Query 048221
Match_columns 181
No_of_seqs 135 out of 1561
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 07:33:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048221.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048221hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02382 probable sucrose-phos 100.0 4E-29 8.7E-34 220.0 17.4 161 13-173 119-279 (413)
2 PRK10513 sugar phosphate phosp 99.9 7.5E-27 1.6E-31 193.2 13.2 121 19-155 149-269 (270)
3 PRK15126 thiamin pyrimidine py 99.9 1.4E-26 3E-31 192.3 13.1 126 19-160 141-268 (272)
4 PRK10976 putative hydrolase; P 99.9 3.3E-26 7.1E-31 189.2 13.0 121 19-155 142-265 (266)
5 PF05116 S6PP: Sucrose-6F-phos 99.9 7.6E-25 1.7E-29 180.9 13.6 140 12-155 108-247 (247)
6 PF08282 Hydrolase_3: haloacid 99.9 1.3E-24 2.8E-29 174.7 14.5 118 17-150 137-254 (254)
7 COG0561 Cof Predicted hydrolas 99.9 1.6E-24 3.6E-29 179.0 13.4 120 22-156 143-263 (264)
8 PLN02887 hydrolase family prot 99.9 1.3E-24 2.9E-29 197.9 13.5 121 19-155 459-580 (580)
9 TIGR01485 SPP_plant-cyano sucr 99.9 9.4E-24 2E-28 173.7 16.1 137 13-155 111-248 (249)
10 TIGR02471 sucr_syn_bact_C sucr 99.9 2.6E-22 5.6E-27 163.7 14.2 126 19-154 110-235 (236)
11 PRK01158 phosphoglycolate phos 99.9 2.1E-22 4.5E-27 162.7 11.5 101 41-155 130-230 (230)
12 PRK10530 pyridoxal phosphate ( 99.9 8.5E-22 1.9E-26 162.6 12.2 92 51-155 181-272 (272)
13 TIGR01482 SPP-subfamily Sucros 99.9 1.4E-21 3E-26 157.3 10.5 85 56-153 136-224 (225)
14 TIGR00099 Cof-subfamily Cof su 99.9 1.4E-21 3E-26 160.9 10.6 115 20-150 141-256 (256)
15 PRK03669 mannosyl-3-phosphogly 99.9 1.8E-21 4E-26 162.0 9.8 118 21-155 146-269 (271)
16 TIGR01486 HAD-SF-IIB-MPGP mann 99.8 9.8E-21 2.1E-25 156.2 9.9 114 20-154 135-256 (256)
17 TIGR01487 SPP-like sucrose-pho 99.8 7.8E-20 1.7E-24 147.0 10.1 94 41-150 122-215 (215)
18 PRK00192 mannosyl-3-phosphogly 99.8 2.9E-19 6.2E-24 148.9 10.4 102 38-154 163-270 (273)
19 PRK14502 bifunctional mannosyl 99.7 1.9E-16 4.1E-21 145.6 10.8 118 20-155 572-691 (694)
20 PTZ00174 phosphomannomutase; P 99.6 1.9E-14 4.2E-19 118.5 9.9 86 34-128 155-244 (247)
21 TIGR02463 MPGP_rel mannosyl-3- 99.6 2.1E-14 4.7E-19 115.5 9.5 71 38-115 151-221 (221)
22 PRK10187 trehalose-6-phosphate 99.5 2E-13 4.3E-18 114.0 10.4 84 53-155 158-245 (266)
23 PRK12702 mannosyl-3-phosphogly 99.5 4.4E-13 9.5E-18 113.1 10.8 110 41-155 162-295 (302)
24 TIGR01484 HAD-SF-IIB HAD-super 99.4 8.3E-13 1.8E-17 104.9 9.8 61 50-114 144-204 (204)
25 TIGR02726 phenyl_P_delta pheny 99.4 1.1E-12 2.3E-17 103.0 9.0 77 69-158 82-159 (169)
26 TIGR01670 YrbI-phosphatas 3-de 99.3 6.2E-12 1.3E-16 96.8 8.5 80 67-158 74-153 (154)
27 TIGR02461 osmo_MPG_phos mannos 99.3 2.3E-12 5.1E-17 105.1 6.4 85 19-115 139-225 (225)
28 TIGR02468 sucrsPsyn_pln sucros 99.3 1.5E-11 3.3E-16 118.1 12.3 138 12-153 898-1049(1050)
29 PLN02423 phosphomannomutase 99.3 1.6E-11 3.4E-16 101.4 9.3 81 32-122 154-238 (245)
30 PRK11133 serB phosphoserine ph 99.3 2.6E-11 5.7E-16 104.0 9.8 69 68-150 247-315 (322)
31 COG3769 Predicted hydrolase (H 99.2 9E-11 1.9E-15 95.1 8.7 113 35-156 160-273 (274)
32 COG1778 Low specificity phosph 99.2 2.5E-11 5.4E-16 93.4 4.9 84 63-158 77-160 (170)
33 PRK14501 putative bifunctional 99.2 1.7E-10 3.7E-15 108.3 10.9 94 37-154 628-724 (726)
34 TIGR00685 T6PP trehalose-phosp 99.1 1.7E-10 3.6E-15 95.0 8.7 86 51-153 150-242 (244)
35 PLN02580 trehalose-phosphatase 99.1 5.5E-10 1.2E-14 97.7 11.5 102 34-154 267-377 (384)
36 PRK09484 3-deoxy-D-manno-octul 99.1 5.6E-10 1.2E-14 88.3 8.1 77 65-154 92-168 (183)
37 PLN02205 alpha,alpha-trehalose 98.9 1.2E-08 2.6E-13 97.3 12.2 103 35-155 731-846 (854)
38 COG0560 SerB Phosphoserine pho 98.7 2.3E-08 4.9E-13 81.1 6.0 104 18-128 90-198 (212)
39 PF03332 PMM: Eukaryotic phosp 98.4 4.5E-07 9.7E-12 73.7 6.1 82 35-124 130-215 (220)
40 PRK10671 copA copper exporting 98.2 5.2E-06 1.1E-10 79.4 9.3 66 69-151 700-765 (834)
41 TIGR00338 serB phosphoserine p 98.2 2.2E-06 4.8E-11 68.6 5.2 58 69-131 152-209 (219)
42 PLN03017 trehalose-phosphatase 98.1 1.8E-05 3.8E-10 69.1 10.0 102 34-154 249-359 (366)
43 PF02358 Trehalose_PPase: Treh 98.1 1.1E-05 2.4E-10 65.8 8.0 80 33-118 131-219 (235)
44 PLN02151 trehalose-phosphatase 98.1 2.1E-05 4.6E-10 68.4 9.7 102 34-154 235-345 (354)
45 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.1 5E-06 1.1E-10 65.2 5.1 53 68-125 146-198 (201)
46 TIGR02137 HSK-PSP phosphoserin 98.1 1.4E-05 3.1E-10 64.3 7.5 55 66-129 129-183 (203)
47 TIGR01116 ATPase-IIA1_Ca sarco 98.0 1.4E-05 3.1E-10 77.2 6.6 56 69-132 618-673 (917)
48 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 8E-06 1.7E-10 64.4 3.9 48 65-116 151-198 (202)
49 TIGR01497 kdpB K+-transporting 98.0 9.4E-05 2E-09 69.4 11.5 67 68-151 495-561 (675)
50 TIGR01511 ATPase-IB1_Cu copper 97.9 6.8E-05 1.5E-09 68.9 10.3 55 69-131 454-508 (562)
51 TIGR01525 ATPase-IB_hvy heavy 97.9 6.8E-05 1.5E-09 68.7 10.0 65 69-150 435-499 (556)
52 TIGR01512 ATPase-IB2_Cd heavy 97.9 7.3E-05 1.6E-09 68.3 9.8 81 41-131 371-468 (536)
53 TIGR01488 HAD-SF-IB Haloacid D 97.8 1.3E-05 2.9E-10 61.6 3.3 41 64-107 137-177 (177)
54 PRK11033 zntA zinc/cadmium/mer 97.8 0.0001 2.2E-09 69.9 8.7 61 61-132 611-671 (741)
55 TIGR01523 ATPase-IID_K-Na pota 97.7 6.6E-05 1.4E-09 73.6 6.3 56 69-132 733-789 (1053)
56 PRK13582 thrH phosphoserine ph 97.7 0.00021 4.5E-09 56.4 7.7 32 85-117 141-172 (205)
57 COG2217 ZntA Cation transport 97.6 0.00028 6E-09 66.6 9.3 90 42-151 547-652 (713)
58 TIGR01524 ATPase-IIIB_Mg magne 97.6 0.00015 3.2E-09 69.9 6.9 57 68-132 589-645 (867)
59 TIGR01106 ATPase-IIC_X-K sodiu 97.6 0.00011 2.4E-09 71.7 6.1 56 69-132 671-727 (997)
60 TIGR01517 ATPase-IIB_Ca plasma 97.6 0.00012 2.6E-09 71.0 6.1 56 69-132 656-712 (941)
61 PRK01122 potassium-transportin 97.6 0.00019 4.1E-09 67.4 6.8 71 61-150 489-559 (679)
62 PRK15122 magnesium-transportin 97.5 0.00023 5E-09 68.9 6.6 56 69-132 625-680 (903)
63 PRK10517 magnesium-transportin 97.4 0.0003 6.4E-09 68.1 6.8 56 69-132 625-680 (902)
64 TIGR01647 ATPase-IIIA_H plasma 97.4 0.00033 7.1E-09 66.6 6.7 56 69-132 522-577 (755)
65 PRK11590 hypothetical protein; 97.4 0.00028 6.1E-09 56.6 5.4 45 74-123 165-209 (211)
66 PRK14010 potassium-transportin 97.4 0.00037 8E-09 65.4 6.6 80 42-132 451-546 (673)
67 TIGR01522 ATPase-IIA2_Ca golgi 97.3 0.00053 1.1E-08 66.2 6.7 55 69-131 605-660 (884)
68 cd01427 HAD_like Haloacid deha 97.3 0.00042 9.1E-09 49.6 4.7 43 68-113 96-138 (139)
69 PRK13225 phosphoglycolate phos 97.2 0.0028 6.1E-08 53.2 9.6 46 69-117 196-241 (273)
70 COG0474 MgtA Cation transport 97.2 0.00057 1.2E-08 66.3 5.9 55 69-131 626-681 (917)
71 PLN03063 alpha,alpha-trehalose 97.2 0.0048 1E-07 59.2 12.0 54 55-108 664-721 (797)
72 PF00702 Hydrolase: haloacid d 97.2 0.00038 8.2E-09 54.6 3.7 33 73-108 183-215 (215)
73 TIGR01545 YfhB_g-proteo haloac 97.2 0.00068 1.5E-08 54.7 4.9 47 68-122 161-207 (210)
74 PLN02954 phosphoserine phospha 97.1 0.0018 3.8E-08 51.9 7.3 38 66-108 152-189 (224)
75 PRK13226 phosphoglycolate phos 97.1 0.001 2.2E-08 53.9 5.7 44 70-116 153-196 (229)
76 PRK13288 pyrophosphatase PpaX; 97.1 0.0012 2.7E-08 52.5 6.0 47 68-117 138-184 (214)
77 TIGR01261 hisB_Nterm histidino 97.0 0.0029 6.3E-08 49.1 7.3 46 69-117 104-149 (161)
78 TIGR01454 AHBA_synth_RP 3-amin 96.9 0.0077 1.7E-07 47.6 8.9 43 70-115 133-175 (205)
79 PRK13223 phosphoglycolate phos 96.9 0.0011 2.3E-08 55.5 4.1 50 65-117 154-203 (272)
80 COG4087 Soluble P-type ATPase 96.9 0.002 4.3E-08 48.7 4.8 45 85-130 90-137 (152)
81 PRK13222 phosphoglycolate phos 96.8 0.0013 2.9E-08 52.3 3.9 45 70-117 151-195 (226)
82 TIGR01449 PGP_bact 2-phosphogl 96.8 0.0018 3.8E-08 51.2 4.3 43 70-115 143-185 (213)
83 PRK10826 2-deoxyglucose-6-phos 96.8 0.0073 1.6E-07 48.4 7.8 45 69-116 149-193 (222)
84 PLN03064 alpha,alpha-trehalose 96.7 0.0057 1.2E-07 59.4 8.1 54 55-108 754-811 (934)
85 KOG3189 Phosphomannomutase [Li 96.7 0.0062 1.3E-07 49.3 7.0 83 33-123 159-245 (252)
86 TIGR03333 salvage_mtnX 2-hydro 96.7 0.002 4.4E-08 51.7 4.3 40 68-115 143-182 (214)
87 TIGR01656 Histidinol-ppas hist 96.7 0.0092 2E-07 45.1 7.6 44 69-115 102-145 (147)
88 TIGR01662 HAD-SF-IIIA HAD-supe 96.7 0.015 3.3E-07 42.7 8.4 87 19-114 39-130 (132)
89 PRK08942 D,D-heptose 1,7-bisph 96.6 0.0095 2.1E-07 46.4 7.4 44 71-117 106-149 (181)
90 TIGR01657 P-ATPase-V P-type AT 96.6 0.0024 5.2E-08 62.9 4.7 56 63-130 785-840 (1054)
91 TIGR01652 ATPase-Plipid phosph 96.6 0.0034 7.5E-08 61.8 5.5 60 62-130 750-810 (1057)
92 PF12710 HAD: haloacid dehalog 96.5 0.0031 6.7E-08 48.7 3.7 36 69-105 157-192 (192)
93 TIGR01489 DKMTPPase-SF 2,3-dik 96.4 0.0045 9.8E-08 47.7 4.0 41 66-113 146-186 (188)
94 PF13242 Hydrolase_like: HAD-h 96.4 0.009 1.9E-07 40.1 4.9 44 72-118 8-52 (75)
95 PRK09552 mtnX 2-hydroxy-3-keto 96.3 0.0044 9.6E-08 49.8 3.9 38 68-113 147-184 (219)
96 KOG0210 P-type ATPase [Inorgan 96.2 0.0065 1.4E-07 57.0 4.8 41 68-115 767-807 (1051)
97 TIGR00213 GmhB_yaeD D,D-heptos 96.2 0.017 3.6E-07 44.9 6.4 44 70-116 108-152 (176)
98 COG0546 Gph Predicted phosphat 96.2 0.013 2.8E-07 47.3 5.7 45 70-117 147-191 (220)
99 PLN03190 aminophospholipid tra 96.1 0.0082 1.8E-07 59.8 5.4 58 62-129 853-912 (1178)
100 PRK05446 imidazole glycerol-ph 96.1 0.044 9.6E-07 47.9 9.3 58 69-129 105-162 (354)
101 PRK14988 GMP/IMP nucleotidase; 96.1 0.048 1E-06 44.2 8.6 46 71-119 152-198 (224)
102 KOG0202 Ca2+ transporting ATPa 96.0 0.012 2.6E-07 56.2 5.5 55 69-131 665-720 (972)
103 PF13419 HAD_2: Haloacid dehal 96.0 0.018 4E-07 43.0 5.6 41 69-112 134-174 (176)
104 PRK06769 hypothetical protein; 96.0 0.038 8.3E-07 43.0 7.4 44 71-117 96-139 (173)
105 COG1877 OtsB Trehalose-6-phosp 95.9 0.06 1.3E-06 45.3 8.8 52 54-108 167-218 (266)
106 PLN02770 haloacid dehalogenase 95.8 0.043 9.4E-07 45.0 7.6 45 69-116 165-209 (248)
107 TIGR02253 CTE7 HAD superfamily 95.8 0.04 8.7E-07 43.7 7.0 45 70-117 152-197 (221)
108 TIGR01494 ATPase_P-type ATPase 95.7 0.016 3.4E-07 52.4 5.0 51 68-131 393-443 (499)
109 TIGR01990 bPGM beta-phosphoglu 95.7 0.0099 2.1E-07 45.8 3.2 43 69-114 142-184 (185)
110 KOG0207 Cation transport ATPas 95.6 0.021 4.6E-07 54.9 5.4 63 60-132 766-828 (951)
111 PLN02575 haloacid dehalogenase 95.5 0.066 1.4E-06 47.3 7.8 46 70-118 274-319 (381)
112 TIGR01428 HAD_type_II 2-haloal 95.5 0.058 1.3E-06 42.2 6.8 43 70-115 150-192 (198)
113 PRK11587 putative phosphatase; 95.4 0.03 6.6E-07 44.8 5.1 46 70-118 140-185 (218)
114 TIGR01422 phosphonatase phosph 95.4 0.062 1.3E-06 43.9 7.1 45 70-117 158-203 (253)
115 TIGR01544 HAD-SF-IE haloacid d 95.2 0.025 5.5E-07 47.8 4.0 38 67-107 190-230 (277)
116 TIGR02009 PGMB-YQAB-SF beta-ph 95.0 0.024 5.2E-07 43.6 3.3 40 70-112 144-183 (185)
117 PRK13478 phosphonoacetaldehyde 95.0 0.13 2.7E-06 42.6 7.8 45 70-117 160-205 (267)
118 PRK08238 hypothetical protein; 95.0 0.068 1.5E-06 48.5 6.5 50 67-126 126-175 (479)
119 PLN02779 haloacid dehalogenase 95.0 0.036 7.8E-07 46.7 4.5 44 71-117 205-248 (286)
120 TIGR01691 enolase-ppase 2,3-di 94.9 0.16 3.6E-06 41.3 7.9 44 69-115 153-196 (220)
121 PF06888 Put_Phosphatase: Puta 94.8 0.041 8.8E-07 45.4 4.1 44 63-106 144-187 (234)
122 PLN02177 glycerol-3-phosphate 94.5 0.045 9.8E-07 49.9 4.1 39 70-116 177-215 (497)
123 KOG0206 P-type ATPase [General 94.5 0.031 6.7E-07 55.3 3.2 46 69-122 781-826 (1151)
124 TIGR03351 PhnX-like phosphonat 94.4 0.053 1.1E-06 43.1 4.0 44 70-116 147-192 (220)
125 TIGR01509 HAD-SF-IA-v3 haloaci 94.4 0.071 1.5E-06 40.7 4.4 39 71-112 143-181 (183)
126 KOG0203 Na+/K+ ATPase, alpha s 94.2 0.16 3.5E-06 48.8 7.2 75 38-130 672-747 (1019)
127 TIGR02247 HAD-1A3-hyp Epoxide 94.1 0.083 1.8E-06 41.7 4.5 48 71-121 155-202 (211)
128 smart00577 CPDc catalytic doma 94.1 0.087 1.9E-06 39.9 4.3 32 74-108 104-135 (148)
129 TIGR01549 HAD-SF-IA-v1 haloaci 94.0 0.056 1.2E-06 40.4 3.2 36 69-108 119-154 (154)
130 PRK10725 fructose-1-P/6-phosph 93.9 0.08 1.7E-06 40.9 3.9 43 69-114 143-185 (188)
131 COG4030 Uncharacterized protei 93.8 0.11 2.4E-06 43.0 4.7 55 68-126 190-246 (315)
132 COG2216 KdpB High-affinity K+ 93.7 0.056 1.2E-06 49.5 3.0 55 69-131 497-551 (681)
133 TIGR01686 FkbH FkbH-like domai 93.6 0.3 6.4E-06 41.7 7.2 38 68-108 86-123 (320)
134 PLN03243 haloacid dehalogenase 93.6 0.097 2.1E-06 43.6 4.1 43 70-115 167-209 (260)
135 KOG1615 Phosphoserine phosphat 93.6 0.047 1E-06 44.0 2.1 61 61-127 151-213 (227)
136 KOG0204 Calcium transporting A 93.4 0.13 2.8E-06 49.5 4.9 56 67-130 724-780 (1034)
137 PRK09456 ?-D-glucose-1-phospha 93.1 0.16 3.6E-06 39.9 4.6 45 70-117 143-187 (199)
138 PLN02811 hydrolase 92.9 0.21 4.6E-06 40.0 5.0 44 71-117 140-186 (220)
139 TIGR01685 MDP-1 magnesium-depe 92.7 0.57 1.2E-05 36.9 7.1 49 67-115 106-157 (174)
140 TIGR01668 YqeG_hyp_ppase HAD s 92.7 0.16 3.6E-06 39.3 3.9 47 69-118 92-139 (170)
141 PLN02940 riboflavin kinase 92.6 0.16 3.5E-06 44.6 4.3 46 69-117 151-196 (382)
142 TIGR01664 DNA-3'-Pase DNA 3'-p 92.6 0.67 1.4E-05 35.9 7.3 35 71-108 111-155 (166)
143 PRK10563 6-phosphogluconate ph 92.6 0.11 2.4E-06 41.3 3.0 40 70-113 144-183 (221)
144 KOG3120 Predicted haloacid deh 92.6 0.14 2.9E-06 42.2 3.4 56 59-115 153-209 (256)
145 TIGR01993 Pyr-5-nucltdase pyri 92.6 0.17 3.8E-06 39.1 4.0 39 70-111 143-181 (184)
146 PHA02597 30.2 hypothetical pro 92.2 0.19 4.1E-06 39.3 3.8 45 69-118 131-177 (197)
147 TIGR02252 DREG-2 REG-2-like, H 92.1 0.18 3.9E-06 39.5 3.6 36 71-109 163-199 (203)
148 TIGR01457 HAD-SF-IIA-hyp2 HAD- 91.6 0.38 8.2E-06 39.6 5.1 46 70-118 180-226 (249)
149 TIGR01548 HAD-SF-IA-hyp1 haloa 91.5 0.2 4.3E-06 39.3 3.2 34 70-106 163-196 (197)
150 PRK06698 bifunctional 5'-methy 91.3 0.95 2.1E-05 40.5 7.7 44 69-117 386-429 (459)
151 PRK10444 UMP phosphatase; Prov 91.1 0.37 8E-06 39.8 4.6 47 69-118 175-222 (248)
152 KOG0209 P-type ATPase [Inorgan 90.9 0.25 5.4E-06 47.7 3.7 34 90-124 808-841 (1160)
153 PHA02530 pseT polynucleotide k 90.9 0.46 1E-05 39.7 5.0 44 69-115 252-296 (300)
154 TIGR01452 PGP_euk phosphoglyco 90.4 0.42 9.1E-06 39.9 4.3 42 73-117 207-249 (279)
155 PLN02645 phosphoglycolate phos 89.7 0.6 1.3E-05 39.7 4.8 45 71-118 233-278 (311)
156 PF12689 Acid_PPase: Acid Phos 89.5 0.97 2.1E-05 35.5 5.5 55 58-117 99-153 (169)
157 PRK09449 dUMP phosphatase; Pro 89.5 0.65 1.4E-05 36.9 4.6 43 70-115 152-196 (224)
158 PRK10748 flavin mononucleotide 89.3 0.61 1.3E-05 37.9 4.4 45 70-117 165-210 (238)
159 TIGR02254 YjjG/YfnB HAD superf 88.4 0.73 1.6E-05 36.3 4.2 45 70-116 154-199 (224)
160 TIGR01681 HAD-SF-IIIC HAD-supe 88.4 0.71 1.5E-05 34.0 3.8 35 68-105 89-125 (128)
161 TIGR01458 HAD-SF-IIA-hyp3 HAD- 88.1 0.91 2E-05 37.5 4.7 45 70-117 181-226 (257)
162 TIGR01493 HAD-SF-IA-v2 Haloaci 88.1 0.58 1.3E-05 35.6 3.3 33 71-106 142-174 (175)
163 KOG1050 Trehalose-6-phosphate 86.1 7.5 0.00016 37.3 10.0 51 54-107 642-692 (732)
164 PLN02919 haloacid dehalogenase 85.8 2.9 6.3E-05 41.7 7.5 45 70-117 220-264 (1057)
165 TIGR01460 HAD-SF-IIA Haloacid 84.0 1.7 3.6E-05 35.4 4.2 43 70-115 190-234 (236)
166 COG0241 HisB Histidinol phosph 82.7 6.4 0.00014 31.3 6.9 97 19-118 45-152 (181)
167 COG0637 Predicted phosphatase/ 82.2 1.5 3.2E-05 35.4 3.2 40 75-117 149-188 (221)
168 KOG3085 Predicted hydrolase (H 81.8 2 4.4E-05 35.6 3.9 49 73-124 173-222 (237)
169 KOG0208 Cation transport ATPas 80.6 2 4.4E-05 42.2 3.9 52 69-130 840-891 (1140)
170 TIGR01459 HAD-SF-IIA-hyp4 HAD- 79.8 3.4 7.4E-05 33.5 4.6 40 72-114 199-240 (242)
171 PF06437 ISN1: IMP-specific 5' 79.0 16 0.00034 32.5 8.6 49 68-120 348-404 (408)
172 PRK11009 aphA acid phosphatase 78.5 2.7 5.9E-05 34.7 3.6 27 91-117 187-213 (237)
173 COG1011 Predicted hydrolase (H 78.2 4.1 8.9E-05 32.1 4.5 44 72-118 158-202 (229)
174 TIGR01663 PNK-3'Pase polynucle 77.6 9 0.00019 35.4 7.0 84 18-108 210-304 (526)
175 TIGR01672 AphA HAD superfamily 76.5 3.2 7E-05 34.2 3.5 25 91-115 187-211 (237)
176 KOG0205 Plasma membrane H+-tra 74.5 2.5 5.4E-05 40.2 2.6 55 69-131 572-626 (942)
177 TIGR01459 HAD-SF-IIA-hyp4 HAD- 73.4 13 0.00028 30.1 6.4 44 62-108 72-115 (242)
178 PF11019 DUF2608: Protein of u 71.8 5.3 0.00012 33.2 3.8 40 63-105 156-195 (252)
179 COG4359 Uncharacterized conser 71.1 1.8 4E-05 34.8 0.8 41 65-113 143-183 (220)
180 PF09949 DUF2183: Uncharacteri 67.4 29 0.00063 24.7 6.3 43 56-103 35-80 (100)
181 PTZ00445 p36-lilke protein; Pr 67.3 8.9 0.00019 31.4 4.0 52 64-118 157-208 (219)
182 smart00775 LNS2 LNS2 domain. T 64.8 49 0.0011 25.2 7.6 45 62-108 93-139 (157)
183 TIGR01533 lipo_e_P4 5'-nucleot 64.7 21 0.00045 30.0 5.9 31 66-103 173-203 (266)
184 COG2179 Predicted hydrolase of 63.6 6.8 0.00015 30.9 2.6 81 31-115 46-138 (175)
185 TIGR01658 EYA-cons_domain eyes 61.9 15 0.00033 30.8 4.5 56 65-124 210-265 (274)
186 COG0761 lytB 4-Hydroxy-3-methy 61.0 3.8 8.3E-05 34.9 0.8 102 4-120 140-250 (294)
187 COG4483 Uncharacterized protei 56.0 8.3 0.00018 25.6 1.6 27 73-106 6-32 (68)
188 TIGR02251 HIF-SF_euk Dullard-l 55.0 14 0.00031 28.2 3.1 24 85-108 109-132 (162)
189 COG4229 Predicted enolase-phos 54.7 60 0.0013 26.3 6.6 68 37-108 109-197 (229)
190 PRK10463 hydrogenase nickel in 52.5 1.2E+02 0.0025 26.0 8.5 69 36-116 91-162 (290)
191 PF01282 Ribosomal_S24e: Ribos 51.8 40 0.00088 23.2 4.7 32 61-95 3-37 (84)
192 KOG2882 p-Nitrophenyl phosphat 50.8 17 0.00037 31.2 3.1 48 72-122 228-276 (306)
193 COG3700 AphA Acid phosphatase 40.7 20 0.00043 28.9 1.9 27 91-117 187-213 (237)
194 TIGR01456 CECR5 HAD-superfamil 40.1 32 0.00068 29.3 3.2 31 87-117 262-293 (321)
195 PF07859 Abhydrolase_3: alpha/ 39.7 17 0.00037 28.0 1.4 29 70-98 52-80 (211)
196 PF06014 DUF910: Bacterial pro 38.1 14 0.0003 24.3 0.5 25 74-105 7-31 (62)
197 PRK01395 V-type ATP synthase s 32.5 1.3E+02 0.0028 21.5 4.9 63 89-153 4-66 (104)
198 PRK01178 rps24e 30S ribosomal 32.2 1.5E+02 0.0033 21.1 5.2 33 60-95 20-55 (99)
199 KOG4779 Predicted membrane pro 32.2 34 0.00075 23.1 1.7 23 76-101 26-48 (82)
200 KOG3424 40S ribosomal protein 31.5 1.3E+02 0.0029 22.4 4.8 32 61-95 25-59 (132)
201 PF13689 DUF4154: Domain of un 31.0 1.1E+02 0.0023 22.8 4.5 78 18-103 24-106 (145)
202 PF10113 Fibrillarin_2: Fibril 30.1 99 0.0021 28.1 4.7 85 62-150 199-297 (505)
203 KOG3109 Haloacid dehalogenase- 28.1 1.3E+02 0.0028 25.0 4.7 41 72-115 164-205 (244)
204 PF09883 DUF2110: Uncharacteri 26.9 2.8E+02 0.006 22.8 6.4 61 22-82 3-64 (225)
205 COG0657 Aes Esterase/lipase [L 25.8 73 0.0016 26.5 3.1 28 71-98 134-161 (312)
206 KOG3040 Predicted sugar phosph 24.9 38 0.00083 28.0 1.1 33 85-117 195-228 (262)
207 PF06616 BsuBI_PstI_RE: BsuBI/ 24.9 4.4E+02 0.0096 22.7 7.6 59 50-113 145-210 (306)
208 PF00220 Hormone_4: Neurohypop 24.5 31 0.00068 14.0 0.3 7 167-173 3-9 (9)
209 PF14336 DUF4392: Domain of un 24.3 32 0.00068 29.3 0.6 30 73-105 163-192 (291)
210 PTZ00071 40S ribosomal protein 23.7 2.4E+02 0.0053 21.2 5.2 34 59-95 24-61 (132)
211 KOG2914 Predicted haloacid-hal 22.3 1E+02 0.0022 25.2 3.1 30 85-115 165-195 (222)
212 TIGR03572 WbuZ glycosyl amidat 21.9 2.1E+02 0.0045 22.8 4.9 28 90-117 199-229 (232)
213 PF04558 tRNA_synt_1c_R1: Glut 21.3 29 0.00064 27.0 -0.2 34 143-177 84-118 (164)
214 PRK02228 V-type ATP synthase s 21.0 2.8E+02 0.0061 19.4 4.9 63 90-153 2-65 (100)
215 COG1058 CinA Predicted nucleot 20.6 76 0.0016 26.6 2.1 80 70-158 19-108 (255)
216 COG1219 ClpX ATP-dependent pro 20.1 3.9E+02 0.0085 23.7 6.4 94 56-157 96-203 (408)
No 1
>PLN02382 probable sucrose-phosphatase
Probab=99.96 E-value=4e-29 Score=220.01 Aligned_cols=161 Identities=77% Similarity=1.198 Sum_probs=143.9
Q ss_pred cccccCCCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEE
Q 048221 13 LQSETEQRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTL 92 (181)
Q Consensus 13 ~~~~~~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~i 92 (181)
+|++..+.++|++++.+++....+.+.+.+.+.+.|+.+.++.++++++||+|++++||+|+++|++++...|+++++++
T Consensus 119 ~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~i 198 (413)
T PLN02382 119 LQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTL 198 (413)
T ss_pred cCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEE
Confidence 56677789999999987766666778888888777778888889999999999999999999999999843478999999
Q ss_pred EEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhCCCCCCCCCccccccccc
Q 048221 93 VCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGLGPNVSPRDIRDFQKCKV 172 (181)
Q Consensus 93 a~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l~~~~~~~~~~~~~~~~~ 172 (181)
+||||.||++||+.++++||+|+||.+++|+.|.+++..++++|+++.++++||+++|++|.++++.+|+|+.||..||.
