Query 048223
Match_columns 286
No_of_seqs 159 out of 1208
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 12:58:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048223.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/048223hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oqya1 a.5.2.1 (A:160-200) DN 78.1 0.57 4.2E-05 26.5 2.0 25 153-177 4-28 (41)
2 d1oqya1 a.5.2.1 (A:160-200) DN 76.2 2 0.00015 24.1 4.0 26 11-36 3-28 (41)
3 d2hsga1 a.35.1.5 (A:2-58) Gluc 58.7 5.1 0.00037 24.1 3.5 41 92-135 9-49 (57)
4 d1wiva_ a.5.2.1 (A:) Ubiquitin 58.2 6.5 0.00047 24.8 4.2 36 155-197 31-66 (73)
5 d1uxda_ a.35.1.5 (A:) Fructose 56.2 3.3 0.00024 25.1 2.3 44 92-135 8-51 (59)
6 d2hsga1 a.35.1.5 (A:2-58) Gluc 55.5 16 0.0011 21.7 5.5 45 159-207 7-51 (57)
7 d1g8ma1 c.24.1.3 (A:4-200) IMP 54.2 9.6 0.0007 29.0 5.2 65 4-89 6-71 (197)
8 d2g3qa1 a.5.2.1 (A:1339-1381) 53.9 4.2 0.00031 22.8 2.2 25 155-179 6-30 (43)
9 d1qpza1 a.35.1.5 (A:2-58) Puri 53.9 16 0.0012 21.6 5.3 45 159-207 6-50 (57)
10 d1cuka1 a.5.1.1 (A:156-203) DN 53.5 7.4 0.00054 22.4 3.5 28 151-178 3-30 (48)
11 d1efaa1 a.35.1.5 (A:2-60) Lac 51.7 10 0.00073 22.8 4.1 41 92-135 10-50 (59)
12 d1qpza1 a.35.1.5 (A:2-58) Puri 51.1 6.8 0.0005 23.4 3.2 41 92-135 8-48 (57)
13 d1vg5a_ a.5.2.1 (A:) Rhomboid 46.1 5.7 0.00041 25.1 2.3 38 154-198 30-67 (73)
14 d1wgna_ a.5.2.1 (A:) Ubiquitin 44.9 5 0.00036 24.6 1.8 38 154-198 20-57 (63)
15 d1efaa1 a.35.1.5 (A:2-60) Lac 44.5 22 0.0016 21.1 4.9 44 160-207 9-52 (59)
16 d1zcza1 c.24.1.3 (A:1-157) IMP 44.3 6.9 0.0005 28.7 2.8 64 4-88 5-69 (157)
17 d1rw1a_ c.47.1.12 (A:) Hypothe 42.1 14 0.001 25.0 4.1 67 11-80 12-93 (114)
18 d1uxda_ a.35.1.5 (A:) Fructose 37.3 9.8 0.00071 22.8 2.3 46 160-206 7-52 (59)
19 d1z96a1 a.5.2.1 (A:295-332) UB 35.1 26 0.0019 18.0 3.4 23 153-175 2-24 (38)
20 d2pfxa1 a.152.1.3 (A:1-190) Un 34.9 11 0.00082 28.0 2.9 139 11-175 21-162 (190)
21 d1wjia_ a.5.2.1 (A:) Tudor dom 34.7 16 0.0011 22.1 3.0 38 155-199 11-48 (63)
22 d1oqya2 a.5.2.1 (A:317-360) DN 34.7 15 0.0011 20.5 2.6 20 155-174 6-25 (44)
23 d2crna1 a.5.2.1 (A:8-58) Suppr 34.3 18 0.0013 20.9 3.1 37 157-199 6-42 (51)
24 d1ttea1 a.5.2.1 (A:161-215) Ub 32.3 21 0.0015 20.9 3.1 22 156-177 12-33 (55)
25 d1zcza1 c.24.1.3 (A:1-157) IMP 29.5 8 0.00058 28.3 1.0 38 86-124 33-70 (157)
26 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 28.6 11 0.00079 21.9 1.3 15 119-133 8-22 (50)
27 d1whca_ a.5.2.1 (A:) UBA/UBX 3 28.5 23 0.0016 21.4 3.0 39 156-200 12-50 (64)
28 d2af7a1 a.152.1.2 (A:1-119) Ga 27.2 62 0.0045 21.7 5.6 28 148-175 68-95 (119)
29 d1jmxa1 a.3.1.7 (A:2-85) Quino 26.8 37 0.0027 21.6 4.0 30 183-212 51-80 (84)
30 d1dxsa_ a.60.1.2 (A:) C-termin 26.4 38 0.0028 19.6 3.7 15 124-138 4-18 (57)
31 d1veka_ a.5.2.1 (A:) Ubiquitin 26.3 36 0.0026 21.7 3.8 39 156-200 32-70 (84)
