ++D E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 67 REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
+++F EIKV+ + H NLV LLG+S + LVY YM NGSL D L + P +W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
R IA+ A GI +LH E IH DIK NIL+DE AK + + E
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19 SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
SFS+ ELK +T+ F E K+G G G VYKG +N VAV +L ++D E
Sbjct: 14 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 72
Query: 67 REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
+++F EIKV+ + H NLV LLG+S + LVY YM NGSL D L + P +W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
R IA+ A GI +LH E IH DIK NIL+DE AK + + E
Sbjct: 133 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 184
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 94/175 (53%), Gaps = 18/175 (10%)
Query: 19 SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
SFS+ ELK +T+ F E K+G G G VYKG +N VAV +L ++D E
Sbjct: 8 SFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 66
Query: 67 REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
+++F EIKV+ + H NLV LLG+S + LVY YM NGSL D L + P +W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
R IA+ A GI +LH E IH DIK NIL+DE AK + + E
Sbjct: 127 HMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 178
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 19 SFSYAELKKITDGFKE--------KVGRGSSGTVYKGAMINRQLVAVNRLEKVLD----E 66
SFS+ ELK +T+ F E K G G G VYKG +N VAV +L ++D E
Sbjct: 5 SFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEE 63
Query: 67 REREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP--NW 124
+++F EIKV + H NLV LLG+S + LVY Y NGSL D L + P +W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 125 IERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
R IA+ A GI +LH E IH DIK NIL+DE AK + + E
Sbjct: 124 HXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASE 175
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 8 DSNYSTLTTPFS---FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEK 62
D+ S+ PF +L++ T+ F K +G G G VYKG + + VA+ R
Sbjct: 14 DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP 73
Query: 63 VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--- 119
+ EF+TEI+ + H +LV L+G+ E ++ IL+Y+YM NG+L L+ ++
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+W +R I ARG+ YLH IIH D+K NIL+DEN K
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 8 DSNYSTLTTPFS---FSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEK 62
D+ S+ PF +L++ T+ F K +G G G VYKG + + VA+ R
Sbjct: 14 DALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTP 73
Query: 63 VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAE--- 119
+ EF+TEI+ + H +LV L+G+ E ++ IL+Y+YM NG+L L+ ++
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPT 133
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+W +R I ARG+ YLH IIH D+K NIL+DEN K
Sbjct: 134 MSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPK 179
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.1 bits (170), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLL 90
KEK+G GS GTV++ + +E+ ER EF E+ ++ R H N+V +
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 91 GYSLEVSKKILVYEYMSNGSLADILF--NAEKQPNWIERTGIARDIARGILYLHDECETQ 148
G + +V EY+S GSL +L A +Q + R +A D+A+G+ YLH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 149 IIHCDIKPQNILMDENRCAK 168
I+H D+K N+L+D+ K
Sbjct: 160 IVHRDLKSPNLLVDKKYTVK 179
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V+ G +N+ VA+ + K E +F E +V+ + H LV+L G
Sbjct: 31 FVQEIGSGQFGLVHLGYWLNKDKVAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 92 YSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDEC 145
LE + LV+E+M +G L+D LF AE G+ D+ G+ YL + C
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEAC 143
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+IH D+ +N L+ EN+ K
Sbjct: 144 ---VIHRDLAARNCLVGENQVIK 163
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +++G G G V+ G +N+ VA+ + E + E + F E +V+ + H LV+L
Sbjct: 9 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 66
Query: 91 GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
G LE + LV+E+M +G L+D LF AE G+ D+ G+ YL +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 120
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
C +IH D+ +N L+ EN+ K
Sbjct: 121 C---VIHRDLAARNCLVGENQVIK 141
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +++G G G V+ G +N+ VA+ + E + E + F E +V+ + H LV+L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 68
Query: 91 GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
G LE + LV+E+M +G L+D LF AE G+ D+ G+ YL +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 122
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
C +IH D+ +N L+ EN+ K
Sbjct: 123 C---VIHRDLAARNCLVGENQVIK 143
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 18/144 (12%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +++G G G V+ G +N+ VA+ + E + E + F E +V+ + H LV+L
Sbjct: 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
G LE + LV+E+M +G L+D LF AE G+ D+ G+ YL +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 125
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
C +IH D+ +N L+ EN+ K
Sbjct: 126 C---VIHRDLAARNCLVGENQVIK 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLL 90
KEK+G GS GTV++ + +E+ ER EF E+ ++ R H N+V +
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 91 GYSLEVSKKILVYEYMSNGSLADILF--NAEKQPNWIERTGIARDIARGILYLHDECETQ 148
G + +V EY+S GSL +L A +Q + R +A D+A+G+ YLH+
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPP 159
Query: 149 IIHCDIKPQNILMDENRCAK 168
I+H ++K N+L+D+ K
Sbjct: 160 IVHRNLKSPNLLVDKKYTVK 179
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
+E VGRG+ G V K A + VA+ ++E E ER+ F E++ + R +H N+V+L G
Sbjct: 13 EEVVGRGAFGVVCK-AKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 68
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR--DIARGILYLHDECETQI 149
L + LV EY GSL ++L AE P + ++ ++G+ YLH +
Sbjct: 69 ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 150 IHCDIKPQNILM 161
IH D+KP N+L+
Sbjct: 127 IHRDLKPPNLLL 138
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLG 91
+E VGRG+ G V K A + VA+ ++E E ER+ F E++ + R +H N+V+L G
Sbjct: 14 EEVVGRGAFGVVCK-AKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYG 69
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR--DIARGILYLHDECETQI 149
L + LV EY GSL ++L AE P + ++ ++G+ YLH +
Sbjct: 70 ACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 150 IHCDIKPQNILM 161
IH D+KP N+L+
Sbjct: 128 IHRDLKPPNLLL 139
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +++G G G V+ G +N+ VA+ + E + E + F E +V+ + H LV+L
Sbjct: 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 69
Query: 91 GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
G LE + LV E+M +G L+D LF AE G+ D+ G+ YL +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLEEA 123
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
C +IH D+ +N L+ EN+ K
Sbjct: 124 C---VIHRDLAARNCLVGENQVIK 144
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 18/144 (12%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +++G G G V+ G +N+ VA+ + E + E + F E +V+ + H LV+L
Sbjct: 11 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLY 68
Query: 91 GYSLEVSKKILVYEYMSNGSLADI------LFNAEKQPNWIERTGIARDIARGILYLHDE 144
G LE + LV+E+M +G L+D LF AE G+ D+ G+ YL
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAET------LLGMCLDVCEGMAYLE-- 120
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
E +IH D+ +N L+ EN+ K
Sbjct: 121 -EASVIHRDLAARNCLVGENQVIK 143
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR-THHRNLVRLLGY 92
E VG G+ G VYKG + +A ++ V + E E + EI ++ + +HHRN+ G
Sbjct: 30 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGA 89
Query: 93 SLEVSKK------ILVYEYMSNGSLADILFNAEK---QPNWIERTGIARDIARGILYLHD 143
++ + LV E+ GS+ D++ N + + WI I R+I RG+ +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILRGLSHLH- 146
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ ++IH DIK QN+L+ EN
Sbjct: 147 --QHKVIHRDIKGQNVLLTEN 165
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
YL D +H D+ +NIL++ N K +G+V E
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L +E + + IAR ARG+ YLH
Sbjct: 80 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVK 160
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 67
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L +E + + IAR ARG+ YLH
Sbjct: 68 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 127 KS---IIHRDLKSNNIFLHEDNTVK 148
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 79
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + +V ++ SL L +E + + IAR ARG+ YLH
Sbjct: 80 VNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 139 KS---IIHRDLKSNNIFLHEDNTVK 160
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 33 KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
+E +G G G V +G + VA+ L+ ER+R EF +E ++G+ H N++
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
RL G +++ E+M NG+L L + Q I+ G+ R IA G+ YL E
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 137
Query: 148 QIIHCDIKPQNILMDENRCAK 168
+H D+ +NIL++ N K
Sbjct: 138 SYVHRDLAARNILVNSNLVCK 158
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 33 KEKVGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
+E +G G G V +G + VA+ L+ ER+R EF +E ++G+ H N++
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
RL G +++ E+M NG+L L + Q I+ G+ R IA G+ YL E
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 135
Query: 148 QIIHCDIKPQNILMDENRCAK 168
+H D+ +NIL++ N K
Sbjct: 136 SYVHRDLAARNILVNSNLVCK 156
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
+IT G +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H N+
Sbjct: 9 QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH +
Sbjct: 67 LLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
IIH D+K NI + E+ K
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVK 144
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 69 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVK 149
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 9 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 68
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 69 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 128 KS---IIHRDLKSNNIFLHEDLTVK 149
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 34 EKVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
E +G+G G K + +R+ ++ + L + +E +R F E+KV+ H N+++ +
Sbjct: 16 EVLGKGCFGQAIK--VTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFI 73
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G + + + EY+ G+L I+ + + Q W +R A+DIA G+ YLH II
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNII 130
Query: 151 HCDIKPQNILMDENR 165
H D+ N L+ EN+
Sbjct: 131 HRDLNSHNCLVRENK 145
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
+IT G +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H N+
Sbjct: 11 QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 68
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH +
Sbjct: 69 LLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
IIH D+K NI + E+ K
Sbjct: 127 --IIHRDLKSNNIFLHEDLTVK 146
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 63
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 64 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 123 KS---IIHRDLKSNNIFLHEDLTVK 144
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 27 KITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
+IT G +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H N+
Sbjct: 9 QITVG--QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI 66
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+ +GYS + +V ++ SL L E + I+ IAR A+G+ YLH +
Sbjct: 67 LLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
IIH D+K NI + E+ K
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVK 144
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36 VGRGSSGTVYKGAM-INRQ---LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
+G G SG V G + + Q VA+ L+ ER+R +F +E ++G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G ++V EYM NGSL L + Q ++ G+ R + G+ YL D +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYV 173
Query: 151 HCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
H D+ +N+L+D N K + +V E D
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 36 VGRGSSGTVYKGAM-INRQ---LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
+G G SG V G + + Q VA+ L+ ER+R +F +E ++G+ H N++RL
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G ++V EYM NGSL L + Q ++ G+ R + G+ YL D +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYV 173
Query: 151 HCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
H D+ +N+L+D N K + +V E D
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD 206
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20 FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
F + L + D +++++G+G G V+KG ++ ++ +VA+ L E + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69 REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
+EFQ E+ ++ +H N+V+L Y L + +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
+ DIA GI Y+ ++ I+H D++ NI +DEN CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 83
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 84 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 143 KS---IIHRDLKSNNIFLHEDLTVK 164
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20 FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
F + L + D +++++G+G G V+KG ++ ++ +VA+ L E + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69 REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
+EFQ E+ ++ +H N+V+L Y L + +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
+ DIA GI Y+ ++ I+H D++ NI +DEN CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 92 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVK 172
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 90
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 91 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 150 KS---IIHRDLKSNNIFLHEDLTVK 171
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 85/165 (51%), Gaps = 19/165 (11%)
Query: 20 FSYAELKKITDG---FKEKVGRGSSGTVYKGAMI-NRQLVAVNRL-------EKVLDERE 68
F + L + D +++++G+G G V+KG ++ ++ +VA+ L E + E+
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 69 REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
+EFQ E+ ++ +H N+V+L Y L + +V E++ G L L + W +
Sbjct: 68 QEFQREVFIMSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNIL---MDENR--CAK 168
+ DIA GI Y+ ++ I+H D++ NI +DEN CAK
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAK 169
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 7/145 (4%)
Query: 27 KITDG---FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+I DG +++G GS GTVYKG V + + ++ + F+ E+ V+ +T H
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
N++ +GYS + I V ++ SL L E + I+ IAR A+G+ YLH
Sbjct: 92 VNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
+ IIH D+K NI + E+ K
Sbjct: 151 KS---IIHRDLKSNNIFLHEDLTVK 172
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGFVHRDLAARNILINSNLVCK 187
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 175 ---ENHFIHRDIAARNCLL 190
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 158 ---ENHFIHRDIAARNCLL 173
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 176 ---ENHFIHRDIAARNCLL 191
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ-----LVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRL 89
+G G G VYKG + VA+ L+ E++R +F E ++G+ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
G + +++ EYM NG+L L + + + ++ G+ R IA G+ YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNY 168
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D+ +NIL++ N K
Sbjct: 169 VHRDLAARNILVNSNLVCK 187
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 165 ---ENHFIHRDIAARNCLL 180
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 199 ---ENHFIHRDIAARNCLL 214
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 150 ---ENHFIHRDIAARNCLL 165
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 158 ---ENHFIHRDIAARNCLL 173
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 159 ---ENHFIHRDIAARNCLL 174
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCK 158
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 185 ---ENHFIHRDIAARNCLL 200
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 149 KYLSD---MGYVHRDLAARNILINSNLVCK 175
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V EYM NGSL L + Q I+ G+ R IA G+
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 158
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 159 KYLSD---MGYVHRDLAARNILINSNLVCK 185
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRLEKVLDER-EREFQTEIKVIGRTHHRNLVR 88
+G G+ G VY+G M N VAV L +V E+ E +F E +I + +H+N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN------WIERTGIARDIARGILYLH 142
+G SL+ + ++ E M+ G L L +P+ ++ +ARDIA G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 143 DECETQIIHCDIKPQNILM 161
E IH DI +N L+
Sbjct: 173 ---ENHFIHRDIAARNCLL 188
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 8/141 (5%)
Query: 33 KEKVGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
++ +G G G V G + R++ VA+ L+ E++R +F +E ++G+ H N++
Sbjct: 38 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 97
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
L G + + +++ E+M NGSL L + Q I+ G+ R IA G+ YL D
Sbjct: 98 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---M 154
Query: 148 QIIHCDIKPQNILMDENRCAK 168
+H D+ +NIL++ N K
Sbjct: 155 NYVHRDLAARNILVNSNLVCK 175
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 4/147 (2%)
Query: 22 YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT 81
Y E++ ++G GS GTVYKG V + ++ E+ + F+ E+ V+ +T
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKT 89
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H N++ +GY + + I V ++ SL L E + + IAR A+G+ YL
Sbjct: 90 RHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL 148
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H + IIH D+K NI + E K
Sbjct: 149 HAK---NIIHRDMKSNNIFLHEGLTVK 172
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 17/170 (10%)
Query: 13 TLTTPFSF-----SYAELKKITDG----FKEKVGRGSSGTVYKGAMI---NRQL-VAVNR 59
T PF+F + E K D ++ +G G G V G + R++ VA+
Sbjct: 5 TFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKT 64
Query: 60 LEK-VLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNA 118
L+ D++ R+F +E ++G+ H N++ L G + +++ EYM NGSL L
Sbjct: 65 LKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKN 124
Query: 119 EKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ + I+ G+ R I G+ YL D +H D+ +NIL++ N K
Sbjct: 125 DGRFTVIQLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCK 171
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 52 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 111
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 112 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 168
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 169 SKKFVHRDLAARNCMLDEKFTVK 191
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 88
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 89 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVK 168
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVK 171
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 26 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 85
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL +
Sbjct: 86 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK- 144
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVK 165
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.2 bits (147), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 53 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 112
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 113 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 169
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 170 SKKFVHRDLAARNCMLDEKFTVK 192
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 31 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 90
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 91 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 147
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVK 170
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVK 172
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 33 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 92
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 93 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 149
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVK 172
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ YL
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 21/140 (15%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNLV 87
+++G+GS G VYKG +++VA+ K++D + + Q EI V+ + +
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDE 144
R G L+ +K ++ EY+ GS D+L +P +E T IA R+I +G+ YLH E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLHSE 135
Query: 145 CETQIIHCDIKPQNILMDEN 164
+ IH DIK N+L+ E
Sbjct: 136 RK---IHRDIKAANVLLSEQ 152
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V E M NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGAVHRDLAARNILINSNLVCK 187
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V E M NGSL L + Q I+ G+ R IA G+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 131
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 132 KYLSD---MGYVHRDLAARNILINSNLVCK 158
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 8/150 (5%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAM---INRQL-VAVNRLEKVLDERER-EFQTEIKVI 78
EL + VG G G V G + +++ VA+ L+ E++R +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 79 GRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
G+ H N++RL G + ++V E M NGSL L + Q I+ G+ R IA G+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
YL D +H D+ +NIL++ N K
Sbjct: 161 KYLSD---MGYVHRDLAARNILINSNLVCK 187
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 39 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 98
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 99 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 155
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVK 178
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 34 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 93
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 94 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 150
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVK 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36 VGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
+G G G V G + R+L VA+ L+ E++R +F E ++G+ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G + ++V EYM NGSL L + Q I+ G+ R I+ G+ YL D +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSD---MGYV 146
Query: 151 HCDIKPQNILMDENRCAK 168
H D+ +NIL++ N K
Sbjct: 147 HRDLAARNILINSNLVCK 164
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVK 174
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 152
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 153 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 209
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVK 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 35 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 94
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 95 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 151
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVK 174
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 59.7 bits (143), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 9/143 (6%)
Query: 32 FKEKVGRGSSGTVYKGAMIN----RQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNL 86
F E +GRG G VY G +++ + AV L ++ D E +F TE ++ H N+
Sbjct: 32 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNV 91
Query: 87 VRLLGYSLEV-SKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ LLG L ++V YM +G L + + N P + G +A+G+ +L
Sbjct: 92 LSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---A 148
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
+ +H D+ +N ++DE K
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVK 171
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
K ++G G+ G V+ N + LVAV L+ D ++F E +++ H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP----NWIERTGIARD 133
+V+ G +E I+V+EYM +G L D + AE P + IA+
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
IA G++YL + +H D+ +N L+ EN K
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36 VGRGSSGTVYKGAMI---NRQL-VAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLL 90
+G G G V G + R++ VA+ L+ D++ R+F +E ++G+ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G + +++ EYM NGSL L + + I+ G+ R I G+ YL D +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 132
Query: 151 HCDIKPQNILMDENRCAK 168
H D+ +NIL++ N K
Sbjct: 133 HRDLAARNILVNSNLVCK 150
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 8/138 (5%)
Query: 36 VGRGSSGTVYKGAMI---NRQL-VAVNRLEK-VLDEREREFQTEIKVIGRTHHRNLVRLL 90
+G G G V G + R++ VA+ L+ D++ R+F +E ++G+ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G + +++ EYM NGSL L + + I+ G+ R I G+ YL D +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSD---MSYV 138
Query: 151 HCDIKPQNILMDENRCAK 168
H D+ +NIL++ N K
Sbjct: 139 HRDLAARNILVNSNLVCK 156
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 33 KEKVGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLV 87
++ +G G G V G + R++ VA+ L+ E++R +F +E ++G+ H N++
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
L G + + +++ E+M NGSL L + Q I+ G+ R IA G+ YL D
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD---M 128
Query: 148 QIIHCDIKPQNILMDENRCAK 168
+H + +NIL++ N K
Sbjct: 129 NYVHRALAARNILVNSNLVCK 149
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
EK+G+GS G V+KG + NR ++VA+ K++D + + Q EI V+ + +
Sbjct: 13 EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
+ G L+ +K ++ EY+ GS D+L +P ++ T IA R+I +G+ YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 144 ECETQIIHCDIKPQNILMDEN 164
E + IH DIK N+L+ E+
Sbjct: 123 E---KKIHRDIKAANVLLSEH 140
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
EK+G+GS G V+KG + NR ++VA+ K++D + + Q EI V+ + +
Sbjct: 13 EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
+ G L+ +K ++ EY+ GS D+L +P ++ T IA R+I +G+ YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 122
Query: 144 ECETQIIHCDIKPQNILMDEN 164
E + IH DIK N+L+ E+
Sbjct: 123 E---KKIHRDIKAANVLLSEH 140
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
EK+G+GS G V+KG + NR ++VA+ K++D + + Q EI V+ + +
Sbjct: 28 EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
+ G L+ +K ++ EY+ GS D+L +P ++ T IA R+I +G+ YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 137
Query: 144 ECETQIIHCDIKPQNILMDEN 164
E + IH DIK N+L+ E+
Sbjct: 138 EKK---IHRDIKAANVLLSEH 155
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%), Gaps = 23/141 (16%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
EK+G+GS G V+KG + NR ++VA+ K++D + + Q EI V+ + +
Sbjct: 33 EKIGKGSFGEVFKG-IDNRTQKVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
+ G L+ +K ++ EY+ GS D+L +P ++ T IA R+I +G+ YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLHS 142
Query: 144 ECETQIIHCDIKPQNILMDEN 164
E + IH DIK N+L+ E+
Sbjct: 143 E---KKIHRDIKAANVLLSEH 160
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 65/148 (43%), Gaps = 20/148 (13%)
Query: 22 YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE----FQTEIKV 77
+AEL +E +G G G VY+ I + VAV DE + + E K+
Sbjct: 6 FAELT-----LEEIIGIGGFGKVYRAFWIGDE-VAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP----NWIERTGIARD 133
H N++ L G L+ LV E+ G L +L P NW A
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQ 113
Query: 134 IARGILYLHDECETQIIHCDIKPQNILM 161
IARG+ YLHDE IIH D+K NIL+
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILI 141
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 73 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Query: 36 VGRGSSGTVYKGAMI---NRQL-VAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLL 90
+G G G V G + R + VA+ L+ E++R +F E ++G+ H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G ++V E+M NG+L L + Q I+ G+ R IA G+ YL D +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLAD---MGYV 167
Query: 151 HCDIKPQNILMDENRCAK 168
H D+ +NIL++ N K
Sbjct: 168 HRDLAARNILVNSNLVCK 185
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 13 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 71
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 131
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 132 EKK---NFIHRDLAARNCLVGENHLVK 155
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 22 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 80
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 81 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 140
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 141 EKK---NFIHRDLAARNCLVGENHLVK 164
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 69 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVK 152
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 10 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 68
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 69 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 129 EKK---NFIHRDLAARNCLVGENHLVK 152
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 11 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 69
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q N + +A I+ + YL
Sbjct: 70 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 129
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 130 EKK---NFIHRDLAARNCLVGENHLVK 153
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
F++ +G G+ G V K + R A+ R+ E + R+F E++V+ + HH N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
+ LLG L EY +G+L D L + E P + + A
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 138
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
D+ARG+ YL + Q IH D+ +NIL+ EN AK
Sbjct: 139 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 172
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
F++ +G G+ G V K + R A+ R+ E + R+F E++V+ + HH N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
+ LLG L EY +G+L D L + E P + + A
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 148
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
D+ARG+ YL + Q IH D+ +NIL+ EN AK
Sbjct: 149 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAK 182
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 2 PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRL 60
P Y + NY E+++ K K+G G G VY+G L VAV L
Sbjct: 242 PTVYGVSPNYDKW---------EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 292
Query: 61 EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
++ E E EF E V+ H NLV+LLG ++ E+M+ G+L D L +
Sbjct: 293 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 351
Query: 121 QP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
Q N + +A I+ + YL + IH ++ +N L+ EN K
Sbjct: 352 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 397
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 2 PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRL 60
P Y + NY E+++ K K+G G G VY+G L VAV L
Sbjct: 200 PTVYGVSPNYDKW---------EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 250
Query: 61 EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
++ E E EF E V+ H NLV+LLG ++ E+M+ G+L D L +
Sbjct: 251 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 309
Query: 121 QP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
Q N + +A I+ + YL + IH ++ +N L+ EN K
Sbjct: 310 QEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 355
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 15 TTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERER 69
+ P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R
Sbjct: 2 SDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 70 EFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER 127
+F+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 16/159 (10%)
Query: 15 TTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERER 69
+ P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R
Sbjct: 2 SDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR 56
Query: 70 EFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER 127