T Consensus 199 afGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~~~~~~~~~~~~~~~~~ 278 (413)
T PLN02382 199 VCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLGPNVSPRDVSDFLYGKL 278 (413)
T ss_pred EEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCCCCCChhhccccccccc
Confidence 99999999999999983499999999999998888888788889999999999999999999999999999999998875
Q ss_pred e
Q 048221 173 G 173 (181)
Q Consensus 173 ~ 173 (181)
.
T Consensus 279 ~ 279 (413)
T PLN02382 279 D 279 (413)
T ss_pred c
Confidence 4
No 2
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.94 E-value=7.5e-27 Score=193.22 Aligned_cols=121 Identities=21% Similarity=0.254 Sum_probs=103.9
Q ss_pred CCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 19 QRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
..+.|+.++..++..+++.+.+.+.+.. .+.++.+++.++||+|+++|||+|+++|++++ |++++++++||||.
T Consensus 149 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~ 222 (270)
T PRK10513 149 LQFPKVMMIDEPEILDAAIARIPAEVKE---RYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQE 222 (270)
T ss_pred CCceEEEEeCCHHHHHHHHHHhHHHhcC---cEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCch
Confidence 3678888776555555555555544433 47777888899999999999999999999999 99999999999999
Q ss_pred ccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 99 NDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 99 NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
||++||+.+| +||||+||.+++|+.|++++++++ ++||+++|+++++
T Consensus 223 NDi~Ml~~ag-~~vAm~NA~~~vK~~A~~vt~~n~---------~dGva~~i~~~~~ 269 (270)
T PRK10513 223 NDIAMIEYAG-VGVAMGNAIPSVKEVAQFVTKSNL---------EDGVAFAIEKYVL 269 (270)
T ss_pred hhHHHHHhCC-ceEEecCccHHHHHhcCeeccCCC---------cchHHHHHHHHhc
Confidence 9999999999 999999999999999999998764 9999999999874
No 3
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.94 E-value=1.4e-26 Score=192.34 Aligned_cols=126 Identities=25% Similarity=0.302 Sum_probs=106.8
Q ss_pred CCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 19 QRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
..+.|+.++.+++...++.+.+.+.+.. .+.+..++..++||+|+++|||+|+++|++++ |++++++++|||+.
T Consensus 141 ~~~~ki~~~~~~~~~~~~~~~l~~~~~~---~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~ 214 (272)
T PRK15126 141 HGVTKICFCGDHDDLTRLQIQLNEALGE---RAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAM 214 (272)
T ss_pred cCceEEEEECCHHHHHHHHHHHHHHhcC---CEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCH
Confidence 4688988877665555555555554432 46777788889999999999999999999999 99999999999999
Q ss_pred ccHHHHhCCCceEEEecCChHHHHHHhch--hcCCCCccccccCCcchHHHHHHHHhhCCCCCC
Q 048221 99 NDAELFSVPDIYGVMVSNSQEELLQWHAE--NAKDNPKIIHATERCAARIMQAIGKFGLGPNVS 160 (181)
Q Consensus 99 NDl~Ml~~a~~~~vam~Na~~~lk~~A~~--v~~~~~~~~~~~~~~~~Gv~~~l~~~~l~~~~~ 160 (181)
||++||+.+| +||||+||.+++|+.|++ ++++| +++||+++|++|+..+-+.
T Consensus 215 NDi~Ml~~ag-~~vAm~Na~~~vK~~A~~~~v~~~n---------~edGva~~l~~~~~~~~~~ 268 (272)
T PRK15126 215 NDREMLGSVG-RGFIMGNAMPQLRAELPHLPVIGHC---------RNQAVSHYLTHWLDYPHLP 268 (272)
T ss_pred HHHHHHHHcC-CceeccCChHHHHHhCCCCeecCCC---------cchHHHHHHHHHhcCCCCC
Confidence 9999999999 999999999999999986 66664 4999999999999776543
No 4
>PRK10976 putative hydrolase; Provisional
Probab=99.94 E-value=3.3e-26 Score=189.21 Aligned_cols=121 Identities=27% Similarity=0.395 Sum_probs=101.8
Q ss_pred CCceEEEEEec-chhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCC
Q 048221 19 QRPHKISFFVE-KFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDS 97 (181)
Q Consensus 19 ~~v~Ki~~~~~-~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs 97 (181)
..+.|+.++.. ++..+.+.+.+.+.+.. .+.++.+++.++||+|+++|||+|+++|++++ |++++++++||||
T Consensus 142 ~~i~ki~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~ 215 (266)
T PRK10976 142 DGVSKVFFTCDSHEKLLPLEQAINARWGD---RVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDG 215 (266)
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHHHhCC---cEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCC
Confidence 46788887653 34444444455444432 47777888899999999999999999999999 9999999999999
Q ss_pred cccHHHHhCCCceEEEecCChHHHHHHhc--hhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 98 GNDAELFSVPDIYGVMVSNSQEELLQWHA--ENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 98 ~NDl~Ml~~a~~~~vam~Na~~~lk~~A~--~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
.||++||+.+| +||||+||.+++|+.|+ +++++|+ ++||+++|+++++
T Consensus 216 ~NDi~Ml~~ag-~~vAm~NA~~~vK~~A~~~~v~~~n~---------edGVa~~l~~~~~ 265 (266)
T PRK10976 216 MNDAEMLSMAG-KGCIMGNAHQRLKDLLPELEVIGSNA---------DDAVPHYLRKLYL 265 (266)
T ss_pred cccHHHHHHcC-CCeeecCCcHHHHHhCCCCeecccCc---------hHHHHHHHHHHhh
Confidence 99999999999 99999999999999987 6777654 9999999999874
No 5
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.92 E-value=7.6e-25 Score=180.93 Aligned_cols=140 Identities=44% Similarity=0.753 Sum_probs=113.9
Q ss_pred ccccccCCCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeE
Q 048221 12 TLQSETEQRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANT 91 (181)
Q Consensus 12 ~~~~~~~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ 91 (181)
.+|++..++.+|++++.++.......+.|++.+...|+.+.++.|+++++||+|++++|+.|+++|++++ +++++++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~v 184 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQV 184 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHE
Confidence 3566677899999999877666666788999999999999999999999999999999999999999999 9999999
Q ss_pred EEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 92 LVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 92 ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
+++|||.||++||.... ++|+|+||.+++.+....-.....++|+++.+...||.++|++|.+
T Consensus 185 l~aGDSgND~~mL~~~~-~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 185 LVAGDSGNDLEMLEGGD-HGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp EEEESSGGGHHHHCCSS-EEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred EEEeCCCCcHHHHcCcC-CEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHHcCC
Confidence 99999999999999888 9999999999955443333445678999999999999999999864
No 6
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.92 E-value=1.3e-24 Score=174.67 Aligned_cols=118 Identities=27% Similarity=0.439 Sum_probs=106.7
Q ss_pred cCCCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC
Q 048221 17 TEQRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGD 96 (181)
Q Consensus 17 ~~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD 96 (181)
....+.|+.+..+++....+.+.+.+.+.. .+.+..++..++||+|+++|||+|+++|++++ |++++++++|||
T Consensus 137 ~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD 210 (254)
T PF08282_consen 137 EDEEIFKILFFPDPEDLEQLREELKKKFPN---LIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGD 210 (254)
T ss_dssp HCSSESEEEEESCHHHHHHHHHHHHHHHTT---TEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEES
T ss_pred ccccceeeeccccchhhhhhhhhhccccCc---ceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeec
Confidence 357899999888888888888888888765 35778889999999999999999999999999 999999999999
Q ss_pred CcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHH
Q 048221 97 SGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAI 150 (181)
Q Consensus 97 s~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l 150 (181)
|.||++||+.+| +||+|+||.++++++|++++++++ ++||+++|
T Consensus 211 ~~ND~~Ml~~~~-~~~am~na~~~~k~~a~~i~~~~~---------~~gv~~~i 254 (254)
T PF08282_consen 211 SENDIEMLELAG-YSVAMGNATPELKKAADYITPSNN---------DDGVAKAI 254 (254)
T ss_dssp SGGGHHHHHHSS-EEEEETTS-HHHHHHSSEEESSGT---------CTHHHHHH
T ss_pred ccccHhHHhhcC-eEEEEcCCCHHHHHhCCEEecCCC---------CChHHHhC
Confidence 999999999999 999999999999999999998764 69999886
No 7
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.92 E-value=1.6e-24 Score=179.01 Aligned_cols=120 Identities=28% Similarity=0.370 Sum_probs=99.5
Q ss_pred eEEEEEe-cchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCccc
Q 048221 22 HKISFFV-EKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGND 100 (181)
Q Consensus 22 ~Ki~~~~-~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ND 100 (181)
.++..+. ..+..++..+.+.+.+... ...+.++...++||+|+++|||.|+++|++++ |+++++++|||||.||
T Consensus 143 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND 217 (264)
T COG0561 143 NKIIALDKDHEILEELVEALRKRFPDL--GLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTND 217 (264)
T ss_pred ceEEEEecChHhHHHHHHHHhhhcccc--ceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCcccc
Confidence 3444433 4555666666677666542 35555665666999999999999999999999 9999999999999999
Q ss_pred HHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhCC
Q 048221 101 AELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGLG 156 (181)
Q Consensus 101 l~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l~ 156 (181)
++||+.+| +||||+||.|++|+.|++++.+++ ++||+++|+++++.
T Consensus 218 ~~Ml~~ag-~gvam~Na~~~~k~~A~~vt~~n~---------~~Gv~~~l~~~~~~ 263 (264)
T COG0561 218 IEMLEVAG-LGVAMGNADEELKELADYVTTSND---------EDGVAEALEKLLLL 263 (264)
T ss_pred HHHHHhcC-eeeeccCCCHHHHhhCCcccCCcc---------chHHHHHHHHHhcc
Confidence 99999999 999999999999999997777754 99999999999865
No 8
>PLN02887 hydrolase family protein
Probab=99.92 E-value=1.3e-24 Score=197.87 Aligned_cols=121 Identities=21% Similarity=0.337 Sum_probs=103.1
Q ss_pred CCceEEEEEecchh-HHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCC
Q 048221 19 QRPHKISFFVEKFK-AFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDS 97 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~-~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs 97 (181)
..+.|+.++..++. ...+.+.+.+.+.. .+.++.++..++||+|+++|||+|+++|++++ |+++++++|||||
T Consensus 459 ~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~---~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~eeviAFGDs 532 (580)
T PLN02887 459 ADIQKVIFLDTAEGVSSVLRPYWSEATGD---RANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDEIMAIGDG 532 (580)
T ss_pred cCeeEEEEEcChHHHHHHHHHHHHHHhcC---cEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHHEEEEecc
Confidence 46888888765432 23334445444433 57888888899999999999999999999999 9999999999999
Q ss_pred cccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 98 GNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 98 ~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
.||++||+.+| +||||+||.+++|++|++++++|+ ++||+++|++|++
T Consensus 533 ~NDIeMLe~AG-~gVAMgNA~eeVK~~Ad~VT~sNd---------EDGVA~aLek~~~ 580 (580)
T PLN02887 533 ENDIEMLQLAS-LGVALSNGAEKTKAVADVIGVSND---------EDGVADAIYRYAF 580 (580)
T ss_pred hhhHHHHHHCC-CEEEeCCCCHHHHHhCCEEeCCCC---------cCHHHHHHHHhhC
Confidence 99999999999 999999999999999999998765 9999999999864
No 9
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.92 E-value=9.4e-24 Score=173.70 Aligned_cols=137 Identities=59% Similarity=0.952 Sum_probs=117.6
Q ss_pred cccccCCCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEE
Q 048221 13 LQSETEQRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTL 92 (181)
Q Consensus 13 ~~~~~~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~i 92 (181)
+++...++++|++++..++......+.+.+.+...+..+.++.++.+++||+|++++|+.|+++|++++ |+++++++
T Consensus 111 ~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i 187 (249)
T TIGR01485 111 PQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTL 187 (249)
T ss_pred cCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEE
Confidence 344446789999998876655555677788887777778888889999999999999999999999999 99999999
Q ss_pred EEeCCcccHHHHhC-CCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 93 VCGDSGNDAELFSV-PDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 93 a~GDs~NDl~Ml~~-a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
+|||+.||++||+. ++ ++|+|+||.+++|+.++.. ..+++|++...+++||+++|++|.+
T Consensus 188 ~~GD~~ND~~ml~~~~~-~~va~~na~~~~k~~~~~~--~~~~~~~~~~~~~~Gi~e~l~~~~~ 248 (249)
T TIGR01485 188 VCGDSGNDIELFEIGSV-RGVIVSNAQEELLQWYDEN--AKDKIYHASERCAGGIIEAIAHFDL 248 (249)
T ss_pred EEECChhHHHHHHccCC-cEEEECCCHHHHHHHHHhc--ccCcEEEecCCCcHHHHHHHHHcCC
Confidence 99999999999998 67 8999999999999765322 3557899999999999999999875
No 10
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.89 E-value=2.6e-22 Score=163.65 Aligned_cols=126 Identities=35% Similarity=0.522 Sum_probs=103.7
Q ss_pred CCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 19 QRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
++.+|+.++..++... ..+.+.+.+...+..+.+..++++++||+|++++|+.|+++|++++ |++++++++||||.
T Consensus 110 ~~~~~i~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~ 185 (236)
T TIGR02471 110 QGPFKISYLLDPEGEP-ILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSG 185 (236)
T ss_pred CCCeeEEEEECcccch-HHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCc
Confidence 5789999987654222 2345555666655567777888899999999999999999999999 99999999999999
Q ss_pred ccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 99 NDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 99 NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
||++||+.++ +||+|+||.+++|+.|+. +++|+++.++++||+++|+++.
T Consensus 186 nD~~ml~~~~-~~iav~na~~~~k~~a~~-----~~~~v~~~~~~~Gv~~~i~~~~ 235 (236)
T TIGR02471 186 NDEEMLRGLT-LGVVVGNHDPELEGLRHQ-----QRIYFANNPHAFGILEGINHYD 235 (236)
T ss_pred cHHHHHcCCC-cEEEEcCCcHHHHHhhcC-----CcEEEcCCCChhHHHHHHHhhC
Confidence 9999999999 999999999999999861 2334444567999999999875
No 11
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.88 E-value=2.1e-22 Score=162.68 Aligned_cols=101 Identities=34% Similarity=0.495 Sum_probs=87.7
Q ss_pred HHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHH
Q 048221 41 SERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEE 120 (181)
Q Consensus 41 ~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~ 120 (181)
.+.++..+..+.+..+ ..++||+|++++|++|++++++++ |++++++++||||.||++||+.+| ++|+|+||.++
T Consensus 130 ~~~l~~~~~~~~~~~~-~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag-~~vam~Na~~~ 204 (230)
T PRK01158 130 RELLEELGLDLEIVDS-GFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAG-FGVAVANADEE 204 (230)
T ss_pred HHHHHHcCCcEEEEec-ceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcC-ceEEecCccHH
Confidence 3334444434555555 468999999999999999999999 999999999999999999999999 99999999999
Q ss_pred HHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 121 LLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 121 lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
+|+.|++++++|+ ++||+++|+++++
T Consensus 205 vk~~a~~v~~~n~---------~~Gv~~~l~~~~~ 230 (230)
T PRK01158 205 LKEAADYVTEKSY---------GEGVAEAIEHLLL 230 (230)
T ss_pred HHHhcceEecCCC---------cChHHHHHHHHhC
Confidence 9999999988754 9999999999874
No 12
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.87 E-value=8.5e-22 Score=162.62 Aligned_cols=92 Identities=23% Similarity=0.263 Sum_probs=84.8
Q ss_pred EEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcC
Q 048221 51 VKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAK 130 (181)
Q Consensus 51 ~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~ 130 (181)
+.++.++..++||++++++|+.|++++++++ |++++++++||||.||++||+.+| +||+|+||.+++|+.|+++++
T Consensus 181 ~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi~m~~~ag-~~vamgna~~~lk~~Ad~v~~ 256 (272)
T PRK10530 181 LECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDISMLEAAG-LGVAMGNADDAVKARADLVIG 256 (272)
T ss_pred ceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhHHHHHhcC-ceEEecCchHHHHHhCCEEEe
Confidence 4455666788999999999999999999999 999999999999999999999999 899999999999999999988
Q ss_pred CCCccccccCCcchHHHHHHHHhhC
Q 048221 131 DNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 131 ~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
+++ ++||+++|+++++
T Consensus 257 ~n~---------~dGv~~~l~~~~l 272 (272)
T PRK10530 257 DNT---------TPSIAEFIYSHVL 272 (272)
T ss_pred cCC---------CCcHHHHHHHHhC
Confidence 764 9999999999864
No 13
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.86 E-value=1.4e-21 Score=157.25 Aligned_cols=85 Identities=39% Similarity=0.686 Sum_probs=78.3
Q ss_pred EcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCcc
Q 048221 56 SSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKI 135 (181)
Q Consensus 56 s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~ 135 (181)
++..++||+|++++|++|++++++++ |++++++++|||+.||++||+.+| ++|+|+||.+++|+.|++++.++.
T Consensus 136 ~~~~~~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag-~~vam~Na~~~~k~~A~~vt~~~~-- 209 (225)
T TIGR01482 136 DSGFDIHILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPG-FGVAVANAQPELKEWADYVTESPY-- 209 (225)
T ss_pred cCCcEEEEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcC-ceEEcCChhHHHHHhcCeecCCCC--
Confidence 55679999999999999999999999 999999999999999999999999 999999999999999999988754
Q ss_pred ccccCCcchH----HHHHHHHh
Q 048221 136 IHATERCAAR----IMQAIGKF 153 (181)
Q Consensus 136 ~~~~~~~~~G----v~~~l~~~ 153 (181)
++| ++++|++|
T Consensus 210 -------~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 210 -------GEGGAEAIGEILQAI 224 (225)
T ss_pred -------CCcHHHHHHHHHHhh
Confidence 889 66666665
No 14
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.86 E-value=1.4e-21 Score=160.87 Aligned_cols=115 Identities=24% Similarity=0.376 Sum_probs=94.3
Q ss_pred CceEEEEEecchhHHHHHHHHHH-HHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 20 RPHKISFFVEKFKAFAIMKALSE-RLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 20 ~v~Ki~~~~~~~~~~~~~~~i~~-~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
.+.|+.++.+++..+++.+.+.+ .+. ..+.+..++..++||+|++++|+.|++++++++ +++++++++||||.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~ 214 (256)
T TIGR00099 141 ILKILLLFLDPEDLDLLIEALNKLELE---ENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGM 214 (256)
T ss_pred cceEEEEECCHHHHHHHHHHhhhhhhc---CCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcH
Confidence 35555555555444444444442 222 247777888899999999999999999999999 99999999999999
Q ss_pred ccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHH
Q 048221 99 NDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAI 150 (181)
Q Consensus 99 NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l 150 (181)
||++||+.+| ++++|+||++++|+.|++++++++ ++||+++|
T Consensus 215 nD~~m~~~~~-~~~a~~na~~~~k~~a~~~~~~n~---------~dGV~~~l 256 (256)
T TIGR00099 215 NDIEMLEAAG-YGVAMGNADEELKALADYVTDSNN---------EDGVALAL 256 (256)
T ss_pred HhHHHHHhCC-ceeEecCchHHHHHhCCEEecCCC---------CcchhhhC
Confidence 9999999999 999999999999999999988754 89998864
No 15
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.86 E-value=1.8e-21 Score=162.00 Aligned_cols=118 Identities=23% Similarity=0.314 Sum_probs=87.9
Q ss_pred ceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCC---CCCeEEEEeCC
Q 048221 21 PHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGK---VPANTLVCGDS 97 (181)
Q Consensus 21 v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i---~~~~~ia~GDs 97 (181)
..|+.+..+++.. ..+.+.+... .++++. +..++||+|+++|||+|+++|++++ |+ ++++++|||||
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~l~~~--~~~~~~-~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs 215 (271)
T PRK03669 146 SVTLIWRDSDERM----AQFTARLAEL--GLQFVQ-GARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDG 215 (271)
T ss_pred CceeEecCCHHHH----HHHHHHHHHC--CCEEEe-cCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCC
Confidence 4555544443333 3344445443 355554 4468999999999999999999999 99 99999999999
Q ss_pred cccHHHHhCCCceEEEecCChHH---HHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 98 GNDAELFSVPDIYGVMVSNSQEE---LLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 98 ~NDl~Ml~~a~~~~vam~Na~~~---lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
.||++||+.+| +||||+|+.++ ++.. .....|+++..+++||.+++++++.
T Consensus 216 ~NDi~Ml~~ag-~gvAM~~~~~~~~~l~~~------~~~~~~~~~~~~~~g~~~~l~~~~~ 269 (271)
T PRK03669 216 PNDAPLLDVMD-YAVVVKGLNREGVHLQDD------DPARVYRTQREGPEGWREGLDHFFS 269 (271)
T ss_pred HHHHHHHHhCC-EEEEecCCCCCCcccccc------cCCceEeccCCCcHHHHHHHHHHHh
Confidence 99999999999 99999988742 2211 1123355566789999999999974
No 16
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.84 E-value=9.8e-21 Score=156.20 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=90.4
Q ss_pred CceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCC--CCeEEEEeCC
Q 048221 20 RPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKV--PANTLVCGDS 97 (181)
Q Consensus 20 ~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~--~~~~ia~GDs 97 (181)
...|+.+. .++.. +.+.+.+.+.+ +.++.+ ..++||+|++++|+.|+++|++++ |++ .+++++||||
T Consensus 135 ~~~~~~~~-~~~~~----~~~~~~~~~~~--~~~~~s-~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~ 203 (256)
T TIGR01486 135 EYSETILW-SEERR----ERFTEALVELG--LEVTHG-NRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDS 203 (256)
T ss_pred ccCCceec-ChHHH----HHHHHHHHHcC--CEEEeC-CceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCC
Confidence 35555555 33333 34444454443 455554 579999999999999999999999 999 9999999999
Q ss_pred cccHHHHhCCCceEEEecCCh---HHHHHH--h-chhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 98 GNDAELFSVPDIYGVMVSNSQ---EELLQW--H-AENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 98 ~NDl~Ml~~a~~~~vam~Na~---~~lk~~--A-~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
.||++||+.+| ++|||+||. +++|+. | +++++++ +++||+++|++|+
T Consensus 204 ~ND~~Ml~~ag-~~vam~Na~~~~~~lk~~~~a~~~vt~~~---------~~dGva~~l~~~~ 256 (256)
T TIGR01486 204 PNDLPLLEVVD-LAVVVPGPNGPNVSLKPGDPGSFLLTPAP---------GPEGWREALEHLL 256 (256)
T ss_pred HhhHHHHHHCC-EEEEeCCCCCCccccCccCCCcEEEcCCC---------CcHHHHHHHHHhC
Confidence 99999999999 999999998 578887 4 4777664 4999999999975
No 17
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.82 E-value=7.8e-20 Score=146.98 Aligned_cols=94 Identities=28% Similarity=0.481 Sum_probs=81.5
Q ss_pred HHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHH
Q 048221 41 SERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEE 120 (181)
Q Consensus 41 ~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~ 120 (181)
.+.++..+ +.+..+ ..++||+|.+++|++|++++++++ |++.+++++||||.||++||+.+| ++|+|+||.++
T Consensus 122 ~~~l~~~~--~~~~~~-~~~~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag-~~vam~na~~~ 194 (215)
T TIGR01487 122 REIIKERG--LNLVDS-GFAIHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVG-FKVAVANADDQ 194 (215)
T ss_pred HHHHHhCC--eEEEec-CceEEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCC-CeEEcCCccHH
Confidence 33444433 554444 678999999999999999999999 999999999999999999999999 99999999999
Q ss_pred HHHHhchhcCCCCccccccCCcchHHHHHH
Q 048221 121 LLQWHAENAKDNPKIIHATERCAARIMQAI 150 (181)
Q Consensus 121 lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l 150 (181)
+|+.|+++++++. ++||+++|
T Consensus 195 ~k~~A~~v~~~~~---------~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIADYVTSNPY---------GEGVVEVL 215 (215)
T ss_pred HHHhCCEEcCCCC---------CchhhhhC
Confidence 9999999988654 89999864
No 18
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.80 E-value=2.9e-19 Score=148.95 Aligned_cols=102 Identities=25% Similarity=0.320 Sum_probs=84.4
Q ss_pred HHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCC-CeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 38 KALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVP-ANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 38 ~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~-~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
+.+.+.++..+ +.+.. +++++||+|.+ +|+.|++++++++ |+++ +++++||||.||++||+.+| ++++|+|
T Consensus 163 ~~~~~~l~~~~--~~~~~-~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag-~~vam~N 234 (273)
T PRK00192 163 ERFEEALKRLG--LKVTR-GGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAAD-IAVVVPG 234 (273)
T ss_pred HHHHHHHHHcC--CEEEE-CCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCC-eeEEeCC
Confidence 44445554544 44444 46899999999 9999999999999 9999 99999999999999999999 9999999
Q ss_pred ChHHHH----HHh-chhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 117 SQEELL----QWH-AENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 117 a~~~lk----~~A-~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
|.+++| +.| +.++ ++..++++||+++|++++
T Consensus 235 A~~~~k~~~~~~a~~~v~-------~~~~~~~~Gv~~~l~~~~ 270 (273)
T PRK00192 235 PDGPNPPLLPGIADGEFI-------LASAPGPEGWAEAINKLL 270 (273)
T ss_pred CCCCCcccCccccCCceE-------EecCCCcHHHHHHHHHHH
Confidence 999999 554 3443 334567999999999986
No 19
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.68 E-value=1.9e-16 Score=145.59 Aligned_cols=118 Identities=17% Similarity=0.194 Sum_probs=93.2
Q ss_pred CceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEE--eCC
Q 048221 20 RPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVC--GDS 97 (181)
Q Consensus 20 ~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~--GDs 97 (181)
...|+.+..+++.++++ .+.+++.+ +++.. +++|+||+ +++|||+|+++|++.+ +++.+++++| |||
T Consensus 572 ~seKIl~~gd~e~Leel----~~~L~~~~--l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs 640 (694)
T PRK14502 572 YSETVHIEGDKRSTNIV----LNHIQQSG--LEYSF-GGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDS 640 (694)
T ss_pred CceeEEEcCCHHHHHHH----HHHHHHcC--cEEEE-CCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCc
Confidence 45688887766555444 44444443 45444 89999999 5999999999999999 9999999999 999
Q ss_pred cccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 98 GNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 98 ~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
.||++||+.+| +||+|++.......+ ..++..++...++.||.+++++++.