32 d1sfxa_ a.4.5.50 (A:) Hypothet 26.1 77 0.0056 20.6 5.9 19 147-165 45-63 (109)
33 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 26.0 25 0.0018 20.3 2.6 36 156-197 15-50 (51)
34 d1pbya1 a.3.1.7 (A:1-85) Quino 24.2 52 0.0038 20.9 4.4 24 183-206 51-74 (85)
35 d1tc3c_ a.4.1.2 (C:) Transposa 24.0 47 0.0034 18.8 3.4 24 154-177 11-34 (51)
36 d2daha1 a.5.2.1 (A:8-48) Ubiqu 23.2 11 0.00083 20.8 0.6 12 122-133 5-16 (41)
37 d1z3ea1 c.47.1.12 (A:1-114) Re 23.2 45 0.0033 22.2 4.1 81 11-104 12-113 (114)
38 d1g8ma1 c.24.1.3 (A:4-200) IMP 22.9 12 0.00089 28.3 1.0 37 86-123 34-70 (197)
39 d1j9ba_ c.47.1.12 (A:) Arsenat 22.9 30 0.0022 24.2 3.2 88 11-108 12-117 (138)
40 d1ow5a_ a.60.1.2 (A:) Serine/t 22.6 68 0.005 18.4 4.8 17 124-140 5-21 (60)
41 d2gf5a1 a.77.1.2 (A:89-191) FA 22.2 52 0.0038 21.3 4.3 21 159-179 27-47 (103)
42 d1q08a_ a.6.1.3 (A:) Transcrip 22.0 33 0.0024 22.2 3.1 16 160-175 12-27 (94)
43 d1a9xa1 a.92.1.1 (A:403-555) C 21.7 54 0.004 23.3 4.5 59 94-174 43-104 (153)
44 d1dzfa1 c.52.3.1 (A:5-143) Euk 21.7 30 0.0022 24.4 3.0 35 222-261 10-44 (139)
45 d1r8ea1 a.6.1.3 (A:3-120) Tran 21.6 45 0.0033 22.2 3.9 21 155-175 52-72 (118)
46 d1k6ya1 a.4.10.1 (A:1-46) N-te 21.0 25 0.0018 19.9 1.9 26 155-180 17-43 (46)
47 d1yira2 d.41.2.2 (A:4-144) Nic 20.3 95 0.0069 21.6 5.5 46 152-206 54-99 (141)
No 1
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.08 E-value=0.57 Score=26.53 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=19.7
Q ss_pred HHHHHHHHHHcCCCHHHHHHHhhcC
Q 048223 153 WESKLHVYKKWGWSEQEWLAAFLKC 177 (286)
Q Consensus 153 l~~~v~~l~~lG~s~~~i~~~i~~~ 177 (286)
++++|+-+.++||+++++.+.+++.
T Consensus 4 ~e~~i~~L~~MGF~~~~a~~AL~~~ 28 (41)
T d1oqya1 4 YETMLTEIMSMGYERERVVAALRAS 28 (41)
T ss_dssp HHHHHHHHHTTTCCSHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 5677888888999988888877654
No 2
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.23 E-value=2 Score=24.11 Aligned_cols=26 Identities=15% Similarity=0.036 Sum_probs=17.7
Q ss_pred cHHHHHHHHhhCCCChhhHHHHHhhC
Q 048223 11 TLLRKLEFFHCEGISNPDTVKILSKY 36 (286)
Q Consensus 11 ~l~~~l~fL~~~G~~~~~i~~i~~~~ 36 (286)
+.++.|+-|.++||++++..+.+.+.
T Consensus 3 ~~e~~i~~L~~MGF~~~~a~~AL~~~ 28 (41)
T d1oqya1 3 EYETMLTEIMSMGYERERVVAALRAS 28 (41)
T ss_dssp THHHHHHHHHTTTCCSHHHHHHHHHS
T ss_pred hHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 35566777777777777777766554
No 3
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=58.71 E-value=5.1 Score=24.05 Aligned_cols=41 Identities=17% Similarity=0.392 Sum_probs=31.2
Q ss_pred HhcCCCchhHhhhhccCCeeEEecchhHHHHHHHHHHcCCCCcc
Q 048223 92 RDSGVPESDIIKSIESWPKLFLRHPKFFEKNVASVKEMGINPLR 135 (286)
Q Consensus 92 ~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~~l~~lG~~~~~ 135 (286)
+..|++..-+.+++...|. .++++-+...+..+++|+.++.