+F+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 128 TGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 117 LQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 3 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 117
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 118 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 151
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 2 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 116
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 117 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 150
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 10 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 124
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 125 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 158
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 9 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 123
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 124 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 157
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 35 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 150 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 183
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 82/160 (51%), Gaps = 16/160 (10%)
Query: 14 LTTPFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDERE 68
+ P F LK F +++G+G+ G+V Y N ++VAV +L+ +E
Sbjct: 1 MRDPTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHL 55
Query: 69 REFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE 126
R+F+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 56 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIK 115
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 116 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 11 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 125
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 126 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 159
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 8 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 122
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 123 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 156
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 66 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 14 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 72
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 73 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 133 EKK---NFIHRDLAARNCLVGENHLVK 156
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 67
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 68 HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 127
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 128 EKK---NFIHRDLAARNCLVGENHLVK 151
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 32 FKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
F +++G+G+ G+V Y N ++VAV +L+ +E R+F+ EI+++ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 87 VRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
V+ G YS L+ EY+ GSL D L +++ + I+ I +G+ YL +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 145 CETQIIHCDIKPQNILMD-ENR 165
+ IH D+ +NIL++ ENR
Sbjct: 152 ---RYIHRDLATRNILVENENR 170
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
EK+G+G+SGTVY + Q VA+ ++ ++ EI V+ + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + +V EY++ GSL D++ I + R+ + + +LH Q+IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
DIK NIL+
Sbjct: 141 DIKSDNILL 149
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
EK+G+G+SGTVY + Q VA+ ++ ++ EI V+ + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + +V EY++ GSL D++ I + R+ + + +LH Q+IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
DIK NIL+
Sbjct: 141 DIKSDNILL 149
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 32 FKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNL 86
F +++G+G+ G+V Y N ++VAV +L+ +E R+F+ EI+++ H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 87 VRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
V+ G YS L+ EY+ GSL D L +++ + I+ I +G+ YL +
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 145 CETQIIHCDIKPQNILMD-ENR 165
+ IH D+ +NIL++ ENR
Sbjct: 152 ---RYIHRDLATRNILVENENR 170
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
EK+G+G+SGTVY + Q VA+ ++ ++ EI V+ + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + +V EY++ GSL D++ I + R+ + + +LH Q+IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 141
Query: 153 DIKPQNILM 161
DIK NIL+
Sbjct: 142 DIKSDNILL 150
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
EK+G+G+SGTVY + Q VA+ ++ ++ EI V+ + N+V L
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + +V EY++ GSL D++ I + R+ + + +LH Q+IH
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 140
Query: 153 DIKPQNILM 161
DIK NIL+
Sbjct: 141 DIKSDNILL 149
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY+G L VAV L++ E E EF E V+
Sbjct: 7 EMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 65
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYL 141
H NLV+LLG ++ E+M+ G+L D L +Q + + +A I+ + YL
Sbjct: 66 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
+ IH D+ +N L+ EN K
Sbjct: 126 EKK---NFIHRDLAARNCLVGENHLVK 149
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L ++ + I+
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 34 EKVGRGSSGTVY--KGAMINRQLVAVNRLEKVLDERERE-----FQTEIKVIGRTHHRNL 86
+K+G G TVY + ++N + VA+ + + RE+E F+ E+ + H+N+
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIK-VAIKAI--FIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDEC 145
V ++ E LV EY+ +L++ + P ++ I GI + HD
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSE--YIESHGPLSVDTAINFTNQILDGIKHAHD-- 129
Query: 146 ETQIIHCDIKPQNILMDENRCAKNFRLWIGK 176
+I+H DIKPQNIL+D N+ K F I K
Sbjct: 130 -MRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
P+ E+ + T E++G G +G V+ G VAV L K F E
Sbjct: 2 PWWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEAN 60
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GI 130
++ + H+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +
Sbjct: 61 LMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDM 114
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A IA G+ ++ E IH D++ NIL+ + K
Sbjct: 115 AAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCK 149
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 2 PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRL 60
P Y + NY E+++ K K+G G G VY+G L VAV L
Sbjct: 203 PTIYGVSPNYDKW---------EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 253
Query: 61 EKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEK 120
++ E E EF E V+ H NLV+LLG ++ E+M+ G+L D L +
Sbjct: 254 KEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 312
Query: 121 QP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
Q + + +A I+ + YL + IH ++ +N L+ EN K
Sbjct: 313 QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVK 358
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 14/151 (9%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTH 82
E+++ K K+G G G VY G L VAV L++ E E EF E V+
Sbjct: 28 EMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIK 86
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI-----ARDIARG 137
H NLV+LLG +V EYM G+L D L ++ E T + A I+
Sbjct: 87 HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNRE----EVTAVVLLYMATQISSA 142
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ YL + IH D+ +N L+ EN K
Sbjct: 143 MEYLEKK---NFIHRDLAARNCLVGENHVVK 170
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN---RQLVAVNRL-EKVLDEREREFQTEIKVIGRT-HHRNL 86
F++ +G G+ G V K + R A+ R+ E + R+F E++V+ + HH N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNA---EKQPNWI------------ERTGIA 131
+ LLG L EY +G+L D L + E P + + A
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 145
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
D+ARG+ YL + Q IH ++ +NIL+ EN AK
Sbjct: 146 ADVARGMDYLS---QKQFIHRNLAARNILVGENYVAK 179
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 17/138 (12%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLD-----EREREFQTEIKVIGRTHHRNL 86
E++G+GS G V+KG + NR Q+VA+ K++D + + Q EI V+ + +
Sbjct: 29 ERIGKGSFGEVFKG-IDNRTQQVVAI----KIIDLEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+ G L+ SK ++ EY+ GS D+L + + + ++I +G+ YLH E +
Sbjct: 84 TKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLHSEKK 141
Query: 147 TQIIHCDIKPQNILMDEN 164
IH DIK N+L+ E
Sbjct: 142 ---IHRDIKAANVLLSEQ 156
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F +++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 5 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ EY+ GSL D L +++ + I+
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 119
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH ++ +NIL++ ENR
Sbjct: 120 YTSQICKGMEYLGTK---RYIHRNLATRNILVENENR 153
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 6/129 (4%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
EK+G+G+SGTVY + Q VA+ ++ ++ EI V+ + N+V L
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + +V EY++ GSL D++ I + R+ + + +LH Q+IH
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLHS---NQVIHR 141
Query: 153 DIKPQNILM 161
+IK NIL+
Sbjct: 142 NIKSDNILL 150
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 76
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 77 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 130
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 131 MAFIE---ERNYIHRDLRAANILVSDTLSCK 158
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 62
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 63 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 116
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 117 MAFIE---ERNYIHRDLRAANILVSDTLSCK 144
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 67
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 72
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 73 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 126
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 127 MAFIE---ERNYIHRDLRAANILVSDTLSCK 154
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 67
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 74 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 127
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 128 MAFIE---ERNYIHRDLRAANILVSDTLSCK 155
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 67
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 68 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 121
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 122 MAFIE---ERNYIHRDLRAANILVSDTLSCK 149
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 75
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 76 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 129
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 130 MAFIE---ERNYIHRDLRAANILVSDTLSCK 157
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 69
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 70 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 123
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 124 MAFIE---ERNYIHRDLRAANILVSDTLSCK 151
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 68
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 69 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 122
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 123 MAFIE---ERNYIHRDLRAANILVSDTLSCK 150
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 73
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 74 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 127
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 128 MAFIE---ERNYIHRDLRAANILVSDTLSCK 155
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L K F E ++ + H
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL-KQGSMSPDAFLAEANLMKQLQH 77
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 78 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 131
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH D++ NIL+ + K
Sbjct: 132 MAFIE---ERNYIHRDLRAANILVSDTLSCK 159
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 35 KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
++G GS G VY + N ++VA+ ++ K +E+ ++ E++ + + H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G L LV EY GS +D+L +K +E + +G+ YLH +I
Sbjct: 82 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 137
Query: 151 HCDIKPQNILMDENRCAK 168
H D+K NIL+ E K
Sbjct: 138 HRDVKAGNILLSEPGLVK 155
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 35 KVGRGSSGTVYKGAMI-NRQLVAVNRLE---KVLDEREREFQTEIKVIGRTHHRNLVRLL 90
++G GS G VY + N ++VA+ ++ K +E+ ++ E++ + + H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G L LV EY GS +D+L +K +E + +G+ YLH +I
Sbjct: 121 GCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMI 176
Query: 151 HCDIKPQNILMDENRCAK 168
H D+K NIL+ E K
Sbjct: 177 HRDVKAGNILLSEPGLVK 194
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 37 GRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY---- 92
RG G V+K ++N + VAV ++ + D++ + + E+ + H N+++ +G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAV-KIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 93 -SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC------ 145
S++V L+ + GSL+D L +W E IA +ARG+ YLH++
Sbjct: 91 TSVDVDL-WLITAFHEKGSLSDFL--KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 146 -ETQIIHCDIKPQNILMDEN--RCAKNFRL 172
+ I H DIK +N+L+ N C +F L
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGL 177
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 24/158 (15%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
K ++G G+ G V+ N + LVAV L+ ++FQ E +++ H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSL--------ADILFNAEKQP-------NWIERTGI 130
+V+ G + I+V+EYM +G L D + + QP + I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A IA G++YL + +H D+ +N L+ N K
Sbjct: 139 ASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVK 173
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 5/140 (3%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
E +G G G V+K L ++ K +++E + EI V+ + H NL++L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ +LV EY+ G L D + + ++ + I GI ++H + I+H
Sbjct: 155 FESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHL 211
Query: 153 DIKPQNILMDENRCAKNFRL 172
D+KP+NIL NR AK ++
Sbjct: 212 DLKPENILC-VNRDAKQIKI 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 16/157 (10%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK F ++G+G+ G+V Y N ++VAV +L+ +E R+F
Sbjct: 7 PTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 72 QTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG 129
+ EI+++ H N+V+ G YS L+ E++ GSL + L +++ + I+
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ 121
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD-ENR 165
I +G+ YL + + IH D+ +NIL++ ENR
Sbjct: 122 YTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
K ++G G+ G V+ N + LVAV L++ + ++FQ E +++ H++
Sbjct: 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
+VR G E ++V+EYM +G L A +L E P + + +A
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+A G++YL +H D+ +N L+ + K
Sbjct: 165 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 198
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
K ++G G+ G V+ N + LVAV L++ + ++FQ E +++ H++
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
+VR G E ++V+EYM +G L A +L E P + + +A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+A G++YL +H D+ +N L+ + K
Sbjct: 142 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 175
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
K ++G G+ G V+ N + LVAV L++ + ++FQ E +++ H++
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSL----------ADILFNAEK-QPNWI---ERTGIA 131
+VR G E ++V+EYM +G L A +L E P + + +A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+A G++YL +H D+ +N L+ + K
Sbjct: 136 SQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVK 169
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 22 YAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT 81
+ ELK+ +++G G G V G + VAV ++ K E EF E + + +
Sbjct: 2 HMELKREEITLLKELGSGQFGVVKLGKWKGQYDVAV-KMIKEGSMSEDEFFQEAQTMMKL 60
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H LV+ G + +V EY+SNG L + L + K + + D+ G+ +L
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
Q IH D+ +N L+D + C K
Sbjct: 121 ESH---QFIHRDLAARNCLVDRDLCVK 144
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 36 VGRGSSGTVYKGAMI----NRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G+G G VY G I NR A+ L ++ + ++ E F E ++ +H N++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 91 GYSL--EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
G L E +L+ YM +G L + + ++ P + +ARG+ YL E +
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQK 144
Query: 149 IIHCDIKPQNILMDENRCAK 168
+H D+ +N ++DE+ K
Sbjct: 145 FVHRDLAARNCMLDESFTVK 164
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRT---HHRNLVRLL 90
E +GRG G VYKG++ R VAV KV R+ K I R H N+ R +
Sbjct: 19 ELIGRGRYGAVYKGSLDERP-VAV----KVFSFANRQNFINEKNIYRVPLMEHDNIARFI 73
Query: 91 GYSLEVSKK-----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH--- 142
V+ +LV EY NGSL L + +W+ +A + RG+ YLH
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTEL 131
Query: 143 ---DECETQIIHCDIKPQNILM 161
D + I H D+ +N+L+
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLV 153
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 14/150 (9%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L K + F E +V+ + H LV+L Y++
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQL--YAV 248
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 302
Query: 150 IHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
+H D++ NIL+ EN K +G++ E
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIE 332
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 16/151 (10%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
E+ + T E++G G G V+ G VAV L++ F E ++ + H
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQH 63
Query: 84 RNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERT-----GIARDIARG 137
+ LVRL Y++ + I ++ EYM NGSL D L K P+ I+ T +A IA G
Sbjct: 64 QRLVRL--YAVVTQEPIYIITEYMENGSLVDFL----KTPSGIKLTINKLLDMAAQIAEG 117
Query: 138 ILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ ++ E IH +++ NIL+ + K
Sbjct: 118 MAFIE---ERNYIHRNLRAANILVSDTLSCK 145
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEK-VLDEREREFQT---EIKVIGRTHHRNLVRL 89
E++G G+ G V++ + + N K V+ E + +T EI+ + H LV L
Sbjct: 163 EELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
+ ++ +++YE+MS G L + + + + + E R + +G+ ++H E
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNY 276
Query: 150 IHCDIKPQNILMDENRC 166
+H D+KP+NI+ R
Sbjct: 277 VHLDLKPENIMFTTKRS 293
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 330
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 384
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 385 VHRDLRAANILVGENLVCK 403
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEK-VLDEREREFQT---EIKVIGRTHHRNLVRL 89
E++G G+ G V++ + + N K V+ E + +T EI+ + H LV L
Sbjct: 57 EELGTGAFGVVHR---VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
+ ++ +++YE+MS G L + + + + + E R + +G+ ++H E
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNY 170
Query: 150 IHCDIKPQNILMDENRC 166
+H D+KP+NI+ R
Sbjct: 171 VHLDLKPENIMFTTKRS 187
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY R+ + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 124
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 125 -RVIHRDIKPENLLL 138
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 302 VHRDLRAANILVGENLVCK 320
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 302 VHRDLRAANILVGENLVCK 320
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 71
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 125
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 126 VHRDLRAANILVGENLVCK 144
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 74
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 128
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 129 VHRDLRAANILVGENLVCK 147
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLG 91
E++GRG+ G V+ G + + LVAV + L + + +F E +++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +V E + G L + + D A G+ YL +C IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+ E K
Sbjct: 237 RDLAARNCLVTEKNVLK 253
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDER-----EREFQTEIKVIGRTHHRNLVRL 89
+G G+ GTVYKG + + V + K+L+E EF E ++ H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 90 LGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGILYLHD 143
LG L + + LV + M +G L + + ++ NW + IA+G++YL
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE- 134
Query: 144 ECETQIIHCDIKPQNILM 161
E +++H D+ +N+L+
Sbjct: 135 --ERRLVHRDLAARNVLV 150
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLD-EREREFQTEIKVIGRTHHRNLVRLLG 91
E++GRG+ G V+ G + + LVAV + L + + +F E +++ + H N+VRL+G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +V E + G L + + D A G+ YL +C IH
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIH 236
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+ E K
Sbjct: 237 RDLAARNCLVTEKNVLK 253
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERER-----EFQTEIKVIGRTHHRNLVRL 89
+G G+ GTVYKG + + V + K+L+E EF E ++ H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 90 LGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIARDIARGILYLHD 143
LG L + + LV + M +G L + + ++ NW + IA+G++YL
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLE- 157
Query: 144 ECETQIIHCDIKPQNILM 161
E +++H D+ +N+L+
Sbjct: 158 --ERRLVHRDLAARNVLV 173
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 247
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 301
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 302 VHRDLRAANILVGENLVCK 320
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY ++ ++A+ L K E+ E + + E+++ H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILMDEN 164
++IH DIKP+N+L+ N
Sbjct: 132 -RVIHRDIKPENLLLGSN 148
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY N + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -KVIHRDIKPENLLL 141
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 72
Query: 95 EVSKKI-LVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ I +V EYMS GSL D L K + +A IA G+ Y+ +H
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 129
Query: 153 DIKPQNILMDENRCAK 168
D++ NIL+ EN K
Sbjct: 130 DLRAANILVGENLVCK 145
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 70
Query: 95 EVSKKI-LVYEYMSNGSLADIL-FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ I +V EYMS GSL D L K + +A IA G+ Y+ +H
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHR 127
Query: 153 DIKPQNILMDENRCAK 168
D++ NIL+ EN K
Sbjct: 128 DLRAANILVGENLVCK 143
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 70/138 (50%), Gaps = 18/138 (13%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY ++ ++A+ L K E+ E + + E+++ H N++RL G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILMDEN 164
++IH DIKP+N+L+ N
Sbjct: 132 -RVIHRDIKPENLLLGSN 148
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVRLLGY 92
EK+G GS G+VYK I+++ + +++V E + +E EI ++ + ++V+ G
Sbjct: 35 EKLGEGSYGSVYKA--IHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGS 92
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ + +V EY GS++DI+ K E I + +G+ YLH + IH
Sbjct: 93 YFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHR 149
Query: 153 DIKPQNILMDENRCAK 168
DIK NIL++ AK
Sbjct: 150 DIKAGNILLNTEGHAK 165
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT----EIKVIGRTHHRNLVRL 89
EKVG G+ G VYK ++VA+ R+ LD + + EI ++ HH N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
+ LV+E+M L +L ++ ++ + I + RG+ + H +
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
+I+H D+KPQN+L++ + K
Sbjct: 138 HRILHRDLKPQNLLINSDGALK 159
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 16/142 (11%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT----EIKVIGRTHHRNLVRL 89
EKVG G+ G VYK ++VA+ R+ LD + + EI ++ HH N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIR--LDAEDEGIPSTAIREISLLKELHHPNIVSL 84
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHDECE 146
+ LV+E+M L +L ++ ++ + I + RG+ + H +
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCH---Q 137
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
+I+H D+KPQN+L++ + K
Sbjct: 138 HRILHRDLKPQNLLINSDGALK 159
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G+G+ G V K ++ + A+ ++ +E+ +E+ ++ +H+ +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95 E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
E V KK ++ EY NG+L D++ + E + R I + Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H + IIH D+KP NI +DE+R K
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVK 156
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 29/146 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT---EIKVIGRTHHRNLVRL 89
EK+G G+ TVYKG +N+ L++V LD E T EI ++ H N+VRL
Sbjct: 11 EKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRL 68
Query: 90 LGYSLEVSKKILVYEYMSN------------GSLADILFNAEKQPNWIERTGIARDIARG 137
+K LV+E+M N + + N K W + +G
Sbjct: 69 YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQW--------QLLQG 120
Query: 138 ILYLHDECETQIIHCDIKPQNILMDE 163
+ + H E +I+H D+KPQN+L+++
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINK 143
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%), Gaps = 13/139 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDER--EREFQTEIKVIGRTHHRNLVRLLGY 92
VG GS G V K + ++VA+ + + D++ ++ EIK++ + H NLV LL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR---DIARGILYLHDECETQI 149
+ + LV+E++ + L D+ E PN ++ + + I GI + H I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDL----ELFPNGLDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 150 IHCDIKPQNILMDENRCAK 168
IH DIKP+NIL+ ++ K
Sbjct: 146 IHRDIKPENILVSQSGVVK 164
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G+G+ G VY G ++ Q+ +A+ + + + EI + H+N+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GI-ARDIARGILYLHDECETQIIHC 152
E + E + GSL+ +L + E+T G + I G+ YLHD QI+H
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHR 146
Query: 153 DIKPQNILMD 162
DIK N+L++
Sbjct: 147 DIKGDNVLIN 156
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G + L F+ ++ +I ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G + L F+ ++ +I ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS GSL D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D+ NIL+ EN K
Sbjct: 136 VHRDLAAANILVGENLVCK 154
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G+G+ G VY G ++ Q+ +A+ + + + EI + H+N+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERT-GI-ARDIARGILYLHDECETQIIHC 152
E + E + GSL+ +L + E+T G + I G+ YLHD QI+H
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHR 132
Query: 153 DIKPQNILMD 162
DIK N+L++
Sbjct: 133 DIKGDNVLIN 142
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERER-EFQTEIKVIGRTHHRNLVRLLGY 92
E++G G+ G V++ V V + ++ + EI ++ + HH L+ L
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDA 116
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ + +L+ E++S G L D + + + + E R G+ ++H E I+H
Sbjct: 117 FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHL 173
Query: 153 DIKPQNILMDENRCA 167
DIKP+NI+ + + +
Sbjct: 174 DIKPENIMCETKKAS 188
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
EK+G G+ G VYK + A+ RLEK + EI ++ H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +LV+E++ L +L E + + GI Y HD +++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
EK+G G+ G VYK + A+ RLEK + EI ++ H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +LV+E++ L +L E + + GI Y HD +++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
EK+G G+ G VYK + A+ RLEK + EI ++ H N+V+L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +LV+E++ L +L E + + GI Y HD +++H
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLH 123
Query: 152 CDIKPQNILMD 162
D+KPQN+L++
Sbjct: 124 RDLKPQNLLIN 134
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 8 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 123
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 124 RDLAARNCLVNDQGVVK 140
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 129
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 130 -RVIHRDIKPENLLL 143
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 128
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 129 -RVIHRDIKPENLLL 142
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 129
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 130 -RVIHRDIKPENLLL 143
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 144 RDLAARNCLVNDQGVVK 160
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS G L D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 133 -RVIHRDIKPENLLL 146
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 28 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 143
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 144 RDLAARNCLVNDQGVVK 160
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 129 RDLAARNCLVNDQGVVK 145
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 153
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 154 -RVIHRDIKPENLLL 167
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 144
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 145 -RVIHRDIKPENLLL 158
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 12 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 127
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 128 RDLAARNCLVNDQGVVK 144
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 126
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 127 -RVIHRDIKPENLLL 140
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 131
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 132 -RVIHRDIKPENLLL 145
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 19 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 134
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 135 RDLAARNCLVNDQGVVK 151
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
F +++G G G V G + VA+ ++ K E EF E KV+ H LV+L G
Sbjct: 13 FLKELGTGQFGVVKYGKWRGQYDVAI-KMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ ++ EYM+NG L + L + + + +D+ + YL + Q +H
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLH 128
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N L+++ K
Sbjct: 129 RDLAARNCLVNDQGVVK 145
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 35 KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
++G G+ G VYK N++ L A +E +E ++ EI+++ H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
K ++ E+ G++ I+ ++ + + R + + +LH + +IIH
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 132
Query: 152 CDIKPQNILM 161
D+K N+LM
Sbjct: 133 RDLKAGNVLM 142
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 153
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 154 -RVIHRDIKPENLLL 167
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+++G G G V+ G VA+ L+ E F E +++ + H LV+L Y+
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YA 71
Query: 94 LEVSKKI-LVYEYMSNGSLADILFNAE----KQPNWIERTGIARDIARGILYLHDECETQ 148
+ + I +V EYM+ GSL D L + E K PN ++ +A +A G+ Y+
Sbjct: 72 VVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD---MAAQVAAGMAYIE---RMN 125
Query: 149 IIHCDIKPQNILM 161
IH D++ NIL+
Sbjct: 126 YIHRDLRSANILV 138
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 35 KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
++G G+ G VYK N++ L A +E +E ++ EI+++ H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAK--NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
K ++ E+ G++ I+ ++ + + R + + +LH + +IIH
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIH 140
Query: 152 CDIKPQNILM 161
D+K N+LM
Sbjct: 141 RDLKAGNVLM 150
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15 TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
TP F +D +K + +G+GS G V + ++ KV+ +R+ + +
Sbjct: 11 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQK 67
Query: 73 T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
T E++++ + H N+++L + + LV E + G L D + + K+ + +
Sbjct: 68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 126
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
+ I R + GI Y+H + +I+H D+KP+N+L++ N R+
Sbjct: 127 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 170
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 127
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 128 -RVIHRDIKPENLLL 141