T Consensus 641 ~NDisMLe~Ag-~gVAM~~~~~~~~~l------~~~~~~~~~~~GP~GW~eai~~~L~ 691 (694)
T PRK14502 641 ENDYSMLETVD-SPILVQRPGNKWHKM------RLRNPSYVKGVGPEGFSRAVTDIIL 691 (694)
T ss_pred HhhHHHHHhCC-ceEEEcCCCCCCCcc------CCCCceecCCCCcHHHHHHHHHHHh
Confidence 99999999999 999999877655433 1233347788999999999999874
No 20
>PTZ00174 phosphomannomutase; Provisional
Probab=99.56 E-value=1.9e-14 Score=118.52 Aligned_cols=86 Identities=24% Similarity=0.410 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC----CcccHHHHhCCCc
Q 048221 34 FAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGD----SGNDAELFSVPDI 109 (181)
Q Consensus 34 ~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD----s~NDl~Ml~~a~~ 109 (181)
.++.+.+.+.+.+ +.+....++..++||+|+++|||+||++|+++. ++++|||| +.||++||+.++.
T Consensus 155 ~~~~~~l~~~~~~--~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~~-------~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 155 EKFIQDLKKEFSD--LGLKFSIGGQISFDVFPKGWDKTYCLRHLENDF-------KEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHHHHHhcCC--CCeEEEecCceEEEeeeCCCcHHHHHHHHHhhh-------hhEEEEcccCCCCCCcHhhhhcCCC
Confidence 4445555554432 233333334579999999999999999999884 79999999 9999999997643
Q ss_pred eEEEecCChHHHHHHhchh
Q 048221 110 YGVMVSNSQEELLQWHAEN 128 (181)
Q Consensus 110 ~~vam~Na~~~lk~~A~~v 128 (181)
.|+.++||.|.+|.+|..+
T Consensus 226 ~g~~v~n~~~~~~~~~~~~ 244 (247)
T PTZ00174 226 IGHSVKNPEDTIKILKELF 244 (247)
T ss_pred ceEEeCCHHHHHHHHHHHh
Confidence 5677889999999987654
No 21
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.55 E-value=2.1e-14 Score=115.55 Aligned_cols=71 Identities=25% Similarity=0.419 Sum_probs=60.0
Q ss_pred HHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 38 KALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 38 ~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
+.+.+.+.+.+ +.+.. ++.++||+|++++|+.|++++++++ |++++++++||||.||++||+.+| +|||+.
T Consensus 151 ~~~~~~l~~~~--~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag-~~va~~ 221 (221)
T TIGR02463 151 PRFTALLADLG--LAIVQ-GNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVAD-YAVVIK 221 (221)
T ss_pred HHHHHHHHHcC--CeEEe-cCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCC-ceEEeC
Confidence 34444454444 44444 4789999999999999999999999 999999999999999999999999 999974
No 22
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.49 E-value=2e-13 Score=114.00 Aligned_cols=84 Identities=15% Similarity=0.214 Sum_probs=72.3
Q ss_pred EEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC----CceEEEecCChHHHHHHhchh
Q 048221 53 LIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP----DIYGVMVSNSQEELLQWHAEN 128 (181)
Q Consensus 53 ~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a----~~~~vam~Na~~~lk~~A~~v 128 (181)
.+.++..++||.|++++||.|++++++++ +++.+++++|||+.||++||+.+ + ++|+|+|+.+. |.+.
T Consensus 158 ~~~~g~~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~~g-~~vavg~a~~~----A~~~ 229 (266)
T PRK10187 158 ALQPGKCVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRLGG-ISVKVGTGATQ----ASWR 229 (266)
T ss_pred EEeCCCEEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhcCC-eEEEECCCCCc----CeEe
Confidence 34578899999999999999999999999 99999999999999999999999 9 99999999754 3333
Q ss_pred cCCCCccccccCCcchHHHHHHHHhhC
Q 048221 129 AKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 129 ~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
.. +.++|..+|..+..
T Consensus 230 l~-----------~~~~v~~~L~~l~~ 245 (266)
T PRK10187 230 LA-----------GVPDVWSWLEMITT 245 (266)
T ss_pred CC-----------CHHHHHHHHHHHHH
Confidence 32 37889988888763
No 23
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.46 E-value=4.4e-13 Score=113.08 Aligned_cols=110 Identities=14% Similarity=0.074 Sum_probs=82.3
Q ss_pred HHHHHhcCCcEEEEEEcCcEEEEee------------------C---CCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcc
Q 048221 41 SERLEERGLDVKLIFSSGMALDVLP------------------K---GAGKGQALAYVLKKFKIDGKVPANTLVCGDSGN 99 (181)
Q Consensus 41 ~~~~~~~g~~~~~~~s~~~~leI~~------------------~---~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~N 99 (181)
++.+.+.|+++ ..|++|++++. . +++||+|+++|.+.|.... ..-.++++|||+|
T Consensus 162 ~~~~~~~g~~~---~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~-~~~~tiaLGDspN 237 (302)
T PRK12702 162 REAFAQQEANL---TQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL-GPIKALGIGCSPP 237 (302)
T ss_pred HHHHHHcCCeE---EecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc-CCceEEEecCChh
Confidence 55666766444 37899999998 6 8999999999999995322 3458999999999
Q ss_pred cHHHHhCCCceEEEecCChHHHH-HHhchh--cCCCCccccccCCcchHHHHHHHHhhC
Q 048221 100 DAELFSVPDIYGVMVSNSQEELL-QWHAEN--AKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 100 Dl~Ml~~a~~~~vam~Na~~~lk-~~A~~v--~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
|++||++++ ++|++.+....-. +.|-.+ .+.....++++.+++.||.+++.+++.
T Consensus 238 D~~mLe~~D-~~vvi~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~GP~GW~e~v~~~l~ 295 (302)
T PRK12702 238 DLAFLRWSE-QKVVLPSPIADSLWKEALRLGGPEVQPQWQLAQLPGPEGWNEVVLMWLE 295 (302)
T ss_pred hHHHHHhCC-eeEEecCCCCCCcccccccccCcccCccceecCCCCcHHHHHHHHHHHH
Confidence 999999999 9999986644322 111111 112233458889999999999999874
No 24
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.43 E-value=8.3e-13 Score=104.94 Aligned_cols=61 Identities=39% Similarity=0.645 Sum_probs=57.4
Q ss_pred cEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEe
Q 048221 50 DVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMV 114 (181)
Q Consensus 50 ~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam 114 (181)
.+.++.++..++||+|++++|+.|++++++++ +++++++++|||+.||++||+.++ ++|+|
T Consensus 144 ~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~-~~vam 204 (204)
T TIGR01484 144 ELEAIYVGKTDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAG-LAVAV 204 (204)
T ss_pred cEEEEEecCCEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcC-CceEC
Confidence 46666688999999999999999999999999 999999999999999999999999 89997
No 25
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.41 E-value=1.1e-12 Score=103.02 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=66.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchH-HH
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAAR-IM 147 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~G-v~ 147 (181)
.|-..++.+++++ +++++++++|||+.||++|++.+| .+++|+||.+.+++.|++++..+. ++| +.
T Consensus 82 pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag-~~~am~nA~~~lk~~A~~I~~~~~---------~~g~v~ 148 (169)
T TIGR02726 82 KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVG-LAVAVGDAVADVKEAAAYVTTARG---------GHGAVR 148 (169)
T ss_pred CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCC-CeEECcCchHHHHHhCCEEcCCCC---------CCCHHH
Confidence 6788999999999 999999999999999999999999 899999999999999999887643 555 56
Q ss_pred HHHHHhhCCCC
Q 048221 148 QAIGKFGLGPN 158 (181)
Q Consensus 148 ~~l~~~~l~~~ 158 (181)
+.++.++...|
T Consensus 149 e~~e~il~~~~ 159 (169)
T TIGR02726 149 EVAELILKAQG 159 (169)
T ss_pred HHHHHHHHhcC
Confidence 66666664433
No 26
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.33 E-value=6.2e-12 Score=96.83 Aligned_cols=80 Identities=16% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHH
Q 048221 67 GAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARI 146 (181)
Q Consensus 67 ~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv 146 (181)
.-+|..+++.+++++ ++++++++++|||.||++|++.+| .+++|.|+.+.++..|++++.++. ++.|+
T Consensus 74 ~~~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag-~~~~v~~~~~~~~~~a~~i~~~~~--------~~g~~ 141 (154)
T TIGR01670 74 QSNKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVG-LSVAVADAHPLLIPRADYVTRIAG--------GRGAV 141 (154)
T ss_pred ccchHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCC-CeEecCCcCHHHHHhCCEEecCCC--------CCcHH
Confidence 358999999999999 999999999999999999999999 899999999999999998887653 35569
Q ss_pred HHHHHHhhCCCC
Q 048221 147 MQAIGKFGLGPN 158 (181)
Q Consensus 147 ~~~l~~~~l~~~ 158 (181)
+++++.++...|
T Consensus 142 ~~~~~~~~~~~~ 153 (154)
T TIGR01670 142 REVCELLLLAQG 153 (154)
T ss_pred HHHHHHHHHhhC
Confidence 999999986543
No 27
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.33 E-value=2.3e-12 Score=105.06 Aligned_cols=85 Identities=25% Similarity=0.317 Sum_probs=64.0
Q ss_pred CCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCC--CCCeEEEEeC
Q 048221 19 QRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGK--VPANTLVCGD 96 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i--~~~~~ia~GD 96 (181)
....|+.++.+++...++.+.+ ++. .+++..+ ..++++ ++++||+.|++++++.+ ++ +.+++++|||
T Consensus 139 ~~~~ki~~~~~~e~~~~~~~~~----~~~--~~~~~~s-~~~~~i-~~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD 207 (225)
T TIGR02461 139 REYSETIFLWSREGWEAILVTA----RAR--GLKYTHG-GRFYTV-HGGSDKGKAIKRLLDLY---KLRPGAIESVGLGD 207 (225)
T ss_pred hhcCCcccCCCHHHHHHHHHHH----HHc--CCcEEEC-CEEEEE-CCCCCHHHHHHHHHHHh---ccccCcccEEEEcC
Confidence 3566776666665555544444 333 3555555 555775 55999999999999999 66 6668999999
Q ss_pred CcccHHHHhCCCceEEEec
Q 048221 97 SGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 97 s~NDl~Ml~~a~~~~vam~ 115 (181)
+.||++||+.+| ++|+++
T Consensus 208 ~~nD~~ml~~ag-~~v~v~ 225 (225)
T TIGR02461 208 SENDFPMFEVVD-LAFLVG 225 (225)
T ss_pred CHHHHHHHHhCC-CcEecC
Confidence 999999999999 999985
No 28
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.32 E-value=1.5e-11 Score=118.06 Aligned_cols=138 Identities=26% Similarity=0.373 Sum_probs=104.2
Q ss_pred ccccccCCCceEEEEEecchhHHHHHHHHHHHHHhcCCcEEEEEEcC-cEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCe
Q 048221 12 TLQSETEQRPHKISFFVEKFKAFAIMKALSERLEERGLDVKLIFSSG-MALDVLPKGAGKGQALAYVLKKFKIDGKVPAN 90 (181)
Q Consensus 12 ~~~~~~~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~s~~-~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~ 90 (181)
.+|++..|+.+|++++..+.......+.+++.++..|++++++.+.+ .+++|+|..+||++||++|+.++ |++.++
T Consensus 898 ~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~ 974 (1050)
T TIGR02468 898 VEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELAN 974 (1050)
T ss_pred eecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHH
Confidence 46777789999999985443334456888999999999999887764 99999999999999999999999 999999
Q ss_pred EEE-EeCCcc-cHH-HHhCCCceEEEecC----ChHHHHHHhch----hcC-CCCccc-cccCCcchHHHHHHHHh
Q 048221 91 TLV-CGDSGN-DAE-LFSVPDIYGVMVSN----SQEELLQWHAE----NAK-DNPKII-HATERCAARIMQAIGKF 153 (181)
Q Consensus 91 ~ia-~GDs~N-Dl~-Ml~~a~~~~vam~N----a~~~lk~~A~~----v~~-~~~~~~-~~~~~~~~Gv~~~l~~~ 153 (181)
+++ +|||.| |++ ||.... .+|++.- ++..+...-.| |.+ ..++|. +..++..+.|..+|+++
T Consensus 975 v~VfaGdSGntD~e~Ll~G~~-~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspni~~~~~~~~~~di~~aL~~l 1049 (1050)
T TIGR02468 975 MAVFVGESGDTDYEGLLGGLH-KTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKL 1049 (1050)
T ss_pred eEEEeccCCCCCHHHHhCCce-eEEEEecccccchhhhcccCCCcccccccCCCCCeEeecCCCCHHHHHHHHHhc
Confidence 966 999999 966 776777 8888875 44444311111 222 234454 33466777888888875
No 29
>PLN02423 phosphomannomutase
Probab=99.29 E-value=1.6e-11 Score=101.40 Aligned_cols=81 Identities=22% Similarity=0.370 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC----CcccHHHHhCC
Q 048221 32 KAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGD----SGNDAELFSVP 107 (181)
Q Consensus 32 ~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD----s~NDl~Ml~~a 107 (181)
..++..+.+.+.+.+ +.+..+.+|..++||+++++|||.||+.|+ ++++++|||| +.||++||+..
T Consensus 154 ~~~~~~~~l~~~~~~--~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~ 223 (245)
T PLN02423 154 IRPKMVSVLREKFAH--LNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESE 223 (245)
T ss_pred HHHHHHHHHHHhCCC--CcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCC
Confidence 344555666665532 345555566689999999999999999996 5789999999 89999999986
Q ss_pred CceEEEecCChHHHH
Q 048221 108 DIYGVMVSNSQEELL 122 (181)
Q Consensus 108 ~~~~vam~Na~~~lk 122 (181)
|+.++.|.+..+-..
T Consensus 224 ~~~~~~~~~~~~~~~ 238 (245)
T PLN02423 224 RTIGHTVTSPDDTRE 238 (245)
T ss_pred CcceEEeCCHHHHHH
Confidence 767888886655443
No 30
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.27 E-value=2.6e-11 Score=104.01 Aligned_cols=69 Identities=13% Similarity=0.215 Sum_probs=62.4
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHH
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIM 147 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~ 147 (181)
..|..+++.+++++ |++++++++||||.||++|++.+| .+|+| ||.|.+++.|+..+.++ +-+|+.
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AG-lgiA~-nAkp~Vk~~Ad~~i~~~---------~l~~~l 312 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAG-LGIAY-HAKPKVNEQAQVTIRHA---------DLMGVL 312 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCC-CeEEe-CCCHHHHhhCCEEecCc---------CHHHHH
Confidence 48999999999999 999999999999999999999999 89999 99999999999888654 367777
Q ss_pred HHH
Q 048221 148 QAI 150 (181)
Q Consensus 148 ~~l 150 (181)
..+
T Consensus 313 ~~~ 315 (322)
T PRK11133 313 CIL 315 (322)
T ss_pred HHh
Confidence 654
No 31
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.19 E-value=9e-11 Score=95.07 Aligned_cols=113 Identities=27% Similarity=0.343 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCe-EEEEeCCcccHHHHhCCCceEEE
Q 048221 35 AIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPAN-TLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 35 ~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~-~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
....++...+.+.|+.+ ..+.+|..+......||.|++++++.++ -.+..+ +++.|||.||.|||+..+ ++|.
T Consensus 160 ~~~~~~~~~L~e~glt~---v~garf~~v~~as~gKg~Aa~~ll~~y~--rl~~~r~t~~~GDg~nD~Pl~ev~d-~Afi 233 (274)
T COG3769 160 ERMAQFTARLNERGLTF---VHGARFWHVLDASAGKGQAANWLLETYR--RLGGARTTLGLGDGPNDAPLLEVMD-YAFI 233 (274)
T ss_pred hHHHHHHHHHHhcCceE---EeccceEEEeccccCccHHHHHHHHHHH--hcCceeEEEecCCCCCcccHHHhhh-hhee
Confidence 34567788888887665 3678999999999999999999999997 455556 999999999999999999 9999
Q ss_pred ecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhCC
Q 048221 114 VSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGLG 156 (181)
Q Consensus 114 m~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l~ 156 (181)
|++-..+--+. +.+....+++....+.+||.+.+++++..
T Consensus 234 V~~lnre~~~l---v~~i~~vv~~~~~~~~~~~~e~~~~~~~~ 273 (274)
T COG3769 234 VKGLNREGVHL---VSSIPAVVERIQREGPEGWREGLDHFFSA 273 (274)
T ss_pred ecccchhhhhc---cccchhheeeccccCchHHHHHhhhhccC
Confidence 99776654433 44555667788888999999999998754
No 32
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.18 E-value=2.5e-11 Score=93.44 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=71.1
Q ss_pred EeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCc
Q 048221 63 VLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERC 142 (181)
Q Consensus 63 I~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~ 142 (181)
+....-+|-.+.+.|++++ ++.++++.++||..||+|+|+.+| .++|+.+|.|++++.|++++..+. +
T Consensus 77 ~~qG~~dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vG-ls~a~~dAh~~v~~~a~~Vt~~~G--------G 144 (170)
T COG1778 77 LYQGISDKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVG-LSVAVADAHPLLKQRADYVTSKKG--------G 144 (170)
T ss_pred eeechHhHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcC-CcccccccCHHHHHhhHhhhhccC--------c
Confidence 5666779999999999999 999999999999999999999999 899999999999999999987642 3
Q ss_pred chHHHHHHHHhhCCCC
Q 048221 143 AARIMQAIGKFGLGPN 158 (181)
Q Consensus 143 ~~Gv~~~l~~~~l~~~ 158 (181)
+..+.++++-++...|
T Consensus 145 ~GAvREv~dlil~aq~ 160 (170)
T COG1778 145 EGAVREVCDLILQAQG 160 (170)
T ss_pred chHHHHHHHHHHHccC
Confidence 4445566665554444
No 33
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.17 E-value=1.7e-10 Score=108.30 Aligned_cols=94 Identities=19% Similarity=0.279 Sum_probs=70.6
Q ss_pred HHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC---CceEEE
Q 048221 37 MKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP---DIYGVM 113 (181)
Q Consensus 37 ~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a---~~~~va 113 (181)
.+.+...+... .+.+ .++..++||.|+++|||.|++++++. ++++.+++|||+.||++||+.+ + ++|+
T Consensus 628 ~~~l~~~~~~~--~~~v-~~g~~~veV~p~~vnKG~al~~ll~~-----~~~d~vl~~GD~~nDe~Mf~~~~~~~-~~v~ 698 (726)
T PRK14501 628 ILALSSLLSNA--PLEV-LRGNKVVEVRPAGVNKGRAVRRLLEA-----GPYDFVLAIGDDTTDEDMFRALPETA-ITVK 698 (726)
T ss_pred HHHHHHHhcCC--CeEE-EECCeEEEEEECCCCHHHHHHHHHhc-----CCCCEEEEECCCCChHHHHHhcccCc-eEEE
Confidence 34444433332 3443 35889999999999999999999874 4678999999999999999986 7 8999
Q ss_pred ecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 114 VSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 114 m~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
|+|+. ..|++..++ .++|.+.|+.+.
T Consensus 699 vG~~~----s~A~~~l~~-----------~~eV~~~L~~l~ 724 (726)
T PRK14501 699 VGPGE----SRARYRLPS-----------QREVRELLRRLL 724 (726)
T ss_pred ECCCC----CcceEeCCC-----------HHHHHHHHHHHh
Confidence 99963 345455443 466888888764
No 34
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.15 E-value=1.7e-10 Score=94.96 Aligned_cols=86 Identities=14% Similarity=0.235 Sum_probs=68.6
Q ss_pred EEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC-------CceEEEecCChHHHHH
Q 048221 51 VKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP-------DIYGVMVSNSQEELLQ 123 (181)
Q Consensus 51 ~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a-------~~~~vam~Na~~~lk~ 123 (181)
+.+ .++..++|+.|.++|||.+++++++++ +++..++++|||+.||++||+.+ +.+++.|+.+ ..+.
T Consensus 150 ~~v-~~g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~ 223 (244)
T TIGR00685 150 LEV-MDGKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKT 223 (244)
T ss_pred EEE-EECCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCC
Confidence 443 467899999999999999999999999 89889999999999999999988 3388899633 3344
Q ss_pred HhchhcCCCCccccccCCcchHHHHHHHHh
Q 048221 124 WHAENAKDNPKIIHATERCAARIMQAIGKF 153 (181)
Q Consensus 124 ~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~ 153 (181)
.|+++.++ .+.+.++++.+
T Consensus 224 ~A~~~~~~-----------~~~v~~~L~~l 242 (244)
T TIGR00685 224 VAKFHLTG-----------PQQVLEFLGLL 242 (244)
T ss_pred CceEeCCC-----------HHHHHHHHHHH
Confidence 45555543 56688887764
No 35
>PLN02580 trehalose-phosphatase
Probab=99.13 E-value=5.5e-10 Score=97.70 Aligned_cols=102 Identities=21% Similarity=0.359 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCcEEEEee-CCCCHHHHHHHHHHHhhhCCCCCCe---EEEEeCCcccHHHHhC---
Q 048221 34 FAIMKALSERLEERGLDVKLIFSSGMALDVLP-KGAGKGQALAYVLKKFKIDGKVPAN---TLVCGDSGNDAELFSV--- 106 (181)
Q Consensus 34 ~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~-~~~~Kg~al~~L~~~~~~~~i~~~~---~ia~GDs~NDl~Ml~~--- 106 (181)
+...+.+.+.+.+.. .+.+ ..|...+||.| .+++||.|+++|++++ +++..+ .++|||+.||.+||+.
T Consensus 267 ~~~~~~l~~~l~~~~-~l~v-~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 267 PLVAQCVHDVLKKYP-RLRL-THGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHHHHHHHHhCC-ceEE-EeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 444555555555432 2443 45678999999 5999999999999999 887663 3899999999999996
Q ss_pred --CCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 107 --PDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 107 --a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
.| ++|+|+|+.++.. |.+... +.+.|.++|+++.
T Consensus 342 ~~~G-~~I~Vgn~~~~t~--A~y~L~-----------dp~eV~~~L~~L~ 377 (384)
T PLN02580 342 GNRG-YGILVSSVPKESN--AFYSLR-----------DPSEVMEFLKSLV 377 (384)
T ss_pred cCCc-eEEEEecCCCCcc--ceEEcC-----------CHHHHHHHHHHHH
Confidence 58 8999999877664 333332 3678888887764
No 36
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.07 E-value=5.6e-10 Score=88.25 Aligned_cols=77 Identities=16% Similarity=0.117 Sum_probs=65.8
Q ss_pred eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcch
Q 048221 65 PKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAA 144 (181)
Q Consensus 65 ~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~ 144 (181)
....+|..+++.+++++ |++++++++|||+.||++|++.+| .+++|+++.+..+..|++++..+ +.+
T Consensus 92 ~g~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG-~~~~v~~~~~~~~~~a~~v~~~~---------~g~ 158 (183)
T PRK09484 92 QGQSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVG-LSVAVADAHPLLLPRADYVTRIA---------GGR 158 (183)
T ss_pred cCCCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCC-CeEecCChhHHHHHhCCEEecCC---------CCC
Confidence 35568999999999999 999999999999999999999999 89999999999998888877653 467
Q ss_pred HHHHHHHHhh
Q 048221 145 RIMQAIGKFG 154 (181)
Q Consensus 145 Gv~~~l~~~~ 154 (181)
|..+.+.+++
T Consensus 159 g~~~el~~~i 168 (183)
T PRK09484 159 GAVREVCDLL 168 (183)
T ss_pred CHHHHHHHHH
Confidence 7766665544
No 37
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.91 E-value=1.2e-08 Score=97.34 Aligned_cols=103 Identities=21% Similarity=0.349 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC------
Q 048221 35 AIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD------ 108 (181)
Q Consensus 35 ~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~------ 108 (181)
++...+...+.+.. + .+.+|..++||.|.++|||.|+++|++.....|++++.+++|||+.||.+||+.++
T Consensus 731 el~~~l~~~l~~~~--~-~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~ 807 (854)
T PLN02205 731 ELLDHLESVLANEP--V-TVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGP 807 (854)
T ss_pred HHHHHHHHHHhcCc--e-EEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCC
Confidence 44556666565532 3 45688999999999999999999998642212889999999999999999999875
Q ss_pred -------ceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhhC
Q 048221 109 -------IYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFGL 155 (181)
Q Consensus 109 -------~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l 155 (181)
+++|.||... +..+.|+. +.+.|.+.|+.+.-
T Consensus 808 ~~~~~~~~~~v~VG~~~------------S~A~y~L~---d~~eV~~lL~~L~~ 846 (854)
T PLN02205 808 SIAPRAEVFACTVGQKP------------SKAKYYLD---DTAEIVRLMQGLAS 846 (854)
T ss_pred cccccccceeEEECCCC------------ccCeEecC---CHHHHHHHHHHHHh
Confidence 1456676432 22223333 26788888888763
No 38
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.72 E-value=2.3e-08 Score=81.13 Aligned_cols=104 Identities=18% Similarity=0.255 Sum_probs=69.1
Q ss_pred CCCceEEEEEecchhHHHHHHHHHHHHHhcCC---cEEEEE--EcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEE
Q 048221 18 EQRPHKISFFVEKFKAFAIMKALSERLEERGL---DVKLIF--SSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTL 92 (181)
Q Consensus 18 ~~~v~Ki~~~~~~~~~~~~~~~i~~~~~~~g~---~~~~~~--s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~i 92 (181)
...-+|+.++.-. ...+.+.+.+.+.-... .+.... -.++-+-.+-.+-+|..+++.+++.+ |+++++++
T Consensus 90 k~~G~~v~iiSgg--~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~~---g~~~~~~~ 164 (212)
T COG0560 90 KAAGAKVVIISGG--FTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAEL---GIPLEETV 164 (212)
T ss_pred HHCCCEEEEEcCC--hHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHHc---CCCHHHeE
Confidence 3455777776633 23345555554421110 111110 01222223334457999999999999 99999999
Q ss_pred EEeCCcccHHHHhCCCceEEEecCChHHHHHHhchh
Q 048221 93 VCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAEN 128 (181)
Q Consensus 93 a~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v 128 (181)
++|||.||+|||+.+| ++++++ +.|.+++.|+..
T Consensus 165 a~gDs~nDlpml~~ag-~~ia~n-~~~~l~~~a~~~ 198 (212)
T COG0560 165 AYGDSANDLPMLEAAG-LPIAVN-PKPKLRALADVR 198 (212)
T ss_pred EEcCchhhHHHHHhCC-CCeEeC-cCHHHHHHHHHh
Confidence 9999999999999999 999976 788888887543
No 39
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.43 E-value=4.5e-07 Score=73.69 Aligned_cols=82 Identities=24% Similarity=0.397 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC----CcccHHHHhCCCce
Q 048221 35 AIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGD----SGNDAELFSVPDIY 110 (181)
Q Consensus 35 ~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD----s~NDl~Ml~~a~~~ 110 (181)
++.+.++++|++. .+.+..-|...+||.|+|.+|..+|++|.+.. .+++.+||| +.||.|.+...++.