T Consensus 9 ~~agvS~~TVSr~Ln~~~~---Vs~~tr~rV~~aa~~lgY~pn~ 49 (57)
T d2hsga1 9 REASVSMATVSRVVNGNPN---VKPSTRKKVLETIERLGYRPNA 49 (57)
T ss_dssp HHTTSCHHHHHHHHTTCTT---SCHHHHHHHHHHHHHHTCCSCH
T ss_pred HHHCcCHHHHHHHhCCCCc---CCHHHHHHHHHHHHHHCcCCCH
Confidence 4589999999999988774 3566666666777888887763
No 4
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=58.17 E-value=6.5 Score=24.81 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHh
Q 048223 155 SKLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVN 197 (286)
Q Consensus 155 ~~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~ 197 (286)
..|+-|.++||+++++.+.++.+ ..+++.-++||.+
T Consensus 31 ~~i~~L~~MGF~~~~a~~AL~~~-------~~n~e~Av~~Lls 66 (73)
T d1wiva_ 31 SSVDTLLSFGFAEDVARKALKAS-------GGDIEKATDWVFN 66 (73)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHT-------TSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHc-------CCCHHHHHHHHHc
Confidence 45777788888888887776644 2256677777776
No 5
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.21 E-value=3.3 Score=25.14 Aligned_cols=44 Identities=27% Similarity=0.260 Sum_probs=31.0
Q ss_pred HhcCCCchhHhhhhccCCeeEEecchhHHHHHHHHHHcCCCCcc
Q 048223 92 RDSGVPESDIIKSIESWPKLFLRHPKFFEKNVASVKEMGINPLR 135 (286)
Q Consensus 92 ~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~~l~~lG~~~~~ 135 (286)
+..|++..-|.++|...|.-...++++-+...+..+++|+.++.
T Consensus 8 ~~agvS~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~lgY~pn~ 51 (59)
T d1uxda_ 8 RLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNA 51 (59)
T ss_dssp HHHTSCTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHHHTCCCCS
T ss_pred HHHCcCHHHHHHHHcCCCCcCcCCHHHHHHHHHHHHHHCCCcCH
Confidence 34788888888888877654434566666666777888887653
No 6
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=55.49 E-value=16 Score=21.67 Aligned_cols=45 Identities=13% Similarity=0.167 Sum_probs=32.1
Q ss_pred HHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcCCChHHHh
Q 048223 159 VYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMGWEPAVIA 207 (286)
Q Consensus 159 ~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g~~~~~i~ 207 (286)
.-+..|+|...+.+.+...|. .|+++-++-.+...+ +|+.+...+
T Consensus 7 vA~~agvS~~TVSr~Ln~~~~---Vs~~tr~rV~~aa~~-lgY~pn~~A 51 (57)
T d2hsga1 7 VAREASVSMATVSRVVNGNPN---VKPSTRKKVLETIER-LGYRPNAVA 51 (57)
T ss_dssp HHHHTTSCHHHHHHHHTTCTT---SCHHHHHHHHHHHHH-HTCCSCHHH
T ss_pred HHHHHCcCHHHHHHHhCCCCc---CCHHHHHHHHHHHHH-HCcCCCHHH
Confidence 345789999999999987774 466666665555555 998776543
No 7
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=54.17 E-value=9.6 Score=28.97 Aligned_cols=65 Identities=23% Similarity=0.253 Sum_probs=45.7
Q ss_pred eeecCcc-cHHHHHHHHhhCCCChhhHHHHHhhCCCceeccccCcchhHHHHhHhhhcCchHHHHHHHhCCcccccCcch
Q 048223 4 VLLLSPE-TLLRKLEFFHCEGISNPDTVKILSKYPGLLSRSLDNHLIPTFNSLSHLLHSSEKTIALIIRFPYILYHDADY 82 (286)
Q Consensus 4 lL~~~~~-~l~~~l~fL~~~G~~~~~i~~i~~~~P~il~~~~~~~l~~~~~~L~~~g~~~~~i~~ii~~~P~iL~~s~e~ 82 (286)
+++.+-. .+.+...+|.++|+ .|++. .....+|++.|+.-.+|.++ ..+|.+|.-.+..