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15 TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
TP F +D +K + +G+GS G V + ++ KV+ +R+ + +
Sbjct: 35 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI---LCKDKITGQECAVKVISKRQVKQK 91
Query: 73 T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
T E++++ + H N+++L + + LV E + G L D + + K+ + +
Sbjct: 92 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 150
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
+ I R + GI Y+H + +I+H D+KP+N+L++ N R+
Sbjct: 151 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 194
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 3/132 (2%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
E +G+G G VY G + + +E+ +++ + F+ E+ +T H N+V +G
Sbjct: 39 ELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
+ ++ +L ++ +A+ + + IA++I +G+ YLH + I+H D
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 154 IKPQNILMDENR 165
+K +N+ D +
Sbjct: 156 LKSKNVFYDNGK 167
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 81
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYMS G L D L + P ++ +A IA G+ Y+
Sbjct: 82 VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD---MAAQIASGMAYVE---RMNY 135
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 136 VHRDLRAANILVGENLVCK 154
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 81/167 (48%), Gaps = 16/167 (9%)
Query: 15 TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
TP F +D +K + +G+GS G V + ++ KV+ +R+ + +
Sbjct: 34 ATPGMFVQHSTAIFSDRYKGQRVLGKGSFGEVI---LCKDKITGQECAVKVISKRQVKQK 90
Query: 73 T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
T E++++ + H N+++L + + LV E + G L D + + K+ + +
Sbjct: 91 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 149
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
+ I R + GI Y+H + +I+H D+KP+N+L++ N R+
Sbjct: 150 DAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRI 193
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Query: 24 ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRT 81
++KKI + FKE +G G+ S V +L AV + +K L +E + EI V+ +
Sbjct: 19 DIKKIFE-FKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKI 77
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIARDIARG 137
H N+V L + LV + +S G L D + F EK + + + R +
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEK-----DASTLIRQVLDA 132
Query: 138 ILYLHDECETQIIHCDIKPQNIL 160
+ YLH I+H D+KP+N+L
Sbjct: 133 VYYLH---RMGIVHRDLKPENLL 152
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLV-AVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY + + A+ L K E+ E + + E+++ H N++RL G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + ++ L+ EY G++ L F+ ++ +I ++A + Y H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------ELANALSYCHSK-- 130
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+L+
Sbjct: 131 -RVIHRDIKPENLLL 144
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY N+ ++A+ L K E+E + + EI++ H N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + + L+ E+ G L L F+ ++ ++E ++A + Y H E
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCH---E 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+LM
Sbjct: 133 RKVIHRDIKPENLLM 147
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 88
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 89 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 144 IMLLDRN 150
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY N+ ++A+ L K E+E + + EI++ H N++R+
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + + L+ E+ G L L F+ ++ ++E ++A + Y H E
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCH---E 132
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+LM
Sbjct: 133 RKVIHRDIKPENLLM 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 33 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 88
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 89 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 143
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 144 IMLLDRN 150
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY N+ ++A+ L K E+E + + EI++ H N++R+
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 92 YSLEVSKKILVYEYMSNGSLADIL-----FNAEKQPNWIERTGIARDIARGILYLHDECE 146
Y + + L+ E+ G L L F+ ++ ++E ++A + Y H E
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------ELADALHYCH---E 133
Query: 147 TQIIHCDIKPQNILM 161
++IH DIKP+N+LM
Sbjct: 134 RKVIHRDIKPENLLM 148
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
+G+G G VY +VA+ L K E+E + + EI++ HH N++RL
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIE-RTG-IARDIARGILYLHDECETQI 149
Y + + L+ EY G L L +K + E RT I ++A ++Y H + ++
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL---QKSCTFDEQRTATIMEELADALMYCHGK---KV 144
Query: 150 IHCDIKPQN 158
IH DIKP+N
Sbjct: 145 IHRDIKPEN 153
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 32 FKEKVGRGSSGTVYKG-AMINRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
+E +G G++ V ++ VA+ R LEK + E EI+ + + HH N+V
Sbjct: 14 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVS 72
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIA---RDIARGILYL 141
+ + LV + +S GS+ DI+ E + ++ + IA R++ G+ YL
Sbjct: 73 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 132
Query: 142 HDECETQIIHCDIKPQNILMDEN 164
H + IH D+K NIL+ E+
Sbjct: 133 HKNGQ---IHRDVKAGNILLGED 152
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYM+ GSL D L + P ++ ++ IA G+ Y+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIASGMAYVE---RMNY 132
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 133 VHRDLRAANILVGENLVCK 151
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 32 FKEKVGRGSSGTVYKG-AMINRQLVAVNR--LEKVLDEREREFQTEIKVIGRTHHRNLVR 88
+E +G G++ V ++ VA+ R LEK + E EI+ + + HH N+V
Sbjct: 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQCHHPNIVS 77
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIA---RDIARGILYL 141
+ + LV + +S GS+ DI+ E + ++ + IA R++ G+ YL
Sbjct: 78 YYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYL 137
Query: 142 HDECETQIIHCDIKPQNILMDEN 164
H + IH D+K NIL+ E+
Sbjct: 138 HKNGQ---IHRDVKAGNILLGED 157
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
K+G+G G V+ G VA+ L+ E F E +V+ + H LV+L Y++
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQL--YAV 78
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ I +V EYM+ GSL D L + P ++ ++ IA G+ Y+
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVD---MSAQIASGMAYVE---RMNY 132
Query: 150 IHCDIKPQNILMDENRCAK 168
+H D++ NIL+ EN K
Sbjct: 133 VHRDLRAANILVGENLVCK 151
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 36 VGRGSSGTVYKG---AMINRQ---LVAVNRL-EKVLDEREREFQTEIKVIGRTHHRNLVR 88
+G G+ G V++ ++ + +VAV L E+ + + +FQ E ++ + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADIL---------------------FNAEKQP--NWI 125
LLG L++EYM+ G L + L ++ P +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
E+ IAR +A G+ YL E + +H D+ +N L+ EN K
Sbjct: 175 EQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVK 214
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G++G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVCREEIERE----VSILRQVLHPNIITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDEN 164
L+D+N
Sbjct: 147 MLLDKN 152
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
L+D+N + +L
Sbjct: 147 MLLDKNIPIPHIKL 160
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 41 SGTVYKGAMINRQLVA-VNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++ +++V + ++E DER ++ H ++R+ G + +
Sbjct: 30 NGRYYAMKVLKKEIVVRLKQVEHTNDER--------LMLSIVTHPFIIRMWGTFQDAQQI 81
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
++ +Y+ G L +L +++ PN + + A ++ + YLH + II+ D+KP+NI
Sbjct: 82 FMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLHSK---DIIYRDLKPENI 137
Query: 160 LMDEN 164
L+D+N
Sbjct: 138 LLDKN 142
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
L+D+N + +L
Sbjct: 147 MLLDKNIPIPHIKL 160
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
L+D+N + +L
Sbjct: 147 MLLDKNIPIPHIKL 160
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%), Gaps = 14/144 (9%)
Query: 36 VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLVR 88
+G+GS G V + ++ KV+ +R+ + +T E++++ + H N+++
Sbjct: 40 LGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMK 96
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
L + + LV E + G L D + + K+ + ++ I R + GI Y+H + +
Sbjct: 97 LYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEVDAARIIRQVLSGITYMH---KNK 152
Query: 149 IIHCDIKPQNILMDENRCAKNFRL 172
I+H D+KP+N+L++ N R+
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRI 176
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
L+D+N + +L
Sbjct: 147 MLLDKNIPIPHIKL 160
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R ++ ERE + ++ H N++ L +
Sbjct: 34 STGLQYAAKFIKKRRTKSSRRGVSREDIERE----VSILKEIQHPNVITLHEVYENKTDV 89
Query: 100 ILVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQN 158
IL+ E ++ G L D L AEK+ E T + I G+ YLH QI H D+KP+N
Sbjct: 90 ILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPEN 144
Query: 159 I-LMDEN 164
I L+D N
Sbjct: 145 IMLLDRN 151
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 62 KVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQ 121
K +++ E EI ++ H N+++L + LV E+ G L + + N K
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK- 142
Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
+ + I + I GI YLH + I+H DIKP+NIL++ N ++
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINAMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36 VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
+G GSSGTV ++G+ R VAV R+ ++D + EIK++ + H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 76
Query: 94 LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
E + + L + + N +L D++ +K+ N I + R IA G+ +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 132
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
+IIH D+KPQNIL+ D+ A+N R+ I
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36 VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
+G GSSGTV ++G+ R VAV R+ ++D + EIK++ + H N++R Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 76
Query: 94 LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
E + + L + + N +L D++ +K+ N I + R IA G+ +LH
Sbjct: 77 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 132
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
+IIH D+KPQNIL+ D+ A+N R+ I
Sbjct: 133 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 40 SSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
S+G Y I ++ +R +E ERE + ++ + H N++ L +
Sbjct: 35 STGLEYAAKFIKKRQSRASRRGVSREEIERE----VSILRQVLHHNVITLHDVYENRTDV 90
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+L+ E +S G L D L E E T + I G+ YLH + +I H D+KP+NI
Sbjct: 91 VLILELVSGGELFDFLAQKESLSEE-EATSFIKQILDGVNYLHTK---KIAHFDLKPENI 146
Query: 160 -LMDENRCAKNFRL 172
L+D+N + +L
Sbjct: 147 MLLDKNIPIPHIKL 160
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 9/145 (6%)
Query: 22 YAELKKITDGFKEKVGRGSSGTVYKGA-MINRQLVAVNRLEK-VLDEREREFQTEIKVIG 79
Y EL K + E +G G V ++ ++VA+ ++K L +TEI+ +
Sbjct: 5 YDELLKYYE-LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 80 RTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGI 138
H+++ +L + LE + KI +V EY G L D + + ++ R + R I +
Sbjct: 64 NLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAV 121
Query: 139 LYLHDECETQIIHCDIKPQNILMDE 163
Y+H + H D+KP+N+L DE
Sbjct: 122 AYVHSQ---GYAHRDLKPENLLFDE 143
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 13/138 (9%)
Query: 28 ITDGFK--EKVGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHR 84
++D F+ ++GRG++ VY+ Q A+ L+K +D++ +TEI V+ R H
Sbjct: 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRTEIGVLLRLSHP 108
Query: 85 NLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLH 142
N+++L ++ LV E ++ G L D + ++ + ER + I + YLH
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIV---EKGYYSERDAADAVKQILEAVAYLH 165
Query: 143 DECETQIIHCDIKPQNIL 160
E I+H D+KP+N+L
Sbjct: 166 ---ENGIVHRDLKPENLL 180
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36 VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
+G GSSGTV ++G+ R VAV R+ ++D + EIK++ + H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 94
Query: 94 LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
E + + L + + N +L D++ +K+ N I + R IA G+ +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 150
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
+IIH D+KPQNIL+ D+ A+N R+ I
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 32/160 (20%)
Query: 36 VGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH-HRNLVRLLGYS 93
+G GSSGTV ++G+ R VAV R+ ++D + EIK++ + H N++R Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALM-EIKLLTESDDHPNVIRY--YC 94
Query: 94 LEVSKKIL-VYEYMSNGSLADIL---------FNAEKQPNWIERTGIARDIARGILYLHD 143
E + + L + + N +L D++ +K+ N I + R IA G+ +LH
Sbjct: 95 SETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI---SLLRQIASGVAHLH- 150
Query: 144 ECETQIIHCDIKPQNILM--------DENRCAKNFRLWIG 175
+IIH D+KPQNIL+ D+ A+N R+ I
Sbjct: 151 --SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEIXINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 41 SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI 100
+G Y I ++ ++ +R +E ERE + ++ H N++ L + +
Sbjct: 36 TGKEYAAKFIKKRRLSSSRRGVSREEIERE----VNILREIRHPNIITLHDIFENKTDVV 91
Query: 101 LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
L+ E +S G L D L AEK+ E T + I G+ YLH + +I H D+KP+NI
Sbjct: 92 LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENI 146
Query: 160 -LMDEN 164
L+D+N
Sbjct: 147 MLLDKN 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 15 TTPFSFSYAELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQ 72
TP F +D +K + +G+GS G V + ++ KV+ +R+ + +
Sbjct: 11 ATPGXFVQHSTAIFSDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQK 67
Query: 73 T-------EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
T E++++ + H N+ +L + + LV E + G L D + + K+ + +
Sbjct: 68 TDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII-SRKRFSEV 126
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRL 172
+ I R + GI Y H + +I+H D+KP+N+L++ N R+
Sbjct: 127 DAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRI 170
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 34/167 (20%)
Query: 23 AELKKITDG---FKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDEREREFQ 72
A+LK+I+ F E++G G VYKG + Q VA+ L +K EF+
Sbjct: 18 AKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 73 TEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILF---------------- 116
E + R H N+V LLG + +++ Y S+G L + L
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 117 --NAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
+A + P+++ + IA G+ YL ++H D+ +N+L+
Sbjct: 138 VKSALEPPDFVH---LVAQIAAGMEYLSSH---HVVHKDLATRNVLV 178
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK I+ ++G+G+ G+V Y N LVAV +L+ +++R+F
Sbjct: 5 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 59
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
Q EI+++ H +V+ G S ++ LV EY+ +G L D L + +
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 119
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
+ I +G+ YL + +H D+ +NIL++
Sbjct: 120 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 149
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 41 SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI 100
+G Y I ++ ++ +R +E ERE + ++ H N++ L + +
Sbjct: 29 TGKEYAAKFIKKRRLSSSRRGVSREEIERE----VNILREIRHPNIITLHDIFENKTDVV 84
Query: 101 LVYEYMSNGSLADILFNAEKQP-NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
L+ E +S G L D L AEK+ E T + I G+ YLH + +I H D+KP+NI
Sbjct: 85 LILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENI 139
Query: 160 -LMDEN 164
L+D+N
Sbjct: 140 MLLDKN 145
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK I+ ++G+G+ G+V Y N LVAV +L+ +++R+F
Sbjct: 4 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 58
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
Q EI+++ H +V+ G S ++ LV EY+ +G L D L + +
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 118
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
+ I +G+ YL + +H D+ +NIL++
Sbjct: 119 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 148
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 69
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 125
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 126 HRDIKPENLLLDE 138
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+K+G G G V+ G N VAV L K + F E ++ H LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
+ ++ E+M+ GSL D L + E P I+ + IA G+ Y+ +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID---FSAQIAEGMAYIERK---NY 130
Query: 150 IHCDIKPQNILMDENRCAKNFRLWIGKVDE 179
IH D++ N+L+ E+ K + +V E
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIE 160
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 15/153 (9%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK I+ ++G+G+ G+V Y N LVAV +L+ +++R+F
Sbjct: 17 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKI--LVYEYMSNGSLADILFNAEKQPNWIERTG 129
Q EI+++ H +V+ G S ++ LV EY+ +G L D L + +
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
+ I +G+ YL + +H D+ +NIL++
Sbjct: 132 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 161
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 71
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 127
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 128 HRDIKPENLLLDE 140
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 28/149 (18%)
Query: 33 KEKVGRGSSGTV-------------YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
K+ +GRG S V K + + ++ +LE+V + RE +V G
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAG 158
Query: 80 RTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIA 135
H ++ L+ S LV++ M G L D L +EK E I R +
Sbjct: 159 HPH---IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK-----ETRSIMRSLL 210
Query: 136 RGILYLHDECETQIIHCDIKPQNILMDEN 164
+ +LH I+H D+KP+NIL+D+N
Sbjct: 211 EAVSFLH---ANNIVHRDLKPENILLDDN 236
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+++G G G V+ G N VAV L K + F E ++ H LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQ----PNWIERTGIARDIARGILYLHDECETQI 149
++ EYM+ GSL D L + E P I+ + IA G+ Y+
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID---FSAQIAEGMAYIE---RKNY 131
Query: 150 IHCDIKPQNILMDENRCAK 168
IH D++ N+L+ E+ K
Sbjct: 132 IHRDLRAANVLVSESLMCK 150
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G+G+ G V K ++ + A+ ++ +E+ +E+ ++ +H+ +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 95 E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
E V KK ++ EY N +L D++ + E + R I + Y+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H + IIH D+KP NI +DE+R K
Sbjct: 133 HSQG---IIHRDLKPMNIFIDESRNVK 156
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 34 EKVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
+ +G G+ G V + + VAV +++ +D E + EI + +H N+V+
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN-IKKEICINKMLNHENVVKFY 70
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G+ E + + L EY S G L D + P + + G++YLH I
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRFFHQLMAGVVYLHG---IGIT 126
Query: 151 HCDIKPQNILMDE 163
H DIKP+N+L+DE
Sbjct: 127 HRDIKPENLLLDE 139
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQT-EIKVIGRTHHRNLVRLLGYS 93
+G+G++ V++G L A+ + R + Q E +V+ + +H+N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 94 LEVS--KKILVYEYMSNGSLADIL---FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
E + K+L+ E+ GSL +L NA P E + RD+ G+ +L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLR---ENG 132
Query: 149 IIHCDIKPQNIL 160
I+H +IKP NI+
Sbjct: 133 IVHRNIKPGNIM 144
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 70 EFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQP-NWIERT 128
E + E+ ++ H N++ L + +L+ E +S G L D L AEK+ E T
Sbjct: 75 EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEAT 132
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNI-LMDEN 164
+ I G+ YLH + +I H D+KP+NI L+D+N
Sbjct: 133 QFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKN 166
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
EK+G G G+V+K ++ + A+ R +K L DE+ RE V+G+ H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 71
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
VR E ++ EY + GSLAD + + ++ E + + RG+ Y+H
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 144 ECETQIIHCDIKPQNILM 161
++H DIKP NI +
Sbjct: 132 ---MSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
EK+G G G+V+K ++ + A+ R +K L DE+ RE V+G+ H ++
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
VR E ++ EY + GSLAD + + ++ E + + RG+ Y+H
Sbjct: 74 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 133
Query: 144 ECETQIIHCDIKPQNILM 161
++H DIKP NI +
Sbjct: 134 ---MSLVHMDIKPSNIFI 148
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 15/140 (10%)
Query: 32 FKEKVGRGSSGTVYKGAMINR------QLVAVNRLEKVLDEREREFQTEI----KVIGRT 81
F E +G+G+ ++KG + R QL L KVLD+ R + ++ +
Sbjct: 12 FNESLGQGTFTKIFKG--VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H++LV G + + ILV E++ GSL L + N + + +A+ +A + +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 142 HDECETQIIHCDIKPQNILM 161
E +IH ++ +NIL+
Sbjct: 130 E---ENTLIHGNVCAKNILL 146
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 14 LTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT 73
L + ++ + ELK + + +G+G G V G + VAV ++ D + F
Sbjct: 3 LGSGWALNMKELKLL-----QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLA 54
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIA 131
E V+ + H NLV+LLG +E + +V EYM+ GSL D L + + + +
Sbjct: 55 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
D+ + YL +H D+ +N+L+ E+ AK
Sbjct: 115 LDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAK 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
EK+G G G+V+K ++ + A+ R +K L DE+ RE V+G+ H ++
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 71
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
VR E ++ EY + GSLAD + + ++ E + + RG+ Y+H
Sbjct: 72 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 131
Query: 144 ECETQIIHCDIKPQNILM 161
++H DIKP NI +
Sbjct: 132 ---MSLVHMDIKPSNIFI 146
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + VAV +++ +R E+ ++ HH N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I + + R + YLH++ +IH D
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI--ATVCLSVLRALSYLHNQ---GVIHRD 166
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 167 IKSDSILLTSD 177
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 31/155 (20%)
Query: 32 FKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDEREREFQTEIKVIGRTHHR 84
F E++G G VYKG + Q VA+ L +K EF+ E + R H
Sbjct: 13 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHP 72
Query: 85 NLVRLLGYSLEVSKKILVYEYMSNGSLADILF------------------NAEKQPNWIE 126
N+V LLG + +++ Y S+G L + L +A + P+++
Sbjct: 73 NVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVH 132
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
+ IA G+ YL ++H D+ +N+L+
Sbjct: 133 ---LVAQIAAGMEYLSSH---HVVHKDLATRNVLV 161
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQT-EIKVIGRTHHRNLVRLLGYS 93
+G+G++ V++G L A+ + R + Q E +V+ + +H+N+V+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 94 LEVS--KKILVYEYMSNGSLADIL---FNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
E + K+L+ E+ GSL +L NA P E + RD+ G+ +L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPE-SEFLIVLRDVVGGMNHLR---ENG 132
Query: 149 IIHCDIKPQNIL 160
I+H +IKP NI+
Sbjct: 133 IVHRNIKPGNIM 144
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 16/138 (11%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVL----DERE--REFQTEIKVIGRTHHRNL 86
EK+G G G+V+K ++ + A+ R +K L DE+ RE V+G+ H ++
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAH-AVLGQ--HSHV 69
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI---ERTGIARDIARGILYLHD 143
VR E ++ EY + GSLAD + + ++ E + + RG+ Y+H
Sbjct: 70 VRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS 129
Query: 144 ECETQIIHCDIKPQNILM 161
++H DIKP NI +
Sbjct: 130 ---MSLVHMDIKPSNIFI 144
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 36 VGRGSSGTVYKGAMIN-RQLVAVNRLE-----KVLDEREREFQTEIKVIGRTHHRNLVRL 89
+G G TVYK N Q+VA+ +++ + D R EIK++ H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNA-EKQPNWIERTGIARDIARGILYLHDECETQ 148
L S LV+++M I N+ P+ I+ + +G+ YLH +
Sbjct: 78 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM--TLQGLEYLH---QHW 132
Query: 149 IIHCDIKPQNILMDENRCAK 168
I+H D+KP N+L+DEN K
Sbjct: 133 ILHRDLKPNNLLLDENGVLK 152
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 19/179 (10%)
Query: 10 NYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGA-MINRQLVAVNRLEKVLDERE 68
+ S P + S ++IT K+G G+ G VYK + + VA+ R+ ++ E E
Sbjct: 21 SMSVSAAPSATSIDRYRRIT-----KLGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEE 74
Query: 69 REFQT---EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
T E+ ++ HRN++ L + L++EY N D+ +K P+
Sbjct: 75 GVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVS 130
Query: 126 ERT--GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
R + G+ + H + +H D+KPQN+L+ + ++ L IG AR+
Sbjct: 131 MRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%), Gaps = 18/144 (12%)
Query: 37 GRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL-----G 91
RG G V+K ++N VAV ++ + D++ + + EI H NL++ + G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAV-KIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC------ 145
+LEV + L+ + GSL D L W E +A ++RG+ YLH++
Sbjct: 82 SNLEV-ELWLITAFHDKGSLTDYLKG--NIITWNELCHVAETMSRGLSYLHEDVPWCRGE 138
Query: 146 --ETQIIHCDIKPQNILMDENRCA 167
+ I H D K +N+L+ + A
Sbjct: 139 GHKPSIAHRDFKSKNVLLKSDLTA 162
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 15/153 (9%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV----YKGAMINR-QLVAVNRLEKVLDEREREF 71
P F LK I+ ++G+G+ G+V Y N LVAV +L+ +++R+F
Sbjct: 1 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 55
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTG 129
Q EI+++ H +V+ G S + LV EY+ +G L D L + +
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLL 115
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
+ I +G+ YL + +H D+ +NIL++
Sbjct: 116 YSSQICKGMEYLGSR---RCVHRDLAARNILVE 145
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT----EIKVIGRTHHRNLVR 88
EK+G G+ GTV+K NR+ + L++V LD+ + + EI ++ H+N+VR
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
L K LV+E+ + L N + P ++ + +G+ + H
Sbjct: 66 LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVK--SFLFQLLKGLGFCHSR-- 120
Query: 147 TQIIHCDIKPQNILMDEN 164
++H D+KPQN+L++ N
Sbjct: 121 -NVLHRDLKPQNLLINRN 137
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKV-LDEREREFQT----EIKVIGRTHHRNLVR 88
EK+G G+ GTV+K NR+ + L++V LD+ + + EI ++ H+N+VR
Sbjct: 8 EKIGEGTYGTVFKAK--NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECE 146
L K LV+E+ + L N + P ++ + +G+ + H
Sbjct: 66 LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGDLDPEIVK--SFLFQLLKGLGFCHSR-- 120
Query: 147 TQIIHCDIKPQNILMDEN 164
++H D+KPQN+L++ N
Sbjct: 121 -NVLHRDLKPQNLLINRN 137
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+ +G+G G V G + VAV ++ D + F E V+ + H NLV+LLG
Sbjct: 27 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 94 LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
+E + +V EYM+ GSL D L + + + + D+ + YL +H
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 140
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N+L+ E+ AK
Sbjct: 141 RDLAARNVLVSEDNVAK 157
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 32 FKEKVGRGSSGTVYKGAMINR------QLVAVNRLEKVLDEREREFQTEI----KVIGRT 81
F E +G+G+ ++KG + R QL L KVLD+ R + ++ +
Sbjct: 12 FNESLGQGTFTKIFKG--VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H++LV G + ILV E++ GSL L + N + + +A+ +A + +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 142 HDECETQIIHCDIKPQNILM 161
E +IH ++ +NIL+
Sbjct: 130 E---ENTLIHGNVCAKNILL 146
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+ +G+G G V G + VAV ++ D + F E V+ + H NLV+LLG
Sbjct: 12 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 94 LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
+E + +V EYM+ GSL D L + + + + D+ + YL +H
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 125
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N+L+ E+ AK
Sbjct: 126 RDLAARNVLVSEDNVAK 142
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+ +G+G G V G + VAV ++ D + F E V+ + H NLV+LLG
Sbjct: 199 QTIGKGEFGDVMLGDYRGNK-VAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 94 LEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIE-RTGIARDIARGILYLHDECETQIIH 151
+E + +V EYM+ GSL D L + + + + D+ + YL +H
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVH 312
Query: 152 CDIKPQNILMDENRCAK 168
D+ +N+L+ E+ AK
Sbjct: 313 RDLAARNVLVSEDNVAK 329
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36 VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
+GRG G V+ M +L A +L K ++ + +Q E K++ + H R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
Y+ E + LV M+ G + ++N E P + E I I G+ +LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36 VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
+GRG G V+ M +L A +L K ++ + +Q E K++ + H R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
Y+ E + LV M+ G + ++N E P + E I I G+ +LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++S L D + + TGI + + L+ +
Sbjct: 70 LLDVIHTENKLYLVFEFLSM-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36 VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
+GRG G V+ M +L A +L K ++ + +Q E K++ + H R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
Y+ E + LV M+ G + ++N E P + E I I G+ +LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 12 STLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDERER 69
ST + P F ++ K+T E +G G+ V +GA + N + AV +EK
Sbjct: 2 STDSLPGKFE--DMYKLT---SELLGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRS 55
Query: 70 EFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
E++ + + ++N++ L+ + + ++ LV+E + GS IL + +KQ ++ ER
Sbjct: 56 RVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNERE 112
Query: 129 G--IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
+ RD+A + +LH + I H D+KP+NIL +
Sbjct: 113 ASRVVRDVAAALDFLHTK---GIAHRDLKPENILCE 145
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 36 VGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQ---TEIKVIGRTHHRNLVRLLG 91
+GRG G V+ M +L A +L K ++ + +Q E K++ + H R +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNA-EKQPNWIERTGI--ARDIARGILYLHDECET 147
Y+ E + LV M+ G + ++N E P + E I I G+ +LH +
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QR 308
Query: 148 QIIHCDIKPQNILMDEN 164
II+ D+KP+N+L+D++
Sbjct: 309 NIIYRDLKPENVLLDDD 325
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 11 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++S L D + + TGI + + L+ +
Sbjct: 69 LLDVIHTENKLYLVFEFLSM-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 78
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A++ P I + IA + RG+ YL ++
Sbjct: 79 FYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREK--H 134
Query: 148 QIIHCDIKPQNILMD 162
QI+H D+KP NIL++
Sbjct: 135 QIMHRDVKPSNILVN 149
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 18/147 (12%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G+G+ G V K ++ + A+ ++ +E+ +E+ ++ +H+ +VR L
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 95 E----------VSKKILVY---EYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
E V KK ++ EY N +L D++ + E + R I + Y+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H + IIH ++KP NI +DE+R K
Sbjct: 133 HSQG---IIHRNLKPXNIFIDESRNVK 156
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 12 STLTTPFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDE 66
S + P F LKKI D +G G G V Y N ++VAV L+
Sbjct: 3 SPASDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP 57
Query: 67 RERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPN 123
+ R ++ EI ++ +H ++++ G + +K L V EY+ GSL D L
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIG 115
Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ A+ I G+ YLH + IH ++ +N+L+D +R K
Sbjct: 116 LAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVK 157
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 32 FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F E +G G+ V+ + +L A+ ++K R+ + EI V+ + H N+V L
Sbjct: 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDECETQ 148
+ LV + +S G L D + ++ + E+ + + + + YLH E