T Consensus 130 ~~v~~L~~~f~d~--~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~------~~~I~FfGDkt~pGGNDyei~~~~rt~ 201 (220)
T PF03332_consen 130 KLVEALKKEFPDF--GLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG------FDEIHFFGDKTFPGGNDYEIFEDPRTI 201 (220)
T ss_dssp HHHHHHHHHTCCC--SEEEEEETTTEEEEEETT-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTTSE
T ss_pred HHHHHHHHHCCCC--ceEEecCCceEEccccCCccHHHHHHHHHhcc------cceEEEEehhccCCCCCceeeecCCcc
Confidence 4455666666654 36667788999999999999999999986532 589999999 99999999988767
Q ss_pred EEEecCChHHHHHH
Q 048221 111 GVMVSNSQEELLQW 124 (181)
Q Consensus 111 ~vam~Na~~~lk~~ 124 (181)
|+.|.+..+-++.+
T Consensus 202 g~~V~~p~DT~~~l 215 (220)
T PF03332_consen 202 GHTVTSPEDTIKQL 215 (220)
T ss_dssp EEE-SSHHHHHHHH
T ss_pred EEEeCCHHHHHHHH
Confidence 99999877766654
No 40
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.23 E-value=5.2e-06 Score=79.40 Aligned_cols=66 Identities=18% Similarity=0.261 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHH
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQ 148 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~ 148 (181)
+|..+++.+. ...++++++||+.||.+|++.+| .|++|+|+++..++.|+.+...++ .+++.+
T Consensus 700 ~K~~~i~~l~-------~~~~~v~~vGDg~nD~~al~~Ag-vgia~g~g~~~a~~~ad~vl~~~~---------~~~i~~ 762 (834)
T PRK10671 700 GKAEAIKRLQ-------SQGRQVAMVGDGINDAPALAQAD-VGIAMGGGSDVAIETAAITLMRHS---------LMGVAD 762 (834)
T ss_pred HHHHHHHHHh-------hcCCEEEEEeCCHHHHHHHHhCC-eeEEecCCCHHHHHhCCEEEecCC---------HHHHHH
Confidence 5888777764 33568999999999999999999 899999999999999888776543 778888
Q ss_pred HHH
Q 048221 149 AIG 151 (181)
Q Consensus 149 ~l~ 151 (181)
+++
T Consensus 763 ~i~ 765 (834)
T PRK10671 763 ALA 765 (834)
T ss_pred HHH
Confidence 775
No 41
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.20 E-value=2.2e-06 Score=68.57 Aligned_cols=58 Identities=29% Similarity=0.426 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~ 131 (181)
.|...++.+++++ +++++++++||||.+|+++++.+| .++++ |+.+.+++.|+++..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag-~~i~~-~~~~~~~~~a~~~i~~ 209 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAG-LGIAF-NAKPKLQQKADICINK 209 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCC-CeEEe-CCCHHHHHhchhccCC
Confidence 4899999999999 999999999999999999999999 89998 5788899888887654
No 42
>PLN03017 trehalose-phosphatase
Probab=98.15 E-value=1.8e-05 Score=69.14 Aligned_cols=102 Identities=18% Similarity=0.304 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeC-CCCHHHHHHHHHHHhhhCCCCC---CeEEEEeCCcccHHHHhCC--
Q 048221 34 FAIMKALSERLEERGLDVKLIFSSGMALDVLPK-GAGKGQALAYVLKKFKIDGKVP---ANTLVCGDSGNDAELFSVP-- 107 (181)
Q Consensus 34 ~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~-~~~Kg~al~~L~~~~~~~~i~~---~~~ia~GDs~NDl~Ml~~a-- 107 (181)
.++...+...+.+.. .+.+ ..|..-+|+-|. +.+||.|+++|++.+ ++.. .-.+++||..-|..||+..
T Consensus 249 ~~l~~~~~~vl~~~~-~l~v-~~GkkVlEvRP~~~~dKG~Av~~LL~~l---~~~~~~~~~pvyiGDD~TDEDaF~~L~~ 323 (366)
T PLN03017 249 SELVLQVRSVLKNFP-TLKL-TQGRKVFEIRPMIEWDKGKALEFLLESL---GFGNTNNVFPVYIGDDRTDEDAFKMLRD 323 (366)
T ss_pred HHHHHHHHHHHHhCC-CcEE-eCCCeEEEecCCCCCCHHHHHHHHHHhc---ccccCCCceEEEeCCCCccHHHHHHHhh
Confidence 445566666565542 2332 578899999995 999999999999998 7653 3589999999999999965
Q ss_pred ---CceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 108 ---DIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 108 ---~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
| ++|.|+..+.+ ..|.+... +.+.|.++|+++.
T Consensus 324 ~~~G-~gI~VG~~~k~--T~A~y~L~-----------dp~eV~~fL~~L~ 359 (366)
T PLN03017 324 RGEG-FGILVSKFPKD--TDASYSLQ-----------DPSEVMDFLARLV 359 (366)
T ss_pred cCCc-eEEEECCCCCC--CcceEeCC-----------CHHHHHHHHHHHH
Confidence 6 78889864333 22443332 3778888888775
No 43
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=98.13 E-value=1.1e-05 Score=65.76 Aligned_cols=80 Identities=25% Similarity=0.429 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHHhc-CCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCC---CCeEEEEeCCcccHHHHhCCC
Q 048221 33 AFAIMKALSERLEER-GLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKV---PANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 33 ~~~~~~~i~~~~~~~-g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~---~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
..++.+.+.+.+... + +. +..|...+||.|.+.+||.|+++|++.+ +.. ..-++++||+..|.+||+++.
T Consensus 131 ~~~l~~~l~~~~~~~~~--~~-v~~g~~~vEvrp~~~~KG~av~~ll~~~---~~~~~~~~~~l~~GDD~tDE~~f~~~~ 204 (235)
T PF02358_consen 131 ARELAEQLREILASHPG--LE-VVPGKKVVEVRPPGVNKGSAVRRLLEEL---PFAGPKPDFVLYIGDDRTDEDAFRALR 204 (235)
T ss_dssp HHHHHHHHHHHHHHH-T---E-EEE-SSEEEEE-TT--HHHHHHHHHTTS------------EEEEESSHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhCCC--EE-EEECCCEEEEEeCCCChHHHHHHHHHhc---CccccccceeEEecCCCCCHHHHHHHH
Confidence 455666666655553 4 33 2567899999999999999999999998 554 678999999999999999854
Q ss_pred c-----eEEEecCCh
Q 048221 109 I-----YGVMVSNSQ 118 (181)
Q Consensus 109 ~-----~~vam~Na~ 118 (181)
- .++.|+...
T Consensus 205 ~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 205 ELEEGGFGIKVGSVS 219 (235)
T ss_dssp TS----EEEEES---
T ss_pred hcccCCCCeEEEeec
Confidence 2 477777654
No 44
>PLN02151 trehalose-phosphatase
Probab=98.11 E-value=2.1e-05 Score=68.37 Aligned_cols=102 Identities=18% Similarity=0.304 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeC-CCCHHHHHHHHHHHhhhCCCCCC---eEEEEeCCcccHHHHhCC--
Q 048221 34 FAIMKALSERLEERGLDVKLIFSSGMALDVLPK-GAGKGQALAYVLKKFKIDGKVPA---NTLVCGDSGNDAELFSVP-- 107 (181)
Q Consensus 34 ~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~-~~~Kg~al~~L~~~~~~~~i~~~---~~ia~GDs~NDl~Ml~~a-- 107 (181)
..+.+.+.+.+.+.. .+. ...|...+||-|. +.+||.|+++|++.+ ++... -.+++||..-|..||+..
T Consensus 235 ~~l~~~l~~v~~~~~-~l~-v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~---~~~~~~~~~pvyiGDD~TDEDaF~~L~~ 309 (354)
T PLN02151 235 SDLANQVRSVLKNYP-KLM-LTQGRKVLEIRPIIKWDKGKALEFLLESL---GYANCTDVFPIYIGDDRTDEDAFKILRD 309 (354)
T ss_pred HHHHHHHHHHHhhCC-CcE-EecCCEEEEEeCCCCCCHHHHHHHHHHhc---ccccCCCCeEEEEcCCCcHHHHHHHHhh
Confidence 344555555555532 233 3578899999995 999999999999998 66532 389999999999999864
Q ss_pred ---CceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHhh
Q 048221 108 ---DIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKFG 154 (181)
Q Consensus 108 ---~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~ 154 (181)
| .|+.|+....+. .|++... +.+.|.++|+++.
T Consensus 310 ~~~G-~gI~Vg~~~k~T--~A~y~L~-----------dp~eV~~~L~~L~ 345 (354)
T PLN02151 310 KKQG-LGILVSKYAKET--NASYSLQ-----------EPDEVMEFLERLV 345 (354)
T ss_pred cCCC-ccEEeccCCCCC--cceEeCC-----------CHHHHHHHHHHHH
Confidence 6 678888544332 2333332 3778888888765
No 45
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.10 E-value=5e-06 Score=65.19 Aligned_cols=53 Identities=23% Similarity=0.368 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHh
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWH 125 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A 125 (181)
.+|+.+++.+++++ ++++++++++|||.||++|++.+| .+++++. .+.+.+.|
T Consensus 146 ~~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag-~~~a~~~-~~~~~~~a 198 (201)
T TIGR01491 146 DNKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVAD-ISISLGD-EGHADYLA 198 (201)
T ss_pred ccHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcC-CeEEECC-Cccchhhc
Confidence 57889999999999 999999999999999999999999 8998764 44445444
No 46
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.07 E-value=1.4e-05 Score=64.25 Aligned_cols=55 Identities=18% Similarity=0.255 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhc
Q 048221 66 KGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENA 129 (181)
Q Consensus 66 ~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~ 129 (181)
....|...++.+. .. +. +++++|||.||++|++.+| .++++. |.|.+++.|+...
T Consensus 129 ~~~~K~~~l~~l~-~~---~~---~~v~vGDs~nDl~ml~~Ag-~~ia~~-ak~~~~~~~~~~~ 183 (203)
T TIGR02137 129 QKDPKRQSVIAFK-SL---YY---RVIAAGDSYNDTTMLSEAH-AGILFH-APENVIREFPQFP 183 (203)
T ss_pred CcchHHHHHHHHH-hh---CC---CEEEEeCCHHHHHHHHhCC-CCEEec-CCHHHHHhCCCCC
Confidence 3458999999884 44 43 7999999999999999999 899986 8889998876543
No 47
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=97.97 E-value=1.4e-05 Score=77.16 Aligned_cols=56 Identities=18% Similarity=0.190 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
+|...++.+. -..+.+.++|||.||.+||+.|+ .|++|+++.+..++.|+++..++
T Consensus 618 ~K~~iV~~lq-------~~g~~va~iGDG~ND~~alk~Ad-VGia~g~g~~~ak~aAD~vl~dd 673 (917)
T TIGR01116 618 HKSELVELLQ-------EQGEIVAMTGDGVNDAPALKKAD-IGIAMGSGTEVAKEASDMVLADD 673 (917)
T ss_pred HHHHHHHHHH-------hcCCeEEEecCCcchHHHHHhCC-eeEECCCCcHHHHHhcCeEEccC
Confidence 4555555543 22356778999999999999999 89999999999999999887653
No 48
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.96 E-value=8e-06 Score=64.42 Aligned_cols=48 Identities=31% Similarity=0.273 Sum_probs=43.4
Q ss_pred eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 65 PKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 65 ~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
..+..|..+++.+++++ ++++++++++|||.+|++|++.+| .++++..
T Consensus 151 ~~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~-~~~~v~~ 198 (202)
T TIGR01490 151 CKGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVG-HPYVVNP 198 (202)
T ss_pred CCChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCC-CcEEeCC
Confidence 34567999999999999 999999999999999999999999 8998874
No 49
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=97.95 E-value=9.4e-05 Score=69.37 Aligned_cols=67 Identities=15% Similarity=0.156 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHH
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIM 147 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~ 147 (181)
.+|...++.++++- ..+.++||+.||.++|+.++ .|++|+++.+..++.|+.+.-+.+ -..+.
T Consensus 495 edK~~~v~~lq~~g-------~~VamvGDG~NDapAL~~Ad-vGiAm~~gt~~akeaadivLldd~---------~s~Iv 557 (675)
T TIGR01497 495 EDKIALIRQEQAEG-------KLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAANMVDLDSD---------PTKLI 557 (675)
T ss_pred HHHHHHHHHHHHcC-------CeEEEECCCcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEECCCC---------HHHHH
Confidence 47999999987664 26999999999999999999 899999999999999988765432 45566
Q ss_pred HHHH
Q 048221 148 QAIG 151 (181)
Q Consensus 148 ~~l~ 151 (181)
++++
T Consensus 558 ~av~ 561 (675)
T TIGR01497 558 EVVH 561 (675)
T ss_pred HHHH
Confidence 5553
No 50
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=97.95 E-value=6.8e-05 Score=68.93 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~ 131 (181)
+|...++.+.+ ..++++++||+.||.++++.++ .+++|+++.+..+..|+.+..+
T Consensus 454 ~K~~~v~~l~~-------~~~~v~~VGDg~nD~~al~~A~-vgia~g~g~~~a~~~Advvl~~ 508 (562)
T TIGR01511 454 DKAALIKELQE-------KGRVVAMVGDGINDAPALAQAD-VGIAIGAGTDVAIEAADVVLMR 508 (562)
T ss_pred HHHHHHHHHHH-------cCCEEEEEeCCCccHHHHhhCC-EEEEeCCcCHHHHhhCCEEEeC
Confidence 77777777654 3478999999999999999999 8999999988888888877754
No 51
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.93 E-value=6.8e-05 Score=68.72 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHH
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQ 148 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~ 148 (181)
+|...++.+.+ .+.+++++||+.||+++++.+| .+++|+++.+..+..|+++..+++ -.++.+
T Consensus 435 ~K~~~v~~l~~-------~~~~v~~vGDg~nD~~al~~A~-vgia~g~~~~~~~~~Ad~vi~~~~---------~~~l~~ 497 (556)
T TIGR01525 435 DKLAIVKELQE-------EGGVVAMVGDGINDAPALAAAD-VGIAMGAGSDVAIEAADIVLLNDD---------LSSLPT 497 (556)
T ss_pred HHHHHHHHHHH-------cCCEEEEEECChhHHHHHhhCC-EeEEeCCCCHHHHHhCCEEEeCCC---------HHHHHH
Confidence 67766666643 3458999999999999999999 899999988888888888877543 566666
Q ss_pred HH
Q 048221 149 AI 150 (181)
Q Consensus 149 ~l 150 (181)
++
T Consensus 498 ~i 499 (556)
T TIGR01525 498 AI 499 (556)
T ss_pred HH
Confidence 55
No 52
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=97.91 E-value=7.3e-05 Score=68.29 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=58.5
Q ss_pred HHHHHhcCC-cEEEEEEc---------------CcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHH
Q 048221 41 SERLEERGL-DVKLIFSS---------------GMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELF 104 (181)
Q Consensus 41 ~~~~~~~g~-~~~~~~s~---------------~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml 104 (181)
-+.+++.|+ ++.+..+. ..|-++.| .+|...++.+.+. .++++++||+.||++++
T Consensus 371 i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p--~~K~~~i~~l~~~-------~~~v~~vGDg~nD~~al 441 (536)
T TIGR01512 371 IAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP--EDKLEIVKELREK-------YGPVAMVGDGINDAPAL 441 (536)
T ss_pred HHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc--HHHHHHHHHHHhc-------CCEEEEEeCCHHHHHHH
Confidence 345667777 66554332 12334444 3787777776433 36899999999999999
Q ss_pred hCCCceEEEec-CChHHHHHHhchhcCC
Q 048221 105 SVPDIYGVMVS-NSQEELLQWHAENAKD 131 (181)
Q Consensus 105 ~~a~~~~vam~-Na~~~lk~~A~~v~~~ 131 (181)
+.+| .|++|+ ++.+..+..|+.+...
T Consensus 442 ~~A~-vgia~g~~~~~~~~~~ad~vl~~ 468 (536)
T TIGR01512 442 AAAD-VGIAMGASGSDVAIETADVVLLN 468 (536)
T ss_pred HhCC-EEEEeCCCccHHHHHhCCEEEEC
Confidence 9999 899999 7888888888877643
No 53
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.85 E-value=1.3e-05 Score=61.58 Aligned_cols=41 Identities=27% Similarity=0.402 Sum_probs=37.3
Q ss_pred eeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC
Q 048221 64 LPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP 107 (181)
Q Consensus 64 ~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a 107 (181)
.+.+.+|...++.+++.+ ++++++++++|||.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 456789999999999999 99999999999999999999864
No 54
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.78 E-value=0.0001 Score=69.90 Aligned_cols=61 Identities=21% Similarity=0.290 Sum_probs=49.4
Q ss_pred EEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 61 LDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 61 leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
.+..|. +|...++.+.+. ..++.+||+.||.++|+.++ .|++|+++.+..++.|+.+...+
T Consensus 611 ~~~~p~--~K~~~v~~l~~~--------~~v~mvGDgiNDapAl~~A~-vgia~g~~~~~a~~~adivl~~~ 671 (741)
T PRK11033 611 AGLLPE--DKVKAVTELNQH--------APLAMVGDGINDAPAMKAAS-IGIAMGSGTDVALETADAALTHN 671 (741)
T ss_pred cCCCHH--HHHHHHHHHhcC--------CCEEEEECCHHhHHHHHhCC-eeEEecCCCHHHHHhCCEEEecC
Confidence 344443 799988877421 36999999999999999999 89999999999999888776543
No 55
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=97.70 E-value=6.6e-05 Score=73.63 Aligned_cols=56 Identities=16% Similarity=0.192 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-CChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-NSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-Na~~~lk~~A~~v~~~~ 132 (181)
+|..-++.+.++- ..+.++|||.||.+||+.|+ .|++|+ ++.+..++.|+.+..++
T Consensus 733 ~K~~iV~~lq~~g-------~~Vam~GDGvNDapaLk~Ad-VGIAmg~~gt~vak~aADivl~dd 789 (1053)
T TIGR01523 733 TKVKMIEALHRRK-------AFCAMTGDGVNDSPSLKMAN-VGIAMGINGSDVAKDASDIVLSDD 789 (1053)
T ss_pred HHHHHHHHHHhcC-------CeeEEeCCCcchHHHHHhCC-ccEecCCCccHHHHHhcCEEEecC
Confidence 5667777765442 46899999999999999999 899998 88998999998887653
No 56
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.66 E-value=0.00021 Score=56.39 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=27.0
Q ss_pred CCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 85 GKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 85 ~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+..+.++++||||.||++|.+.+| .+++.+..
T Consensus 141 ~~~~~~~v~iGDs~~D~~~~~aa~-~~v~~~~~ 172 (205)
T PRK13582 141 KSLGYRVIAAGDSYNDTTMLGEAD-AGILFRPP 172 (205)
T ss_pred HHhCCeEEEEeCCHHHHHHHHhCC-CCEEECCC
Confidence 334578999999999999999999 79987654
No 57
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.64 E-value=0.00028 Score=66.58 Aligned_cols=90 Identities=17% Similarity=0.289 Sum_probs=70.1
Q ss_pred HHHHhcCCcEEEEEEc----------------CcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 42 ERLEERGLDVKLIFSS----------------GMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 42 ~~~~~~g~~~~~~~s~----------------~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
+.+++.|++. +..+| ..+=|+.|. +|.+.++.|.++. ..++.+|||.||.|-|.
T Consensus 547 ~~L~~~Gi~~-~mLTGDn~~~A~~iA~~lGId~v~AellPe--dK~~~V~~l~~~g-------~~VamVGDGINDAPALA 616 (713)
T COG2217 547 AALKALGIKV-VMLTGDNRRTAEAIAKELGIDEVRAELLPE--DKAEIVRELQAEG-------RKVAMVGDGINDAPALA 616 (713)
T ss_pred HHHHHCCCeE-EEEcCCCHHHHHHHHHHcChHhheccCCcH--HHHHHHHHHHhcC-------CEEEEEeCCchhHHHHh
Confidence 4567778773 44555 355677775 8999999998664 46999999999999999
Q ss_pred CCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHH
Q 048221 106 VPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIG 151 (181)
Q Consensus 106 ~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~ 151 (181)
.++ .|++|+.+++-.++.||.+.-.++ -..+.++++
T Consensus 617 ~Ad-VGiAmG~GtDvA~eaADvvL~~~d---------L~~v~~ai~ 652 (713)
T COG2217 617 AAD-VGIAMGSGTDVAIEAADVVLMRDD---------LSAVPEAID 652 (713)
T ss_pred hcC-eeEeecCCcHHHHHhCCEEEecCC---------HHHHHHHHH
Confidence 999 899999999999999987765432 556665553
No 58
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=97.59 E-value=0.00015 Score=69.88 Aligned_cols=57 Identities=19% Similarity=0.189 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
-+|.+-++.+.++ | ..+.++|||.||.|+|+.|+ .|++|+++++-.|+.|+.+.-++
T Consensus 589 e~K~~iV~~lq~~----G---~vVam~GDGvNDapALk~Ad-VGIAmg~gtdvAk~aADiVLldd 645 (867)
T TIGR01524 589 MQKSRIIGLLKKA----G---HTVGFLGDGINDAPALRKAD-VGISVDTAADIAKEASDIILLEK 645 (867)
T ss_pred HHHHHHHHHHHhC----C---CEEEEECCCcccHHHHHhCC-EEEEeCCccHHHHHhCCEEEecC
Confidence 3788877777544 2 46899999999999999999 89999999999999998877543
No 59
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=97.59 E-value=0.00011 Score=71.70 Aligned_cols=56 Identities=23% Similarity=0.162 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC-ChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN-SQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N-a~~~lk~~A~~v~~~~ 132 (181)
.|..-++.+.+. | .-|.++|||.||.+||+.|+ .|++|++ +.+..++.|+.+..++
T Consensus 671 qK~~IV~~lq~~----g---~vv~~~GDG~ND~paLk~Ad-VGiamg~~G~~vak~aADivL~dd 727 (997)
T TIGR01106 671 QKLIIVEGCQRQ----G---AIVAVTGDGVNDSPALKKAD-IGVAMGIAGSDVSKQAADMILLDD 727 (997)
T ss_pred HHHHHHHHHHHC----C---CEEEEECCCcccHHHHhhCC-cceecCCcccHHHHHhhceEEecC
Confidence 566666665432 2 36899999999999999999 8999995 6888888888887653
No 60
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=97.57 E-value=0.00012 Score=71.02 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-CChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-NSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-Na~~~lk~~A~~v~~~~ 132 (181)
+|..-++.|.++- ..|.++|||-||.++|+.|+ .|++|+ ++.+..++.|+.+..++
T Consensus 656 ~K~~iV~~lq~~g-------~vVam~GDGvNDapALk~Ad-VGIAmg~~gtdvAk~aADivL~dd 712 (941)
T TIGR01517 656 DKQLLVLMLKDMG-------EVVAVTGDGTNDAPALKLAD-VGFSMGISGTEVAKEASDIILLDD 712 (941)
T ss_pred HHHHHHHHHHHCC-------CEEEEECCCCchHHHHHhCC-cceecCCCccHHHHHhCCEEEecC
Confidence 7888888876542 36999999999999999999 899999 89999999998887653
No 61
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=97.55 E-value=0.00019 Score=67.41 Aligned_cols=71 Identities=15% Similarity=0.187 Sum_probs=55.3
Q ss_pred EEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccC
Q 048221 61 LDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATE 140 (181)
Q Consensus 61 leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~ 140 (181)
-+..| -+|.+-++.++++- .-+...|||-||.|.|+.|+ .|++|+++++..|+.|+.+.-+++
T Consensus 489 A~~~P--edK~~iV~~lQ~~G-------~~VaMtGDGvNDAPALa~AD-VGIAMgsGTdvAkeAADiVLldd~------- 551 (679)
T PRK01122 489 AEATP--EDKLALIRQEQAEG-------RLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAGNMVDLDSN------- 551 (679)
T ss_pred ccCCH--HHHHHHHHHHHHcC-------CeEEEECCCcchHHHHHhCC-EeEEeCCCCHHHHHhCCEEEeCCC-------
Confidence 34444 37888888876543 35889999999999999999 899999999999999988775533
Q ss_pred CcchHHHHHH
Q 048221 141 RCAARIMQAI 150 (181)
Q Consensus 141 ~~~~Gv~~~l 150 (181)
-..+.+++
T Consensus 552 --~s~Iv~av 559 (679)
T PRK01122 552 --PTKLIEVV 559 (679)
T ss_pred --HHHHHHHH
Confidence 45555555
No 62
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=97.48 E-value=0.00023 Score=68.87 Aligned_cols=56 Identities=20% Similarity=0.168 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
+|..-++.|.++ | .-|..+|||-||.|.|+.|+ .|++|+++++-.|+.|+.+.-++
T Consensus 625 ~K~~iV~~Lq~~----G---~vVamtGDGvNDaPALk~AD-VGIAmg~gtdvAkeaADiVLldd 680 (903)
T PRK15122 625 QKSRVLKALQAN----G---HTVGFLGDGINDAPALRDAD-VGISVDSGADIAKESADIILLEK 680 (903)
T ss_pred HHHHHHHHHHhC----C---CEEEEECCCchhHHHHHhCC-EEEEeCcccHHHHHhcCEEEecC
Confidence 688888888654 2 45888999999999999999 89999999999999999887543
No 63
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=97.44 E-value=0.0003 Score=68.12 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
+|.+-++.|.++ | ..|..+|||-||.|.|+.|+ .|++|+++.+-.|+.|+.+.-++
T Consensus 625 ~K~~IV~~Lq~~----G---~vVam~GDGvNDaPALk~AD-VGIAmg~gtdvAkeaADiVLldd 680 (902)
T PRK10517 625 HKERIVTLLKRE----G---HVVGFMGDGINDAPALRAAD-IGISVDGAVDIAREAADIILLEK 680 (902)
T ss_pred HHHHHHHHHHHC----C---CEEEEECCCcchHHHHHhCC-EEEEeCCcCHHHHHhCCEEEecC
Confidence 677777777543 2 45889999999999999999 89999999999999998877543
No 64
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=97.42 E-value=0.00033 Score=66.61 Aligned_cols=56 Identities=20% Similarity=0.198 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
+|..-++.+.++ | ..+..+|||-||.|.|+.|+ .|++|+++++..|+.|+.+.-++
T Consensus 522 ~K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~Ad-VGIAm~~gtdvAkeaADivLl~d 577 (755)
T TIGR01647 522 HKYEIVEILQKR----G---HLVGMTGDGVNDAPALKKAD-VGIAVAGATDAARSAADIVLTEP 577 (755)
T ss_pred HHHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCC-eeEEecCCcHHHHHhCCEEEEcC
Confidence 577777776543 2 46999999999999999999 89999999999999998776543
No 65
>PRK11590 hypothetical protein; Provisional
Probab=97.41 E-value=0.00028 Score=56.62 Aligned_cols=45 Identities=24% Similarity=0.147 Sum_probs=34.6
Q ss_pred HHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHH
Q 048221 74 LAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQ 123 (181)
Q Consensus 74 l~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~ 123 (181)
++.|.+.+ +.+...+.+.|||.||+|||+.++ ++++|+ +++.+++
T Consensus 165 ~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~a~-~~~~vn-p~~~l~~ 209 (211)
T PRK11590 165 VAQLERKI---GTPLRLYSGYSDSKQDNPLLYFCQ-HRWRVT-PRGELQQ 209 (211)
T ss_pred HHHHHHHh---CCCcceEEEecCCcccHHHHHhCC-CCEEEC-ccHHhhc
Confidence 34444445 556778899999999999999999 999986 5555543
No 66
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=97.39 E-value=0.00037 Score=65.43 Aligned_cols=80 Identities=16% Similarity=0.195 Sum_probs=59.9
Q ss_pred HHHHhcCCcEEEEEEcC----------------cEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 42 ERLEERGLDVKLIFSSG----------------MALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 42 ~~~~~~g~~~~~~~s~~----------------~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
+++++.|++. +..+|. .+-++.| -+|.+-++.++++- ..+...|||-||.|.|+
T Consensus 451 ~~Lr~~GI~v-vMiTGDn~~TA~aIA~elGI~~v~A~~~P--edK~~iV~~lQ~~G-------~~VaMtGDGvNDAPALa 520 (673)
T PRK14010 451 RELREMGIET-VMCTGDNELTAATIAKEAGVDRFVAECKP--EDKINVIREEQAKG-------HIVAMTGDGTNDAPALA 520 (673)
T ss_pred HHHHHCCCeE-EEECCCCHHHHHHHHHHcCCceEEcCCCH--HHHHHHHHHHHhCC-------CEEEEECCChhhHHHHH
Confidence 3566777665 345552 2334444 47888888876542 35888899999999999
Q ss_pred CCCceEEEecCChHHHHHHhchhcCCC
Q 048221 106 VPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 106 ~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
.|+ .|++|+++.+..|+.|+.+.-++
T Consensus 521 ~AD-VGIAMgsGTdvAkeAADiVLldd 546 (673)
T PRK14010 521 EAN-VGLAMNSGTMSAKEAANLIDLDS 546 (673)
T ss_pred hCC-EEEEeCCCCHHHHHhCCEEEcCC
Confidence 999 89999999999999998877543
No 67
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=97.30 E-value=0.00053 Score=66.23 Aligned_cols=55 Identities=22% Similarity=0.242 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-CChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-NSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-Na~~~lk~~A~~v~~~ 131 (181)
+|..-++.+.+. | +.++++|||.||.++++.|+ .|++|+ ++.+..+..|+.+..+
T Consensus 605 ~K~~iv~~lq~~----g---~~v~mvGDGvND~pAl~~Ad-VGia~g~~g~~va~~aaDivl~d 660 (884)
T TIGR01522 605 HKMKIVKALQKR----G---DVVAMTGDGVNDAPALKLAD-IGVAMGQTGTDVAKEAADMILTD 660 (884)
T ss_pred HHHHHHHHHHHC----C---CEEEEECCCcccHHHHHhCC-eeEecCCCcCHHHHHhcCEEEcC
Confidence 576666665432 2 67999999999999999999 899998 5788888888887754
No 68
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.30 E-value=0.00042 Score=49.60 Aligned_cols=43 Identities=33% Similarity=0.373 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEE
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
-.|....+.+++++ ++++++++++||+.+|++|++.++..+++
T Consensus 96 ~~~~~~~~~~~~~~---~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLL---GVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHc---CCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56888899999999 88899999999999999999996645554
No 69
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.24 E-value=0.0028 Score=53.21 Aligned_cols=46 Identities=26% Similarity=0.321 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
.|..++..+++++ +++++++++|||+.+|+.+-+.+|+.++.+..+
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g 241 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGLIAVAVTWG 241 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 5778999999999 999999999999999999999999777766654
No 70
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=97.21 E-value=0.00057 Score=66.28 Aligned_cols=55 Identities=18% Similarity=0.166 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-CChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-NSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-Na~~~lk~~A~~v~~~ 131 (181)
.|..-++.|.++= .-|.+.|||-||.|||+.|+ .||+|+ ++.+..|+.|+.+...
T Consensus 626 qK~~IV~~lq~~g-------~vVamtGDGvNDapALk~AD-VGIamg~~Gtdaak~Aadivl~d 681 (917)
T COG0474 626 QKARIVEALQKSG-------HVVAMTGDGVNDAPALKAAD-VGIAMGGEGTDAAKEAADIVLLD 681 (917)
T ss_pred HHHHHHHHHHhCC-------CEEEEeCCCchhHHHHHhcC-ccEEecccHHHHHHhhcceEeec
Confidence 6777777775542 46889999999999999999 899998 5889999888776654
No 71
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=97.21 E-value=0.0048 Score=59.16 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=44.2
Q ss_pred EEcCcEEEEeeCCCCHHHHHHHHHHHhhhC---CCCCCeEEEEeCCc-ccHHHHhCCC
Q 048221 55 FSSGMALDVLPKGAGKGQALAYVLKKFKID---GKVPANTLVCGDSG-NDAELFSVPD 108 (181)
Q Consensus 55 ~s~~~~leI~~~~~~Kg~al~~L~~~~~~~---~i~~~~~ia~GDs~-NDl~Ml~~a~ 108 (181)
..|...+||-|.++|||.|++.|++.+... +..++-++++||.. -|-.||++.+
T Consensus 664 ~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 664 VRGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred EECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 578999999999999999999999976110 12467899999974 4999999765
No 72
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=97.18 E-value=0.00038 Score=54.64 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=29.5
Q ss_pred HHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 73 ALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 73 al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
.+..+++.+ ++++.+|+++||+.||++|++.||
T Consensus 183 ~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 567788888 888999999999999999999876
No 73
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.16 E-value=0.00068 Score=54.74 Aligned_cols=47 Identities=26% Similarity=0.155 Sum_probs=34.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHH
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELL 122 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk 122 (181)
..|...++ +.+ +.+.+.+.+.|||.||+|||+.++ ++++|+ +++.+.
T Consensus 161 ~~Kv~rl~---~~~---~~~~~~~~aYsDS~~D~pmL~~a~-~~~~Vn-p~~~L~ 207 (210)
T TIGR01545 161 HEKVAQLE---QKI---GSPLKLYSGYSDSKQDNPLLAFCE-HRWRVS-KRGELQ 207 (210)
T ss_pred hHHHHHHH---HHh---CCChhheEEecCCcccHHHHHhCC-CcEEEC-cchHhc
Confidence 34544444 444 546677899999999999999999 999986 555554
No 74
>PLN02954 phosphoserine phosphatase
Probab=97.15 E-value=0.0018 Score=51.85 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=32.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 66 KGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 66 ~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
.+.+|..+++.+++++ +. +++++||||.||++|.+.++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~ 189 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGG 189 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCC
Confidence 3457999999999988 75 68999999999999988855
No 75
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.12 E-value=0.001 Score=53.94 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
+-..+.++++++ |++++++++|||+.+|+.+-+.+|+..+++..
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 345688999999 99999999999999999999999966666643
No 76
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.11 E-value=0.0012 Score=52.50 Aligned_cols=47 Identities=17% Similarity=0.158 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
--|...++++++++ +++++++++|||+.+|+.+-+.+|+..+.+..+
T Consensus 138 Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g 184 (214)
T PRK13288 138 KPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTKTAGVAWT 184 (214)
T ss_pred CCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCC
Confidence 35678999999999 999999999999999999999999666666544
No 77
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.04 E-value=0.0029 Score=49.07 Aligned_cols=46 Identities=28% Similarity=0.193 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
-|...++.+++++ +++++++++|||+.+|+.+.+.+|..++.+...
T Consensus 104 P~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 104 PKIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 4568889999999 999999999999999999999999666666544
No 78
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=96.92 E-value=0.0077 Score=47.58 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
+...++.+++++ +++++++++|||+.+|+.+-+.+|+..+.+.
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~ 175 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTATVAAL 175 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCeEEEEE
Confidence 578889999999 9999999999999999999999996555554
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.91 E-value=0.0011 Score=55.48 Aligned_cols=50 Identities=28% Similarity=0.377 Sum_probs=42.7
Q ss_pred eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 65 PKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 65 ~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+..-.+...++.+++++ |++++++++|||+.||+++.+.+|+.++.+.++
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G 203 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYG 203 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCeEEEEecC
Confidence 44455677899999999 999999999999999999999999657777654
No 80
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=96.86 E-value=0.002 Score=48.74 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=34.6
Q ss_pred CCCCCeEEEEeCCcccHHHHhCCCceEEEe---cCChHHHHHHhchhcC
Q 048221 85 GKVPANTLVCGDSGNDAELFSVPDIYGVMV---SNSQEELLQWHAENAK 130 (181)
Q Consensus 85 ~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam---~Na~~~lk~~A~~v~~ 130 (181)
+-+.+.++++||+-||+.||+.++ .|++. .+++..+...|+.+..
T Consensus 90 kk~~~k~vmVGnGaND~laLr~AD-lGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREAD-LGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcc-cceEEeccCCcchHHHhhchhhhh
Confidence 345689999999999999999999 89776 3456666666665544
No 81
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.82 E-value=0.0013 Score=52.31 Aligned_cols=45 Identities=27% Similarity=0.291 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+..+++.+++++ +++++++++|||+.||+++.+.+|+.++.+..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g 195 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYG 195 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCcEEEECcC
Confidence 578899999999 999999999999999999999999667877644
No 82
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=96.78 E-value=0.0018 Score=51.21 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
+-..+..+++++ |++++++++|||+.+|+++.+.+|+..+.+.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~ 185 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCPSVLLT 185 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCeEEEEc
Confidence 457899999999 9999999999999999999999996666663
No 83
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.77 E-value=0.0073 Score=48.38 Aligned_cols=45 Identities=16% Similarity=0.124 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
.+...++.+++++ |++++++++|||+.||+++.+.+|...+.+..
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~ 193 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMRSIVVPA 193 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCEEEEecC
Confidence 4557899999999 99999999999999999999999965555554
No 84
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=96.75 E-value=0.0057 Score=59.41 Aligned_cols=54 Identities=19% Similarity=0.292 Sum_probs=44.6
Q ss_pred EEcCcEEEEeeCCCCHHHHHHHHHHHhhhC---CCCCCeEEEEeCCcc-cHHHHhCCC
Q 048221 55 FSSGMALDVLPKGAGKGQALAYVLKKFKID---GKVPANTLVCGDSGN-DAELFSVPD 108 (181)
Q Consensus 55 ~s~~~~leI~~~~~~Kg~al~~L~~~~~~~---~i~~~~~ia~GDs~N-Dl~Ml~~a~ 108 (181)
..|...+||-|.+++||.|++.|++++... .-+++-++++||..- |-.||++..
T Consensus 754 ~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 754 VQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred EeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 578999999999999999999999976211 124688999999765 999999865
No 85
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=96.74 E-value=0.0062 Score=49.25 Aligned_cols=83 Identities=29% Similarity=0.439 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC----CcccHHHHhCCC
Q 048221 33 AFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGD----SGNDAELFSVPD 108 (181)
Q Consensus 33 ~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD----s~NDl~Ml~~a~ 108 (181)
-++..+.++++|.+.|+.+ ...|...+|+.|+|-+|-.-++++-+. | .+++-.||| +.||.+.+....
T Consensus 159 R~K~v~~Lr~~F~~~gLtF--SIGGQISfDvFP~GWDKtyCLqhle~d----g--f~~IhFFGDkT~~GGNDyEIf~dpr 230 (252)
T KOG3189|consen 159 REKFVEALREEFADYGLTF--SIGGQISFDVFPKGWDKTYCLQHLEKD----G--FDTIHFFGDKTMPGGNDYEIFADPR 230 (252)
T ss_pred HHHHHHHHHHHhcccCeeE--EECCeEEEeecCCCcchhHHHHHhhhc----C--CceEEEeccccCCCCCcceeeeCCc
Confidence 3455678888888877555 456779999999999999999988543 3 368999999 899999998766
Q ss_pred ceEEEecCChHHHHH
Q 048221 109 IYGVMVSNSQEELLQ 123 (181)
Q Consensus 109 ~~~vam~Na~~~lk~ 123 (181)
..|..|.+..+-.+.
T Consensus 231 tiGhsV~~PdDT~~~ 245 (252)
T KOG3189|consen 231 TIGHSVTSPDDTVRI 245 (252)
T ss_pred cccccccCchHHHHH
Confidence 566666666655543
No 86
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.74 E-value=0.002 Score=51.66 Aligned_cols=40 Identities=20% Similarity=0.133 Sum_probs=32.0
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
..|..+++.+. ..+++++++|||.||++|++.|+ ..++-+
T Consensus 143 ~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad-~~~ar~ 182 (214)
T TIGR03333 143 CCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSD-LCFARD 182 (214)
T ss_pred CCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCC-eeEehH
Confidence 45888877663 34578999999999999999999 776644
No 87
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.71 E-value=0.0092 Score=45.10 Aligned_cols=44 Identities=23% Similarity=0.275 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
-+...++.+++++ ++++++++.|||+..|++.-+.+|+.++.+.
T Consensus 102 P~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~ 145 (147)
T TIGR01656 102 PKPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGLAAVLLV 145 (147)
T ss_pred CCHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence 5677899999999 9999999999999999999999996666554
No 88
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.68 E-value=0.015 Score=42.70 Aligned_cols=87 Identities=17% Similarity=0.214 Sum_probs=54.4
Q ss_pred CCceEEEEEecchhH---HHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCC-CCCCeEEEE
Q 048221 19 QRPHKISFFVEKFKA---FAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDG-KVPANTLVC 94 (181)
Q Consensus 19 ~~v~Ki~~~~~~~~~---~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~-i~~~~~ia~ 94 (181)
..-+++.+....... ..+.+.+...++..++......... ...--|...++++++++ + +++++++.|
T Consensus 39 ~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~------~~~KP~~~~~~~~~~~~---~~~~~~~~v~I 109 (132)
T TIGR01662 39 EAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACP------HCRKPKPGMFLEALKRF---NEIDPEESVYV 109 (132)
T ss_pred HCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECC------CCCCCChHHHHHHHHHc---CCCChhheEEE
Confidence 344667666643210 0012344445555554433222212 11224678999999999 7 999999999
Q ss_pred eC-CcccHHHHhCCCceEEEe
Q 048221 95 GD-SGNDAELFSVPDIYGVMV 114 (181)
Q Consensus 95 GD-s~NDl~Ml~~a~~~~vam 114 (181)
|| +.+|+.+-+.+|+.++.+
T Consensus 110 GD~~~~Di~~A~~~Gi~~i~~ 130 (132)
T TIGR01662 110 GDQDLTDLQAAKRAGLAFILV 130 (132)
T ss_pred cCCCcccHHHHHHCCCeEEEe
Confidence 99 799999999999655544
No 89
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.63 E-value=0.0095 Score=46.42 Aligned_cols=44 Identities=18% Similarity=0.189 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
...+...++++ |++++++++|||+.+|+.+-+.+|..++.+..+
T Consensus 106 p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g 149 (181)
T PRK08942 106 PGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTG 149 (181)
T ss_pred HHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCC
Confidence 57788899999 999999999999999999999999666666554
No 90
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=96.61 E-value=0.0024 Score=62.86 Aligned_cols=56 Identities=21% Similarity=0.303 Sum_probs=42.2
Q ss_pred EeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcC
Q 048221 63 VLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAK 130 (181)
Q Consensus 63 I~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~ 130 (181)
+.|. .|..-++.|.+. | .-|..+|||-||.++|+.|+ .|++|++++ +..+|+++..
T Consensus 785 ~sP~--qK~~iV~~lq~~----g---~~V~m~GDG~ND~~ALK~Ad-VGIam~~~d--as~AA~f~l~ 840 (1054)
T TIGR01657 785 MAPD--QKETLVELLQKL----D---YTVGMCGDGANDCGALKQAD-VGISLSEAE--ASVAAPFTSK 840 (1054)
T ss_pred cCHH--HHHHHHHHHHhC----C---CeEEEEeCChHHHHHHHhcC-cceeecccc--ceeecccccC
Confidence 4453 688888877643 3 36999999999999999999 899999874 3345555544
No 91
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=96.58 E-value=0.0034 Score=61.77 Aligned_cols=60 Identities=27% Similarity=0.332 Sum_probs=45.8
Q ss_pred EEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChH-HHHHHhchhcC
Q 048221 62 DVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQE-ELLQWHAENAK 130 (181)
Q Consensus 62 eI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~-~lk~~A~~v~~ 130 (181)
-+.|. .|+.-++.+.+.. | ..|+++|||.||.+||+.|+ .||.+..... ..+..|+++..
T Consensus 750 R~sP~--qK~~IV~~lk~~~---~---~~vl~iGDG~ND~~mlk~Ad-VGIgi~g~eg~qA~~aaD~~i~ 810 (1057)
T TIGR01652 750 RVSPS--QKADVVRLVKKST---G---KTTLAIGDGANDVSMIQEAD-VGVGISGKEGMQAVMASDFAIG 810 (1057)
T ss_pred CCCHH--HHHHHHHHHHhcC---C---CeEEEEeCCCccHHHHhhcC-eeeEecChHHHHHHHhhhhhhh
Confidence 45554 7998888887654 2 46999999999999999999 8998865443 36666776654
No 92
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.47 E-value=0.0031 Score=48.75 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
+|..+++.+...... +.+...++++|||.||++||+
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 599999999211111 356789999999999999986
No 93
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.37 E-value=0.0045 Score=47.67 Aligned_cols=41 Identities=17% Similarity=0.137 Sum_probs=33.3
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEE
Q 048221 66 KGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 66 ~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
.+..|...++.+++++ +++++++|||.||+++.+.++ ..+|
T Consensus 146 ~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d-~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSD-VVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCC-cccc
Confidence 3456988888886652 578999999999999999998 6654
No 94
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=96.35 E-value=0.009 Score=40.05 Aligned_cols=44 Identities=27% Similarity=0.388 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEEeCC-cccHHHHhCCCceEEEecCCh
Q 048221 72 QALAYVLKKFKIDGKVPANTLVCGDS-GNDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 72 ~al~~L~~~~~~~~i~~~~~ia~GDs-~NDl~Ml~~a~~~~vam~Na~ 118 (181)
..+...++++ +++++++++|||+ ..|+.+-+.+|+.++.|..+.
T Consensus 8 ~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~ 52 (75)
T PF13242_consen 8 GMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGV 52 (75)
T ss_dssp HHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSS
T ss_pred HHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCC
Confidence 4567788888 9999999999999 999999999998899888754
No 95
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.32 E-value=0.0044 Score=49.78 Aligned_cols=38 Identities=21% Similarity=0.119 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEE
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
..|..+++. + +..+.+++++|||.||+++.+.+| ..++
T Consensus 147 ~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag-~~~a 184 (219)
T PRK09552 147 CCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQAD-KVFA 184 (219)
T ss_pred CchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCC-ccee
Confidence 347776654 4 677789999999999999999999 6666
No 96
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=96.23 E-value=0.0065 Score=57.04 Aligned_cols=41 Identities=29% Similarity=0.481 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
.-|++-++.|.++- + ..+.++|||+||++|++.|+ .|+-+-
T Consensus 767 tQKA~v~~llq~~t---~---krvc~IGDGGNDVsMIq~A~-~GiGI~ 807 (1051)
T KOG0210|consen 767 TQKAQVVRLLQKKT---G---KRVCAIGDGGNDVSMIQAAD-VGIGIV 807 (1051)
T ss_pred hHHHHHHHHHHHhh---C---ceEEEEcCCCccchheeecc-cceeee
Confidence 47999888887776 4 68999999999999999988 677553
No 97
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.19 E-value=0.017 Score=44.92 Aligned_cols=44 Identities=20% Similarity=0.150 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceE-EEecC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYG-VMVSN 116 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~-vam~N 116 (181)
+...+...++++ +++++++++|||+..|+..-+.+|+.. +.+.-
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~ 152 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRT 152 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCcEEEEEec
Confidence 577888999999 999999999999999999999999333 34443
No 98
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=96.16 E-value=0.013 Score=47.30 Aligned_cols=45 Identities=29% Similarity=0.338 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
.-..+..+++++ |+++++++.+||+.+|+.|-+.||+.++.+..+
T Consensus 147 ~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g 191 (220)
T COG0546 147 DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGVPAVGVTWG 191 (220)
T ss_pred CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCCCEEEEECC
Confidence 457888999999 898779999999999999999998444656554
No 99
>PLN03190 aminophospholipid translocase; Provisional
Probab=96.15 E-value=0.0082 Score=59.81 Aligned_cols=58 Identities=29% Similarity=0.345 Sum_probs=41.8
Q ss_pred EEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChH--HHHHHhchhc
Q 048221 62 DVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQE--ELLQWHAENA 129 (181)
Q Consensus 62 eI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~--~lk~~A~~v~ 129 (181)
-+.|. .|+.-++.+.+.. ..-|+++|||.||.+|++.|+ .||.+. +.+ .....||+..
T Consensus 853 R~sP~--QKa~IV~~vk~~~------~~vtlaIGDGaNDv~mIq~Ad-VGIGIs-G~EG~qA~~aSDfaI 912 (1178)
T PLN03190 853 RVAPL--QKAGIVALVKNRT------SDMTLAIGDGANDVSMIQMAD-VGVGIS-GQEGRQAVMASDFAM 912 (1178)
T ss_pred cCCHH--HHHHHHHHHHhcC------CcEEEEECCCcchHHHHHhcC-eeeeec-CchhHHHHHhhccch
Confidence 35564 7988888776553 245999999999999999999 899765 333 3444555544
No 100
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.13 E-value=0.044 Score=47.86 Aligned_cols=58 Identities=19% Similarity=0.083 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhc
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENA 129 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~ 129 (181)
-|-..+..+++++ ++++++++.|||+.+|+..-+.+|+..+.++-+.-....++.+.+
T Consensus 105 P~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~~~~~~~i~~~l~ 162 (354)
T PRK05446 105 PKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIKGIRYARETLNWDAIAEQLT 162 (354)
T ss_pred CCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCeEEEEECCCCCHHHHHHHHh
Confidence 4566888888888 999999999999999999999999777777544433444444433
No 101
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.05 E-value=0.048 Score=44.16 Aligned_cols=46 Identities=20% Similarity=0.082 Sum_probs=38.2
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCce-EEEecCChH
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIY-GVMVSNSQE 119 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~-~vam~Na~~ 119 (181)
....+.+++++ |++++++++|||+.+|+..-+.+|.. .+.+.++..
T Consensus 152 p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~~~ 198 (224)
T PRK14988 152 QRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNPDS 198 (224)
T ss_pred HHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCCCC
Confidence 56789999999 99999999999999999999999942 244566543
No 102
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=96.01 E-value=0.012 Score=56.16 Aligned_cols=55 Identities=16% Similarity=0.134 Sum_probs=44.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-CChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-NSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-Na~~~lk~~A~~v~~~ 131 (181)
.|-.-++.|.++- +-+..-|||-||.|-|+.|+ .|+||| ++.+-.|.+++.+..+
T Consensus 665 HK~kIVeaLq~~g-------eivAMTGDGVNDApALK~Ad-IGIAMG~~GTdVaKeAsDMVL~D 720 (972)
T KOG0202|consen 665 HKLKIVEALQSRG-------EVVAMTGDGVNDAPALKKAD-IGIAMGISGTDVAKEASDMVLAD 720 (972)
T ss_pred hHHHHHHHHHhcC-------CEEEecCCCccchhhhhhcc-cceeecCCccHhhHhhhhcEEec
Confidence 5777777775443 33555699999999999999 799999 9999999988876643
No 103
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.98 E-value=0.018 Score=42.99 Aligned_cols=41 Identities=29% Similarity=0.356 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEE
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGV 112 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~v 112 (181)
.+....+.+++++ +++++++++|||+..|+.+-+.+|+.+|
T Consensus 134 p~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~~~i 174 (176)
T PF13419_consen 134 PDPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGIKTI 174 (176)
T ss_dssp TSHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTSEEE
T ss_pred hHHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCCeEE
Confidence 4468899999999 9999999999999999999999995444
No 104
>PRK06769 hypothetical protein; Validated
Probab=95.96 E-value=0.038 Score=43.00 Aligned_cols=44 Identities=18% Similarity=0.114 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
-..+...++++ +++++++++|||+.+|+..-+.+|+.++.+..+
T Consensus 96 p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g 139 (173)
T PRK06769 96 TGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNATTILVRTG 139 (173)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 45778888888 999999999999999999999999877777654
No 105
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=95.91 E-value=0.06 Score=45.30 Aligned_cols=52 Identities=21% Similarity=0.438 Sum_probs=46.4
Q ss_pred EEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 54 IFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 54 ~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
+..|...+|+-|.+++||.+++++++.. .....-+++.||..-|-.||+++.
T Consensus 167 v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 167 VTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred EEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhc
Confidence 3567899999999999999999999998 665567999999999999999877
No 106
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=95.82 E-value=0.043 Score=44.98 Aligned_cols=45 Identities=13% Similarity=0.014 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
-+...+...++++ +++++++++|||+..|+..-+.+|+..+.+..
T Consensus 165 P~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~ 209 (248)
T PLN02770 165 PHPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTT 209 (248)
T ss_pred CChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCEEEEEeC
Confidence 3456788999999 99999999999999999999999976676754
No 107
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.79 E-value=0.04 Score=43.69 Aligned_cols=45 Identities=18% Similarity=0.249 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na 117 (181)
+....+.+++++ |++++++++||||. +|+..-+.+|+.++.+...
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~ 197 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG 197 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence 446889999999 99999999999998 9999999999767777654
No 108
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=95.75 E-value=0.016 Score=52.41 Aligned_cols=51 Identities=24% Similarity=0.215 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCC
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKD 131 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~ 131 (181)
-+|..-++.+++. | ..+.++||+.||.+|++.++ .|++|+ .+..|+.+..+
T Consensus 393 ~~K~~~v~~l~~~----g---~~v~~vGDg~nD~~al~~Ad-vgia~~-----a~~~adivl~~ 443 (499)
T TIGR01494 393 EEKAALVEALQKK----G---RVVAMTGDGVNDAPALKKAD-VGIAMG-----AKAAADIVLLD 443 (499)
T ss_pred HHHHHHHHHHHHC----C---CEEEEECCChhhHHHHHhCC-Cccccc-----hHHhCCeEEec
Confidence 3677777766433 3 57999999999999999999 899997 36666666554
No 109
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.74 E-value=0.0099 Score=45.78 Aligned_cols=43 Identities=14% Similarity=0.216 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEe
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMV 114 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam 114 (181)
-+....++.++++ +++++++++|||+.+|+..-+.+|+..+++
T Consensus 142 p~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~~~i~v 184 (185)
T TIGR01990 142 PDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGMFAVGV 184 (185)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence 4577788999999 999999999999999999999999655543
No 110
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.61 E-value=0.021 Score=54.85 Aligned_cols=63 Identities=21% Similarity=0.258 Sum_probs=51.9
Q ss_pred EEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCC
Q 048221 60 ALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDN 132 (181)
Q Consensus 60 ~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~ 132 (181)
+-|+.| ..|.+=++.|.+.- ..+..+|||.||.|-|..++ .|++|+.+++-..+.|+.+.=.|
T Consensus 766 ~aev~P--~~K~~~Ik~lq~~~-------~~VaMVGDGINDaPALA~Ad-VGIaig~gs~vAieaADIVLmrn 828 (951)
T KOG0207|consen 766 YAEVLP--EQKAEKIKEIQKNG-------GPVAMVGDGINDAPALAQAD-VGIAIGAGSDVAIEAADIVLMRN 828 (951)
T ss_pred EeccCc--hhhHHHHHHHHhcC-------CcEEEEeCCCCccHHHHhhc-cceeeccccHHHHhhCCEEEEcc
Confidence 446666 47888888886653 35999999999999999999 89999999988888888776544
No 111
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.48 E-value=0.066 Score=47.26 Aligned_cols=46 Identities=17% Similarity=0.286 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCCh
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~ 118 (181)
+.......++++ |++++++++|||+.+|+..-+.+|+..|.+.+..
T Consensus 274 ~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~ 319 (381)
T PLN02575 274 DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMKCVAVASKH 319 (381)
T ss_pred CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCC
Confidence 457888999999 9999999999999999999999998777777643
No 112
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.46 E-value=0.058 Score=42.22 Aligned_cols=43 Identities=16% Similarity=0.091 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
+....+.+++++ |++++++++|||+.+|+..-+.+|+.++.+.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~ 192 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGFKTAWVN 192 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCCcEEEec
Confidence 356788999999 9999999999999999999999996555554
No 113
>PRK11587 putative phosphatase; Provisional
Probab=95.43 E-value=0.03 Score=44.76 Aligned_cols=46 Identities=13% Similarity=0.059 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCCh
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~ 118 (181)
+.......++++ |++++++++||||.+|+..-+.+|+.++++.++.
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCEEEEECCCC
Confidence 356778888899 9999999999999999999999997778887654
No 114
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=95.42 E-value=0.062 Score=43.88 Aligned_cols=45 Identities=18% Similarity=0.019 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhhhCCCC-CCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKV-PANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~-~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+-..+...++++ |+. ++++++||||.+|+..-+.+|+..+.+..+
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILS 203 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCCeEEEEecC
Confidence 346778888899 985 899999999999999999999888887654
No 115
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=95.17 E-value=0.025 Score=47.80 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=31.5
Q ss_pred CCCHHHHHH-HHHHHhhhCC--CCCCeEEEEeCCcccHHHHhCC
Q 048221 67 GAGKGQALA-YVLKKFKIDG--KVPANTLVCGDSGNDAELFSVP 107 (181)
Q Consensus 67 ~~~Kg~al~-~L~~~~~~~~--i~~~~~ia~GDs~NDl~Ml~~a 107 (181)
..+|...+. ..++.+ + .++++++++|||.||++|...+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357887766 577777 7 8899999999999999998765
No 116
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.05 E-value=0.024 Score=43.62 Aligned_cols=40 Identities=13% Similarity=0.240 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEE
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGV 112 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~v 112 (181)
+....+++++++ +++++++++|||+.+|+.+-+.+|+.++
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~~~i 183 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGMFAV 183 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence 345788899999 9999999999999999999999995443
No 117
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=95.04 E-value=0.13 Score=42.57 Aligned_cols=45 Identities=16% Similarity=-0.078 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhhCCCC-CCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKV-PANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~-~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+-..+...++++ |+. ++++++||||.+|+..-+.+|+..+.+..+
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 356788888999 986 689999999999999999999877777654
No 118
>PRK08238 hypothetical protein; Validated
Probab=94.99 E-value=0.068 Score=48.51 Aligned_cols=50 Identities=24% Similarity=0.351 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhc
Q 048221 67 GAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHA 126 (181)
Q Consensus 67 ~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~ 126 (181)
+..|...++ +.+ + .+++..+|||.+|++|++.++ .+++|+... .+.+.|.