Sbjct: 73 DIYESTTHYYLVMQLVSGGELFDRIL---ERGVYTEKDASLVIQQVLSAVKYLH---ENG 126
Query: 149 IIHCDIKPQNIL 160
I+H D+KP+N+L
Sbjct: 127 IVHRDLKPENLL 138
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDERE---REFQTEIKVIGRTHHRNLVRLLG 91
+G+GS VY+ I+ L VA+ ++K + + Q E+K+ + H +++ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
Y + + LV E NG + L N K + E I G+LYLH I+H
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILH 135
Query: 152 CDIKPQNILMDEN 164
D+ N+L+ N
Sbjct: 136 RDLTLSNLLLTRN 148
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 27/163 (16%)
Query: 22 YAELKKITDGF--KEKVGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEI 75
Y + +DG+ KE +G GS V+K + + KV+D+ +R+ EI
Sbjct: 19 YFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-------KVIDKSKRDPSEEI 71
Query: 76 KVIGR-THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGI 130
+++ R H N++ L + LV E M G L D + F +E++ +++ T
Sbjct: 72 EILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-- 129
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
I + + YLH + ++H D+KP NIL +DE+ + R+
Sbjct: 130 ---IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRI 166
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 12 STLTTPFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDE 66
S + P F LKKI D +G G G V Y N ++VAV L+
Sbjct: 3 SPASDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGP 57
Query: 67 RERE-FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPN 123
+ R ++ EI ++ +H ++++ G + +K L V EY+ GSL D L
Sbjct: 58 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL--PRHSIG 115
Query: 124 WIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ A+ I G+ YLH + IH ++ +N+L+D +R K
Sbjct: 116 LAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVK 157
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-----REFQTEIKVIGRTHHRNL 86
FK K+G G+ G V+ ++ + + R+ K +++ + + EI+V+ H N+
Sbjct: 26 FKRKLGSGAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNI 82
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
+++ + +V E G L + + +A+ + + +A + + + Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ ++H D+KP+NIL +
Sbjct: 143 Q---HVVHKDLKPENILFQDT 160
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 133
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 134 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 231
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 85
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 86 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 183
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 84
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 85 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 182
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 81
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 82 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 179
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 33 KEKVGRGSSGTVYKGA-MINRQLVAVNRLE--KVLDERER-EFQTEIKVIGRTHHRNLVR 88
++K+GRG VY+ A +++ VA+ +++ ++D + R + EI ++ + +H N+++
Sbjct: 37 EKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
+E ++ +V E G L+ ++ + +KQ I + + + L +
Sbjct: 97 YYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR 156
Query: 149 IIHCDIKPQNILMDENRCAKNFRLWIGKVDEARS 182
++H DIKP N+ + K L +G+ +++
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 92
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 190
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 26/138 (18%)
Query: 51 NRQLVAVNRLEKVLDEREREF-----------------QTEIKVIGRTHHRNLVRLLGYS 93
+ + A+ + EK L E++R+F + E+++I + + G
Sbjct: 53 DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGII 112
Query: 94 LEVSKKILVYEYMSNGSLA---DILFNAEKQPNWIERTGIARDIARGIL----YLHDECE 146
+ ++YEYM N S+ + F +K + + I + +L Y+H+E
Sbjct: 113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE-- 170
Query: 147 TQIIHCDIKPQNILMDEN 164
I H D+KP NILMD+N
Sbjct: 171 KNICHRDVKPSNILMDKN 188
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVL------DEREREFQTEI------KVIGRT 81
+ +G G+ G V I NR+ KV D E++ I K+IG+
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK- 77
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL---------------FNAEKQPNWIE 126
H+N++ LLG + ++ EY S G+L + L N E+Q + +
Sbjct: 78 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A +ARG+ YL + IH D+ +N+L+ E+ K
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMK 175
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36 VGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRGS G V KG I R A ++ K E F+ EI+++ H N++RL
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ + LV E + G L + + + ++ + I +D+ + Y H + + H
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 129
Query: 152 CDIKPQNILM 161
D+KP+N L
Sbjct: 130 RDLKPENFLF 139
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
+G+GS G V K I +Q AV + K + ++ T E++++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ S +V E + G L D + K+ + + I + + GI Y+H + I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 152 CDIKPQNILMD 162
D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 9/131 (6%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
+G+GS G V K I +Q AV + K + ++ T E++++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ S +V E + G L D + K+ + + I + + GI Y+H + I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMH---KHNIVH 144
Query: 152 CDIKPQNILMD 162
D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
E +GRG G V++ + + + + KV + + EI ++ HRN++ L
Sbjct: 11 EDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESF 70
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
+ + ++++E++S + + + + + N E + + +LH I H D
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFD 127
Query: 154 IKPQNILMDENRCA 167
I+P+NI+ R +
Sbjct: 128 IRPENIIYQTRRSS 141
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 11/130 (8%)
Query: 36 VGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRGS G V KG I R A ++ K E F+ EI+++ H N++RL
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRR---AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ + LV E + G L + + + ++ + I +D+ + Y H + + H
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVH-KRVFRESDAARIMKDVLSAVAYCH---KLNVAH 146
Query: 152 CDIKPQNILM 161
D+KP+N L
Sbjct: 147 RDLKPENFLF 156
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 10 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++S + +K + TGI + + L+ +
Sbjct: 68 LLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KP+N+L++ K
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIK 144
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 9/131 (6%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRLLG 91
+G+GS G V K I +Q AV + K + ++ T E++++ + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKA-SAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ S +V E + G L D + K+ + + I + + GI Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIK-RKRFSEHDAARIIKQVFSGITYMHKH---NIVH 144
Query: 152 CDIKPQNILMD 162
D+KP+NIL++
Sbjct: 145 RDLKPENILLE 155
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++S + +K + TGI + + L+ +
Sbjct: 70 LLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KP+N+L++ K
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIK 146
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 27/157 (17%)
Query: 28 ITDGF--KEKVGRGSSG----TVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR- 80
+DG+ KE +G GS V+K + + KV+D+ +R+ EI+++ R
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAV-------KVIDKSKRDPSEEIEILLRY 77
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL----FNAEKQPNWIERTGIARDIAR 136
H N++ L + LV E M G L D + F +E++ +++ T I +
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT-----IGK 132
Query: 137 GILYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
+ YLH + ++H D+KP NIL +DE+ + R+
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRI 166
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 34 EKVGRGSSGTVYKG-AMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRTHHRNLVRL 89
+K+G G+ TVYKG + + LVA+ + L+ E T E+ ++ H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
LV+EY+ + L L + N + RG+ Y H + ++
Sbjct: 66 HDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KV 121
Query: 150 IHCDIKPQNILMDE 163
+H D+KPQN+L++E
Sbjct: 122 LHRDLKPQNLLINE 135
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 16 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIK 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 11 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 70 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIK 146
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 16 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 73
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 74 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIK 150
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 13 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 71 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIK 147
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 11 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIK 145
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 95
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 96 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 151
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 152 KIMHRDVKPSNILVN 166
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 10 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 10 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 32 FKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
KE++G G G V + + + VA+ + + L + RE + EI+++ + +H N+V
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 78
Query: 90 LGYSLEVSK------KILVYEYMSNGSLADILFNAEKQPNWIE---RTGIARDIARGILY 140
+ K +L EY G L L E E RT ++ DI+ + Y
Sbjct: 79 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRY 137
Query: 141 LHDECETQIIHCDIKPQNILM 161
LH E +IIH D+KP+NI++
Sbjct: 138 LH---ENRIIHRDLKPENIVL 155
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 15/141 (10%)
Query: 32 FKEKVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRL 89
KE++G G G V + + + VA+ + + L + RE + EI+++ + +H N+V
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSA 77
Query: 90 LGYSLEVSK------KILVYEYMSNGSLADILFNAEKQPNWIE---RTGIARDIARGILY 140
+ K +L EY G L L E E RT ++ DI+ + Y
Sbjct: 78 REVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRY 136
Query: 141 LHDECETQIIHCDIKPQNILM 161
LH E +IIH D+KP+NI++
Sbjct: 137 LH---ENRIIHRDLKPENIVL 154
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 10 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIK 144
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 130
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 131 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 186
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 187 KIMHRDVKPSNILVN 201
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 20 FSYAELKKITDGFKE--KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREF 71
+ ELK D F++ ++G G+ G V+K G ++ R+L+ + + ++ RE
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGI 130
Q V+ + +V G + + E+M GSL +L A + P I + I
Sbjct: 59 Q----VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSI 114
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMD 162
A + +G+ YL ++ +I+H D+KP NIL++
Sbjct: 115 A--VIKGLTYLREK--HKIMHRDVKPSNILVN 142
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 69 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 124
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 125 KIMHRDVKPSNILVN 139
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 13 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 70
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 71 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIK 147
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLE---KVLDEREREFQTEIKVIGR- 80
+ TDG+ KE +G GS ++ R + +E K++D+ +R+ EI+++ R
Sbjct: 19 QFTDGYEVKEDIGVGSY------SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRY 72
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGI 138
H N++ L + +V E M G L D + +Q + ER + + I + +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKIL---RQKFFSEREASAVLFTITKTV 129
Query: 139 LYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
YLH + ++H D+KP NIL +DE+ ++ R+
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 21/155 (13%)
Query: 36 VGRGSSGTVYKGAMINRQLVAVNRLEKVL-----DERE-REFQTEIKVIGRTHHRNLVRL 89
+G G G+V +G + ++ K + +RE EF +E + H N++RL
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 90 LGYSLEVS-----KKILVYEYMSNGSLADILFNA--EKQPNWIERTGIAR---DIARGIL 139
LG +E+S K +++ +M G L L + E P I + + DIA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 140 YLHDECETQIIHCDIKPQNILM--DENRCAKNFRL 172
YL + +H D+ +N ++ D C +F L
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGL 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ G V+K G ++ R+L+ + + ++ RE Q V+ + +V
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQ----VLHECNSPYIVG 87
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI-ERTGIARDIARGILYLHDECET 147
G + + E+M GSL +L A + P I + IA + +G+ YL ++
Sbjct: 88 FYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREK--H 143
Query: 148 QIIHCDIKPQNILMD 162
+I+H D+KP NIL++
Sbjct: 144 KIMHRDVKPSNILVN 158
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIK 143
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 66 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KPQN+L++ K
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIK 142
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 145
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 146 IKSDSILLTHD 156
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 141
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 142 IKSDSILLTHD 152
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 18/160 (11%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTV--YKGAMINR---QLVAVNRLEKVLDERERE- 70
P F LKKI D +G G G V Y N ++VAV L+ + R
Sbjct: 25 PTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG 79
Query: 71 FQTEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERT 128
++ EI ++ +H ++++ G + L V EY+ GSL D L +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL--PRHSIGLAQLL 137
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A+ I G+ YLH + IH D+ +N+L+D +R K
Sbjct: 138 LFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVK 174
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 152
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 153 IKSDSILLTHD 163
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 141 -RFIHRDLAARNLLL 154
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 84 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 140
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 141 -RFIHRDLAARNLLL 154
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 150
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 151 IKSDSILLTHD 161
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36 VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
+G+GS G V+ I+ RQL A+ L+K L R+R + E ++ +H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 90 LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
Y+ + K+ L+ +++ G L +++F E ++ +A D +LH
Sbjct: 92 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 144 ECETQIIHCDIKPQNILMDE 163
II+ D+KP+NIL+DE
Sbjct: 145 ---LGIIYRDLKPENILLDE 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 135 -RFIHRDLAARNLLL 148
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 78 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 134
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 135 -RFIHRDLAARNLLL 148
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 65/135 (48%), Gaps = 11/135 (8%)
Query: 34 EKVGRGSSGTVYKG---AMINRQL-VAVNRLEK-VLDERER--EFQTEIKVIGRTHHRNL 86
EK+G GS G V +G A + + VAV L+ VL + E +F E+ + HRNL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+RL G L K +V E GSL D L + + A +A G+ YL +
Sbjct: 74 IRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK-- 130
Query: 147 TQIIHCDIKPQNILM 161
+ IH D+ +N+L+
Sbjct: 131 -RFIHRDLAARNLLL 144
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36 VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
+G+GS G V+ I+ RQL A+ L+K L R+R + E ++ +H +V+L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 90 LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
Y+ + K+ L+ +++ G L +++F E ++ +A D +LH
Sbjct: 92 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 144
Query: 144 ECETQIIHCDIKPQNILMDE 163
II+ D+KP+NIL+DE
Sbjct: 145 ---LGIIYRDLKPENILLDE 161
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 11/154 (7%)
Query: 15 TTPFSFSYAELKKITDGFK--EKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERE 68
TP F ++ +++ ++ +K+G G+ G V K + R + + R V
Sbjct: 22 ATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERA-IKIIRKTSVSTSSN 80
Query: 69 REFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERT 128
+ E+ V+ H N+++L + + LV E G L D + + K N ++
Sbjct: 81 SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK-FNEVDAA 139
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
I + + G+ YLH + I+H D+KP+N+L++
Sbjct: 140 VIIKQVLSGVTYLH---KHNIVHRDLKPENLLLE 170
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 20 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 75 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 129
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 130 --IAKGMNYLEDR---RLVHRDLAARNVLV 154
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36 VGRGSSGTVYKGAMIN----RQLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
+G+GS G V+ I+ RQL A+ L+K L R+R + E ++ +H +V+L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 90 LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
Y+ + K+ L+ +++ G L +++F E ++ +A D +LH
Sbjct: 93 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD------HLHS 145
Query: 144 ECETQIIHCDIKPQNILMDE 163
II+ D+KP+NIL+DE
Sbjct: 146 ---LGIIYRDLKPENILLDE 162
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 20 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 74
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 75 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 129
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 130 --IAKGMNYLEDR---RLVHRDLAARNVLV 154
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQL-VAVNRLE-KVLDERERE-FQTEIKVIGRTHHRNLVR 88
F ++GRGS TVYKG + VA L+ + L + ER+ F+ E + + H N+VR
Sbjct: 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVR 89
Query: 89 LLGYSLEVSKK-----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
S E + K +LV E ++G+L L + + R+ R I +G+ +LH
Sbjct: 90 FYD-SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW-CRQILKGLQFLHT 147
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+K NI +
Sbjct: 148 RT-PPIIHRDLKCDNIFI 164
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 17 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW
Sbjct: 72 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 124
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 125 VQIAKGMNYLEDR---RLVHRDLAARNVLV 151
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 9 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 66
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ L D + + TGI + + L+ +
Sbjct: 67 LLDVIHTENKLYLVFEFLHQ-DLKDFM-------DASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KP+N+L++ K
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIK 143
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 18 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 73 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 18 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 73 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 272
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 273 IKSDSILLTHD 283
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 16 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLV 150
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 18 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 73 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 35 KVGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
K+G GS+G V + + +LVAV +++ +R E+ ++ H N+V +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 94 LEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCD 153
L + +V E++ G+L DI+ + I +A + + + LH + +IH D
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA--VLQALSVLHAQG---VIHRD 195
Query: 154 IKPQNILMDEN 164
IK +IL+ +
Sbjct: 196 IKSDSILLTHD 206
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 19 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 74 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 10 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 64
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 65 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 119
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 120 --IAKGMNYLEDR---RLVHRDLAARNVLV 144
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK +VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 26/148 (17%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR--------GILY 140
LL +K LV+E++ + +K + TGI + + G+ +
Sbjct: 70 LLDVIHTENKLYLVFEHVDQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
H +++H D+KPQN+L++ K
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIK 146
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 23 AELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIK 76
E KKI + +G G+ GTVYKG I + VA+ L E + +E E
Sbjct: 40 TEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGI 130
V+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 95 VMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 150
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 151 ---IAKGMNYLEDR---RLVHRDLAARNVLV 175
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 19 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 74 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 17 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 71
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 72 MASVDNPHVCRLLGICL-TSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ---- 126
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 127 --IAKGMNYLEDR---RLVHRDLAARNVLV 151
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 18 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 73 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 19 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 74 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 12 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 69
Query: 89 LLGYSLEVSKKILVYE--------YMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
LL +K LV+E +M +L I K + +G+ +
Sbjct: 70 LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKS--------YLFQLLQGLAF 121
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
H +++H D+KPQN+L++ K
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIK 146
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 19 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 73
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 74 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 128
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 129 --IAKGMNYLEDR---RLVHRDLAARNVLV 153
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 22 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 76
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 77 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 131
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 132 --IAKGMNYLEDR---RLVHRDLAARNVLV 156
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 16 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 123
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 124 VQIAKGMNYLEDR---RLVHRDLAARNVLV 150
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 26 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 80
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 81 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 135
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 136 --IAKGMNYLEDR---RLVHRDLAARNVLV 160
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 68 EREFQTEIKVIGRTHHRNLVRLLG--YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
E + EI+++ R H+N+++L+ Y+ E K +V EY G + EK+
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
+ G + G+ YLH + I+H DIKP N+L+
Sbjct: 110 QAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLL 142
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 16 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 16 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 18 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 73 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 128 --IAKGMNYLEDR---RLVHRDLAARNVLV 152
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 23 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 78 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 132
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 133 --IAKGMNYLEDR---RLVHRDLAARNVLV 157
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 11/139 (7%)
Query: 35 KVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDER--EREFQTEIKVIGRTHHRNLVRL 89
K+G GS G V+K NR Q+VA+ + + D+ ++ EI+++ + H NLV L
Sbjct: 10 KIGEGSYGVVFKCR--NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
L + LV+EY + L ++ P + ++ I + + + H +
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS-ITWQTLQAVNFCH---KHNC 123
Query: 150 IHCDIKPQNILMDENRCAK 168
IH D+KP+NIL+ ++ K
Sbjct: 124 IHRDVKPENILITKHSVIK 142
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 23 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 77
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 78 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ---- 132
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 133 --IAKGMNYLEDR---RLVHRDLAARNVLV 157
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 26/148 (17%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 8 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 65
Query: 89 LLGYSLEVSKKILVYE--------YMSNGSLADILFNAEKQPNWIERTGIARDIARGILY 140
LL +K LV+E +M +L I K + +G+ +
Sbjct: 66 LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--------SYLFQLLQGLAF 117
Query: 141 LHDECETQIIHCDIKPQNILMDENRCAK 168
H +++H D+KPQN+L++ K
Sbjct: 118 CHSH---RVLHRDLKPQNLLINTEGAIK 142
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 10 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 67
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 68 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KP+N+L++ K
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIK 144
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 36 VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
+G G G V K + + VAV L++ E R+ +E V+ + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWI---------------ERT---- 128
L G + +L+ EY GSL L + K P ++ ER
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 129 ---GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A I++G+ YL E +++H D+ +NIL+ E R K
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 36 VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
+G G G V K + + VAV L++ E R+ +E V+ + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWI---------------ERT---- 128
L G + +L+ EY GSL L + K P ++ ER
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 129 ---GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A I++G+ YL E +++H D+ +NIL+ E R K
Sbjct: 151 DLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMK 190
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-----EIKVIGRTHHRNLVR 88
EK+G G+ G VYK N+ V L+K+ + E E EI ++ +H N+V+
Sbjct: 11 EKIGEGTYGVVYKAR--NKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVK 68
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE---- 144
LL +K LV+E++ + +K + TGI + + L+ +
Sbjct: 69 LLDVIHTENKLYLVFEFLHQ--------DLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 145 CETQ-IIHCDIKPQNILMDENRCAK 168
C + ++H D+KP+N+L++ K
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIK 145
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 16 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 70
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW +
Sbjct: 71 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQ---- 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 126 --IAKGMNYLEDR---RLVHRDLAARNVLV 150
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 76/196 (38%), Gaps = 33/196 (16%)
Query: 3 VKYKI----DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL- 54
V++KI + N T P Y E + F + +G G+ G V +
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 55 -----VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS 107
VAV L+ E+E +E+K++ H N+V LLG +++ EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 108 NGSLADIL---------------FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
G L + L N E+Q + + + +A+G+ +L IH
Sbjct: 134 YGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHR 190
Query: 153 DIKPQNILMDENRCAK 168
D+ +N+L+ AK
Sbjct: 191 DVAARNVLLTNGHVAK 206
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 33/163 (20%)
Query: 36 VGRGSSGTVYKGAMINRQ------LVAVNRLEKVLDERE-REFQTEIKVIGRTHHRNLVR 88
+G G G V K + + VAV L++ E R+ +E V+ + +H ++++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEK-QPNWI---------------ERT---- 128
L G + +L+ EY GSL L + K P ++ ER
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 129 ---GIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
A I++G+ YL E ++H D+ +NIL+ E R K
Sbjct: 151 DLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMK 190
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 49 MINRQLVAVNRLEKVLDE-REREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYM 106
+I Q AV +EK R R F+ E++++ + HRN++ L+ + E + LV+E M
Sbjct: 35 LITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
GS+ + + + N +E + + +D+A + +LH++ I H D+KP+NIL +
Sbjct: 94 RGGSILSHI-HKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE 145
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 24 ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRL-EKVLDEREREFQTEIKVIGRT 81
+++ I D F++ +G G+ S + ++LVA+ + +K L+ +E + EI V+ +
Sbjct: 15 DIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKI 73
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGIL 139
H N+V L L+ + +S G L D + ++ + ER + + +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVK 130
Query: 140 YLHDECETQIIHCDIKPQNIL---MDEN 164
YLHD I+H D+KP+N+L +DE+
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDED 155
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 27/151 (17%)
Query: 23 AELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIK 76
E KKI + +G G+ GTVYKG I + VA+ L E + +E E
Sbjct: 49 TEFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGI 130
V+ + ++ RLLG L S L+ + M G L D + ++ NW
Sbjct: 104 VMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------ 156
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 157 CVQIAKGMNYLEDR---RLVHRDLAARNVLV 184
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
I R + +G+ YLH +C +IIH DIKP+NILM
Sbjct: 145 IIRQVLQGLDYLHSKC--KIIHTDIKPENILM 174
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMIN-----RQLVAVNRL-EKVLDEREREFQTEIKV 77
E KKI + +G G+ GTVYKG I + VA+ L E + +E E V
Sbjct: 13 EFKKI-----KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV 67
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + ++ RLLG L S L+ + M G L D + ++ NW
Sbjct: 68 MASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------C 120
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA G+ YL D +++H D+ +N+L+
Sbjct: 121 VQIAEGMNYLEDR---RLVHRDLAARNVLV 147
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 24 ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRLEK-VLDEREREFQTEIKVIGRT 81
+++ I D F++ +G G+ S + ++LVA+ + K L+ +E + EI V+ +
Sbjct: 15 DIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGIL 139
H N+V L L+ + +S G L D + ++ + ER + + +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVK 130
Query: 140 YLHDECETQIIHCDIKPQNIL---MDEN 164
YLHD I+H D+KP+N+L +DE+
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDED 155
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 49 MINRQLVAVNRLEKVLDE-REREFQTEIKVIGRTH-HRNLVRLLGYSLEVSKKILVYEYM 106
+I Q AV +EK R R F+ E++++ + HRN++ L+ + E + LV+E M
Sbjct: 35 LITSQEYAVKIIEKQPGHIRSRVFR-EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93