T Consensus 126 g~~K~~~l~---~~l---~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn~~~-~l~~~a~ 175 (479)
T PRK08238 126 GAAKAAALV---EAF---G--ERGFDYAGNSAADLPVWAAAR-RAIVVGASP-GVARAAR 175 (479)
T ss_pred CchHHHHHH---HHh---C--ccCeeEecCCHHHHHHHHhCC-CeEEECCCH-HHHHHHH
Confidence 345655544 455 3 345788999999999999999 999987554 4666554
No 119
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=94.97 E-value=0.036 Score=46.67 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
...+..+++++ |++++++++|||+.+|+.+-+.+|+..+++..+
T Consensus 205 p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g 248 (286)
T PLN02779 205 PDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSS 248 (286)
T ss_pred HHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCEEEEEccC
Confidence 45888899999 999999999999999999999999766666554
No 120
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=94.86 E-value=0.16 Score=41.32 Aligned_cols=44 Identities=14% Similarity=0.148 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
.+......+++++ |+++++++++||+..|+..-+.+|..++.+.
T Consensus 153 P~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~ 196 (220)
T TIGR01691 153 TEAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLHTGQLV 196 (220)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCEEEEEE
Confidence 4567889999999 9999999999999999999999995555543
No 121
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.77 E-value=0.041 Score=45.44 Aligned_cols=44 Identities=23% Similarity=0.205 Sum_probs=35.6
Q ss_pred EeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhC
Q 048221 63 VLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSV 106 (181)
Q Consensus 63 I~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~ 106 (181)
..|.+..|+..++.+++.....|.+.++++.+|||.||+.....
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 34667799999999998842227788999999999999987754
No 122
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=94.50 E-value=0.045 Score=49.90 Aligned_cols=39 Identities=33% Similarity=0.505 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N 116 (181)
|..+++ +.+ |.+... ++.|||.||.+||+.++ ++++++.
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~-e~y~V~~ 215 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICK-EGYMVPR 215 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCC-ccEEeCC
Confidence 777776 555 655445 89999999999999999 9999997
No 123
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=94.46 E-value=0.031 Score=55.34 Aligned_cols=46 Identities=33% Similarity=0.398 Sum_probs=35.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHH
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELL 122 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk 122 (181)
-|+.-++-+.+.. ...++|||||-||++|++.|+ .||-++ +.+..+
T Consensus 781 QKA~Vv~lVk~~~------~~~TLAIGDGANDVsMIQ~Ah-VGVGIs-G~EGmQ 826 (1151)
T KOG0206|consen 781 QKALVVKLVKKGL------KAVTLAIGDGANDVSMIQEAH-VGVGIS-GQEGMQ 826 (1151)
T ss_pred HHHHHHHHHHhcC------CceEEEeeCCCccchheeeCC-cCeeec-cchhhh
Confidence 5777777774343 457999999999999999999 788877 333333
No 124
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=94.42 E-value=0.053 Score=43.12 Aligned_cols=44 Identities=20% Similarity=0.092 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhhhCCCC-CCeEEEEeCCcccHHHHhCCCceE-EEecC
Q 048221 70 KGQALAYVLKKFKIDGKV-PANTLVCGDSGNDAELFSVPDIYG-VMVSN 116 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~-~~~~ia~GDs~NDl~Ml~~a~~~~-vam~N 116 (181)
+...+...++++ +++ ++++++|||+.+|+.+-+.+|+.. +.+..
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~ 192 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLT 192 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEec
Confidence 568899999999 997 799999999999999999999433 34443
No 125
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.35 E-value=0.071 Score=40.65 Aligned_cols=39 Identities=26% Similarity=0.279 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEE
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGV 112 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~v 112 (181)
....+.+++++ +++++++++|||+..|+..-+.+|+.++
T Consensus 143 ~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~~~i 181 (183)
T TIGR01509 143 PDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGMHTV 181 (183)
T ss_pred HHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCCEEE
Confidence 67888999999 9999999999999999999999995444
No 126
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=94.25 E-value=0.16 Score=48.84 Aligned_cols=75 Identities=21% Similarity=0.206 Sum_probs=51.0
Q ss_pred HHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecC-
Q 048221 38 KALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSN- 116 (181)
Q Consensus 38 ~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~N- 116 (181)
+++.+.+..+ ..+.+.++++..-.++-.+ |+++ | +=+.+.||+-||.|.|+.|+ .|||||=
T Consensus 672 ~qld~il~nh-~eIVFARTSPqQKLiIVe~----------cQr~---G---aiVaVTGDGVNDsPALKKAD-IGVAMGia 733 (1019)
T KOG0203|consen 672 EQLDELLQNH-QEIVFARTSPQQKLIIVEG----------CQRQ---G---AIVAVTGDGVNDSPALKKAD-IGVAMGIA 733 (1019)
T ss_pred HHHHHHHHhC-CceEEEecCccceEEeEhh----------hhhc---C---cEEEEeCCCcCCChhhcccc-cceeeccc
Confidence 3444444443 2466667776555555443 4555 4 34666799999999999999 8999984
Q ss_pred ChHHHHHHhchhcC
Q 048221 117 SQEELLQWHAENAK 130 (181)
Q Consensus 117 a~~~lk~~A~~v~~ 130 (181)
+++-.|+.|+.+.-
T Consensus 734 GSDvsKqAADmILL 747 (1019)
T KOG0203|consen 734 GSDVSKQAADMILL 747 (1019)
T ss_pred cchHHHhhcceEEe
Confidence 56677787777654
No 127
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.13 E-value=0.083 Score=41.74 Aligned_cols=48 Identities=17% Similarity=0.331 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHH
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEEL 121 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~l 121 (181)
....+..++++ |++++++++|||+..|+.+-+.+|+.++.+.+...-.
T Consensus 155 p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~~~~~~ 202 (211)
T TIGR02247 155 PRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGITTIKVSDEEQAI 202 (211)
T ss_pred HHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCCEEEEECCHHHHH
Confidence 55788888999 9999999999999999999999997777776544333
No 128
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.06 E-value=0.087 Score=39.89 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=27.2
Q ss_pred HHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 74 LAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 74 l~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
....++++ |.+++++++|||+.+|+.+-..++
T Consensus 104 ~~k~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ng 135 (148)
T smart00577 104 YVKDLSLL---GRDLSNVIIIDDSPDSWPFHPENL 135 (148)
T ss_pred EeecHHHc---CCChhcEEEEECCHHHhhcCccCE
Confidence 55556777 999999999999999999887655
No 129
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.02 E-value=0.056 Score=40.44 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=32.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
.+...+.++++++ ++++ +++++||+..|+.+-+.+|
T Consensus 119 p~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 119 PEPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred cCHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 4678999999999 9998 9999999999999887664
No 130
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.86 E-value=0.08 Score=40.87 Aligned_cols=43 Identities=14% Similarity=0.132 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEe
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMV 114 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam 114 (181)
-+-..+.+.++++ +++++++++|||+..|++.-+.+|+..+++
T Consensus 143 P~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~~~i~~ 185 (188)
T PRK10725 143 PAPDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGMDAVDV 185 (188)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCCEEEee
Confidence 3556799999999 999999999999999999999999655544
No 131
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=93.78 E-value=0.11 Score=43.00 Aligned_cols=55 Identities=22% Similarity=0.192 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceE-EEec-CChHHHHHHhc
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYG-VMVS-NSQEELLQWHA 126 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~-vam~-Na~~~lk~~A~ 126 (181)
.-|+.-++.+++.- +++.. .+++|||.-|+.||+.+.-.| .+++ |+.....+.|+
T Consensus 190 g~ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNGNeYal~eAd 246 (315)
T COG4030 190 GEKAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNGNEYALKEAD 246 (315)
T ss_pred cchhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhccCceEEEecCCcccccccc
Confidence 46777778888776 77665 899999999999999853233 5554 56555444444
No 132
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=93.71 E-value=0.056 Score=49.45 Aligned_cols=55 Identities=18% Similarity=0.113 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~ 131 (181)
+|-..++.-+.+= .-+...||+.||.|.|..++ .|++|+++....|+.|+.+.-+
T Consensus 497 dK~~~I~~eQ~~g-------rlVAMtGDGTNDAPALAqAd-Vg~AMNsGTqAAkEAaNMVDLD 551 (681)
T COG2216 497 DKLALIRQEQAEG-------RLVAMTGDGTNDAPALAQAD-VGVAMNSGTQAAKEAANMVDLD 551 (681)
T ss_pred HHHHHHHHHHhcC-------cEEEEcCCCCCcchhhhhcc-hhhhhccccHHHHHhhcccccC
Confidence 5655555544332 34777899999999999999 8999999999999999877643
No 133
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=93.59 E-value=0.3 Score=41.71 Aligned_cols=38 Identities=16% Similarity=0.140 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 68 AGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
-.|...++.+++++ |++++++++|||+..|+...+.+.
T Consensus 86 ~pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~l 123 (320)
T TIGR01686 86 GPKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITL 123 (320)
T ss_pred CchHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHC
Confidence 48999999999999 999999999999999999998866
No 134
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=93.59 E-value=0.097 Score=43.58 Aligned_cols=43 Identities=21% Similarity=0.340 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
+-..+...++++ |++++++++||||.+|+..-+.+|+..+++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCEEEEEe
Confidence 356788999999 9999999999999999999999996666665
No 135
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.57 E-value=0.047 Score=44.05 Aligned_cols=61 Identities=18% Similarity=0.194 Sum_probs=42.5
Q ss_pred EEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEec-C-ChHHHHHHhch
Q 048221 61 LDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVS-N-SQEELLQWHAE 127 (181)
Q Consensus 61 leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~-N-a~~~lk~~A~~ 127 (181)
-+-+..+-.|+.+++.+++.+ +.+.++.+||+.||++|...++ .-++-+ | -.+.+|.-|+|
T Consensus 151 ~~ptsdsggKa~~i~~lrk~~-----~~~~~~mvGDGatDlea~~pa~-afi~~~g~~~r~~vk~nak~ 213 (227)
T KOG1615|consen 151 NEPTSDSGGKAEVIALLRKNY-----NYKTIVMVGDGATDLEAMPPAD-AFIGFGGNVIREGVKANAKW 213 (227)
T ss_pred CCccccCCccHHHHHHHHhCC-----ChheeEEecCCccccccCCchh-hhhccCCceEcHhhHhccHH
Confidence 344566778999999998754 6789999999999999998766 333322 2 23455544443
No 136
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=93.36 E-value=0.13 Score=49.53 Aligned_cols=56 Identities=20% Similarity=0.108 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC-hHHHHHHhchhcC
Q 048221 67 GAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS-QEELLQWHAENAK 130 (181)
Q Consensus 67 ~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na-~~~lk~~A~~v~~ 130 (181)
..||-.-++-|.++- +-+.+-|||.||-|.|+.|+ .|++||=| .+-.|+.++.+.-
T Consensus 724 P~DK~lLVk~L~~~g-------~VVAVTGDGTNDaPALkeAD-VGlAMGIaGTeVAKEaSDIIi~ 780 (1034)
T KOG0204|consen 724 PNDKHLLVKGLIKQG-------EVVAVTGDGTNDAPALKEAD-VGLAMGIAGTEVAKEASDIIIL 780 (1034)
T ss_pred CchHHHHHHHHHhcC-------cEEEEecCCCCCchhhhhcc-cchhccccchhhhhhhCCeEEE
Confidence 357887777776443 23555699999999999999 89999965 5555665555443
No 137
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=93.13 E-value=0.16 Score=39.89 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+....+..++++ |++++++++|||+..|+..-+.+|+.++.+.++
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 466778889999 999999999999999999999999666666553
No 138
>PLN02811 hydrolase
Probab=92.94 E-value=0.21 Score=39.96 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhhhCC---CCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 71 GQALAYVLKKFKIDG---KVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 71 g~al~~L~~~~~~~~---i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
-......++++ + ++++++++|||+..|+..-+.+|+..+.+...
T Consensus 140 p~~~~~a~~~~---~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~~ 186 (220)
T PLN02811 140 PDIFLAAARRF---EDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPDP 186 (220)
T ss_pred cHHHHHHHHHh---CCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeCC
Confidence 34778888888 6 99999999999999999999999777777654
No 139
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=92.72 E-value=0.57 Score=36.88 Aligned_cols=49 Identities=16% Similarity=0.140 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHhhhC---CCCCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 67 GAGKGQALAYVLKKFKID---GKVPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 67 ~~~Kg~al~~L~~~~~~~---~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
...|......+++.+.+. +++++++++|||+..|+..-+.+|+..+.+.
T Consensus 106 ~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~ 157 (174)
T TIGR01685 106 KPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCP 157 (174)
T ss_pred CCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcC
Confidence 345666666666665211 3889999999999999999999996555543
No 140
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=92.66 E-value=0.16 Score=39.29 Aligned_cols=47 Identities=19% Similarity=0.148 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCCh
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na~ 118 (181)
-+...+..+++++ +++++++++|||+. .|+..-+.+|+.++.+..+.
T Consensus 92 P~p~~~~~~l~~~---~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~ 139 (170)
T TIGR01668 92 PPGCAFRRAHPEM---GLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLV 139 (170)
T ss_pred CChHHHHHHHHHc---CCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCc
Confidence 4577899999999 99999999999998 79999999997777776543
No 141
>PLN02940 riboflavin kinase
Probab=92.62 E-value=0.16 Score=44.61 Aligned_cols=46 Identities=17% Similarity=0.089 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
-+.......++++ |++++++++|||+.+|+..-+.+|+..+.+...
T Consensus 151 P~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g 196 (382)
T PLN02940 151 PSPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSI 196 (382)
T ss_pred CCHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 3467889999999 999999999999999999999999777777654
No 142
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=92.59 E-value=0.67 Score=35.90 Aligned_cols=35 Identities=11% Similarity=0.209 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhhhCC--CCCCeEEEEeCCc--------ccHHHHhCCC
Q 048221 71 GQALAYVLKKFKIDG--KVPANTLVCGDSG--------NDAELFSVPD 108 (181)
Q Consensus 71 g~al~~L~~~~~~~~--i~~~~~ia~GDs~--------NDl~Ml~~a~ 108 (181)
...++.+++++ + +++++++.|||+. +|+..-+.+|
T Consensus 111 p~~~~~~~~~~---~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aG 155 (166)
T TIGR01664 111 TGMWEYLQSQY---NSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLG 155 (166)
T ss_pred cHHHHHHHHHc---CCCCCchhcEEEECCCCCCCCCchhHHHHHHHCC
Confidence 56889999999 8 9999999999986 7999999888
No 143
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=92.58 E-value=0.11 Score=41.29 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEE
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
+.......++++ |+++++++.|||+.+|+..-+.+| ..++
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG-~~~i 183 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAG-MEVF 183 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCC-CEEE
Confidence 468899999999 999999999999999999999999 4554
No 144
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.57 E-value=0.14 Score=42.22 Aligned_cols=56 Identities=20% Similarity=0.261 Sum_probs=43.2
Q ss_pred cEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccH-HHHhCCCceEEEec
Q 048221 59 MALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDA-ELFSVPDIYGVMVS 115 (181)
Q Consensus 59 ~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl-~Ml~~a~~~~vam~ 115 (181)
......|.+-.||.-+.++....-..|+..++++.+|||.||+ |+++... .-|+|.
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~-~D~amp 209 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRA-CDVAMP 209 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhccc-Cceecc
Confidence 4455688889999999998777645599999999999999998 4555544 455654
No 145
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=92.56 E-value=0.17 Score=39.07 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceE
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYG 111 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~ 111 (181)
+-...+++++++ |++++++++|||+..|+..-+.+|+.+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 456889999999 999999999999999999999999433
No 146
>PHA02597 30.2 hypothetical protein; Provisional
Probab=92.15 E-value=0.19 Score=39.29 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC--CceEEEecCCh
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP--DIYGVMVSNSQ 118 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a--~~~~vam~Na~ 118 (181)
.|-..++.+++++ | ++++++|||+.+|+..-+.+ |+..+.+..+.
T Consensus 131 ~kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 131 SKEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred ccHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 4678899999999 8 78899999999999999998 97777776654
No 147
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=92.08 E-value=0.18 Score=39.47 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCc
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDI 109 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~ 109 (181)
....+++++++ |+++++++.|||+. +|+..-+.+|+
T Consensus 163 ~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 163 PKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 45688899999 99999999999997 99999999883
No 148
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=91.62 E-value=0.38 Score=39.58 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCCh
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na~ 118 (181)
+....+.+++.+ ++++++++.+||+. .|+.+-+.+|..++.+..+.
T Consensus 180 ~~~~~~~~~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~~G~ 226 (249)
T TIGR01457 180 NAIIMEKAVEHL---GTEREETLMVGDNYLTDIRAGIDAGIDTLLVHTGV 226 (249)
T ss_pred hHHHHHHHHHHc---CCCcccEEEECCCchhhHHHHHHcCCcEEEEcCCC
Confidence 356778888888 99999999999996 89999999997788887654
No 149
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=91.52 E-value=0.2 Score=39.28 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSV 106 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~ 106 (181)
+-..+..+++++ |++++++++|||+.+|+..-+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 466788888999 9999999999999999987653
No 150
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=91.27 E-value=0.95 Score=40.54 Aligned_cols=44 Identities=16% Similarity=0.199 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
.|-..+...++++ + ++++++|||+.+|+.+-+.+|...+.+...
T Consensus 386 ~kP~~~~~al~~l---~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~ 429 (459)
T PRK06698 386 NKSDLVKSILNKY---D--IKEAAVVGDRLSDINAAKDNGLIAIGCNFD 429 (459)
T ss_pred CCcHHHHHHHHhc---C--cceEEEEeCCHHHHHHHHHCCCeEEEEeCC
Confidence 4666777777666 4 589999999999999999999666666543
No 151
>PRK10444 UMP phosphatase; Provisional
Probab=91.12 E-value=0.37 Score=39.84 Aligned_cols=47 Identities=15% Similarity=0.098 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCCh
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na~ 118 (181)
-+...++.+++++ ++++++++.+||+. .|+.+-+.+|+.++.+..+.
T Consensus 175 P~~~~~~~~~~~~---~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~ 222 (248)
T PRK10444 175 PSPWIIRAALNKM---QAHSEETVIVGDNLRTDILAGFQAGLETILVLSGV 222 (248)
T ss_pred CCHHHHHHHHHHc---CCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCC
Confidence 3556788888888 99999999999996 89999999998888887553
No 152
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=90.92 E-value=0.25 Score=47.65 Aligned_cols=34 Identities=35% Similarity=0.468 Sum_probs=30.3
Q ss_pred eEEEEeCCcccHHHHhCCCceEEEecCChHHHHHH
Q 048221 90 NTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQW 124 (181)
Q Consensus 90 ~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~ 124 (181)
-++.+|||.||+..|+.|+ .||+.-|++++.++.
T Consensus 808 ~TLMCGDGTNDVGALK~Ah-VGVALL~~~~e~~~~ 841 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQAH-VGVALLNNPEESKKD 841 (1160)
T ss_pred EEEEecCCCcchhhhhhcc-cceehhcCChhhhhH
Confidence 6999999999999999999 899999988865544
No 153
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=90.90 E-value=0.46 Score=39.65 Aligned_cols=44 Identities=7% Similarity=-0.081 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhhhCCC-CCCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 69 GKGQALAYVLKKFKIDGK-VPANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i-~~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
.....+...++++ +. +++++++|||+.+|+.+-+.+|+..+.+.
T Consensus 252 p~p~~~~~~l~~~---~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~ 296 (300)
T PHA02530 252 PDDVVKEEIFWEK---IAPKYDVLLAVDDRDQVVDMWRRIGLECWQVA 296 (300)
T ss_pred CcHHHHHHHHHHH---hccCceEEEEEcCcHHHHHHHHHhCCeEEEec
Confidence 3344677777777 77 57999999999999999999996555554
No 154
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=90.42 E-value=0.42 Score=39.87 Aligned_cols=42 Identities=24% Similarity=0.297 Sum_probs=36.5
Q ss_pred HHHHHHHHhhhCCCCCCeEEEEeCC-cccHHHHhCCCceEEEecCC
Q 048221 73 ALAYVLKKFKIDGKVPANTLVCGDS-GNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 73 al~~L~~~~~~~~i~~~~~ia~GDs-~NDl~Ml~~a~~~~vam~Na 117 (181)
.++.+++++ ++++++++.|||+ ..|+.+-+.+|+.++.|..+
T Consensus 207 ~~~~~~~~~---~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V~~G 249 (279)
T TIGR01452 207 MFECITENF---SIDPARTLMVGDRLETDILFGHRCGMTTVLVLSG 249 (279)
T ss_pred HHHHHHHHh---CCChhhEEEECCChHHHHHHHHHcCCcEEEECCC
Confidence 567778888 9999999999999 59999999999888888655
No 155
>PLN02645 phosphoglycolate phosphatase
Probab=89.72 E-value=0.6 Score=39.72 Aligned_cols=45 Identities=18% Similarity=0.178 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCCh
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na~ 118 (181)
-..++.+++++ ++++++++.|||+. +|+.+-+.+|+.++.+..+.
T Consensus 233 p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~ 278 (311)
T PLN02645 233 TFMMDYLANKF---GIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGV 278 (311)
T ss_pred HHHHHHHHHHc---CCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCC
Confidence 34677788888 99999999999997 99999999998888886553
No 156
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=89.54 E-value=0.97 Score=35.46 Aligned_cols=55 Identities=20% Similarity=0.232 Sum_probs=41.0
Q ss_pred CcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 58 GMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 58 ~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
..++||.|. +|.+=++.|.+.. |++.+++++|=|-..-..-.+..|+.++-+.|+
T Consensus 99 F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~G 153 (169)
T PF12689_consen 99 FDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDG 153 (169)
T ss_dssp ECEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-EEEE-SSS
T ss_pred cchhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCcEEEEeCCC
Confidence 366999996 9999999999999 999999999999888888888788666666653
No 157
>PRK09449 dUMP phosphatase; Provisional
Probab=89.46 E-value=0.65 Score=36.89 Aligned_cols=43 Identities=19% Similarity=0.190 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhhhCCCC-CCeEEEEeCCc-ccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKV-PANTLVCGDSG-NDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~-~~~~ia~GDs~-NDl~Ml~~a~~~~vam~ 115 (181)
+-.....+++++ |+. +++++.|||+. +|+..-+.+|+.++.+.
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~ 196 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGIDTCWLN 196 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCcEEEEC
Confidence 356788899999 875 47899999998 79999999996566664
No 158
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.31 E-value=0.61 Score=37.88 Aligned_cols=45 Identities=11% Similarity=0.039 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCC-cccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDS-GNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs-~NDl~Ml~~a~~~~vam~Na 117 (181)
+.......++++ |+++++++.|||+ ..|+..-+.+|..++.+...
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~ 210 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGMQACWINPE 210 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCC
Confidence 466788888899 9999999999999 59999999999666666543
No 159
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=88.44 E-value=0.73 Score=36.27 Aligned_cols=45 Identities=16% Similarity=0.153 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSN 116 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~N 116 (181)
+....+..++++. +++++++++|||+. +|+..-+.+|+.++.+..
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~ 199 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNP 199 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCcEEEECC
Confidence 3456677777763 78899999999998 899999999965666543
No 160
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=88.39 E-value=0.71 Score=34.02 Aligned_cols=35 Identities=20% Similarity=0.222 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHHhhhCC--CCCCeEEEEeCCcccHHHHh
Q 048221 68 AGKGQALAYVLKKFKIDG--KVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 68 ~~Kg~al~~L~~~~~~~~--i~~~~~ia~GDs~NDl~Ml~ 105 (181)
..|...+..+++++ | ++++++++|||+..|++=++
T Consensus 89 ~pkp~~~~~a~~~l---g~~~~p~~~l~igDs~~n~~~~~ 125 (128)
T TIGR01681 89 LPKSPRLVEIALKL---NGVLKPKSILFVDDRPDNNEEVD 125 (128)
T ss_pred CcHHHHHHHHHHHh---cCCCCcceEEEECCCHhHHHHHH
Confidence 36899999999999 9 99999999999999976544
No 161
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=88.10 E-value=0.91 Score=37.53 Aligned_cols=45 Identities=18% Similarity=0.220 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na 117 (181)
+-..++.+++++ ++++++++.|||+. .|+.+-+.+|+.++.+..+
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G 226 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTG 226 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence 345778888888 99999999999996 9999999999888888655
No 162
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=88.08 E-value=0.58 Score=35.61 Aligned_cols=33 Identities=15% Similarity=0.069 Sum_probs=27.9
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhC
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSV 106 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~ 106 (181)
-...+..++++ |+++++++.|||+..|+..-+.
T Consensus 142 p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 142 PVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred HHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 45667888888 9999999999999999887553
No 163
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=86.07 E-value=7.5 Score=37.35 Aligned_cols=51 Identities=27% Similarity=0.465 Sum_probs=45.0
Q ss_pred EEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCC
Q 048221 54 IFSSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVP 107 (181)
Q Consensus 54 ~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a 107 (181)
+..+...+|+-|.+++||.+...+.... .-+++.++++||..-|-.|+...
T Consensus 642 v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~~df~~c~g~d~tDed~~~~~ 692 (732)
T KOG1050|consen 642 VVRGKHIVEVRPQGVSKGLAAERILSEM---VKEPDFVLCIGDDRTDEDMFEFI 692 (732)
T ss_pred EEecCceEEEcccccchHHHHHHHHHhc---CCCcceEEEecCCCChHHHHHHH
Confidence 3567899999999999999999999998 64568899999999999999864
No 164
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=85.78 E-value=2.9 Score=41.67 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
+.......++++ +++++++++|||+.+|+..-+.+|...+.+...
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~ 264 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGMRCIAVTTT 264 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence 357788899999 999999999999999999999999777777754
No 165
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=83.98 E-value=1.7 Score=35.43 Aligned_cols=43 Identities=14% Similarity=0.089 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHhhhCCCCCCeE-EEEeCCc-ccHHHHhCCCceEEEec
Q 048221 70 KGQALAYVLKKFKIDGKVPANT-LVCGDSG-NDAELFSVPDIYGVMVS 115 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~-ia~GDs~-NDl~Ml~~a~~~~vam~ 115 (181)
+....+.+++++ +++++++ +.|||+. .|+..-+.+|+.++.+.
T Consensus 190 ~~~~~~~~~~~~---~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~ 234 (236)
T TIGR01460 190 SPAIYRAALNLL---QARPERRDVMVGDNLRTDILGAKNAGFDTLLVL 234 (236)
T ss_pred CHHHHHHHHHHh---CCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence 356778888888 8888887 9999998 89999999996555553
No 166
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=82.73 E-value=6.4 Score=31.27 Aligned_cols=97 Identities=16% Similarity=0.127 Sum_probs=63.7
Q ss_pred CCceEEEEEecch----------hHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEE-eeCCCCHHHHHHHHHHHhhhCCCC
Q 048221 19 QRPHKISFFVEKF----------KAFAIMKALSERLEERGLDVKLIFSSGMALDV-LPKGAGKGQALAYVLKKFKIDGKV 87 (181)
Q Consensus 19 ~~v~Ki~~~~~~~----------~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI-~~~~~~Kg~al~~L~~~~~~~~i~ 87 (181)
+.-+++.++...+ .....-..+...|+..|..+.-+...+..=+- ..-.==|.-.+...++++ +++
T Consensus 45 ~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~---~iD 121 (181)
T COG0241 45 RAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEY---NID 121 (181)
T ss_pred hCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHh---CCC
Confidence 4566777665422 34444556777888887666544443322110 111112556778888888 899
Q ss_pred CCeEEEEeCCcccHHHHhCCCceEEEecCCh
Q 048221 88 PANTLVCGDSGNDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 88 ~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~ 118 (181)
+++.+++||...|+..-..+|+.++.+.+..
T Consensus 122 ~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~ 152 (181)
T COG0241 122 LSRSYVVGDRLTDLQAAENAGIKGVLVLTGI 152 (181)
T ss_pred ccceEEecCcHHHHHHHHHCCCCceEEEcCc
Confidence 9999999999999999999886666665543
No 167
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=82.15 E-value=1.5 Score=35.41 Aligned_cols=40 Identities=18% Similarity=0.188 Sum_probs=33.5
Q ss_pred HHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 75 AYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 75 ~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
..-++++ |+++++|++|.||.|.+..-+.+|...|.+.+.
T Consensus 149 L~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~ 188 (221)
T COG0637 149 LLAAERL---GVDPEECVVVEDSPAGIQAAKAAGMRVVGVPAG 188 (221)
T ss_pred HHHHHHc---CCChHHeEEEecchhHHHHHHHCCCEEEEecCC
Confidence 4445566 999999999999999999999999777777763
No 168
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=81.78 E-value=2 Score=35.55 Aligned_cols=49 Identities=24% Similarity=0.281 Sum_probs=42.2
Q ss_pred HHHHHHHHhhhCCCCCCeEEEEeCC-cccHHHHhCCCceEEEecCChHHHHHH
Q 048221 73 ALAYVLKKFKIDGKVPANTLVCGDS-GNDAELFSVPDIYGVMVSNSQEELLQW 124 (181)
Q Consensus 73 al~~L~~~~~~~~i~~~~~ia~GDs-~NDl~Ml~~a~~~~vam~Na~~~lk~~ 124 (181)
--+..++++ ++.|++|+.+||+ .||++=-+.+|.+++.+.|+...++..
T Consensus 173 If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~~ 222 (237)
T KOG3085|consen 173 IFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKEL 222 (237)
T ss_pred HHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhhh
Confidence 345677788 9999999999995 699999999999999999998877765
No 169
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=80.62 E-value=2 Score=42.23 Aligned_cols=52 Identities=23% Similarity=0.432 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAK 130 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~ 130 (181)
.|.+=+..+ +++ | ..+-.+|||-||-..|++|+ .|+..+.|...+. |.+.++
T Consensus 840 qK~~Lie~l-Qkl---~---y~VgfCGDGANDCgALKaAd-vGISLSeaEASvA--ApFTSk 891 (1140)
T KOG0208|consen 840 QKAELIEAL-QKL---G---YKVGFCGDGANDCGALKAAD-VGISLSEAEASVA--APFTSK 891 (1140)
T ss_pred hHHHHHHHH-Hhc---C---cEEEecCCCcchhhhhhhcc-cCcchhhhhHhhc--CccccC
Confidence 455555444 444 3 36888999999999999999 8999987765543 454443
No 170
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=79.78 E-value=3.4 Score=33.51 Aligned_cols=40 Identities=23% Similarity=0.185 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhCCCC-CCeEEEEeCC-cccHHHHhCCCceEEEe
Q 048221 72 QALAYVLKKFKIDGKV-PANTLVCGDS-GNDAELFSVPDIYGVMV 114 (181)
Q Consensus 72 ~al~~L~~~~~~~~i~-~~~~ia~GDs-~NDl~Ml~~a~~~~vam 114 (181)
..++..++++ +.. .++++++||+ .+|+.+-+.+|+.++.+
T Consensus 199 ~~~~~~~~~~---~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v 240 (242)
T TIGR01459 199 AIFHKALKEC---SNIPKNRMLMVGDSFYTDILGANRLGIDTALV 240 (242)
T ss_pred HHHHHHHHHc---CCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence 4456667777 654 5789999999 69999999999555443
No 171
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=79.00 E-value=16 Score=32.52 Aligned_cols=49 Identities=27% Similarity=0.302 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHh---hhCCCCCCeEEEEeC-----CcccHHHHhCCCceEEEecCChHH
Q 048221 68 AGKGQALAYVLKKF---KIDGKVPANTLVCGD-----SGNDAELFSVPDIYGVMVSNSQEE 120 (181)
Q Consensus 68 ~~Kg~al~~L~~~~---~~~~i~~~~~ia~GD-----s~NDl~Ml~~a~~~~vam~Na~~~ 120 (181)
.+|.-|++.+++.+ . ++.+++++.+|| |.||...-. ++ ..+.++|..+-
T Consensus 348 GdKs~GV~~lQ~y~~~~~--~i~~~~tLHVGDQF~s~GaNDfkaR~-a~-~t~WIasP~ET 404 (408)
T PF06437_consen 348 GDKSLGVRALQKYFDPEG--GIKPSETLHVGDQFLSAGANDFKARL-AC-TTAWIASPQET 404 (408)
T ss_pred CCcHHhHHHHHHHHHhcc--CCCccceeeehhhhhccCCcchhhhh-hc-eeeEecCHHHH
Confidence 48999999998888 3 799999999999 459998765 56 57777776543
No 172
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=78.53 E-value=2.7 Score=34.69 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=23.4
Q ss_pred EEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 91 TLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 91 ~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
++.+||+.+|+...+.+|+.++.+..+
T Consensus 187 ~I~IGDs~~Di~aA~~AGi~~I~v~~G 213 (237)
T PRK11009 187 RIFYGDSDNDITAAREAGARGIRILRA 213 (237)
T ss_pred eEEEcCCHHHHHHHHHcCCcEEEEecC
Confidence 899999999999999999777776654
No 173
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=78.21 E-value=4.1 Score=32.05 Aligned_cols=44 Identities=27% Similarity=0.364 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHHHhCCCceEEEecCCh
Q 048221 72 QALAYVLKKFKIDGKVPANTLVCGDSG-NDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 72 ~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na~ 118 (181)
..-+..++++ |+++++++.|||+. ||+.--+.+|..++.+....
T Consensus 158 ~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~ 202 (229)
T COG1011 158 EIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMKTVWINRGG 202 (229)
T ss_pred HHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcEEEEECCCC
Confidence 5677888888 99999999999965 66588888896676666443
No 174
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=77.57 E-value=9 Score=35.39 Aligned_cols=84 Identities=11% Similarity=0.097 Sum_probs=50.6
Q ss_pred CCCceEEEEEecchh-------HHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhhhCC----C
Q 048221 18 EQRPHKISFFVEKFK-------AFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFKIDG----K 86 (181)
Q Consensus 18 ~~~v~Ki~~~~~~~~-------~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~~~~----i 86 (181)
...-+++.++..... .+.+...+...+...|+.+.++.+.... ... --+--.+.++++++ + +
T Consensus 210 ~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~~~--~~R--KP~pGm~~~a~~~~---~~~~~I 282 (526)
T TIGR01663 210 EADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIGAG--FYR--KPLTGMWDHLKEEA---NDGTEI 282 (526)
T ss_pred HHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCCCC--CCC--CCCHHHHHHHHHhc---CcccCC
Confidence 345678877765433 2233344555666666665544432210 111 12345677888877 5 8
Q ss_pred CCCeEEEEeCCcccHHHHhCCC
Q 048221 87 VPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 87 ~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
++++++++||+..|+..-+.+|
T Consensus 283 d~~~S~~VGDaagr~~~g~~ag 304 (526)
T TIGR01663 283 QEDDCFFVGDAAGRPANGKAAG 304 (526)
T ss_pred CHHHeEEeCCcccchHHHHhcC
Confidence 8999999999999987654444
No 175
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=76.48 E-value=3.2 Score=34.20 Aligned_cols=25 Identities=24% Similarity=0.306 Sum_probs=21.7
Q ss_pred EEEEeCCcccHHHHhCCCceEEEec
Q 048221 91 TLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 91 ~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
++++||+.||+..-+.+|+.++.+.
T Consensus 187 ~i~vGDs~~DI~aAk~AGi~~I~V~ 211 (237)
T TIGR01672 187 RIHYGDSDNDITAAKEAGARGIRIL 211 (237)
T ss_pred eEEEeCCHHHHHHHHHCCCCEEEEE
Confidence 7999999999999999997666664
No 176
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=74.50 E-value=2.5 Score=40.15 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCC
Q 048221 69 GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKD 131 (181)
Q Consensus 69 ~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~ 131 (181)
.|-.-++.|.++- ..+-.-||+-||.|-|+.|+ .|+++.+|.+.....++.+...
T Consensus 572 hKy~iV~~Lq~r~-------hi~gmtgdgvndapaLKkAd-igiava~atdaar~asdiVlte 626 (942)
T KOG0205|consen 572 HKYEIVKILQERK-------HIVGMTGDGVNDAPALKKAD-IGIAVADATDAARSASDIVLTE 626 (942)
T ss_pred HHHHHHHHHhhcC-------ceecccCCCcccchhhcccc-cceeeccchhhhcccccEEEcC
Confidence 4666666665553 24777899999999999999 8999999999999887776543
No 177
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=73.35 E-value=13 Score=30.09 Aligned_cols=44 Identities=16% Similarity=0.035 Sum_probs=30.7
Q ss_pred EEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 62 DVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 62 eI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
+|+..+..-...++..++++ ++++.+++++||+..|++-+...+
T Consensus 72 ~Ii~s~~~~~~~l~~~~~~~---~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 72 MIISSGEIAVQMILESKKRF---DIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred eEEccHHHHHHHHHhhhhhc---cCCCceEEEeCCcccchhhhcCCC
Confidence 34444322334566666666 788899999999999998886555
No 178
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=71.81 E-value=5.3 Score=33.16 Aligned_cols=40 Identities=23% Similarity=0.477 Sum_probs=34.9
Q ss_pred EeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 63 VLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 63 I~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
++..+.+||.++..++++. |..++.++++-|+...+.=++
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~ 195 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVE 195 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHH
Confidence 4567899999999999999 999999999999988776544
No 179
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=71.13 E-value=1.8 Score=34.77 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=35.3
Q ss_pred eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEE
Q 048221 65 PKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVM 113 (181)
Q Consensus 65 ~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~va 113 (181)
+-|++|+..+..+.+.+ +.++.+|||.-|++.-+.++ +-+|
T Consensus 143 ~fG~dK~~vI~~l~e~~-------e~~fy~GDsvsDlsaaklsD-llFA 183 (220)
T COG4359 143 QFGHDKSSVIHELSEPN-------ESIFYCGDSVSDLSAAKLSD-LLFA 183 (220)
T ss_pred ccCCCcchhHHHhhcCC-------ceEEEecCCcccccHhhhhh-hHhh
Confidence 45789999999997765 56999999999999999999 6776
No 180
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=67.40 E-value=29 Score=24.72 Aligned_cols=43 Identities=26% Similarity=0.437 Sum_probs=29.0
Q ss_pred EcCcEEEEeeCCC--CHHHHHHHHHHHhhhCCCCCCeEEEEeCCc-ccHHH
Q 048221 56 SSGMALDVLPKGA--GKGQALAYVLKKFKIDGKVPANTLVCGDSG-NDAEL 103 (181)
Q Consensus 56 s~~~~leI~~~~~--~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~-NDl~M 103 (181)
.+..+-.+...+. -|...++.+++.+ +..+.+.+|||. -|.+.
T Consensus 35 ~~~~~~~~~~~~~~~~K~~~i~~i~~~f-----P~~kfiLIGDsgq~Dpei 80 (100)
T PF09949_consen 35 YGPSLSGLFKSGAEEHKRDNIERILRDF-----PERKFILIGDSGQHDPEI 80 (100)
T ss_pred CCccccccccCCchhHHHHHHHHHHHHC-----CCCcEEEEeeCCCcCHHH
Confidence 3344444443333 7999999999877 567899999964 45443
No 181
>PTZ00445 p36-lilke protein; Provisional
Probab=67.25 E-value=8.9 Score=31.39 Aligned_cols=52 Identities=19% Similarity=0.190 Sum_probs=44.6
Q ss_pred eeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCCh
Q 048221 64 LPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQ 118 (181)
Q Consensus 64 ~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~ 118 (181)
-|....|..=++.+++++ |+.++++++|=|+...++--+..|+.++.+.++.
T Consensus 157 KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~~e 208 (219)
T PTZ00445 157 APMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGYIALHVTGNE 208 (219)
T ss_pred CCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCCEEEEcCChH
Confidence 345556667789999999 9999999999999999999999998888887653
No 182
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=64.79 E-value=49 Score=25.16 Aligned_cols=45 Identities=18% Similarity=0.058 Sum_probs=31.8
Q ss_pred EEeeCCC--CHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCC
Q 048221 62 DVLPKGA--GKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 62 eI~~~~~--~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
|++.... =|...++.|.+.+. .-...-+++|||..+|.++-+.+|
T Consensus 93 e~i~~~~~~~K~~~l~~i~~~~~--~~~~~f~~~~gn~~~D~~~y~~~g 139 (157)
T smart00775 93 EVISKKPEVFKIACLRDIKSLFP--PQGNPFYAGFGNRITDVISYSAVG 139 (157)
T ss_pred ccccCCHHHHHHHHHHHHHHhcC--CCCCCEEEEeCCCchhHHHHHHcC
Confidence 3444443 48889999988762 112334667999999999999988
No 183
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=64.65 E-value=21 Score=29.98 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHH
Q 048221 66 KGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAEL 103 (181)
Q Consensus 66 ~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~M 103 (181)
...+|....+.+.+.+ +| ++.|||..+|+.=
T Consensus 173 ~~~~K~~rr~~I~~~y---~I----vl~vGD~~~Df~~ 203 (266)
T TIGR01533 173 DKSSKESRRQKVQKDY---EI----VLLFGDNLLDFDD 203 (266)
T ss_pred CCCCcHHHHHHHHhcC---CE----EEEECCCHHHhhh
Confidence 3457888888888888 66 9999999999853
No 184
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=63.58 E-value=6.8 Score=30.90 Aligned_cols=81 Identities=19% Similarity=0.208 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEEcC-----cE-----EE-EeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCc-
Q 048221 31 FKAFAIMKALSERLEERGLDVKLIFSSG-----MA-----LD-VLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSG- 98 (181)
Q Consensus 31 ~~~~~~~~~i~~~~~~~g~~~~~~~s~~-----~~-----le-I~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~- 98 (181)
+..+++.+.+ ..+++.|+.+-++.-+. ++ ++ |..+.-==+.|+++-++++ ++++++|+.+||..
T Consensus 46 ~~tpe~~~W~-~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m---~l~~~~vvmVGDqL~ 121 (175)
T COG2179 46 DATPELRAWL-AELKEAGIKVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEM---NLPPEEVVMVGDQLF 121 (175)
T ss_pred CCCHHHHHHH-HHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHc---CCChhHEEEEcchhh
Confidence 3445554444 34666676665443221 11 11 3343333478899999999 99999999999963
Q ss_pred ccHHHHhCCCceEEEec
Q 048221 99 NDAELFSVPDIYGVMVS 115 (181)
Q Consensus 99 NDl~Ml~~a~~~~vam~ 115 (181)
-|+--=..+|.+++.|.
T Consensus 122 TDVlggnr~G~~tIlV~ 138 (175)
T COG2179 122 TDVLGGNRAGMRTILVE 138 (175)
T ss_pred hhhhcccccCcEEEEEE
Confidence 45444445666666665
No 185
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=61.93 E-value=15 Score=30.83 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=48.0
Q ss_pred eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHH
Q 048221 65 PKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQW 124 (181)
Q Consensus 65 ~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~ 124 (181)
+..++|-+.-++|.+++ |-+....+++||+.---+.-+..+ .+|.-=+..|++.+.
T Consensus 210 a~kvGK~~cFe~I~~Rf---g~p~~~f~~IGDG~eEe~aAk~l~-wPFw~I~~h~Dl~~l 265 (274)
T TIGR01658 210 SIKVGKLQCFKWIKERF---GHPKVRFCAIGDGWEECTAAQAMN-WPFVKIDLHPDSSHR 265 (274)
T ss_pred hhhcchHHHHHHHHHHh---CCCCceEEEeCCChhHHHHHHhcC-CCeEEeecCCCHHHh
Confidence 45689999999999999 887889999999998888888888 888887777777654
No 186
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=61.00 E-value=3.8 Score=34.91 Aligned_cols=102 Identities=20% Similarity=0.260 Sum_probs=65.4
Q ss_pred eeeeccccccccccCCCceEEEEEec----chhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHH
Q 048221 4 ILLFDSYGTLQSETEQRPHKISFFVE----KFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLK 79 (181)
Q Consensus 4 ~~~~~~~~~~~~~~~~~v~Ki~~~~~----~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~ 79 (181)
+..+++..++..-.-+..-|+.+... .+...++.+.++.+++. + ..+.+=+|.....+...|++.|..
T Consensus 140 ~~lve~~~d~~~l~~~~~~~l~~~tQTTls~ddt~~Iv~~l~~r~p~----~----~~~~~~~ICyAT~nRQ~Avk~la~ 211 (294)
T COG0761 140 VLLVESVEDVANLKVQLPDKLAFVTQTTLSVDDTAEIVAALKERFPK----I----EVPPFNDICYATQNRQDAVKELAP 211 (294)
T ss_pred eEEEecHHHHHhcccCCcccEEEEeeeecCHHHHHHHHHHHHHhCcc----c----cCCcccccchhhhhHHHHHHHHhh
Confidence 45677777766443223337777652 23445555566655543 2 223444689999999999999988
Q ss_pred HhhhCCCCCCeEEEEeC--CcccHHHHhC---CCceEEEecCChHH
Q 048221 80 KFKIDGKVPANTLVCGD--SGNDAELFSV---PDIYGVMVSNSQEE 120 (181)
Q Consensus 80 ~~~~~~i~~~~~ia~GD--s~NDl~Ml~~---a~~~~vam~Na~~~ 120 (181)
.. +-++++|+ |.|=-.+++. .|..++.+.++.+-
T Consensus 212 ~~-------Dl~iVVG~~nSSNs~rL~eiA~~~g~~aylId~~~ei 250 (294)
T COG0761 212 EV-------DLVIVVGSKNSSNSNRLAEIAKRHGKPAYLIDDAEEI 250 (294)
T ss_pred cC-------CEEEEECCCCCccHHHHHHHHHHhCCCeEEeCChHhC
Confidence 87 45999998 7777666543 23258888877653
No 187
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.04 E-value=8.3 Score=25.56 Aligned_cols=27 Identities=30% Similarity=0.481 Sum_probs=23.5
Q ss_pred HHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHhC
Q 048221 73 ALAYVLKKFKIDGKVPANTLVCGDSGNDAELFSV 106 (181)
Q Consensus 73 al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~~ 106 (181)
-++.|++.+ |+ ++.|||-.-|++|++.
T Consensus 6 DVqQlLK~~---G~----ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKF---GI----IVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHC---Ce----eeecCCHHHHHHHHHH
Confidence 467888998 87 9999999999999874
No 188
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=55.02 E-value=14 Score=28.21 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=19.9
Q ss_pred CCCCCeEEEEeCCcccHHHHhCCC
Q 048221 85 GKVPANTLVCGDSGNDAELFSVPD 108 (181)
Q Consensus 85 ~i~~~~~ia~GDs~NDl~Ml~~a~ 108 (181)
|.++++++.+||+..|..+-...+
T Consensus 109 ~~~~~~vIiVDD~~~~~~~~~~Ng 132 (162)
T TIGR02251 109 GKDLSKVIIIDNSPYSYSLQPDNA 132 (162)
T ss_pred CCChhhEEEEeCChhhhccCccCE
Confidence 888899999999999887766544
No 189
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=54.65 E-value=60 Score=26.28 Aligned_cols=68 Identities=18% Similarity=0.181 Sum_probs=51.4
Q ss_pred HHHHHHHHHhcCCcEEEEEEc---------------------CcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEe
Q 048221 37 MKALSERLEERGLDVKLIFSS---------------------GMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCG 95 (181)
Q Consensus 37 ~~~i~~~~~~~g~~~~~~~s~---------------------~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~G 95 (181)
.+.|+.+ ++.|+++.+..|| ..|+|.+...-.-.++-..+.... |+++.+++++-
T Consensus 109 v~~ik~w-k~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDttiG~KrE~~SY~kIa~~i---Gl~p~eilFLS 184 (229)
T COG4229 109 VQAIKRW-KALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTTIGKKRESQSYAKIAGDI---GLPPAEILFLS 184 (229)
T ss_pred HHHHHHH-HHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeeccccccccchhHHHHHHhc---CCCchheEEec
Confidence 3455543 3456777777776 367788776666677788888888 99999999999
Q ss_pred CCcccHHHHhCCC
Q 048221 96 DSGNDAELFSVPD 108 (181)
Q Consensus 96 Ds~NDl~Ml~~a~ 108 (181)
|..+-+..-+.+|
T Consensus 185 Dn~~EL~AA~~vG 197 (229)
T COG4229 185 DNPEELKAAAGVG 197 (229)
T ss_pred CCHHHHHHHHhcc
Confidence 9999888877666
No 190
>PRK10463 hydrogenase nickel incorporation protein HypB; Provisional
Probab=52.50 E-value=1.2e+02 Score=25.95 Aligned_cols=69 Identities=20% Similarity=0.322 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcCCcEEEEEEcCcEEEEe-eCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeC--CcccHHHHhCCCceEE
Q 048221 36 IMKALSERLEERGLDVKLIFSSGMALDVL-PKGAGKGQALAYVLKKFKIDGKVPANTLVCGD--SGNDAELFSVPDIYGV 112 (181)
Q Consensus 36 ~~~~i~~~~~~~g~~~~~~~s~~~~leI~-~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GD--s~NDl~Ml~~a~~~~v 112 (181)
..+..++.|.+.| ...+-|+ +.|++|-+=++.++..+ .-...-.+..|| +.||...++..|+-++
T Consensus 91 ~a~~~r~~~~~~~---------~~~v~l~G~pGsGKTTLl~~l~~~l---~~~~~~~VI~gD~~t~~Da~rI~~~g~pvv 158 (290)
T PRK10463 91 LAERNRARFAARK---------QLVLNLVSSPGSGKTTLLTETLMRL---KDSVPCAVIEGDQQTVNDAARIRATGTPAI 158 (290)
T ss_pred HHHHHHHHHHhcC---------CeEEEEECCCCCCHHHHHHHHHHHh---ccCCCEEEECCCcCcHHHHHHHHhcCCcEE
Confidence 3455666665543 3334455 68999999999999987 333333444566 6689999998884444
Q ss_pred EecC
Q 048221 113 MVSN 116 (181)
Q Consensus 113 am~N 116 (181)
.+.+
T Consensus 159 qi~t 162 (290)
T PRK10463 159 QVNT 162 (290)
T ss_pred EecC
Confidence 4444
No 191
>PF01282 Ribosomal_S24e: Ribosomal protein S24e; InterPro: IPR001976 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family contains the S24e ribosomal proteins from eukaryotes and archaebacteria. These proteins have 101 to 148 amino acids.; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2V94_B 1YWX_A 2G1D_A 3IZ6_U 1XN9_A 2XZM_P 2XZN_P 3U5G_Y 3J16_D 3IZB_U ....
Probab=51.79 E-value=40 Score=23.19 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=24.9
Q ss_pred EEEeeCC---CCHHHHHHHHHHHhhhCCCCCCeEEEEe
Q 048221 61 LDVLPKG---AGKGQALAYVLKKFKIDGKVPANTLVCG 95 (181)
Q Consensus 61 leI~~~~---~~Kg~al~~L~~~~~~~~i~~~~~ia~G 95 (181)
++|.+.| .+|......|++.+ +++++.++.+|
T Consensus 3 ~~v~h~g~~Tpsr~ei~~klA~~~---~~~~~~ivv~~ 37 (84)
T PF01282_consen 3 FEVLHPGKPTPSRKEIREKLAAML---NVDPDLIVVFG 37 (84)
T ss_dssp EEEE-SSSSS--HHHHHHHHHHHH---TSTGCCEEEEE
T ss_pred EEEECCCCCCCCHHHHHHHHHHHh---CCCCCeEEEec
Confidence 4555554 78999999999999 99999999988
No 192
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=50.78 E-value=17 Score=31.20 Aligned_cols=48 Identities=23% Similarity=0.258 Sum_probs=34.1
Q ss_pred HHHHHHHHHhhhCCCCCCeEEEEeCCcc-cHHHHhCCCceEEEecCChHHHH
Q 048221 72 QALAYVLKKFKIDGKVPANTLVCGDSGN-DAELFSVPDIYGVMVSNSQEELL 122 (181)
Q Consensus 72 ~al~~L~~~~~~~~i~~~~~ia~GDs~N-Dl~Ml~~a~~~~vam~Na~~~lk 122 (181)
.....|.+++ ++++++++.|||..| |+-.=+.+|.....|..+...+.