Query: 107 SNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
GS+ + + + N +E + + +D+A + +LH++ I H D+KP+NIL +
Sbjct: 94 RGGSILSHI-HKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCE 145
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 24 ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRLEK-VLDEREREFQTEIKVIGRT 81
+++ I D F++ +G G+ S + ++LVA+ + K L+ +E + EI V+ +
Sbjct: 15 DIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGIL 139
H N+V L L+ + +S G L D + ++ + ER + + +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVK 130
Query: 140 YLHDECETQIIHCDIKPQNIL---MDEN 164
YLHD I+H D+KP+N+L +DE+
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDED 155
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 14/148 (9%)
Query: 24 ELKKITDGFKEKVGRGS-SGTVYKGAMINRQLVAVNRLEK-VLDEREREFQTEIKVIGRT 81
+++ I D F++ +G G+ S + ++LVA+ + K L+ +E + EI V+ +
Sbjct: 15 DIRDIYD-FRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKI 73
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGIL 139
H N+V L L+ + +S G L D + ++ + ER + + +
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIV---EKGFYTERDASRLIFQVLDAVK 130
Query: 140 YLHDECETQIIHCDIKPQNIL---MDEN 164
YLHD I+H D+KP+N+L +DE+
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDED 155
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDER-----EREFQTEIKV 77
EL+K+ + +G G+ GTVYKG I + + V + KVL E +E E V
Sbjct: 18 ELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYV 72
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWIERTGIA 131
+ + RLLG L S LV + M G L D + ++ NW
Sbjct: 73 MAGVGSPYVSRLLGICL-TSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------C 125
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
IA+G+ YL D +++H D+ +N+L+
Sbjct: 126 MQIAKGMSYLED---VRLVHRDLAARNVLV 152
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
KV ++G ++ ++ + ++ N + + ER E+K H +V L+ Y+
Sbjct: 38 KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK------HPFIVDLI-YAF 90
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLHDECETQIIH 151
+ K+ L+ EY+S G L E++ ++E T +I+ + +LH + II+
Sbjct: 91 QTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIY 144
Query: 152 CDIKPQNILMD 162
D+KP+NI+++
Sbjct: 145 RDLKPENIMLN 155
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 96
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 97 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 152
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 153 SFGICHRDIKPQNLLLDPD 171
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 84
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 85 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 140
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 141 SFGICHRDIKPQNLLLDPD 159
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 27 KITDGFKEKVGRGSSGT-VYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRN 85
KI+ K+ +G G+ GT VY+G NR + L + +RE Q + H N
Sbjct: 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQL---LRESDEHPN 79
Query: 86 LVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNW----IERTGIARDIARGILYL 141
++R ++K ++Y++ A L +Q ++ +E + + G+ +L
Sbjct: 80 VIRYF-----CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHL 134
Query: 142 HDECETQIIHCDIKPQNILM 161
H I+H D+KP NIL+
Sbjct: 135 HS---LNIVHRDLKPHNILI 151
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 16/131 (12%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
KV ++G ++ ++ + ++ N + + ER E+K H +V L+ Y+
Sbjct: 38 KVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK------HPFIVDLI-YAF 90
Query: 95 EVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI--ARDIARGILYLHDECETQIIH 151
+ K+ L+ EY+S G L E++ ++E T +I+ + +LH + II+
Sbjct: 91 QTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIY 144
Query: 152 CDIKPQNILMD 162
D+KP+NI+++
Sbjct: 145 RDLKPENIMLN 155
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 102
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 103 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 158
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 159 SFGICHRDIKPQNLLLDPD 177
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLD------EREREFQTEIKVIGRTHHRNLV 87
+K+G+G+ G V+K I+R+ V ++K+ D + +R F+ + + + H N+V
Sbjct: 15 KKLGKGAYGIVWKS--IDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIV 72
Query: 88 RLLGYSLEVSKK--ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
LL + + LV++YM A I N + + + + + + I YLH
Sbjct: 73 NLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEP---VHKQYVVYQLIKVIKYLH--- 126
Query: 146 ETQIIHCDIKPQNILMD 162
++H D+KP NIL++
Sbjct: 127 SGGLLHRDMKPSNILLN 143
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 91
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 92 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 147
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 148 SFGICHRDIKPQNLLLDPD 166
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 96 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 151
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 152 SFGICHRDIKPQNLLLDPD 170
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 95
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 96 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 151
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 152 SFGICHRDIKPQNLLLDPD 170
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 140 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 197
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 243
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
P+ E+ + + ++K+G G G V+ VAV ++ E F E
Sbjct: 4 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEAN 62
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAE--KQPNWIERTGIARD 133
V+ H LV+L +++ + I ++ E+M+ GSL D L + E KQP + +
Sbjct: 63 VMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-LPKLIDFSAQ 119
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
IA G+ ++ + IH D++ NIL+ + K
Sbjct: 120 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCK 151
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 87
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 88 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 143
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 144 SFGICHRDIKPQNLLLDPD 162
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 83 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 140
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 186
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 86 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 143
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 189
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 111
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 112 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 167
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 168 SFGICHRDIKPQNLLLDPD 186
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
P+ E+ + + ++K+G G G V+ VAV ++ E F E
Sbjct: 171 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEAN 229
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAE--KQPNWIERTGIARD 133
V+ H LV+L +++ + I ++ E+M+ GSL D L + E KQP + +
Sbjct: 230 VMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-LPKLIDFSAQ 286
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
IA G+ ++ + IH D++ NIL+ + K
Sbjct: 287 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCK 318
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 71/138 (51%), Gaps = 13/138 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-AVNRLEK--VLDERE-REFQTEIKVIGRTHHRNLV 87
F + +G+GS G V ++ AV L+K +L ++E + +E V+ + +
Sbjct: 42 FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFL 101
Query: 88 RLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDE 144
L +S + + K+ V +Y++ G L ++ +++ ++E A +IA + YLH
Sbjct: 102 VGLHFSFQTADKLYFVLDYINGGEL---FYHLQRERCFLEPRARFYAAEIASALGYLHS- 157
Query: 145 CETQIIHCDIKPQNILMD 162
I++ D+KP+NIL+D
Sbjct: 158 --LNIVYRDLKPENILLD 173
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 36 VGRGSSGTVYKGAMINRQL----VAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVRL 89
+G G G VY+G N + VAV +K LD +E+ F +E ++ H ++V+L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKL 74
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
+G +E ++ E G L L + + + I + + YL
Sbjct: 75 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INC 130
Query: 150 IHCDIKPQNILMDENRCAK 168
+H DI +NIL+ C K
Sbjct: 131 VHRDIAVRNILVASPECVK 149
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 88
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 89 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 144
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 145 SFGICHRDIKPQNLLLDPD 163
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 118 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 173
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 174 SFGICHRDIKPQNLLLDPD 192
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 117
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 118 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 173
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 174 SFGICHRDIKPQNLLLDPD 192
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 81 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 138
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMK 184
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
P+ E+ + + ++K+G G G V+ VAV ++ E F E
Sbjct: 177 PWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEAN 235
Query: 77 VIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAE--KQPNWIERTGIARD 133
V+ H LV+L +++ + I ++ E+M+ GSL D L + E KQP + +
Sbjct: 236 VMKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQP-LPKLIDFSAQ 292
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
IA G+ ++ + IH D++ NIL+ + K
Sbjct: 293 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCK 324
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 36 VGRGSSGTVYKGAMINR----QLVAVNRLEKV-LDERER-EFQTEIKVIGRTHHRNLVRL 89
+G+GS G V+ + R L A+ L+K L R+R + E ++ +H +V+L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 90 LGYSLEVSKKI-LVYEYMSNGSL-----ADILFNAEKQPNWIERTGIARDIARGILYLHD 143
Y+ + K+ L+ +++ G L +++F E ++ ++A G+ +LH
Sbjct: 96 -HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA------ELALGLDHLH- 147
Query: 144 ECETQIIHCDIKPQNILMDE 163
II+ D+KP+NIL+DE
Sbjct: 148 --SLGIIYRDLKPENILLDE 165
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 119
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 120 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 175
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 176 SFGICHRDIKPQNLLLDPD 194
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 36 VGRGSSGTVYKGAMINRQL----VAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVRL 89
+G G G VY+G N + VAV +K LD +E+ F +E ++ H ++V+L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKL 78
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
+G +E ++ E G L L + + + I + + YL
Sbjct: 79 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INC 134
Query: 150 IHCDIKPQNILMDENRCAK 168
+H DI +NIL+ C K
Sbjct: 135 VHRDIAVRNILVASPECVK 153
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 121
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 122 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 177
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 178 SFGICHRDIKPQNLLLDPD 196
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 11/139 (7%)
Query: 36 VGRGSSGTVYKGAMINRQL----VAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVRL 89
+G G G VY+G N + VAV +K LD +E+ F +E ++ H ++V+L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEK-FMSEAVIMKNLDHPHIVKL 90
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQI 149
+G +E ++ E G L L + + + I + + YL
Sbjct: 91 IGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INC 146
Query: 150 IHCDIKPQNILMDENRCAK 168
+H DI +NIL+ C K
Sbjct: 147 VHRDIAVRNILVASPECVK 165
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ +KVL ++ R E++++ + H N+VRL Y
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAI---KKVLQDK-RFKNRELQIMRKLDHCNIVRLRYFFY 162
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 163 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 218
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 219 SFGICHRDIKPQNLLLDPD 237
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRT 81
K +D + KE++G+G+ V + L ++ R+FQ E ++ +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H N+VRL E S LV++ ++ G L + + E + + + I I Y
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYC 120
Query: 142 HDECETQIIHCDIKPQNILM 161
H I+H ++KP+N+L+
Sbjct: 121 H---SNGIVHRNLKPENLLL 137
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARD 133
E+ V+ + H N+++L + + LV E G L D + +K ++ I +
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAAVIMKQ 112
Query: 134 IARGILYLHDECETQIIHCDIKPQNILMD 162
+ G YLH + I+H D+KP+N+L++
Sbjct: 113 VLSGTTYLH---KHNIVHRDLKPENLLLE 138
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRT 81
K +D + KE++G+G+ V + L ++ R+FQ E ++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H N+VRL E S LV++ ++ G L + + E + + + I I Y
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYC 121
Query: 142 HDECETQIIHCDIKPQNILM 161
H I+H ++KP+N+L+
Sbjct: 122 H---SNGIVHRNLKPENLLL 138
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 31/194 (15%)
Query: 3 VKYKI----DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL- 54
V++KI + N T P Y E + F + +G G+ G V +
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 55 -----VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS 107
VAV L+ E+E +E+K++ H N+V LLG +++ EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 108 NGSLADILFNA----EKQPNW--IERTGIARD-------IARGILYLHDECETQIIHCDI 154
G L + L E P + T RD +A+G+ +L + IH D+
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDV 190
Query: 155 KPQNILMDENRCAK 168
+N+L+ AK
Sbjct: 191 AARNVLLTNGHVAK 204
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRT 81
K +D + KE++G+G+ V + L ++ R+FQ E ++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
H N+VRL E S LV++ ++ G L + + E + + + I I Y
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSE-ADASHCIQQILESIAYC 121
Query: 142 HDECETQIIHCDIKPQNILM 161
H I+H ++KP+N+L+
Sbjct: 122 H---SNGIVHRNLKPENLLL 138
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNL 86
+K+G G+ G V + +L R K++ + + E+ V+ + H N+
Sbjct: 27 KKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 83
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
++L + + LV E G L D + +K ++ I + + G YLH +
Sbjct: 84 MKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSE-VDAAVIMKQVLSGTTYLH---K 139
Query: 147 TQIIHCDIKPQNILMD 162
I+H D+KP+N+L++
Sbjct: 140 HNIVHRDLKPENLLLE 155
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + + +G+ YLH +C +IIH DIKP+NIL+ N
Sbjct: 135 IIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 167
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ ++ + + RE Q ++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL--LGY 92
+G GS G VY+ + + +LVA+ ++ + + RE Q ++ + H N+VRL Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFFY 83
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA-------RDIARGILYLHDEC 145
S KK VY + + + ++ + + ++T + R + Y+H
Sbjct: 84 S-SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH--- 139
Query: 146 ETQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 140 SFGICHRDIKPQNLLLDPD 158
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 2/35 (5%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + + +G+ YLH +C +IIH DIKP+NIL+ N
Sbjct: 151 IIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVN 183
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRL- 89
E +G G+ G V + Q VA+ ++ D +T E+K++ H N++ +
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 119
Query: 90 --LGYSLEVS--KKILVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLHDE 144
L ++ K + V + L I+ ++ QP +E + RG+ Y+H
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS- 176
Query: 145 CETQIIHCDIKPQNILMDEN 164
Q+IH D+KP N+L++EN
Sbjct: 177 --AQVIHRDLKPSNLLVNEN 194
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 21/155 (13%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLE---KVLDEREREFQTEIKVIGR- 80
+ TDG+ KE +G GS ++ R + E K++D+ +R+ EI+++ R
Sbjct: 19 QFTDGYEVKEDIGVGSY------SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRY 72
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIER--TGIARDIARGI 138
H N++ L + +V E G L D + +Q + ER + + I + +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKIL---RQKFFSEREASAVLFTITKTV 129
Query: 139 LYLHDECETQIIHCDIKPQNIL-MDENRCAKNFRL 172
YLH + ++H D+KP NIL +DE+ ++ R+
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
+G GS G VY+ + + +LVA+ ++ + + RE Q ++ + H N+VRL +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQ----IMRKLDHCNIVRLRYFFY 83
Query: 95 EVSKK--------ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
+K +L Y + +A A++ I + R + Y+H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---S 140
Query: 147 TQIIHCDIKPQNILMDEN 164
I H DIKPQN+L+D +
Sbjct: 141 FGICHRDIKPQNLLLDPD 158
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + L+ EY S G + D L + R+ R
Sbjct: 64 EVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-R 121
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + +I+H D+K +N+L+D +
Sbjct: 122 QIVSAVQYCH---QKRIVHRDLKAENLLLDAD 150
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 10/134 (7%)
Query: 32 FKEKVGRGSSGTV-YKGAMINRQLVAVNRLEK--VLDEREREFQTEIKVIGRTHHRNLVR 88
F + +G G+ G + ++LVAV +E+ +DE Q EI H N+VR
Sbjct: 24 FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN---VQREIINHRSLRHPNIVR 80
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
L + ++ EY S G L + + NA + + E + + G+ Y H Q
Sbjct: 81 FKEVILTPTHLAIIMEYASGGELYERICNAGRF-SEDEARFFFQQLLSGVSYCH---SMQ 136
Query: 149 IIHCDIKPQNILMD 162
I H D+K +N L+D
Sbjct: 137 ICHRDLKLENTLLD 150
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + L+ EY S G + D L + R+ R
Sbjct: 61 EVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF-R 118
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + +I+H D+K +N+L+D +
Sbjct: 119 QIVSAVQYCH---QKRIVHRDLKAENLLLDAD 147
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 36 VGRGSSGTV----YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRG+ G V +K + + +++ E + F E ++ + +V+L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFC 142
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ +V EYM G L +++ N + W + A +L L +IH
Sbjct: 143 AFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFY-----TAEVVLALDAIHSMGLIH 197
Query: 152 CDIKPQNILMDEN 164
D+KP N+L+D++
Sbjct: 198 RDVKPDNMLLDKH 210
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 20/105 (19%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ EY S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
+Q + + +ARG+ YL + + IH D+ +N+L+ EN
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTEN 193
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 14/140 (10%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVRL- 89
E +G G+ G V + Q VA+ ++ D +T E+K++ H N++ +
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIK 120
Query: 90 --LGYSLEVS--KKILVYEYMSNGSLADILFNAEKQPNWIERTG-IARDIARGILYLHDE 144
L ++ K + V + L I+ ++ QP +E + RG+ Y+H
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHS- 177
Query: 145 CETQIIHCDIKPQNILMDEN 164
Q+IH D+KP N+L++EN
Sbjct: 178 --AQVIHRDLKPSNLLVNEN 195
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 27 KITDGF--KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQT---EIKVIGRT 81
K +D + KE++G+G+ V + L ++ R+FQ E ++ +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 85
Query: 82 HHRNLVRLLGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILY 140
H N+VRL E S LV++ ++ G L DI+ A + + + + + I I Y
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILESIAY 143
Query: 141 LHDECETQIIHCDIKPQNILM 161
H I+H ++KP+N+L+
Sbjct: 144 CH---SNGIVHRNLKPENLLL 161
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 63/129 (48%), Gaps = 8/129 (6%)
Query: 35 KVGRGSSGTV--YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
K+G GS+G V + RQ VAV ++ +R E+ ++ H N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQ-VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
L + ++ E++ G+L DI+ ++ + N + + + + + YLH + +IH
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHR 165
Query: 153 DIKPQNILM 161
DIK +IL+
Sbjct: 166 DIKSDSILL 174
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E++++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 64 EVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLV-AHGRMKEKEARAKFR 121
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMD 162
I + Y H + I+H D+K +N+L+D
Sbjct: 122 QIVSAVQYCH---QKYIVHRDLKAENLLLD 148
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 18/140 (12%)
Query: 34 EKVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLV 87
E +G+G+ V + G ++V V + + + E + H ++V
Sbjct: 30 EVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN--WIERTGIARDIARGIL----YL 141
LL +V+E+M AD+ F K+ + ++ +A R IL Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 142 HDECETQIIHCDIKPQNILM 161
HD IIH D+KP+N+L+
Sbjct: 147 HD---NNIIHRDVKPENVLL 163
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 33 KEKVGRGS-SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
K KVG+ +G ++NRQ + R V+ + RE Q + H ++++L
Sbjct: 31 KVKVGKHELTGHKVAVKILNRQKI---RSLDVVGKIRREIQN----LKLFRHPHIIKLYQ 83
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
S +V EY+S G L D + + + E + + I G+ Y H ++H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRL-DEKESRRLFQQILSGVDYCH---RHMVVH 139
Query: 152 CDIKPQNILMDENRCAK 168
D+KP+N+L+D + AK
Sbjct: 140 RDLKPENVLLDAHMNAK 156
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 35 KVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHH-------- 83
K+G G TV+ M+N VA+ R +KV E + EIK++ R +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED---EIKLLQRVNDADNTKEDS 82
Query: 84 ---RNLVRLLGYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR 136
++++LL + ++V+E + LA I + I I++ +
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 137 GILYLHDECETQIIHCDIKPQNILMD 162
G+ Y+H C IIH DIKP+N+LM+
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLME 166
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 23/146 (15%)
Query: 35 KVGRGSSGTVYKGA-MINRQLVAVN--RLEKVLDEREREFQTEIKVIGRTHH-------- 83
K+G G TV+ M+N VA+ R +KV E + EIK++ R +
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED---EIKLLQRVNDADNTKEDS 82
Query: 84 ---RNLVRLLGYSLEVSKK----ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIAR 136
++++LL + ++V+E + LA I + I I++ +
Sbjct: 83 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 142
Query: 137 GILYLHDECETQIIHCDIKPQNILMD 162
G+ Y+H C IIH DIKP+N+LM+
Sbjct: 143 GLDYMHRRC--GIIHTDIKPENVLME 166
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ GTVYK G + + V V E+ L ++ + H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 LLGYSLEVS-----KKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYL 141
L+ K LV+E++ + P T + R RG+ +L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H C I+H D+KP+NIL+ K
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVK 152
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 73 TEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGI 130
+E+ ++ H N+VR ++ + L V EY G LA ++ K+ +++ +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 131 ARDIARGILYLHDECETQ------IIHCDIKPQNILMD 162
R + + L L EC + ++H D+KP N+ +D
Sbjct: 114 LRVMTQLTLALK-ECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWI---ERTG 129
E++++ +H N+V+L +E K + LV EY S G + D L W+ E
Sbjct: 56 EVRIMKVLNHPNIVKLFE-VIETEKTLYLVMEYASGGEVFDYLVAH----GWMKEKEARA 110
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
R I + Y H + I+H D+K +N+L+D +
Sbjct: 111 KFRQIVSAVQYCHQKF---IVHRDLKAENLLLDAD 142
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
E+++ +H N+V+L +E K + LV EY S G + D L A + E R
Sbjct: 63 EVRIXKVLNHPNIVKLFE-VIETEKTLYLVXEYASGGEVFDYLV-AHGRXKEKEARAKFR 120
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + Y H + I+H D+K +N+L+D +
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDAD 149
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 73 TEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGI 130
+E+ ++ H N+VR ++ + L V EY G LA ++ K+ +++ +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 131 ARDIARGILYLHDECETQ------IIHCDIKPQNILMD 162
R + + L L EC + ++H D+KP N+ +D
Sbjct: 114 LRVMTQLTLALK-ECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ GTVYK G + + V V E+ L ++ + H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 LLGYSLEVS-----KKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYL 141
L+ K LV+E++ + P T + R RG+ +L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H C I+H D+KP+NIL+ K
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVK 152
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 18/147 (12%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
++G G+ GTVYK G + + V V E+ L ++ + H N+VR
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVR 70
Query: 89 LLGYSLEVS-----KKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGILYL 141
L+ K LV+E++ + P T + R RG+ +L
Sbjct: 71 LMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 142 HDECETQIIHCDIKPQNILMDENRCAK 168
H C I+H D+KP+NIL+ K
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVK 152
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 73 TEIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGI 130
+E+ ++ H N+VR ++ + L V EY G LA ++ K+ +++ +
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 131 ARDIARGILYLHDECETQ------IIHCDIKPQNILMD 162
R + + L L EC + ++H D+KP N+ +D
Sbjct: 114 LRVMTQLTLALK-ECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 36.6 bits (83), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 14/72 (19%)
Query: 96 VSKKILVYEYMSNGSLADILFNAEKQPNWIERTG------IARDIARGILYLHDECETQI 149
S+ IL+ EY + G + + P E + + I G+ YLH + I
Sbjct: 101 TSEIILILEYAAGGEIFSLCL-----PELAEMVSENDVIRLIKQILEGVYYLH---QNNI 152
Query: 150 IHCDIKPQNILM 161
+H D+KPQNIL+
Sbjct: 153 VHLDLKPQNILL 164
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 31/194 (15%)
Query: 3 VKYKI----DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL- 54
V++KI + N T P Y E + F + +G G+ G V +
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 55 -----VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS 107
VAV L+ E+E +E+K++ H N+V LLG +++ EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 108 NGSLADILFNA----EKQPNW--IERTGIARD-------IARGILYLHDECETQIIHCDI 154
G L + L E P + T RD +A+G+ +L + IH D+
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDV 190
Query: 155 KPQNILMDENRCAK 168
+N+L+ AK
Sbjct: 191 AARNVLLTNGHVAK 204
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 25/140 (17%)
Query: 36 VGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLE 95
+G GS G V++ ++ VA+ +KVL ++ R E++++ H N+V L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAI---KKVLQDK-RFKNRELQIMRIVKHPNVVDLKAFFYS 103
Query: 96 VSKKI------LVYEYMSNGSLADILFNAEKQPNWIERTG-------IARDIARGILYLH 142
K LV EY+ + ++ A + +++T + R + Y+H
Sbjct: 104 NGDKKDEVFLNLVLEYV-----PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH 158
Query: 143 DECETQIIHCDIKPQNILMD 162
I H DIKPQN+L+D
Sbjct: 159 S---IGICHRDIKPQNLLLD 175
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 41/149 (27%)
Query: 36 VGRGSSGTVYKG------------------AMINRQLVAVNRLEKVLDEREREFQTEI-- 75
+G+GS G V K A +N+ + V RL +++++ + E + I
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEMKYYIVH 120
Query: 76 ---KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
+ R H + +L Y+L Y+ + N + + N ++ A+
Sbjct: 121 LKRHFMFRNHLCLVFEMLSYNL--------YDLLRNTNFRGVSLNLTRK--------FAQ 164
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILM 161
+ +L+L E IIHCD+KP+NIL+
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILL 192
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ Y S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 41/149 (27%)
Query: 36 VGRGSSGTVYKG------------------AMINRQLVAVNRLEKVLDEREREFQTEI-- 75
+G+GS G V K A +N+ + V RL +++++ + E + I
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEMKYYIVH 120
Query: 76 ---KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
+ R H + +L Y+L Y+ + N + + N ++ A+
Sbjct: 121 LKRHFMFRNHLCLVFEMLSYNL--------YDLLRNTNFRGVSLNLTRK--------FAQ 164
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILM 161
+ +L+L E IIHCD+KP+NIL+
Sbjct: 165 QMCTALLFLATP-ELSIIHCDLKPENILL 192
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 41/149 (27%)
Query: 36 VGRGSSGTVYKG------------------AMINRQLVAVNRLEKVLDEREREFQTEI-- 75
+G+GS G V K A +N+ + V RL +++++ + E + I
Sbjct: 43 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEV-RLLELMNKHDTEMKYYIVH 101
Query: 76 ---KVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
+ R H + +L Y+L Y+ + N + + N ++ A+
Sbjct: 102 LKRHFMFRNHLCLVFEMLSYNL--------YDLLRNTNFRGVSLNLTRK--------FAQ 145
Query: 133 DIARGILYLHDECETQIIHCDIKPQNILM 161
+ +L+L E IIHCD+KP+NIL+
Sbjct: 146 QMCTALLFLATP-ELSIIHCDLKPENILL 173
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 15/157 (9%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIK 76
PF ++IT E VG+G G V++G+ VAV ++ DE+ +TE+
Sbjct: 28 PFLVQRTVARQIT--LLECVGKGRYGEVWRGSWQGEN-VAV-KIFSSRDEKSWFRETELY 83
Query: 77 VIGRTHHRNLVRLLGYSL----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
H N++ + + ++ L+ Y GSL D L + + I
Sbjct: 84 NTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVL 141
Query: 133 DIARGILYLHDEC-----ETQIIHCDIKPQNILMDEN 164
IA G+ +LH E + I H D+K +NIL+ +N
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 178
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 36 VGRGSSGTV----YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRG+ G V +K + +++ E + F E ++ + +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 140
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
Y+ + + + +V EYM G L +++ N + W A +L L I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFI 195
Query: 151 HCDIKPQNILMDEN 164
H D+KP N+L+D++
Sbjct: 196 HRDVKPDNMLLDKS 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 35 KVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQT--EIKVIGRTH---HRNLV 87
++G G+ G V+K + + VA+ R+ E T E+ V+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 88 RLLGYSL-----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA----RGI 138
RL +K LV+E++ D+ +K P T +D+ RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 139 LYLHDECETQIIHCDIKPQNILM 161
+LH +++H D+KPQNIL+
Sbjct: 134 DFLHSH---RVVHRDLKPQNILV 153
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 36 VGRGSSGTV----YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRG+ G V +K + +++ E + F E ++ + +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 140
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
Y+ + + + +V EYM G L +++ N + W A +L L I
Sbjct: 141 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFI 195
Query: 151 HCDIKPQNILMDEN 164
H D+KP N+L+D++
Sbjct: 196 HRDVKPDNMLLDKS 209
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 36 VGRGSSGTV----YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+GRG+ G V +K + +++ E + F E ++ + +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF- 135
Query: 92 YSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
Y+ + + + +V EYM G L +++ N + W A +L L I
Sbjct: 136 YAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFY-----TAEVVLALDAIHSMGFI 190
Query: 151 HCDIKPQNILMDEN 164
H D+KP N+L+D++
Sbjct: 191 HRDVKPDNMLLDKS 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 35 KVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQT--EIKVIGRTH---HRNLV 87
++G G+ G V+K + + VA+ R+ E T E+ V+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 88 RLLGYSL-----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIA----RGI 138
RL +K LV+E++ D+ +K P T +D+ RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 139 LYLHDECETQIIHCDIKPQNILM 161
+LH +++H D+KPQNIL+
Sbjct: 134 DFLHSH---RVVHRDLKPQNILV 153
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 35 KVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQT--EIKVIGRTH---HRNLV 87
++G G+ G V+K + + VA+ R+ E T E+ V+ H N+V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 88 RLLGYSL-----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARD----IARGI 138
RL +K LV+E++ D+ +K P T +D + RG+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHVDQ----DLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133