T Consensus 228 ~m~~~l~~~~---~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~le 276 (306)
T KOG2882|consen 228 FMFEYLLEKF---NIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLE 276 (306)
T ss_pred HHHHHHHHHc---CCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHH
Confidence 3456788888 999999999999987 55555556755666665544433
No 193
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=40.72 E-value=20 Score=28.89 Aligned_cols=27 Identities=22% Similarity=0.300 Sum_probs=22.2
Q ss_pred EEEEeCCcccHHHHhCCCceEEEecCC
Q 048221 91 TLVCGDSGNDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 91 ~ia~GDs~NDl~Ml~~a~~~~vam~Na 117 (181)
-+..|||.||+..-+.+|+.++-.--|
T Consensus 187 ~IhYGDSD~Di~AAkeaG~RgIRilRA 213 (237)
T COG3700 187 RIHYGDSDNDITAAKEAGARGIRILRA 213 (237)
T ss_pred eEEecCCchhhhHHHhcCccceeEEec
Confidence 688999999999999999777765443
No 194
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=40.08 E-value=32 Score=29.33 Aligned_cols=31 Identities=13% Similarity=0.061 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCc-ccHHHHhCCCceEEEecCC
Q 048221 87 VPANTLVCGDSG-NDAELFSVPDIYGVMVSNS 117 (181)
Q Consensus 87 ~~~~~ia~GDs~-NDl~Ml~~a~~~~vam~Na 117 (181)
++++++.|||+. .|+.+-+.+|..++.|..+
T Consensus 262 ~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG 293 (321)
T TIGR01456 262 PFHALYMVGDNPASDIIGAQNYGWFSCLVKTG 293 (321)
T ss_pred ChheEEEEcCChhhhhhhHHhCCceEEEeccc
Confidence 447999999997 9999999999888888765
No 195
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=39.73 E-value=17 Score=28.02 Aligned_cols=29 Identities=28% Similarity=0.348 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
=..|++++.++....+++.++++.+|||-
T Consensus 52 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 52 VKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp HHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred cccceeeeccccccccccccceEEeeccc
Confidence 35688888888211188999999999974
No 196
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=38.09 E-value=14 Score=24.28 Aligned_cols=25 Identities=40% Similarity=0.549 Sum_probs=16.4
Q ss_pred HHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 74 LAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 74 l~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
++.|++++ |+ ++.+||=.-|++|++
T Consensus 7 VqQLLK~f---G~----~IY~gdr~~DielM~ 31 (62)
T PF06014_consen 7 VQQLLKKF---GI----IIYVGDRLWDIELME 31 (62)
T ss_dssp HHHHHHTT---S---------S-HHHHHHHHH
T ss_pred HHHHHHHC---CE----EEEeCChHHHHHHHH
Confidence 67788888 76 999999999999986
No 197
>PRK01395 V-type ATP synthase subunit F; Provisional
Probab=32.47 E-value=1.3e+02 Score=21.49 Aligned_cols=63 Identities=25% Similarity=0.219 Sum_probs=35.8
Q ss_pred CeEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchhcCCCCccccccCCcchHHHHHHHHh
Q 048221 89 ANTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAENAKDNPKIIHATERCAARIMQAIGKF 153 (181)
Q Consensus 89 ~~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~ 153 (181)
.++.++|| ..-+.-|+.+|+-.+.+.+. +++++.-......+--+...+..-.+.+.+.++++
T Consensus 4 ~kIaVIGD-~dtv~GFrLaGi~~~~v~~~-ee~~~~i~~l~~~d~gII~Ite~~a~~i~~~i~~~ 66 (104)
T PRK01395 4 YKIGVVGD-KDSILPFKALGIDVFPVIDE-QEAINTLRKLAMEDYGIIYITEQIAADIPETIERY 66 (104)
T ss_pred eeEEEEEC-HHHHHHHHHcCCeeEEecCh-HHHHHHHHHHhcCCcEEEEEcHHHHHHhHHHHHHh
Confidence 36899999 88888899999655554444 44444333333222223333323344556666665
No 198
>PRK01178 rps24e 30S ribosomal protein S24e; Reviewed
Probab=32.18 E-value=1.5e+02 Score=21.13 Aligned_cols=33 Identities=9% Similarity=0.095 Sum_probs=27.2
Q ss_pred EEEEeeCC---CCHHHHHHHHHHHhhhCCCCCCeEEEEe
Q 048221 60 ALDVLPKG---AGKGQALAYVLKKFKIDGKVPANTLVCG 95 (181)
Q Consensus 60 ~leI~~~~---~~Kg~al~~L~~~~~~~~i~~~~~ia~G 95 (181)
.++|.+.+ .+|..--..|++.+ +.+++.++++|
T Consensus 20 ~~~v~h~g~~tpsr~eirekLa~~~---~~~~~~vvv~~ 55 (99)
T PRK01178 20 KFEVYHEGSATPSRKDVRKKLAAML---NADKELVVVRK 55 (99)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHHHH---CcCCCEEEEEc
Confidence 35565544 69999999999999 88889999988
No 199
>KOG4779 consensus Predicted membrane protein [Function unknown]
Probab=32.15 E-value=34 Score=23.12 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.7
Q ss_pred HHHHHhhhCCCCCCeEEEEeCCcccH
Q 048221 76 YVLKKFKIDGKVPANTLVCGDSGNDA 101 (181)
Q Consensus 76 ~L~~~~~~~~i~~~~~ia~GDs~NDl 101 (181)
+++++. |++.++.+.|||.+|-+
T Consensus 26 RFL~ri---Gws~d~~~gFG~~q~ti 48 (82)
T KOG4779|consen 26 RFLKRI---GWSTDQGIGFGEDQPTI 48 (82)
T ss_pred HHHHHh---CcCcccCcccCCCCccH
Confidence 455666 99999999999988765
No 200
>KOG3424 consensus 40S ribosomal protein S24 [Translation, ribosomal structure and biogenesis]
Probab=31.52 E-value=1.3e+02 Score=22.40 Aligned_cols=32 Identities=25% Similarity=0.384 Sum_probs=27.1
Q ss_pred EEEee---CCCCHHHHHHHHHHHhhhCCCCCCeEEEEe
Q 048221 61 LDVLP---KGAGKGQALAYVLKKFKIDGKVPANTLVCG 95 (181)
Q Consensus 61 leI~~---~~~~Kg~al~~L~~~~~~~~i~~~~~ia~G 95 (181)
+|+++ +.++|..-=+.|.+.| ..+++.+++||
T Consensus 25 vdvlHPG~a~vsK~EirEKla~mY---kt~~d~V~vfg 59 (132)
T KOG3424|consen 25 VDVLHPGKANVSKTEIREKLAKMY---KTTPDAVFVFG 59 (132)
T ss_pred EEEecCCCCCCCHHHHHHHHHHHh---cCCcceEEEEE
Confidence 45554 3589999999999999 88999999998
No 201
>PF13689 DUF4154: Domain of unknown function (DUF4154)
Probab=30.96 E-value=1.1e+02 Score=22.79 Aligned_cols=78 Identities=18% Similarity=0.165 Sum_probs=47.1
Q ss_pred CCCceEEEEEecchhHHHHHHHHHHH-HHhcCCcEEEEEEc----CcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCCeEE
Q 048221 18 EQRPHKISFFVEKFKAFAIMKALSER-LEERGLDVKLIFSS----GMALDVLPKGAGKGQALAYVLKKFKIDGKVPANTL 92 (181)
Q Consensus 18 ~~~v~Ki~~~~~~~~~~~~~~~i~~~-~~~~g~~~~~~~s~----~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~~~i 92 (181)
..+.+.+.++.++...+. +..+..+ ..+ -.+.+..-. ....+++--+-+....++.+.+.+ ....++
T Consensus 24 ~~~~~~icv~g~~~~~~~-L~~l~~~~~~~--~~i~v~~~~~~~~~~~C~ilyi~~~~~~~~~~i~~~~-----~~~~vL 95 (145)
T PF13689_consen 24 PSSPFRICVLGDDPFAEA-LSTLAGKQVGG--RPIRVRRLSSPNEISGCHILYISSSESSQLPEILRKL-----PGKPVL 95 (145)
T ss_pred CCCCeEEEEECChHHHHH-HHHhhhcccCC--CcEEEEECCCCcccccccEEEECCCChHHHHHHHHhc-----CCCceE
Confidence 467888998887654433 3344322 222 245444321 244566666667777787787766 345699
Q ss_pred EEeCCcccHHH
Q 048221 93 VCGDSGNDAEL 103 (181)
Q Consensus 93 a~GDs~NDl~M 103 (181)
.|||+.+..+.
T Consensus 96 tIsd~~~f~~~ 106 (145)
T PF13689_consen 96 TISDGEGFAEQ 106 (145)
T ss_pred EEECCCCcccc
Confidence 99999885443
No 202
>PF10113 Fibrillarin_2: Fibrillarin-like archaeal protein; InterPro: IPR016760 Members of this protein family are HmdC, whose gene regularly occurs in the context of genes for HmdA (5,10-methenyltetrahydromethanopterin hydrogenase) and the radical SAM protein HmdB involved in biosynthesis of the HmdA cofactor. Bioinformatics suggests this protein, a homologue of eukaryotic fibrillarin, may be involved in biosynthesis of the guanylyl pyridinol cofactor in HmdA.
Probab=30.10 E-value=99 Score=28.08 Aligned_cols=85 Identities=14% Similarity=0.170 Sum_probs=52.1
Q ss_pred EEeeCCCCHHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHH-----HHhCCCceEEEecC-----ChHHHHHHhchhcCC
Q 048221 62 DVLPKGAGKGQALAYVLKKFKIDGKVPANTLVCGDSGNDAE-----LFSVPDIYGVMVSN-----SQEELLQWHAENAKD 131 (181)
Q Consensus 62 eI~~~~~~Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~-----Ml~~a~~~~vam~N-----a~~~lk~~A~~v~~~ 131 (181)
|-.....+-..-+..+.+++ |-..+-++++||++-|+- .++. ++--+++.- |.+.++..|..+.-+
T Consensus 199 e~HaApldE~~~Va~~Akk~---gkGveaI~~vGDGyddLI~G~~a~id~-~vDvfVvEGgPFN~a~dRl~aFakaVa~s 274 (505)
T PF10113_consen 199 EEHAAPLDEMEEVAELAKKY---GKGVEAIMHVGDGYDDLITGLKACIDM-GVDVFVVEGGPFNRAKDRLKAFAKAVAAS 274 (505)
T ss_pred cccCCCHHHHHHHHHHHHHh---CCCceEEEEecCChHHHHHHHHHHHhc-CCcEEEEeCCCcccchhHHHHHHHHHHHh
Confidence 44555567778888999999 888899999999999972 2222 223444443 355666666555422
Q ss_pred ----CCccccccCCcchHHHHHH
Q 048221 132 ----NPKIIHATERCAARIMQAI 150 (181)
Q Consensus 132 ----~~~~~~~~~~~~~Gv~~~l 150 (181)
+.++.-|.+.++|-..-.|
T Consensus 275 RIL~pGkVVaTNGAYEDEcRiGL 297 (505)
T PF10113_consen 275 RILVPGKVVATNGAYEDECRIGL 297 (505)
T ss_pred eeeecCcEEecCCcchHHHHHHH
Confidence 2333444445555444443
No 203
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=28.13 E-value=1.3e+02 Score=24.99 Aligned_cols=41 Identities=24% Similarity=0.265 Sum_probs=34.4
Q ss_pred HHHHHHHHHhhhCCCC-CCeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 72 QALAYVLKKFKIDGKV-PANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 72 ~al~~L~~~~~~~~i~-~~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
.|.+..++.. |++ +.++++|-||.+-+.--+..|...+.++
T Consensus 164 ~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~ 205 (244)
T KOG3109|consen 164 EAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLKTVLVG 205 (244)
T ss_pred HHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccceeEEEE
Confidence 4667777777 998 9999999999999999999996666665
No 204
>PF09883 DUF2110: Uncharacterized protein conserved in archaea (DUF2110); InterPro: IPR016757 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=26.86 E-value=2.8e+02 Score=22.85 Aligned_cols=61 Identities=10% Similarity=0.110 Sum_probs=47.2
Q ss_pred eEEEEEec-chhHHHHHHHHHHHHHhcCCcEEEEEEcCcEEEEeeCCCCHHHHHHHHHHHhh
Q 048221 22 HKISFFVE-KFKAFAIMKALSERLEERGLDVKLIFSSGMALDVLPKGAGKGQALAYVLKKFK 82 (181)
Q Consensus 22 ~Ki~~~~~-~~~~~~~~~~i~~~~~~~g~~~~~~~s~~~~leI~~~~~~Kg~al~~L~~~~~ 82 (181)
.|..++.+ ...++.+...+.+.+.+....+.+...-..|..+.-.|-+-..|...|.+.+.
T Consensus 3 ~~~~iyGd~~r~ld~L~~~v~n~lgdLdV~~~i~~~~~~wv~vtl~GeD~eva~Nll~eefG 64 (225)
T PF09883_consen 3 TKEKIYGDAERALDSLRSLVENDLGDLDVEWDIGITKDDWVKVTLEGEDEEVAANLLREEFG 64 (225)
T ss_pred eEEEEeccHHHHHHHHHHHHHHhhcCeeEEEEeccccCCceEEEEecCcHHHHHHHHHHHhC
Confidence 45666766 55677777788888877554555555567999999999999999999999994
No 205
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=25.77 E-value=73 Score=26.46 Aligned_cols=28 Identities=25% Similarity=0.228 Sum_probs=21.3
Q ss_pred HHHHHHHHHHhhhCCCCCCeEEEEeCCc
Q 048221 71 GQALAYVLKKFKIDGKVPANTLVCGDSG 98 (181)
Q Consensus 71 g~al~~L~~~~~~~~i~~~~~ia~GDs~ 98 (181)
..|++++.++-.+-|++++++++.|||-
T Consensus 134 ~~a~~~l~~~~~~~g~dp~~i~v~GdSA 161 (312)
T COG0657 134 YAAYRWLRANAAELGIDPSRIAVAGDSA 161 (312)
T ss_pred HHHHHHHHhhhHhhCCCccceEEEecCc
Confidence 5678888877321289999999999974
No 206
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=24.90 E-value=38 Score=27.97 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=24.0
Q ss_pred CCCCCeEEEEeCCccc-HHHHhCCCceEEEecCC
Q 048221 85 GKVPANTLVCGDSGND-AELFSVPDIYGVMVSNS 117 (181)
Q Consensus 85 ~i~~~~~ia~GDs~ND-l~Ml~~a~~~~vam~Na 117 (181)
|+++++++.|||.-|| +-=-+.+|-.++.|.-+
T Consensus 195 gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTG 228 (262)
T KOG3040|consen 195 GVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTG 228 (262)
T ss_pred CCChHHheEEccccccchhhHhhhcceeEEeecc
Confidence 8899999999999886 33344455567777654
No 207
>PF06616 BsuBI_PstI_RE: BsuBI/PstI restriction endonuclease C-terminus; InterPro: IPR009528 There are four classes of restriction endonucleases: types I, II,III and IV. All types of enzymes recognise specific short DNA sequences and carry out the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. They differ in their recognition sequence, subunit composition, cleavage position, and cofactor requirements [, ], as summarised below: Type I enzymes (3.1.21.3 from EC) cleave at sites remote from recognition site; require both ATP and S-adenosyl-L-methionine to function; multifunctional protein with both restriction and methylase (2.1.1.72 from EC) activities. Type II enzymes (3.1.21.4 from EC) cleave within or at short specific distances from recognition site; most require magnesium; single function (restriction) enzymes independent of methylase. Type III enzymes (3.1.21.5 from EC) cleave at sites a short distance from recognition site; require ATP (but doesn't hydrolyse it); S-adenosyl-L-methionine stimulates reaction but is not required; exists as part of a complex with a modification methylase methylase (2.1.1.72 from EC). Type IV enzymes target methylated DNA. Type II restriction endonucleases (3.1.21.4 from EC) are components of prokaryotic DNA restriction-modification mechanisms that protect the organism against invading foreign DNA. These site-specific deoxyribonucleases catalyse the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates. Of the 3000 restriction endonucleases that have been characterised, most are homodimeric or tetrameric enzymes that cleave target DNA at sequence-specific sites close to the recognition site. For homodimeric enzymes, the recognition site is usually a palindromic sequence 4-8 bp in length. Most enzymes require magnesium ions as a cofactor for catalysis. Although they can vary in their mode of recognition, many restriction endonucleases share a similar structural core comprising four beta-strands and one alpha-helix, as well as a similar mechanism of cleavage, suggesting a common ancestral origin []. However, there is still considerable diversity amongst restriction endonucleases [, ]. The target site recognition process triggers large conformational changes of the enzyme and the target DNA, leading to the activation of the catalytic centres. Like other DNA binding proteins, restriction enzymes are capable of non-specific DNA binding as well, which is the prerequisite for efficient target site location by facilitated diffusion. Non-specific binding usually does not involve interactions with the bases but only with the DNA backbone []. This entry represents the C terminus of bacterial enzymes similar to type II restriction endonucleases BsuBI and PstI (3.1.21.4 from EC). The enzymes of the BsuBI restriction/modification (R/M) system recognise the target sequence 5'CTGCAG and are functionally identical with those of the PstI R/M system [].; GO: 0000287 magnesium ion binding, 0003677 DNA binding, 0009036 Type II site-specific deoxyribonuclease activity, 0009307 DNA restriction-modification system; PDB: 2IXS_B.
Probab=24.88 E-value=4.4e+02 Score=22.73 Aligned_cols=59 Identities=17% Similarity=0.299 Sum_probs=41.1
Q ss_pred cEEEEEEcCcEEEEeeCCCCHH--HHHHHHHHHhhhCCCCCCeEEEEeCCcc-----cHHHHhCCCceEEE
Q 048221 50 DVKLIFSSGMALDVLPKGAGKG--QALAYVLKKFKIDGKVPANTLVCGDSGN-----DAELFSVPDIYGVM 113 (181)
Q Consensus 50 ~~~~~~s~~~~leI~~~~~~Kg--~al~~L~~~~~~~~i~~~~~ia~GDs~N-----Dl~Ml~~a~~~~va 113 (181)
.+.+...++..+.+-|.+.|.- .-|+.++-++ .+...++.+||+.| |.++|+..| ..+-
T Consensus 145 ~ipV~~p~G~~~~lspG~hn~L~kaIIEeFaprF----~pg~~vLyvgDtg~K~~~~d~~~l~~LG-i~i~ 210 (306)
T PF06616_consen 145 RIPVTLPNGEEITLSPGPHNELIKAIIEEFAPRF----APGPEVLYVGDTGDKVLYFDEELLKELG-ITID 210 (306)
T ss_dssp SEEEEEETTEEEEE-SSTTHHHHHHHHHTHHHHH----STT-EEEEEE-SSSS-EEE-HHHHHHC------
T ss_pred cceEEcCCCceEEECCCcchHHHHHHHHHHHHhh----CCCceEEEEcCCCCceeeccHHHHHHcC-CCcc
Confidence 5778888899999999988875 4578888888 56689999999864 889999877 4554
No 208
>PF00220 Hormone_4: Neurohypophysial hormones, N-terminal Domain; InterPro: IPR022423 Oxytocin (or ocytocin) and vasopressin [] are small (nine amino acid residues), structurally and functionally related neurohypophysial peptide hormones. Oxytocin causes contraction of the smooth muscle of the uterus and of the mammary gland while vasopressin has a direct antidiuretic action on the kidney and also causes vasoconstriction of the peripheral vessels. Like the majority of active peptides, both hormones are synthesized as larger protein precursors that are enzymatically converted to their mature forms. Peptides belonging to this family are also found in birds, fish, reptiles and amphibians (mesotocin, isotocin, valitocin, glumitocin, aspargtocin, vasotocin, seritocin, asvatocin, phasvatocin), in worms (annetocin), octopi (cephalotocin), locust (locupressin or neuropeptide F1/F2) and in molluscs (conopressins G and S) []. The pattern developed to detect this category of peptides spans their entire sequence and includes four invariant amino acid residues. .; GO: 0005185 neurohypophyseal hormone activity, 0005576 extracellular region
Probab=24.50 E-value=31 Score=14.00 Aligned_cols=7 Identities=29% Similarity=1.137 Sum_probs=4.1
Q ss_pred cccccce
Q 048221 167 FQKCKVG 173 (181)
Q Consensus 167 ~~~~~~~ 173 (181)
+|||..|
T Consensus 3 i~nCP~G 9 (9)
T PF00220_consen 3 IRNCPIG 9 (9)
T ss_pred cccCCCC
Confidence 4666654
No 209
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=24.29 E-value=32 Score=29.25 Aligned_cols=30 Identities=27% Similarity=0.293 Sum_probs=19.0
Q ss_pred HHHHHHHHhhhCCCCCCeEEEEeCCcccHHHHh
Q 048221 73 ALAYVLKKFKIDGKVPANTLVCGDSGNDAELFS 105 (181)
Q Consensus 73 al~~L~~~~~~~~i~~~~~ia~GDs~NDl~Ml~ 105 (181)
.+..|...-++.|+ .+++|||+.|-+-|=+
T Consensus 163 ~~D~lf~~a~~~gi---~tigIGDGGNEiGMG~ 192 (291)
T PF14336_consen 163 PLDDLFLAAKEPGI---PTIGIGDGGNEIGMGN 192 (291)
T ss_pred cHHHHHHHhhcCCC---CEEEECCCchhcccCh
Confidence 34444444321144 6999999999887744
No 210
>PTZ00071 40S ribosomal protein S24; Provisional
Probab=23.74 E-value=2.4e+02 Score=21.25 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=27.0
Q ss_pred cEEEEeeCC---CCHHHHHHHHHHHhhhCC-CCCCeEEEEe
Q 048221 59 MALDVLPKG---AGKGQALAYVLKKFKIDG-KVPANTLVCG 95 (181)
Q Consensus 59 ~~leI~~~~---~~Kg~al~~L~~~~~~~~-i~~~~~ia~G 95 (181)
-.++|.+.+ .+|..--+.|++.| + .+++.++++|
T Consensus 24 ~~~~v~Hpg~~TpSr~eirekLA~~~---~v~d~~~Vvv~~ 61 (132)
T PTZ00071 24 FVVEVLHPGKGTVSKKDIKEKLAKQY---KVADARTIVLFG 61 (132)
T ss_pred EEEEEEeCCCCCCCHHHHHHHHHHHh---CCCCCCEEEEEc
Confidence 345666555 69999999999999 8 6888888887
No 211
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=22.34 E-value=1e+02 Score=25.25 Aligned_cols=30 Identities=23% Similarity=0.219 Sum_probs=25.8
Q ss_pred CCCC-CeEEEEeCCcccHHHHhCCCceEEEec
Q 048221 85 GKVP-ANTLVCGDSGNDAELFSVPDIYGVMVS 115 (181)
Q Consensus 85 ~i~~-~~~ia~GDs~NDl~Ml~~a~~~~vam~ 115 (181)
|.++ +.+++|.|+.+-+.+-..+| .-+.+-
T Consensus 165 ~~~~~~k~lVfeds~~Gv~aa~aag-m~vi~v 195 (222)
T KOG2914|consen 165 GVPPPSKCLVFEDSPVGVQAAKAAG-MQVVGV 195 (222)
T ss_pred CCCCccceEEECCCHHHHHHHHhcC-CeEEEe
Confidence 7788 99999999999999999999 555443
No 212
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ. This clade of sequences is highly similar to the HisF protein, but generally represents the second HisF homolog in the genome where the other is an authentic HisF observed in the context of a complete histidine biosynthesis operon. The similarity between these WbuZ sequences and true HisFs is such that often the closest match by BLAST of a WbuZ is a HisF. Only by making a multiple sequence alignment is the homology relationship among the WbuZ sequences made apparent. WbuZ genes are invariably observed in the presence of a homolog of the HisH protein (designated WbuY) and a proposed N-acetyl sugar amidotransferase designated in WbuX in E. coli, IfnA in P. aeriginosa and PseA in C. jejuni. Similarly, this trio of genes is invariably found in the context of saccharide biosynthesis loci. It has been shown that the WbuYZ homologs are not essential components of the activity expressed by WbuX, leading to the proposal that these to pr
Probab=21.90 E-value=2.1e+02 Score=22.83 Aligned_cols=28 Identities=14% Similarity=0.010 Sum_probs=21.5
Q ss_pred eEEEEeC--CcccHHH-HhCCCceEEEecCC
Q 048221 90 NTLVCGD--SGNDAEL-FSVPDIYGVMVSNS 117 (181)
Q Consensus 90 ~~ia~GD--s~NDl~M-l~~a~~~~vam~Na 117 (181)
.+++.|+ +..|+.- ++..|+.+++++.|
T Consensus 199 pvia~GGi~s~~di~~~l~~~gadgV~vg~a 229 (232)
T TIGR03572 199 PVIALGGAGSLDDLVEVALEAGASAVAAASL 229 (232)
T ss_pred CEEEECCCCCHHHHHHHHHHcCCCEEEEehh
Confidence 5999996 5678777 77777778888765
No 213
>PF04558 tRNA_synt_1c_R1: Glutaminyl-tRNA synthetase, non-specific RNA binding region part 1 ; InterPro: IPR007639 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This is a domain found N-terminal to the catalytic domain of glutaminyl-tRNA synthetase (6.1.1.18 from EC) in eukaryotes but not in Escherichia coli. This domain is thought to bind RNA in a non-specific manner, enhancing interactions between the tRNA and enzyme, but is not essential for enzyme function [].; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3TL4_X.
Probab=21.31 E-value=29 Score=27.00 Aligned_cols=34 Identities=26% Similarity=0.562 Sum_probs=18.7
Q ss_pred chHHHHHHHHhhCCCCCCCCCcccc-ccccceeEEE
Q 048221 143 AARIMQAIGKFGLGPNVSPRDIRDF-QKCKVGISVL 177 (181)
Q Consensus 143 ~~Gv~~~l~~~~l~~~~~~~~~~~~-~~~~~~~~~~ 177 (181)
..-+-.+++.+...++ .|=|..+| +.|+|||.|-
T Consensus 84 ~~Ql~AA~~Yl~~~~~-~~~d~~~Fe~~cGVGV~VT 118 (164)
T PF04558_consen 84 NLQLDAALKYLKSNPS-EPIDVAEFEKACGVGVVVT 118 (164)
T ss_dssp HHHHHHHHHHHHHHGG--G--HHHHHHTTTTT----
T ss_pred HHHHHHHHHHHHHCCC-CCCCHHHHHHHcCCCeEEC
Confidence 4566677776665555 56666676 5799999873
No 214
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=21.05 E-value=2.8e+02 Score=19.42 Aligned_cols=63 Identities=16% Similarity=0.135 Sum_probs=34.8
Q ss_pred eEEEEeCCcccHHHHhCCCceEEEecCChHHHHHHhchh-cCCCCccccccCCcchHHHHHHHHh
Q 048221 90 NTLVCGDSGNDAELFSVPDIYGVMVSNSQEELLQWHAEN-AKDNPKIIHATERCAARIMQAIGKF 153 (181)
Q Consensus 90 ~~ia~GDs~NDl~Ml~~a~~~~vam~Na~~~lk~~A~~v-~~~~~~~~~~~~~~~~Gv~~~l~~~ 153 (181)
++.++|| ..-+.-|+.+|+..+.+....+++.+.-... ....--+.+.+..-.+.+.+.++++
T Consensus 2 kIaVIGD-~dtv~GFrLaGi~~~~~~~~~ee~~~~l~~l~~~~d~gII~Ite~~~~~i~e~i~~~ 65 (100)
T PRK02228 2 EIAVIGS-PEFTTGFRLAGIRKVYEVPDDEKLDEAVEEVLEDDDVGILVMHDDDLEKLPRRLRRT 65 (100)
T ss_pred EEEEEeC-HHHHHHHHHcCCceEEeeCCHHHHHHHHHHHhhCCCEEEEEEehhHhHhhHHHHHHH
Confidence 4789999 8888889999943354333334444333322 2222223333333345567777763
No 215
>COG1058 CinA Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]
Probab=20.65 E-value=76 Score=26.61 Aligned_cols=80 Identities=9% Similarity=0.005 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHhhhCCCCCCeEEEEeCCcccHH-----HHhCCCceEEEecC---ChHH-HH-HHhchhcCCCCcccccc
Q 048221 70 KGQALAYVLKKFKIDGKVPANTLVCGDSGNDAE-----LFSVPDIYGVMVSN---SQEE-LL-QWHAENAKDNPKIIHAT 139 (181)
Q Consensus 70 Kg~al~~L~~~~~~~~i~~~~~ia~GDs~NDl~-----Ml~~a~~~~vam~N---a~~~-lk-~~A~~v~~~~~~~~~~~ 139 (181)
.-+=.+||.+++...|++..+..++||...++. +++.++ +-|+-|- -+++ .+ .+|+..-...
T Consensus 19 vdtNa~~la~~L~~~G~~v~~~~~VgD~~~~I~~~l~~a~~r~D-~vI~tGGLGPT~DDiT~e~vAka~g~~l------- 90 (255)
T COG1058 19 VDTNAAFLADELTELGVDLARITTVGDNPDRIVEALREASERAD-VVITTGGLGPTHDDLTAEAVAKALGRPL------- 90 (255)
T ss_pred ecchHHHHHHHHHhcCceEEEEEecCCCHHHHHHHHHHHHhCCC-EEEECCCcCCCccHhHHHHHHHHhCCCc-------
Confidence 334456777776666999999999999999984 566677 5555442 2233 22 3333332221
Q ss_pred CCcchHHHHHHHHhhCCCC
Q 048221 140 ERCAARIMQAIGKFGLGPN 158 (181)
Q Consensus 140 ~~~~~Gv~~~l~~~~l~~~ 158 (181)
.-+..+.+.|++++...|
T Consensus 91 -v~~~~al~~i~~~~~~r~ 108 (255)
T COG1058 91 -VLDEEALAMIEEKYAKRG 108 (255)
T ss_pred -ccCHHHHHHHHHHHHhcC
Confidence 224566666766665444
No 216
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones]
Probab=20.11 E-value=3.9e+02 Score=23.72 Aligned_cols=94 Identities=19% Similarity=0.184 Sum_probs=56.1
Q ss_pred EcCcEEEEeeCCCCHHHHHHHHHHHhhhCCCCCC--------eEEEEeCCccc--HHHHhCCCceEEEecCC----hHHH
Q 048221 56 SSGMALDVLPKGAGKGQALAYVLKKFKIDGKVPA--------NTLVCGDSGND--AELFSVPDIYGVMVSNS----QEEL 121 (181)
Q Consensus 56 s~~~~leI~~~~~~Kg~al~~L~~~~~~~~i~~~--------~~ia~GDs~ND--l~Ml~~a~~~~vam~Na----~~~l 121 (181)
+-.+-+-|-|-|.+|--=.+.|.+.+ +++.. +.-.+|+.--- +.+|+.++ +-|.-+.- -+++
T Consensus 96 ~KSNILLiGPTGsGKTlLAqTLAk~L---nVPFaiADATtLTEAGYVGEDVENillkLlqaad-ydV~rAerGIIyIDEI 171 (408)
T COG1219 96 SKSNILLIGPTGSGKTLLAQTLAKIL---NVPFAIADATTLTEAGYVGEDVENILLKLLQAAD-YDVERAERGIIYIDEI 171 (408)
T ss_pred eeccEEEECCCCCcHHHHHHHHHHHh---CCCeeeccccchhhccccchhHHHHHHHHHHHcc-cCHHHHhCCeEEEech
Confidence 44566678999999999999999999 87632 22223322111 12344444 22211100 1344
Q ss_pred HHHhchhcCCCCccccccCCcchHHHHHHHHhhCCC
Q 048221 122 LQWHAENAKDNPKIIHATERCAARIMQAIGKFGLGP 157 (181)
Q Consensus 122 k~~A~~v~~~~~~~~~~~~~~~~Gv~~~l~~~~l~~ 157 (181)
.++| ....+..+|++...+||-+++.+++-+.
T Consensus 172 DKIa----rkSeN~SITRDVSGEGVQQALLKiiEGT 203 (408)
T COG1219 172 DKIA----RKSENPSITRDVSGEGVQQALLKIIEGT 203 (408)
T ss_pred hhhh----ccCCCCCcccccCchHHHHHHHHHHcCc
Confidence 4433 2334556788888999999999998665
Done!