Query: 139 LYLHDECETQIIHCDIKPQNILM 161
+LH +++H D+KPQNIL+
Sbjct: 134 DFLHSH---RVVHRDLKPQNILV 153
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 27 KITDGF--KEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR 80
K+ D + K +GRGS G VY K A N + VNR+ + L + +R + EI ++ R
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNR 83
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYM------SNGSLADILFNAEKQPNWIERT---GIA 131
++RL + L + + +L ++ + ++ L + K P ++ I
Sbjct: 84 LKSDYIIRL--HDLIIPEDLLKFDELYIVLEIADSDLKKLF----KTPIFLTEQHVKTIL 137
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
++ G ++H E+ IIH D+KP N L++++ K
Sbjct: 138 YNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVK 171
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKIL--VYEYMSNGSLADILFNAEKQPNWIERTGIA 131
EI ++ + H N+V+L+ + ++ L V+E ++ G + ++ K + +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV--PTLKPLSEDQARFYF 143
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
+D+ +GI YLH + +IIH DIKP N+L+ E+
Sbjct: 144 QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGED 173
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-------REFQTEIKVIGRTHHRNL 86
+ +G G+ G V G QL K+L+ ++ + + EI+ + H ++
Sbjct: 17 DTLGVGTFGKVKIG---EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
++L + +V EY+S G L D + + +E AR + + IL D C
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEME-ARRLFQQILSAVDYCH 128
Query: 147 TQ-IIHCDIKPQNILMDENRCAK 168
++H D+KP+N+L+D + AK
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAK 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERE-------REFQTEIKVIGRTHHRNL 86
+ +G G+ G V G QL K+L+ ++ + + EI+ + H ++
Sbjct: 17 DTLGVGTFGKVKIG---EHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECE 146
++L + +V EY+S G L D + + +E AR + + IL D C
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR----VEEME-ARRLFQQILSAVDYCH 128
Query: 147 TQ-IIHCDIKPQNILMDENRCAK 168
++H D+KP+N+L+D + AK
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAK 151
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 76/191 (39%), Gaps = 29/191 (15%)
Query: 3 VKYKI----DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL- 54
V++KI + N T P Y E + F + +G G+ G V +
Sbjct: 6 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 65
Query: 55 -----VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS 107
VAV L+ E+E +E+K++ H N+V LLG +++ EY
Sbjct: 66 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 108 NGSLADILFNAEKQPNWIERTG----------IARDIARGILYLHDECETQIIHCDIKPQ 157
G L + L + + + + G + +A+G+ +L + IH D+ +
Sbjct: 126 YGDLLNFL-RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 181
Query: 158 NILMDENRCAK 168
N+L+ AK
Sbjct: 182 NVLLTNGHVAK 192
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 32 FKEKVGRGS-SGTVYKGAMINRQLVAVNRLEK--VLDEREREFQT-EIKVIGRTHHRNLV 87
F + +G GS S TV + + A+ LEK ++ E + + T E V+ R H V
Sbjct: 34 FGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFV 93
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
+L + K Y NG L + R A +I + YLH +
Sbjct: 94 KLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGK--- 149
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP+NIL++E+
Sbjct: 150 GIIHRDLKPENILLNED 166
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 35.8 bits (81), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 59/150 (39%), Gaps = 21/150 (14%)
Query: 35 KVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH---HRN 85
++G G+ GTVYK G + + V V E+ ++ R H N
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 86 LVRLLGYSLEVS-----KKILVYEYMSNGSLADILFNAEKQPNWIERT--GIARDIARGI 138
+VRL+ K LV+E++ + P T + R RG+
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPPGLPAETIKDLMRQFLRGL 133
Query: 139 LYLHDECETQIIHCDIKPQNILMDENRCAK 168
+LH C I+H D+KP+NIL+ K
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVK 160
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 29/191 (15%)
Query: 3 VKYKI----DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL- 54
V++KI + N T P Y E + F + +G G+ G V +
Sbjct: 14 VRWKIIESYEGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKE 73
Query: 55 -----VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMS 107
VAV L+ E+E +E+K++ H N+V LLG +++ EY
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 108 NGSLADILFNAEKQPNWIERTG----------IARDIARGILYLHDECETQIIHCDIKPQ 157
G L + L + + + + G + +A+G+ +L IH D+ +
Sbjct: 134 YGDLLNFL-RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAAR 189
Query: 158 NILMDENRCAK 168
N+L+ AK
Sbjct: 190 NVLLTNGHVAK 200
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 16 PYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR 75
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIER 127
+E+K+ I HH N+V LLG + ++V E+ G+L+ L K+ ++
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPY 133
Query: 128 TGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 134 KDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVK 184
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 20/109 (18%)
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLA---------------DILFNAE 119
+K+IG+ H+N++ LLG + ++ Y S G+L DI E
Sbjct: 94 MKMIGK--HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPE 151
Query: 120 KQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+Q + + +ARG+ YL + + IH D+ +N+L+ EN K
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMK 197
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGRT-HH 83
F + +G G+ G V + VAV L+ ERE +E+KV+ +H
Sbjct: 27 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 86
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI-----------E 126
N+V LLG +++ EY G L + L F K I +
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +A+G+ +L + IH D+ +NIL+ R K
Sbjct: 147 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 185
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 33 KEKVGRGSSGTVYKGAMI-NRQLVAVNRLEKVL---DEREREFQTEIKVIGRTHHRNLVR 88
+E +G GS G V +Q VA+ + + L + + EI + H ++++
Sbjct: 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 89 LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
L + ++V EY + G L D + +K+ E + I I Y H +
Sbjct: 74 LYDVITTPTDIVMVIEY-AGGELFDYIVE-KKRMTEDEGRRFFQQIICAIEYCH---RHK 128
Query: 149 IIHCDIKPQNILMDENRCAK 168
I+H D+KP+N+L+D+N K
Sbjct: 129 IVHRDLKPENLLLDDNLNVK 148
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V + L +AV +L + + E++++ H N++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 173
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 174 DIIHRDLKPSNLAVNED 190
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.4 bits (80), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 2 PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLV 55
P + +D + L P+ S E + + +GRG+ G V + + V
Sbjct: 4 PDELPLDEHCERL--PYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTV 61
Query: 56 AVNRL-EKVLDEREREFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLA 112
AV L E R +E+K+ I HH N+V LLG + ++V E+ G+L+
Sbjct: 62 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 121
Query: 113 DIL------FNAEKQPNWIERTGIARD--------IARGILYLHDECETQIIHCDIKPQN 158
L F K P + + + + +A+G+ +L + IH D+ +N
Sbjct: 122 TYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARN 178
Query: 159 ILMDENRCAK 168
IL+ E K
Sbjct: 179 ILLSEKNVVK 188
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 21/142 (14%)
Query: 34 EKVGRGSSG--TVYKGAMINRQLV--AVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL 89
+K+G GS G + K RQ V +N ERE E + E+ V+ H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKERE-ESRREVAVLANMKHPNIVQY 88
Query: 90 LGYSLEVSKKILVYEYMSNGSL-------ADILFNAEKQPNWIERTGIARDIARGILYLH 142
E +V +Y G L +LF ++ +W + +A + ++H
Sbjct: 89 RESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA------LKHVH 142
Query: 143 DECETQIIHCDIKPQNILMDEN 164
D +I+H DIK QNI + ++
Sbjct: 143 DR---KILHRDIKSQNIFLTKD 161
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGRT-HH 83
F + +G G+ G V + VAV L+ ERE +E+KV+ +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI-----------E 126
N+V LLG +++ EY G L + L F K I +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +A+G+ +L + IH D+ +NIL+ R K
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 208
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 33 KEKVGRGSSGTV-----------YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR- 80
KE +GRG S V Y +I+ E+V + RE + E+ ++ +
Sbjct: 9 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKV 67
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIAR 136
+ H N+++L + LV++ M G L D L +EK E I R +
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK-----ETRKIMRALLE 122
Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
I LH + I+H D+KP+NIL+D++
Sbjct: 123 VICALH---KLNIVHRDLKPENILLDDD 147
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 27/174 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 16 PYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR 75
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIER 127
+E+K+ I HH N+V LLG + ++V E+ G+L+ L K+ ++
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPY 133
Query: 128 TGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 134 KDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVK 184
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 34 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 149 K---GIIHRDLKPENILLNED 166
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGRT-HH 83
F + +G G+ G V + VAV L+ ERE +E+KV+ +H
Sbjct: 50 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 109
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI-----------E 126
N+V LLG +++ EY G L + L F K I +
Sbjct: 110 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 169
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +A+G+ +L + IH D+ +NIL+ R K
Sbjct: 170 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 34 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 149 K---GIIHRDLKPENILLNED 166
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 K---GIIHRDLKPENILLNED 168
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGRT-HH 83
F + +G G+ G V + VAV L+ ERE +E+KV+ +H
Sbjct: 45 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 104
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI-----------E 126
N+V LLG +++ EY G L + L F K I +
Sbjct: 105 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 164
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +A+G+ +L + IH D+ +NIL+ R K
Sbjct: 165 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 203
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 12 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 126
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 127 K---GIIHRDLKPENILLNED 144
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 35.4 bits (80), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 33 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 148 K---GIIHRDLKPENILLNED 165
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 11 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 125
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 126 K---GIIHRDLKPENILLNED 143
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 13 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 127
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 128 K---GIIHRDLKPENILLNED 145
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 K---GIIHRDLKPENILLNED 168
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 37 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 152 K---GIIHRDLKPENILLNED 169
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 K---GIIHRDLKPENILLNED 168
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 28/162 (17%)
Query: 32 FKEKVGRGSSGTVYKGAMIN------RQLVAVNRLEKVLDERERE-FQTEIKVIGRT-HH 83
F + +G G+ G V + VAV L+ ERE +E+KV+ +H
Sbjct: 43 FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNH 102
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADIL------FNAEKQPNWI-----------E 126
N+V LLG +++ EY G L + L F K I +
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 127 RTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +A+G+ +L + IH D+ +NIL+ R K
Sbjct: 163 LLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITK 201
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 18 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 132
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 133 K---GIIHRDLKPENILLNED 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 33 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 147
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 148 K---GIIHRDLKPENILLNED 165
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 K---GIIHRDLKPENILLNED 168
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 K---GIIHRDLKPENILLNED 168
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 37 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 151
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 152 K---GIIHRDLKPENILLNED 169
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 34 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 148
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 149 K---GIIHRDLKPENILLNED 166
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 17/139 (12%)
Query: 36 VGRGSSGTV---YKGAMINRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL 90
VG G+ G+V Y + RQ VAV +L + R E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 91 -----GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
S+E ++ + + L +I+ + ++ + + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF--LVYQLLRGLKYIHS-- 149
Query: 146 ETQIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 -AGIIHRDLKPSNVAVNED 167
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 36 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 150
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 151 KG---IIHRDLKPENILLNED 168
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 14 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 128
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 129 K---GIIHRDLKPENILLNED 146
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 33 KEKVGRGSSGTV-----------YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR- 80
KE +GRG S V Y +I+ E+V + RE + E+ ++ +
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKV 80
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIAR 136
+ H N+++L + LV++ M G L D L +EK E I R +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK-----ETRKIMRALLE 135
Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
I LH + I+H D+KP+NIL+D++
Sbjct: 136 VICALH---KLNIVHRDLKPENILLDDD 160
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 39 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 153
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 154 K---GIIHRDLKPENILLNED 171
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 29/165 (17%)
Query: 34 EKVGRGSSGTVYKGAMINR--QLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRL-- 89
+ +G G +G V+ A+ N + VA+ ++ + + EIK+I R H N+V++
Sbjct: 17 KPLGCGGNGLVFS-AVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFE 75
Query: 90 ------------LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGI-ARDIAR 136
+G E++ +V EYM LA++L E+ P E + + R
Sbjct: 76 ILGPSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL---EQGPLLEEHARLFMYQLLR 131
Query: 137 GILYLHDECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEAR 181
G+ Y+H ++H D+KP N+ ++ ++ L IG AR
Sbjct: 132 GLKYIH---SANVLHRDLKPANLFIN----TEDLVLKIGDFGLAR 169
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L K + E++++ H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 156
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 157 DIIHRDLKPSNLAVNED 173
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLV-----AVNRLEK--VLDEREREFQT-EIKVIGRTHH 83
F + +G GS TV ++ R+L A+ LEK ++ E + + T E V+ R H
Sbjct: 41 FGKILGEGSFSTV----VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
V+L + K Y NG L + R A +I + YLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHG 155
Query: 144 ECETQIIHCDIKPQNILMDEN 164
+ IIH D+KP+NIL++E+
Sbjct: 156 K---GIIHRDLKPENILLNED 173
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 51 NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS 110
+ Q AV + K ++ ++ T +K+ H N+V+L + LV E ++ G
Sbjct: 35 SNQAFAVKIISKRMEANTQKEITALKLC--EGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM-DEN 164
L + + +K + E + I R + + ++HD ++H D+KP+N+L DEN
Sbjct: 93 LFERI-KKKKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDEN 143
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 35.0 bits (79), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 33 KEKVGRGSSGTV-----------YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGR- 80
KE +GRG S V Y +I+ E+V + RE + E+ ++ +
Sbjct: 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK-EVDILRKV 80
Query: 81 THHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFN----AEKQPNWIERTGIARDIAR 136
+ H N+++L + LV++ M G L D L +EK E I R +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEK-----ETRKIMRALLE 135
Query: 137 GILYLHDECETQIIHCDIKPQNILMDEN 164
I LH + I+H D+KP+NIL+D++
Sbjct: 136 VICALH---KLNIVHRDLKPENILLDDD 160
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 50/180 (27%)
Query: 32 FKEKVGRGSSGTVYKGAMINR-------QLVAVNRLEKVLDEREREFQTEIKVIGRTHHR 84
K +G+GS G V + A+ N+ +++ N++ ++ + +TE++++ + HH
Sbjct: 30 LKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHP 88
Query: 85 NLVRLLGYSLEVSKKILVYEYMSNGSLADIL-------------------------FNAE 119
N+ RL + LV E G L D L N E
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE 148
Query: 120 ----------KQPNWIER----TGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
+ ++++R + I R I + YLH++ I H DIKP+N L N+
Sbjct: 149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNK 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 34.7 bits (78), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 18 FSFSYAELKKITDGFKEKVGRGSSGTVYKGAMINR---QLVAVNRLEKVLDERE-REFQT 73
+ F+ +LK + + +GRG+ G+V K M+++ Q++AV R+ +DE+E ++
Sbjct: 17 WDFTAEDLKDLGE-----IGRGAYGSVNK--MVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69
Query: 74 EIKVIGRTHH-RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIAR 132
++ V+ R+ +V+ G + E MS + + I + +
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK 129
Query: 133 DIARGILYL-HDECETQIIHCDIKPQNILMDEN 164
+ L H + +IIH DIKP NIL+D +
Sbjct: 130 ITLATVKALNHLKENLKIIHRDIKPSNILLDRS 162
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
E VG+G G V++G+ VAV ++ DE+ +TE+ H N++ +
Sbjct: 14 ECVGKGRYGEVWRGSWQGEN-VAV-KIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 94 L----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC---- 145
+ ++ L+ Y GSL D L + + I IA G+ +LH E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 146 -ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 130 GKPAIAHRDLKSKNILVKKN 149
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 13/140 (9%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
E VG+G G V++G+ VAV ++ DE+ +TE+ H N++ +
Sbjct: 14 ECVGKGRYGEVWRGSWQGEN-VAV-KIFSSRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 94 L----EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC---- 145
+ ++ L+ Y GSL D L + + I IA G+ +LH E
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL--QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQ 129
Query: 146 -ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 130 GKPAIAHRDLKSKNILVKKN 149
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ A+ + ++ + I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQ--FLIYQILRGLKYIH---SA 140
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 141 DIIHRDLKPSNLAVNED 157
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.7 bits (78), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 33 KEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVR 88
K +GRGS G VY K N + VNR+ + L + +R + EI ++ R ++R
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIR 89
Query: 89 LLGYSLEVSKKILVYEYM------SNGSLADILFNAEKQPNWIERTGIARDIARGIL--- 139
L Y L + +L ++ + ++ L + K P ++ I + +L
Sbjct: 90 L--YDLIIPDDLLKFDELYIVLEIADSDLKKLF----KTPIFLTEEHIKTILYNLLLGEN 143
Query: 140 YLHDECETQIIHCDIKPQNILMDENRCAK 168
++H E+ IIH D+KP N L++++ K
Sbjct: 144 FIH---ESGIIHRDLKPANCLLNQDCSVK 169
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 36 VGRGSSGTV---YKGAMINRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL 90
VG G+ G+V Y + RQ VAV +L + R E++++ H N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 91 -----GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
S+E ++ + + L +I+ ++ + + RG+ Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ--FLVYQLLRGLKYIHS-- 141
Query: 146 ETQIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 142 -AGIIHRDLKPSNVAVNED 159
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 149
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 DIIHRDLKPSNLAVNED 166
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 140
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 141 DIIHRDLKPSNLAVNED 157
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 143
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 144 DIIHRDLKPSNLAVNED 160
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 156
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 157 DIIHRDLKPSNLAVNED 173
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 142
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 143 DIIHRDLKPSNLAVNED 159
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 156
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 157 DIIHRDLKPSNLAVNED 173
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 155
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 156 DIIHRDLKPSNLAVNED 172
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 151
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 152 DIIHRDLKPSNLAVNED 168
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 149
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 DIIHRDLKPSNLAVNED 166
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 141
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 142 DIIHRDLKPSNLAVNED 158
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 146
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 147 DIIHRDLKPSNLAVNED 163
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 155
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 156 DIIHRDLKPSNLAVNED 172
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 78/191 (40%), Gaps = 29/191 (15%)
Query: 2 PVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLV 55
P + +D + L P+ S E + + +GRG+ G V + + V
Sbjct: 3 PDELPLDEHCERL--PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTV 60
Query: 56 AVNRL-EKVLDEREREFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLA 112
AV L E R +E+K+ I HH N+V LLG + ++V E+ G+L+
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 113 DILFNAEKQ--PNWIERTGIARD-------------IARGILYLHDECETQIIHCDIKPQ 157
L + + P + + +D +A+G+ +L + IH D+ +
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAAR 177
Query: 158 NILMDENRCAK 168
NIL+ E K
Sbjct: 178 NILLSEKNVVK 188
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 167
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 168 DIIHRDLKPSNLAVNED 184
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 146
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 147 DIIHRDLKPSNLAVNED 163
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 151
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 152 DIIHRDLKPSNLAVNED 168
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 146
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 147 DIIHRDLKPSNLAVNED 163
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 75
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 188
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 151
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 152 DIIHRDLKPSNLAVNED 168
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 163
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 164 DIIHRDLKPSNLAVNED 180
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 141
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 142 DIIHRDLKPSNLAVNED 158
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 75
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 76 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 135
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 188
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 164
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 165 DIIHRDLKPSNLAVNED 181
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 150
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 151 DIIHRDLKPSNLAVNED 167
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 146
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 147 DIIHRDLKPSNLAVNED 163
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 17/139 (12%)
Query: 36 VGRGSSGTV---YKGAMINRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL 90
VG G+ G+V Y + RQ VAV +L + R E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 91 -----GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
S+E ++ + + L +I+ ++ + + RG+ Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF--LVYQLLRGLKYIHS-- 149
Query: 146 ETQIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 -AGIIHRDLKPSNVAVNED 167
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 151
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 152 DIIHRDLKPSNLAVNED 168
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.9 bits (76), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 167
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 168 DIIHRDLKPSNLAVNED 184
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 112
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 113 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 172
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 225
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 33.9 bits (76), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 149
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 DIIHRDLKPSNLAVNED 166
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 150
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 151 DIIHRDLKPSNLAVNED 167
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 66
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 150
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 151 DIIHRDLKPSNLAVNED 167
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 66
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILVY-EYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 188 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 246
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 247 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 272
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 66
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILVY-EYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 27/176 (15%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 7 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 66
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILVY-EYMSNGSLADILFNAEKQ--PNWI 125
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + P +
Sbjct: 67 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKV 126
Query: 126 ERTGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVK 179
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 202 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 260
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 261 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 286
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 25/174 (14%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 18 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHR 77
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIER 127
+E+K+ I HH N+V LLG + ++V E+ G+L+ L + + +
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKP 137
Query: 128 TGIARD-------------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
+ +D +A+G+ +L + IH D+ +NIL+ E K
Sbjct: 138 EDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVK 188
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.5 bits (75), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 71/194 (36%), Gaps = 36/194 (18%)
Query: 8 DSNYSTLTTPFSFSYAE---LKKITDGFKEKVGRGSSGTVYKGAMINRQL------VAVN 58
+ N T P Y E + F + +G G+ G V + VAV
Sbjct: 8 EGNSYTFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVK 67
Query: 59 RLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGSLADIL- 115
L+ E+E +E+K++ H N+V LLG +++ EY G L + L
Sbjct: 68 MLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR 127
Query: 116 ----------FNAEKQPNWIERTG-----------IARDIARGILYLHDECETQIIHCDI 154
+ P +++ + +A+G+ +L + IH D+
Sbjct: 128 RKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDV 184
Query: 155 KPQNILMDENRCAK 168
+N+L+ AK
Sbjct: 185 AARNVLLTNGHVAK 198
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 33.5 bits (75), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
+G G+ G+V L VAV +L + + E++++ H N++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 149
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 150 DIIHRDLKPSNLAVNED 166
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 134 HRDIAARNVLVSSNDCVK 151
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 134 HRDIAARNVLVSSNDCVK 151
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 23 AELKKITDGFKE---KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER-EREFQTEIKVI 78
+E +++ D F+ KVGRG+ G VYK + + L+++ EI ++
Sbjct: 13 SERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALL 72
Query: 79 GRTHHRNLVRLLGYSLEVS--KKILVYEYMSNGSLADILFN----AEKQPNWIER---TG 129
H N++ L L + K L+++Y + I F+ A K+P + R
Sbjct: 73 RELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKS 132
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
+ I GI YLH ++H D+KP NIL+
Sbjct: 133 LLYQILDGIHYLH---ANWVLHRDLKPANILV 161
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 130
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 131 HRDIAARNVLVSSNDCVK 148
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 33.1 bits (74), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 161
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 162 HRDIAARNVLVSSNDCVK 179
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 33.1 bits (74), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 83 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 138
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 139 HRDIAARNVLVSSNDCVK 156
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 120
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 121 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 146
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 33.1 bits (74), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 80 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 135
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 136 HRDIAARNVLVSSNDCVK 153
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.1 bits (74), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 122 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 147
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 81 GVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFV 136
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 137 HRDIAARNVLVSSNDCVK 154
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 122 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 147
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.1 bits (74), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 18/140 (12%)
Query: 34 EKVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLV 87
E +G+G V + G ++V V + + + E + H ++V
Sbjct: 30 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 89
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN--WIERTGIARDIARGIL----YL 141
LL +V+E+M AD+ F K+ + ++ +A R IL Y
Sbjct: 90 ELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 142 HDECETQIIHCDIKPQNILM 161
HD IIH D+KP +L+
Sbjct: 147 HD---NNIIHRDVKPHCVLL 163
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 121
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 122 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 147
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.1 bits (74), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA 131
+TEI+++ + +H ++++ + + +V E M G L D + ++ +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY 127
Query: 132 RDIARGILYLHDECETQIIHCDIKPQNILM 161
+ + + YLH E IIH D+KP+N+L+
Sbjct: 128 Q-MLLAVQYLH---ENGIIHRDLKPENVLL 153
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 25/147 (17%)
Query: 28 ITDGFK--EKVGRGS-----------SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE 74
+TD ++ E +G+G+ +G Y +IN + ++ +K+ ERE
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKL--EREARICRL 59
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
+K H N+VRL E LV++ ++ G L + + E + + + I
Sbjct: 60 LK------HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIQQI 112
Query: 135 ARGILYLHDECETQIIHCDIKPQNILM 161
+L+ H + ++H D+KP+N+L+
Sbjct: 113 LEAVLHCH---QMGVVHRDLKPENLLL 136
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 33.1 bits (74), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-ETQIIHCDIKPQN 158
+LV E S G+L + + + P + G+ A +LY+ ++ + +IIH DIKP N
Sbjct: 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDN 202
Query: 159 ILM 161
++
Sbjct: 203 FIL 205
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 134 HRDIAARNVLVSSNDCVK 151
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 18/140 (12%)
Query: 34 EKVGRGSSGTVYK------GAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLV 87
E +G+G V + G ++V V + + + E + H ++V
Sbjct: 32 EVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIV 91
Query: 88 RLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPN--WIERTGIARDIARGIL----YL 141
LL +V+E+M AD+ F K+ + ++ +A R IL Y
Sbjct: 92 ELLETYSSDGMLYMVFEFMDG---ADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 142 HDECETQIIHCDIKPQNILM 161
HD IIH D+KP +L+
Sbjct: 149 HD---NNIIHRDVKPHCVLL 165
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 25/175 (14%)
Query: 17 PFSFSYAELKKITDGFKEKVGRGSSGTVYKGAMI------NRQLVAVNRL-EKVLDERER 69
P+ S E + + +GRG+ G V + + VAV L E R
Sbjct: 18 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHR 77
Query: 70 EFQTEIKV-IGRTHHRNLVRLLGYSLEVSKKILV-YEYMSNGSLADILFNAEKQPNWIER 127
+E+K+ I HH N+V LLG + ++V E+ G+L+ L K+ ++
Sbjct: 78 ALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPY 135
Query: 128 TGIARDIARGILYL-HDECET-------------QIIHCDIKPQNILMDENRCAK 168
D+ + L L H C + + IH D+ +NIL+ E K
Sbjct: 136 KEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVK 190
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ N C K
Sbjct: 514 HRDIAARNVLVSSNDCVK 531
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 36 VGRGSSGTVYKGAMINRQ---LVAVNRLEKVL------DEREREFQTEIKVIGRTHHRNL 86
+G G+ G V+ + +V + EKVL D + + EI ++ R H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 87 VRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYLHDE 144
+++L LV E +GS D+ ++ P E I R + + YL +
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149
Query: 145 CETQIIHCDIKPQNILMDENRCAK 168
IIH DIK +NI++ E+ K
Sbjct: 150 ---DIIHRDIKDENIVIAEDFTIK 170
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYS 93
+++G+G G V+ G + VAV ++ +E +TEI H N++ +
Sbjct: 43 KQIGKGRYGEVWMGKWRGEK-VAV-KVFFTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 94 LE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC---- 145
++ ++ L+ +Y NGSL D L + + + +A G+ +LH E
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK--LAYSSVSGLCHLHTEIFSTQ 158
Query: 146 -ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 159 GKPAIAHRDLKSKNILVKKN 178
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 55 VAVNRLEKVLDERERE-FQTEIKVIGRT-HHRNLVRLLGYSLEVSKKILVYEYMSNGSLA 112
VAV L++ D ERE +E+K++ + H N+V LLG L++EY G L
Sbjct: 78 VAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLL 137
Query: 113 DIL 115
+ L
Sbjct: 138 NYL 140
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 130 IARDIARGILYLHDEC-ETQIIHCDIKPQNILMDEN 164
+ R A IL D + +IIHCD+KP+NIL+ +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 122 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 175
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 176 IVHSDLKPANFLI 188
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 130 IARDIARGILYLHDEC-ETQIIHCDIKPQNILMDEN 164
+ R A IL D + +IIHCD+KP+NIL+ +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 130 IARDIARGILYLHDEC-ETQIIHCDIKPQNILMDEN 164
+ R A IL D + +IIHCD+KP+NIL+ +
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ 236
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRL-EKVLDERERE--FQTEIKVIGRTHHRNLVRLLG 91
+G GS G V Q VA+ + +KVL + + + + EI + H ++++L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ I+V EY N L D + +K E + I + Y H +I+H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ-EARRFFQQIISAVEYCH---RHKIVH 126
Query: 152 CDIKPQNILMDENRCAK 168
D+KP+N+L+DE+ K
Sbjct: 127 RDLKPENLLLDEHLNVK 143
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRL-EKVLDERERE--FQTEIKVIGRTHHRNLVRLLG 91
+G GS G V Q VA+ + +KVL + + + + EI + H ++++L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ I+V EY N L D + +K E + I + Y H +I+H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ-EARRFFQQIISAVEYCH---RHKIVH 136
Query: 152 CDIKPQNILMDENRCAK 168
D+KP+N+L+DE+ K
Sbjct: 137 RDLKPENLLLDEHLNVK 153
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRL-EKVLDERERE--FQTEIKVIGRTHHRNLVRLLG 91
+G GS G V Q VA+ + +KVL + + + + EI + H ++++L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ I+V EY N L D + +K E + I + Y H +I+H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ-EARRFFQQIISAVEYCH---RHKIVH 135
Query: 152 CDIKPQNILMDENRCAK 168
D+KP+N+L+DE+ K
Sbjct: 136 RDLKPENLLLDEHLNVK 152
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 34 EKVGRGS-----------SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTH 82
E++G+G+ +G Y +IN + ++ +K+ ERE +K
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKL--EREARICRLLK------ 79
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
H N+VRL E L+++ ++ G L + + E + + + I +L+ H
Sbjct: 80 HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQILEAVLHCH 138
Query: 143 DECETQIIHCDIKPQNILM 161
+ ++H D+KP+N+L+
Sbjct: 139 ---QMGVVHRDLKPENLLL 154
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 104
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + ++ L +L + I I RG+ Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 161
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 162 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 199
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 140
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 141 DIIHRDLKPSNLAVNED 157
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 15 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 74
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 75 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 128
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 129 IVHSDLKPANFLI 141
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 122 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 175
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 176 IVHSDLKPANFLI 188
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 62 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 121
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 122 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 175
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 176 IVHSDLKPANFLI 188
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 140
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 141 DIIHRDLKPSNLAVNED 157
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 9/137 (6%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRL-EKVLDERERE--FQTEIKVIGRTHHRNLVRLLG 91
+G GS G V Q VA+ + +KVL + + + + EI + H ++++L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+ I+V EY N L D + +K E + I + Y H +I+H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQ-EARRFFQQIISAVEYCH---RHKIVH 130
Query: 152 CDIKPQNILMDENRCAK 168
D+KP+N+L+DE+ K
Sbjct: 131 RDLKPENLLLDEHLNVK 147
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 154
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 155 DIIHRDLKPSNLAVNED 171
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 94 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 147
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 148 IVHSDLKPANFLI 160
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 144
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 145 DIIHRDLKPSNLAVNED 161
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIH---SA 163
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 164 DIIHRDLKPSNLAVNED 180
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 150
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 151 DIIHRDLKPSNLAVNED 167
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 65
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 66 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 123
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKN 145
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 34 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 93
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 94 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 147
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 148 IVHSDLKPANFLI 160
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQ--FLIYQILRGLKYIH---SA 164
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 165 DIIHRDLKPSNLAVNED 181
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 18 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 77
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 78 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 131
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 132 IVHSDLKPANFLI 144
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 46 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 103
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 104 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 161
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKN 183
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 36 VGRGSSGTVYKGAMINR-QLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLL-- 90
VG G+ G+V VAV +L + + E++++ H N++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 91 ---GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECET 147
SLE + + ++ L +I+ + + ++ + I RG+ Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQF--LIYQILRGLKYIH---SA 164
Query: 148 QIIHCDIKPQNILMDEN 164
IIH D+KP N+ ++E+
Sbjct: 165 DIIHRDLKPSNLAVNED 181
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 64
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 65 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 122
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKN 144
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 33 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 90
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 91 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 148
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKN 170
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 67
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 68 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 125
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKN 147
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 11 YSTLTTPFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLV----AVNRLEKVL 64
Y PF+ +++ + F+ + +GRG+ G V + N V +N+ E +
Sbjct: 55 YLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLK 114
Query: 65 DEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQ-P 122
F+ E V+ + + L Y+ + + LV +Y G L +L E + P
Sbjct: 115 RAETACFREERDVLVNGDSK-WITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP 173
Query: 123 NWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
+ R +A ++ I +H + +H DIKP NILMD N
Sbjct: 174 EEMARFYLA-EMVIAIDSVH---QLHYVHRDIKPDNILMDMN 211
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 32 FKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLG 91
+E +G+G G V++G + VAV ++ +ER + EI H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEE-VAV-KIFSSREERSWFREAEIYQTVMLRHENILGFIA 70
Query: 92 YSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC-- 145
+ ++ LV +Y +GSL D L + + +A A G+ +LH E
Sbjct: 71 ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIK--LALSTASGLAHLHMEIVG 128
Query: 146 ---ETQIIHCDIKPQNILMDEN 164
+ I H D+K +NIL+ +N
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKN 150
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 51 NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS 110
+ +LVAV +E+ ++ + + EI H N+VR L + +V EY S G
Sbjct: 43 SNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
L + + NA + + E + + G+ Y H Q+ H D+K +N L+D
Sbjct: 102 LFERICNAGRF-SEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLD 149
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 51 NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS 110
+ +LVAV +E+ ++ + + EI H N+VR L + +V EY S G
Sbjct: 43 SNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 101
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
L + + NA + + E + + G+ Y H Q+ H D+K +N L+D
Sbjct: 102 LFERICNAGRF-SEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLD 149
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 34 EKVGRGSSGTVYKGAMINRQLVAVN--RLEKVLDEREREFQTEIKVIGR--THHRNLVRL 89
+++G G S V++ +Q+ A+ LE+ ++ ++ EI + + H ++RL
Sbjct: 14 KQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRL 73
Query: 90 LGYSLEVSKKILVYEYMSNGSL-ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
Y E++ + +Y M G++ + +K + ER +++ + +H +
Sbjct: 74 --YDYEITDQ-YIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHG 127
Query: 149 IIHCDIKPQNILM 161
I+H D+KP N L+
Sbjct: 128 IVHSDLKPANFLI 140
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
Query: 51 NRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGS 110
+ +LVAV +E+ ++ + + EI H N+VR L + +V EY S G
Sbjct: 42 SNELVAVKYIERG-EKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGE 100
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
L + + NA + + E + + G+ Y H Q+ H D+K +N L+D
Sbjct: 101 LFERICNAGRF-SEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLD 148
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 51 NRQLVAVN---RLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMS 107
+ +LVAV R EK+ +RE + H N+VR L + +V EY S
Sbjct: 43 SNELVAVKYIERGEKIAANVKREIINHRSL----RHPNIVRFKEVILTPTHLAIVMEYAS 98
Query: 108 NGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILMD 162
G L + + NA + + E + + G+ Y H Q+ H D+K +N L+D
Sbjct: 99 GGELFERICNAGRF-SEDEARFFFQQLISGVSYCH---AMQVCHRDLKLENTLLD 149
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 84
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 141
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHD 179
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 34 EKVGRGSSGTVYKGA--MINRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
E++G+G+ V + + ++ A+ K L R+ + + E ++ H N+VRL
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 76
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
E L+++ ++ G L + + E + + + I +L+ H + ++
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSE-ADASHCIQQILEAVLHCH---QMGVV 132
Query: 151 HCDIKPQNILM 161
H ++KP+N+L+
Sbjct: 133 HRNLKPENLLL 143
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 83 HRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLH 142
H N+VR L + +V EY S G L + + NA + + E + + G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRF-SEDEARFFFQQLISGVSYAH 132
Query: 143 DECETQIIHCDIKPQNILMD 162
Q+ H D+K +N L+D
Sbjct: 133 ---AMQVAHRDLKLENTLLD 149
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 84
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 141
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 179
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
G+G+ GTV G + + VA+ ++ + R RE Q ++ + HH N+V+L Y
Sbjct: 31 AGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQLQSYFY 89
Query: 95 EVSKKI-------LVYEYMSNG--SLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+ ++ +V EY+ + + + P I + R I LH
Sbjct: 90 TLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP- 148
Query: 146 ETQIIHCDIKPQNILMDE 163
+ H DIKP N+L++E
Sbjct: 149 SVNVCHRDIKPHNVLVNE 166
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E M L D + ER + ++AR + E
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 126
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNR 151
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 9/144 (6%)
Query: 23 AELKKITDGFK--EKVGRGSSGTV---YKGAMINRQLVAVNRLEKVLDEREREFQTEIKV 77
A + TD ++ E++G+G+ V K + +K+ ++ + E ++
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 78 IGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARG 137
H N+VRL E LV++ ++ G L + + E + + I
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE-ADASHCIHQILES 142
Query: 138 ILYLHDECETQIIHCDIKPQNILM 161
+ ++H + I+H D+KP+N+L+
Sbjct: 143 VNHIH---QHDIVHRDLKPENLLL 163
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 70/137 (51%), Gaps = 16/137 (11%)
Query: 35 KVGRGSSGTVYKGAMINRQ---LVAVNRLEKVLDERE-REFQTEIKVIGRTHH-RNLVRL 89
++G G+ G V+K M R+ ++AV ++ + ++ E + ++ V+ ++H +V+
Sbjct: 32 EMGSGTCGQVWK--MRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQC 89
Query: 90 LGYSLEVSKKILVYEYMSNGSLADILFNAEKQP---NWIERTGIARDIARGILYLHDECE 146
G + + + E M G+ A+ L + P + + +A I + + YL ++
Sbjct: 90 FGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVA--IVKALYYLKEK-- 143
Query: 147 TQIIHCDIKPQNILMDE 163
+IH D+KP NIL+DE
Sbjct: 144 HGVIHRDVKPSNILLDE 160
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI-- 130
E +++ + + R +V L Y+ E + LV M+ G L +++ Q + E +
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFY 291
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ LH E +I++ D+KP+NIL+D++
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDH 322
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 84
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 141
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 142 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 179
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 31.2 bits (69), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 74 EIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI-- 130
E +++ + + R +V L Y+ E + LV M+ G L +++ Q + E +
Sbjct: 234 EKQILEKVNSRFVVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHM-GQAGFPEARAVFY 291
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ LH E +I++ D+KP+NIL+D++
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDH 322
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 84
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 141
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 142 --SANVLHRDLKPSNLLLN 158
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 92
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 93 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 149
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 150 --SANVLHRDLKPSNLLLN 166
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 84
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 141
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 142 --SANVLHRDLKPSNLLLN 158
>pdb|4HGV|A Chain A, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|B Chain B, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|C Chain C, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|D Chain D, Crystal Structure Of A Fumarate Hydratase
Length = 495
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 49 MINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL------GYSLEVSKKI 100
+I+ L A+ L K L+E+ + F IK IGRTH ++ L GY+ +V+ I
Sbjct: 188 VIHDLLPALKHLHKALEEKVKAFDHIIK-IGRTHTQDATPLTLGQEFSGYAAQVASSI 244
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYXQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 146 --SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 86
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 143
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 144 --SANVLHRDLKPSNLLLN 160
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 133
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ C K
Sbjct: 134 HRDIAARNVLVSATDCVK 151
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 17 PFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLV----AVNRLEKVLDERERE 70
PF+ E++ + F+ + +GRG+ G V M N + + +N+ E +
Sbjct: 61 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 120
Query: 71 FQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAE-KQPNWIERT 128
F+ E V+ + + L Y+ + + LV +Y G L +L E K P + R
Sbjct: 121 FREERDVLVNGDCQ-WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 179
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I ++ I +H + +H DIKP N+L+D N
Sbjct: 180 YIG-EMVLAIDSIH---QLHYVHRDIKPDNVLLDVN 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.4 bits (67), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 67/166 (40%), Gaps = 38/166 (22%)
Query: 34 EKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGY 92
E +G G G V+K I+ + + R++ ++ ERE +K + + H N+V G
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGC 73
Query: 93 -------------SLEVSKKILVYEYMSNGSLADILF------NAEKQPNWIE-RTGIAR 132
SLE S S+ S LF + WIE R G
Sbjct: 74 WDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 133
Query: 133 D----------IARGILYLHDECETQIIHCDIKPQNILMDENRCAK 168
D I +G+ Y+H + ++IH D+KP NI + + + K
Sbjct: 134 DKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVK 176
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLHSAG 146
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 147 ---IIHRDLKPSNIVVKSDATLK 166
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 104
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 105 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 161
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 162 --SANVLHRDLKPSNLLLN 178
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 146 --SANVLHRDLKPSNLLLN 162
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 17 PFSFSYAELKKITDGFK--EKVGRGSSGTVYKGAMINRQLV----AVNRLEKVLDERERE 70
PF+ E++ + F+ + +GRG+ G V M N + + +N+ E +
Sbjct: 77 PFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETAC 136
Query: 71 FQTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAE-KQPNWIERT 128
F+ E V+ + + L Y+ + + LV +Y G L +L E K P + R
Sbjct: 137 FREERDVLVNGDCQ-WITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARF 195
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I ++ I +H + +H DIKP N+L+D N
Sbjct: 196 YIG-EMVLAIDSIH---QLHYVHRDIKPDNVLLDVN 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 30.4 bits (67), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 89
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 146
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 147 --SANVLHRDLKPSNLLLN 163
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 89
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 90 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 146
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 147 --SANVLHRDLKPSNLLLN 163
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 90
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 91 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 147
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 148 --SANVLHRDLKPSNLLLN 164
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 81
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 82 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 138
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 139 --SANVLHRDLKPSNLLLN 155
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 146 --SANVLHRDLKPSNLLLN 162
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 82
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 139
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 140 --SANVLHRDLKPSNLLLN 156
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 82
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 83 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 139
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 140 --SANVLHRDLKPSNLLLN 156
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V + + VA+ ++ E QT EI+++ R H N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPF------EHQTYCQRTLREIQILLRFRHENVI 104
Query: 88 R----LLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
L +LE + + + + + L +L + + + I I RG+ Y+H
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHI--CYFLYQILRGLKYIH- 161
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 162 --SANVLHRDLKPSNLLIN 178
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.4 bits (67), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPF------EHQTYCQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 146 --SANVLHRDLKPSNLLLN 162
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.0 bits (66), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 9/138 (6%)
Query: 36 VGRGSSGTVYKGAMINRQ----LVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLL 90
+G G G V++G ++ + VA+ + + RE F E + + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + ++ E + G L L + + A ++ + YL + + +
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFV 513
Query: 151 HCDIKPQNILMDENRCAK 168
H DI +N+L+ C K
Sbjct: 514 HRDIAARNVLVSATDCVK 531
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.0 bits (66), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 47 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 98
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY++ G + L +P+ A I YLH +I+
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH---ARFYAAQIVLTFEYLHS---LDLIYR 152
Query: 153 DIKPQNILMDEN 164
D+KP+N+L+DE
Sbjct: 153 DLKPENLLIDEQ 164
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLHS-- 144
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 145 -AGIIHRDLKPSNIVVKSDATLK 166
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLVGIKHLHS-- 144
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 145 -AGIIHRDLKPSNIVVKSDATLK 166
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 101 LVYEYMSNGSLADILFN-AEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
LV EY G L +L E+ P + R +A +I I +H +H DIKP NI
Sbjct: 138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIVMAIDSVH---RLGYVHRDIKPDNI 193
Query: 160 LMDENRCA 167
L+D RC
Sbjct: 194 LLD--RCG 199
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 29.6 bits (65), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 32 FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVR 88
K +G G+ G V ++VA+ ++E D+ +T EIK++ H N++
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIIT 73
Query: 89 LLGY----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
+ S E ++ + + + L ++ + I+ R + LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG- 130
Query: 145 CETQIIHCDIKPQNILMDENRCAKNFRLWIGK-VDEARSD 183
+ +IH D+KP N+L++ N K + + +DE+ +D
Sbjct: 131 --SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 32 FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVR 88
K +G G+ G V ++VA+ ++E D+ +T EIK++ H N++
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIIT 73
Query: 89 LLGY----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
+ S E ++ + + + L ++ + I+ R + LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG- 130
Query: 145 CETQIIHCDIKPQNILMDENRCAKNFRLWIGK-VDEARSD 183
+ +IH D+KP N+L++ N K + + +DE+ +D
Sbjct: 131 --SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ R H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPF------EHQTYCQRTLREIKILLRFRHENII 88
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 89 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHI--CYFLYQILRGLKYIH- 145
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 146 --SANVLHRDLKPSNLLLN 162
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 29.6 bits (65), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 32 FKEKVGRGSSGTVYKGAM-INRQLVAVNRLEKVLDEREREFQT--EIKVIGRTHHRNLVR 88
K +G G+ G V ++VA+ ++E D+ +T EIK++ H N++
Sbjct: 15 LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIIT 73
Query: 89 LLGY----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDE 144
+ S E ++ + + + L ++ + I+ R + LH
Sbjct: 74 IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY--FIYQTLRAVKVLHG- 130
Query: 145 CETQIIHCDIKPQNILMDENRCAKNFRLWIGK-VDEARSD 183
+ +IH D+KP N+L++ N K + + +DE+ +D
Sbjct: 131 --SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNIL 160
E I RDI I +LH I H D+KP+N+L
Sbjct: 110 EAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLL 141
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNIL 160
E I RDI I +LH I H D+KP+N+L
Sbjct: 129 EAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLL 160
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 146 ETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 145 -AGIIHRDLKPSNIVVKSDATLK 166
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLCGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 28/143 (19%)
Query: 36 VGRGSSGTV-----------YKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHH 83
+G+GS G V Y +N+Q V N + V E++++ H
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF--------KELQIMQGLEH 74
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTG--IARDIARGILYL 141
LV L + +V + + G D+ ++ ++ ++ E T ++ + YL
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGG---DLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 142 HDECETQIIHCDIKPQNILMDEN 164
++ +IIH D+KP NIL+DE+
Sbjct: 132 QNQ---RIIHRDMKPDNILLDEH 151
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 145 ---AGIIHRDLKPSNIVVKSDATLK 166
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 162 EASEIXKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 198
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 144 --SAGIIHRDLKPSNIVVKSDXTLK 166
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%), Gaps = 15/142 (10%)
Query: 36 VGRGSSGTVYKG-AMINRQLVAVNRLEKVLDE--REREFQTEIKVIGRTHHRNLVRLLGY 92
+G GS G V + + +++VA+ ++ +V ++ + EI ++ R +H ++V++L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 93 SL--EVSKKILVYEYMSNGSLADILFNAE-KQPNWIERTGIAR---DIARGILYLHDECE 146
+ +V K +Y + +AD F + P ++ I ++ G+ Y+H
Sbjct: 121 VIPKDVEKFDELYVVLE---IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---S 174
Query: 147 TQIIHCDIKPQNILMDENRCAK 168
I+H D+KP N L++++ K
Sbjct: 175 AGILHRDLKPANCLVNQDCSVK 196
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 80
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLXQVI---QMELDHERMSYLLYQMLXGIKHLH- 136
Query: 144 ECETQIIHCDIKPQNILMDENRCAK 168
IIH D+KP NI++ + K
Sbjct: 137 --SAGIIHRDLKPSNIVVKSDXTLK 159
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDERER-EFQTEIKVI--GRTHHRNLVRLLG 91
K+G GS G +Y G I +LE V + + ++++I I G T N VR G
Sbjct: 14 KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPN-VRWFG 72
Query: 92 YSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIH 151
+E +LV + + SL D+ ++ + +A + + ++H + +H
Sbjct: 73 --VEGDYNVLVMDLLGP-SLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLH 126
Query: 152 CDIKPQNILMDENRCA 167
DIKP N LM R A
Sbjct: 127 RDIKPDNFLMGLGRRA 142
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 124 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 160
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 162 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 198
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 132 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 168
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 168 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 204
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 123 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 159
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 122 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 158
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 118 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 154
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 117 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 153
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 118 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 154
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 116 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 152
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 116 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 152
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 81
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 82 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 138
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 139 ---AGIIHRDLKPSNIVV 153
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDENR 165
E + I + I I YLH I H D+KP+N+L R
Sbjct: 118 EASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKR 154
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 1 MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKG--AMINRQLVAVN 58
M K K+D+ + ++ S ++ LK+ + + +G G+ G V A+++R VA+
Sbjct: 1 MASKSKVDNQFYSVEVGDS-TFTVLKRYQN--LKPIGSGAQGIVCAAYDAVLDRN-VAIK 56
Query: 59 RLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGY-----SLEVSKKILVYEYMSNGS 110
+L + + +R ++ E+ ++ +H+N++ LL +LE + + + + + +
Sbjct: 57 KLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN 115
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
L ++ + + + + + + GI +LH IIH D+KP NI++
Sbjct: 116 LCQVI---QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVV 160
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EYM G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
+A + + +LH E Q+ H D+KP+NIL
Sbjct: 160 MAYQLCHALRFLH---ENQLTHTDLKPENILF 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EYM G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 146 ETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 -AGIIHRDLKPSNIVV 159
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 125
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 181
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 182 --SAGIIHRDLKPSNIVV 197
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 35 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 92
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 93 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 149
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 150 ---AGIIHRDLKPSNIVV 164
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L+ ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLSQVI---QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 ---AGIIHRDLKPSNIVV 159
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 28 ITDGFK--EKVGRGS-----------SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE 74
+TD ++ E++G+G+ +G Y +IN + ++ +K+ ERE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL--EREARICRL 59
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
+K H N+VRL E LV++ ++ G L + + E A
Sbjct: 60 LK------HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEADASHC 108
Query: 135 ARGILYLHDECETQ-IIHCDIKPQNILM 161
+ IL + C I+H D+KP+N+L+
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 ---AGIIHRDLKPSNIVV 159
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERER---EFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNAL-KASQARDLLSKMLVI 304
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
++GRG+ G V K + + Q+ AV R+ ++ +E++ ++ + RT
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 93 SLEVSKKILVYEYMSNGSL----ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
+L + + + + SL ++ + P I IA I + + +LH +
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDI-LGKIAVSIVKALEHLHSKL--S 157
Query: 149 IIHCDIKPQNILMD 162
+IH D+KP N+L++
Sbjct: 158 VIHRDVKPSNVLIN 171
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDEN 164
KP+N+L+D+
Sbjct: 168 KPENLLIDQQ 177
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
+A + + +LH E Q+ H D+KP+NIL
Sbjct: 137 MAYQLCHALRFLH---ENQLTHTDLKPENILF 165
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 61 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 112
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 168
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 169 KPENLLIDQ 177
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 12/134 (8%)
Query: 33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE--IKVIGRTHHRNLVRLL 90
+ +VGRGS G V++ M ++Q ++KV R F+ E + G + R +V L
Sbjct: 63 QPRVGRGSFGEVHR--MKDKQTGFQCAVKKV---RLEVFRVEELVACAGLSSPR-IVPLY 116
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + E + GSL ++ P + + + G+ YLH +I+
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-EGLEYLHTR---RIL 172
Query: 151 HCDIKPQNILMDEN 164
H D+K N+L+ +
Sbjct: 173 HGDVKADNVLLSSD 186
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 55 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 106
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY++ G + L +P+ A I YLH +I+
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYR 160
Query: 153 DIKPQNILMDEN 164
D+KP+N+L+D+
Sbjct: 161 DLKPENLLIDQQ 172
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 36 VGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVRLL 90
+G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIGLL 89
Query: 91 GY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS-- 144
Query: 146 ETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 -AGIIHRDLKPSNIVV 159
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 23/160 (14%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLAFRHENII 86
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 143
Query: 144 ECETQIIHCDIKPQNILMDENRCAKNFRLWIGKVDEARSD 183
++H D+KP N+L++ K + +V + D
Sbjct: 144 --SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHD 181
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 141
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNR 166
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
+A + + +LH E Q+ H D+KP+NIL
Sbjct: 128 MAYQLCHALRFLH---ENQLTHTDLKPENILF 156
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 ---AGIIHRDLKPSNIVV 159
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERER---EFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 127
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNR 152
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 31 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 88
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 89 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 145
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 146 ---AGIIHRDLKPSNIVV 160
Score = 26.9 bits (58), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERER---EFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 202 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 261
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 262 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 305
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 141
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 142 VRHCHNCGVLHRDIKDENILIDLNR 166
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 160 LMDENRCAKNFRLWIGKV 177
L+ K I +
Sbjct: 148 LISATNAVKVVDFGIARA 165
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+L+D+
Sbjct: 168 KPENLLIDQ 176
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 142
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNR 167
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 142
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNR 167
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY++ G + L +P+ A I YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYR 165
Query: 153 DIKPQNILMDE 163
D+KP+N+L+D+
Sbjct: 166 DLKPENLLIDQ 176
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 17/132 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY++ G + L +P+ A I YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYR 165
Query: 153 DIKPQNILMDEN 164
D+KP+N+L+D+
Sbjct: 166 DLKPENLLIDQQ 177
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY++ G + L +P+ A I YLH +I+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYR 165
Query: 153 DIKPQNILMDE 163
D+KP+N+L+D+
Sbjct: 166 DLKPENLLIDQ 176
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 142
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 143 VRHCHNCGVLHRDIKDENILIDLNR 167
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 127
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNR 152
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 126
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNR 151
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE--IKVIGRTHHRNLVRLL 90
+ +VGRGS G V++ M ++Q ++KV R F+ E + G + R +V L
Sbjct: 79 QPRVGRGSFGEVHR--MKDKQTGFQCAVKKV---RLEVFRVEELVACAGLSSPR-IVPLY 132
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + E + GSL ++ P + + + G+ YLH +I+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-EGLEYLHTR---RIL 188
Query: 151 HCDIKPQNILM--DENRCA 167
H D+K N+L+ D +R A
Sbjct: 189 HGDVKADNVLLSSDGSRAA 207
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 127
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNR 152
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 28 ITDGFK--EKVGRGS-----------SGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE 74
+TD ++ E++G+G+ +G Y +IN + ++ +K+ ERE
Sbjct: 2 MTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKL--EREARICRL 59
Query: 75 IKVIGRTHHRNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDI 134
+K H N+VRL E LV++ ++ G L + + E A
Sbjct: 60 LK------HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-----YYSEADASHC 108
Query: 135 ARGILYLHDECETQ-IIHCDIKPQNILM 161
+ IL + C I+H D+KP+N+L+
Sbjct: 109 IQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 68 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 125
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 126 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 181
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 182 --SAGIIHRDLKPSNIVV 197
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 144
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 145 ---AGIIHRDLKPSNIVV 159
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDE---REREFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 201 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRTYV 260
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 261 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 304
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 169
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNR 194
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 13/125 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
SG Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 86 SGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 137
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY++ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 193
Query: 160 LMDEN 164
L+D+
Sbjct: 194 LIDQQ 198
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 154
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNR 179
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 154
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNR 179
>pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein
pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein
Length = 440
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 3 VKYKIDSNYSTLTTPFSFSYAELKKITDG 31
++ I +++ +TP SF + LK +TDG
Sbjct: 302 ARFNIPADHIFYSTPHSFVFVNLKPVTDG 330
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 155
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNR 180
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 161
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 162 VRHCHNCGVLHRDIKDENILIDLNR 186
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDE- 144
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 122
Query: 145 ---CETQ-IIHCDIKPQNILMDENR 165
C ++H DIK +NIL+D NR
Sbjct: 123 VRHCHNXGVLHRDIKDENILIDLNR 147
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 29 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 86
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 87 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 142
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 143 --SAGIIHRDLKPSNIVV 158
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 155
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNR 180
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 155
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNR 180
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 154
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNR 179
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 154
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 155 VRHCHNCGVLHRDIKDENILIDLNR 179
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 155
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 156 VRHCHNCGVLHRDIKDENILIDLNR 180
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 122
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNR 147
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A++ R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 32 KPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIG 89
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL SLE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 90 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLHS 146
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 147 ---AGIIHRDLKPSNIVV 161
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 21/118 (17%)
Query: 31 GFKEKVGRGSSGTVY----KGAMINRQLVAVNRLEKVLDERER---EFQTEIKVIGRTHH 83
G+KE V S G + KG ++ +++ KV+++ EF +++ RT+
Sbjct: 203 GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV 262
Query: 84 RNLVRLLGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYL 141
N + GYS E D+LF A+ + N + + ARD+ +L +
Sbjct: 263 ENRPKYAGYSFE-------------KLFPDVLFPADSEHNKL-KASQARDLLSKMLVI 306
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 144 --SAGIIHRDLKPSNIVV 159
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 81
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 137
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 138 --SAGIIHRDLKPSNIVV 153
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 23 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 80
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 136
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 137 --SAGIIHRDLKPSNIVV 152
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 149
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 150 VRHCHNCGVLHRDIKDENILIDLNR 174
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 169
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 170 VRHCHNCGVLHRDIKDENILIDLNR 194
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 24 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 81
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 82 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 137
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 138 --SAGIIHRDLKPSNIVV 153
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 125
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 126 VRHCHNCGVLHRDIKDENILIDLNR 150
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 129 GIARDIARGILYLHDECETQIIHCDIKPQNILMDE-NRC 166
G RD + +LH + ++H D+KP NI + RC
Sbjct: 161 GYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRC 196
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 122
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 123 VRHCHNCGVLHRDIKDENILIDLNR 147
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 34 EKVGRGSSGTVYKG--AMINRQLVAVNRLEKVLDER---EREFQTEIKVIGRTHHRNLVR 88
+ +G G+ G V A+++R VA+ +L + + +R ++ E+ ++ +H+N++
Sbjct: 30 KPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIIS 87
Query: 89 LLGY-----SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
LL +LE + + + + + +L ++ + + + + + + GI +LH
Sbjct: 88 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGIKHLH- 143
Query: 144 ECETQIIHCDIKPQNILM 161
IIH D+KP NI++
Sbjct: 144 --SAGIIHRDLKPSNIVV 159
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 1 MPVKYKIDSNYSTLTTPFSFSYAELKKITDGFKEKVGRGSSGTVYKG--AMINRQLVAVN 58
M K K+D+ + ++ S ++ LK+ + + +G G+ G V A+++R VA+
Sbjct: 1 MGSKSKVDNQFYSVEVGDS-TFTVLKRYQN--LKPIGSGAQGIVCAAYDAVLDRN-VAIK 56
Query: 59 RLEKVLDER---EREFQTEIKVIGRTHHRNLVRLLGY-----SLEVSKKILVYEYMSNGS 110
+L + + +R ++ E+ ++ +H+N++ LL +LE + + + + + +
Sbjct: 57 KLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN 115
Query: 111 LADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNILM 161
L ++ + + + + + + GI +LH IIH D+KP NI++
Sbjct: 116 LCQVI---QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVV 160
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 17/127 (13%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
SG Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 86 SGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 137
Query: 100 ILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ 157
+V EY++ G + L +P+ A I YLH +I+ D+KP+
Sbjct: 138 YMVMEYVAGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYRDLKPE 191
Query: 158 NILMDEN 164
N+L+D+
Sbjct: 192 NLLIDQQ 198
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 160 LMDENRCAKNFRLWIGKV 177
++ K I +
Sbjct: 148 MISATNAVKVMDFGIARA 165
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 20/159 (12%)
Query: 23 AELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDERE----------R 69
AEL + + + + GS G V G VA+ R+ V D R +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 70 EFQTEIKVIGRTHHRNLVRL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
EI+++ HH N++ L + + K+ + + LA ++ + Q I
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVI 131
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + +L LH E ++H D+ P NIL+ +N
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 20/159 (12%)
Query: 23 AELKKITDGFKEK--VGRGSSGTVYKGAMINRQLVAVNRL-EKVLDERE----------R 69
AEL + + + + GS G V G VA+ R+ V D R +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 70 EFQTEIKVIGRTHHRNLVRL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWI 125
EI+++ HH N++ L + + K+ + + LA ++ + Q I
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD---QRIVI 131
Query: 126 ERTGIARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
I + +L LH E ++H D+ P NIL+ +N
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN 170
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 160 LMDENRCAKNFRLWIGKV 177
++ K I +
Sbjct: 148 MISATNAVKVMDFGIARA 165
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 24/145 (16%)
Query: 36 VGRGSSGTVYKGAMINRQL-VAVNRLEK--VLDEREREFQT----EIKVIGR--THHRNL 86
+G G G+VY G ++ L VA+ +EK + D E T E+ ++ + + +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 87 VRLLGYSLEVSKKILVYEYMSN-GSLADILFNAEKQPNWIERTGIARDIARGILYLHDEC 145
+RLL + +L+ E L D + ER + ++AR + E
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFI---------TERGALQEELARSFFWQVLEA 174
Query: 146 -----ETQIIHCDIKPQNILMDENR 165
++H DIK +NIL+D NR
Sbjct: 175 VRHCHNCGVLHRDIKDENILIDLNR 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 160 LMDENRCAKNFRLWIGKV 177
++ K I +
Sbjct: 148 MISATNAVKVMDFGIARA 165
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 93 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 147
Query: 160 LMDENRCAKNFRLWIGKV 177
++ K I +
Sbjct: 148 MISATNAVKVMDFGIARA 165
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 101 LVYEYMSNGSLADILFNAEKQPNWIERT-GIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ +L DI+ + P +R + D + + + H + IIH D+KP NI
Sbjct: 110 IVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANI 164
Query: 160 LMDENRCAKNFRLWIGK 176
++ K I +
Sbjct: 165 MISATNAVKVMDFGIAR 181
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 23/139 (16%)
Query: 36 VGRGSSGTVYKGA-MINRQLVAVNRLEKVLDEREREFQT-------EIKVIGRTHHRNLV 87
+G G+ G V +N+ VA+ ++ E QT EIK++ H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPF------EHQTYCQRTLREIKILLAFRHENII 86
Query: 88 RL----LGYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHD 143
+ ++E K + + + + L +L + I I RG+ Y+H
Sbjct: 87 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHI--CYFLYQILRGLKYIH- 143
Query: 144 ECETQIIHCDIKPQNILMD 162
++H D+KP N+L++
Sbjct: 144 --SANVLHRDLKPSNLLLN 160
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 5/94 (5%)
Query: 72 QTEIKVIGRTHHRNLVRLLGYSLEVSKKI-LVYEYMSNGSLADILFNAEKQPNWIERTGI 130
+TE +V+ + L Y+ + K+ L+ +Y++ G L F Q +
Sbjct: 106 RTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL----FTHLSQRERFTEHEV 161
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
+ +L L + II+ DIK +NIL+D N
Sbjct: 162 QIYVGEIVLALEHLHKLGIIYRDIKLENILLDSN 195
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDH 181
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 13/129 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V SG Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 111
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY++ G + L + R A I YLH +I+ D+
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 167
Query: 155 KPQNILMDE 163
KP+N+++D+
Sbjct: 168 KPENLIIDQ 176
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 3/32 (9%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILM 161
+A + + + +LHD ++ H D+KP+NIL
Sbjct: 142 MAFQLCQAVKFLHD---NKLTHTDLKPENILF 170
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 33 KEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE--IKVIGRTHHRNLVRLL 90
+ ++GRGS G V++ M ++Q ++KV R F+ E + G + R +V L
Sbjct: 77 QPRLGRGSFGEVHR--MKDKQTGFQCAVKKV---RLEVFRVEELVACAGLSSPR-IVPLY 130
Query: 91 GYSLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQII 150
G E + E + GSL ++ P + + + G+ YLH +I+
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQAL-EGLEYLHTR---RIL 186
Query: 151 HCDIKPQNILM--DENRCA 167
H D+K N+L+ D +R A
Sbjct: 187 HGDVKADNVLLSSDGSRAA 205
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE--IKVIGRTHHRNLVRLLGY 92
++GRGS G V++ M ++Q ++KV R F+ E + G T R +V L G
Sbjct: 81 RLGRGSFGEVHR--MEDKQTGFQCAVKKV---RLEVFRAEELMACAGLTSPR-IVPLYGA 134
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
E + E + GSL ++ P + + + G+ YLH +I+H
Sbjct: 135 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL-EGLEYLHSR---RILHG 190
Query: 153 DIKPQNILMDEN 164
D+K N+L+ +
Sbjct: 191 DVKADNVLLSSD 202
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTE--IKVIGRTHHRNLVRLLGY 92
++GRGS G V++ M ++Q ++KV R F+ E + G T R +V L G
Sbjct: 100 RLGRGSFGEVHR--MEDKQTGFQCAVKKV---RLEVFRAEELMACAGLTSPR-IVPLYGA 153
Query: 93 SLEVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
E + E + GSL ++ P + + + G+ YLH +I+H
Sbjct: 154 VREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQAL-EGLEYLHSR---RILHG 209
Query: 153 DIKPQNILMDEN 164
D+K N+L+ +
Sbjct: 210 DVKADNVLLSSD 221
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 27.7 bits (60), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDH 161
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 35 KVGRGSSGTVYKGAMI-NRQLVAVNRLEKVLDERERE-FQTEIKVIGRTHHRNLVRLLGY 92
++GRG+ G V K + + Q++AV R+ ++ +E++ ++ + RT
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 93 SLEVSKKILVYEYMSNGSL----ADILFNAEKQPNWIERTGIARDIARGILYLHDECETQ 148
+L + + + + SL ++ + P I IA I + + +LH +
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI-LGKIAVSIVKALEHLHSKLS-- 130
Query: 149 IIHCDIKPQNILMD 162
+IH D+KP N+L++
Sbjct: 131 VIHRDVKPSNVLIN 144
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY++ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDH 162
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 27.3 bits (59), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDH 161
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C +Q I+H D+KP N+++D
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDH 160
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 130 IARDIARGILYLHDECETQIIHCDIKPQNILMD 162
IA I + + +LH + +IH D+KP N+L++
Sbjct: 158 IAVSIVKALEHLHSKLS--VIHRDVKPSNVLIN 188
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V +G Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 53 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 104
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY+ G + L +P+ A I YLH +I+
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLTFEYLHS---LDLIYR 158
Query: 153 DIKPQNILMDE 163
D+KP+N+L+D+
Sbjct: 159 DLKPENLLIDQ 169
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V +G Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 112
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY+ G + L + R A I YLH +I+ D+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 168
Query: 155 KPQNILMDEN 164
KP+N+L+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V +G Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 53 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 104
Query: 95 EVSKKILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHC 152
+ S +V EY+ G + L +P+ A I YLH +I+
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYR 158
Query: 153 DIKPQNILMDE 163
D+KP+N+L+D+
Sbjct: 159 DLKPENLLIDQ 169
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V +G Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 112
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY+ G + L + R A I YLH +I+ D+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 168
Query: 155 KPQNILMDEN 164
KP+N+L+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|1HYQ|A Chain A, Mind Bacterial Cell Division Regulator From A. Fulgidus
Length = 263
Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 24 ELKKITDGFKEKVGRGSSGTVYKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIG 79
E+ ITDG K K+ GT G ++NR + L + + E E E KVIG
Sbjct: 143 EISSITDGLKTKIVAERLGTKVLGVVVNR----ITTLGIEMAKNEIEAILEAKVIG 194
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 26.9 bits (58), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ ++H+ +++ D+KP NIL+DE+
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEH 327
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 36 VGRGSSGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSL 94
V +G Y ++++Q +V + ++E L+E+ +++ + LV+L
Sbjct: 61 VKHKETGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFK 112
Query: 95 EVSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDI 154
+ S +V EY+ G + L + R A I YLH +I+ D+
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDL 168
Query: 155 KPQNILMDEN 164
KP+N+L+D+
Sbjct: 169 KPENLLIDQQ 178
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 51 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 102
Query: 100 ILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ 157
+V EY+ G + L +P+ A I YLH +I+ D+KP+
Sbjct: 103 YMVMEYVPGGEMFSHLRRIGRFSEPH---ARFYAAQIVLTFEYLHS---LDLIYRDLKPE 156
Query: 158 NILMDEN 164
N+L+D+
Sbjct: 157 NLLIDQQ 163
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ ++H+ +++ D+KP NIL+DE+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEH 328
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 26.9 bits (58), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 117
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 173
Query: 160 LMDE 163
L+D+
Sbjct: 174 LIDQ 177
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 117
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 173
Query: 160 LMDE 163
L+D+
Sbjct: 174 LIDQ 177
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ ++H+ +++ D+KP NIL+DE+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEH 328
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 131 ARDIARGILYLHDECETQIIHCDIKPQNILMDEN 164
A +I G+ ++H+ +++ D+KP NIL+DE+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEH 328
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 26.9 bits (58), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 172
Query: 160 LMDE 163
L+D+
Sbjct: 173 LIDQ 176
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 57/125 (45%), Gaps = 13/125 (10%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 86 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 137
Query: 100 ILVYEYMSNGSLADILFNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
+V EY+ G + L + R A I YLH +I+ D+KP+N+
Sbjct: 138 YMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLHS---LDLIYRDLKPENL 193
Query: 160 LMDEN 164
L+D+
Sbjct: 194 LIDQQ 198
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 26.9 bits (58), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 38/144 (26%)
Query: 35 KVGRGSSGTVYKGAMINRQLVAVNRLEKVLDER-----EREFQ---------TEIKVIGR 80
K+G GS G +Y GA I +LE V + E +F IK G
Sbjct: 16 KIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGA 75
Query: 81 THHRN--LVRLLGYSLEVSKKILVYEYMSNG-SLADILFNAEKQPNWIERTGIARDIARG 137
N ++ LLG SLE ++ + S SL +L A++ + IE
Sbjct: 76 EGDYNVMVMELLGPSLED-----LFNFCSRKFSLKTVLLLADQMISRIE----------- 119
Query: 138 ILYLHDECETQIIHCDIKPQNILM 161
Y+H + IH D+KP N LM
Sbjct: 120 --YIHSK---NFIHRDVKPDNFLM 138
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ 157
+V EY+ G + L +P+ A I YLH +I+ D+KP+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 158 NILMDE 163
N+L+D+
Sbjct: 171 NLLIDQ 176
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 116
Query: 100 ILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ 157
+V EY+ G + L +P+ A I YLH +I+ D+KP+
Sbjct: 117 YMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYRDLKPE 170
Query: 158 NILMDE 163
N+L+D+
Sbjct: 171 NLLIDQ 176
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 143 DECETQ-IIHCDIKPQNILMDENRCAKNFRL 172
D C ++ I+H D+KP N+++D + K RL
Sbjct: 146 DYCHSKGIMHRDVKPHNVMIDHQQ--KKLRL 174
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 26.9 bits (58), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 17/126 (13%)
Query: 41 SGTVYKGAMINRQ-LVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLLGYSLEVSKK 99
+G Y ++++Q +V + ++E L+E+ +++ + LV+L + S
Sbjct: 66 TGNHYAMKILDKQKVVKLKQIEHTLNEK--------RILQAVNFPFLVKLEFSFKDNSNL 117
Query: 100 ILVYEYMSNGSLADIL--FNAEKQPNWIERTGIARDIARGILYLHDECETQIIHCDIKPQ 157
+V EY+ G + L +P+ A I YLH +I+ D+KP+
Sbjct: 118 YMVMEYVPGGEMFSHLRRIGRFXEPH---ARFYAAQIVLTFEYLHS---LDLIYRDLKPE 171
Query: 158 NILMDE 163
N+L+D+
Sbjct: 172 NLLIDQ 177
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 26.6 bits (57), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 32 FKEKVGRGSSGTV-YKGAMINRQLVAVNRLEKVLDEREREFQTEIKVIGRTHHRNLVRLL 90
F +K+G G V + + A+ R+ + E Q E + +H N++RL+
Sbjct: 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 91 GYSLE----VSKKILVYEYMSNGSLADILFNAEKQPNWIERTGIA---RDIARGILYLHD 143
Y L + L+ + G+L + + + + N++ I I RG+ +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152
Query: 144 ECETQIIHCDIKPQNILMDE 163
+ H D+KP NIL+ +
Sbjct: 153 KGYA---HRDLKPTNILLGD 169
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 26.6 bits (57), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Query: 143 DECETQ-IIHCDIKPQNILMDENRCAKNFRL 172
D C ++ I+H D+KP N+++D + K RL
Sbjct: 151 DYCHSKGIMHRDVKPHNVMIDHQQ--KKLRL 179
>pdb|1PV4|A Chain A, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|B Chain B, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|C Chain C, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|D Chain D, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|E Chain E, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
pdb|1PV4|F Chain F, X-Ray Crystal Structure Of The Rho Transcription
Termination Factor In Complex With Single Stranded Dna
Length = 419
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
P +T + ++IA+ I Y H +C ++ D +P+ +
Sbjct: 179 PPKAGKTXLLQNIAQSIAYNHPDCVLXVLLIDERPEEV 216
>pdb|3ICE|A Chain A, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|B Chain B, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|C Chain C, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|D Chain D, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|E Chain E, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
pdb|3ICE|F Chain F, Rho Transcription Termination Factor Bound To Rna And
Adp-Bef3
Length = 422
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 122 PNWIERTGIARDIARGILYLHDECETQIIHCDIKPQNI 159
P +T + ++IA+ I Y H +C ++ D +P+ +
Sbjct: 182 PPKAGKTXLLQNIAQSIAYNHPDCVLXVLLIDERPEEV 219
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 26.2 bits (56), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 143 DECETQ-IIHCDIKPQNILMDE 163
D C + I+H D+KP N+L+D
Sbjct: 145 DYCHSMGIMHRDVKPHNVLIDH 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,371,899
Number of Sequences: 62578
Number of extensions: 205640
Number of successful extensions: 1971
Number of sequences better than 100.0: 989
Number of HSP's better than 100.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 651
Number of HSP's that attempted gapping in prelim test: 1159
Number of HSP's gapped (non-prelim): 1022
length of query: 183
length of database: 14,973,337
effective HSP length: 93
effective length of query: 90
effective length of database: 9,153,583
effective search space: 823822470
effective search space used: 823822470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)