T Consensus 6 lISVsDK~~l~~la~~L~~~g~-------------~IisT------gGTak~L~~~gi~v~~Vs~~-tg~peil~GRVKT 65 (197)
T d1g8ma1 6 LLSVSEKAGLVEFARSLNALGL-------------GLIAS------GGTATALRDAGLPVRDVSDL-TGFPEMLGGRVKT 65 (197)
T ss_dssp EEEESCCTTHHHHHHHHHHTTC-------------EEEEC------HHHHHHHHHTTCCCEEHHHH-HSCCCBGGGTBSS
T ss_pred EEEeecccCHHHHHHHHHHCCC-------------EEEEC------cHHHHHHHHhcccHHHHHhh-hcCHHHHHHHHhh
Confidence 4444433 77788888888887 35554 36778888888888888774 6888888888753
Q ss_pred hhhhHHH
Q 048223 83 YLLPNVK 89 (286)
Q Consensus 83 ~l~~~v~ 89 (286)
|-|.|.
T Consensus 66 -LhPkI~ 71 (197)
T d1g8ma1 66 -LHPAVH 71 (197)
T ss_dssp -CSHHHH
T ss_pred -ccceee
Confidence 777654
No 8
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=53.92 E-value=4.2 Score=22.77 Aligned_cols=25 Identities=28% Similarity=0.537 Sum_probs=19.3
Q ss_pred HHHHHHHHcCCCHHHHHHHhhcCCc
Q 048223 155 SKLHVYKKWGWSEQEWLAAFLKCPW 179 (286)
Q Consensus 155 ~~v~~l~~lG~s~~~i~~~i~~~P~ 179 (286)
..|+-+.++||++++..+.+.++-+
T Consensus 6 ~ai~eL~~MGF~e~~A~~AL~k~~w 30 (43)
T d2g3qa1 6 LAVEELSGMGFTEEEAHNALEKCNW 30 (43)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHcCC
Confidence 3567778899999998888876644
No 9
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=53.86 E-value=16 Score=21.62 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=31.4
Q ss_pred HHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcCCChHHHh
Q 048223 159 VYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMGWEPAVIA 207 (286)
Q Consensus 159 ~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g~~~~~i~ 207 (286)
.-+..|+|...+-+.+...|. .++++-++-.+...+ +|+.+..++
T Consensus 6 vA~~agVS~sTVSr~ln~~~~---vs~~tr~rV~~~a~~-lgY~pn~~A 50 (57)
T d1qpza1 6 VAKRANVSTTTVSHVINKTRF---VAEETRNAVWAAIKE-LHYSPSAVA 50 (57)
T ss_dssp HHHHHTSCHHHHHHHHHTCSC---CCHHHHHHHHHHHHH-HTCCCCHHH
T ss_pred HHHHHCcCHHHHHHHHCCCCc---cCHHHHHHHHHHHHH-HCCCCCHHH
Confidence 345789999999999987774 466655555555554 999877654
No 10
>d1cuka1 a.5.1.1 (A:156-203) DNA helicase RuvA subunit, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=53.47 E-value=7.4 Score=22.41 Aligned_cols=28 Identities=14% Similarity=0.047 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHcCCCHHHHHHHhhcCC
Q 048223 151 SQWESKLHVYKKWGWSEQEWLAAFLKCP 178 (286)
Q Consensus 151 ~~l~~~v~~l~~lG~s~~~i~~~i~~~P 178 (286)
+...+.+.-|..||+++.|..+++.+..
T Consensus 3 ~~~~eAi~AL~~LGY~~~ea~~av~~i~ 30 (48)
T d1cuka1 3 DAEQEAVARLVALGYKPQEASRMVSKIA 30 (48)
T ss_dssp HHHHHHHHHHHHHTCCHHHHHHHHHHSC
T ss_pred chHHHHHHHHHHcCCCHHHHHHHHHHhc
Confidence 4456788889999999999999998654
No 11
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=51.73 E-value=10 Score=22.82 Aligned_cols=41 Identities=22% Similarity=0.222 Sum_probs=31.0
Q ss_pred HhcCCCchhHhhhhccCCeeEEecchhHHHHHHHHHHcCCCCcc
Q 048223 92 RDSGVPESDIIKSIESWPKLFLRHPKFFEKNVASVKEMGINPLR 135 (286)
Q Consensus 92 ~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~~l~~lG~~~~~ 135 (286)
+..|++..-|.+++...|. .++++-+...+..+++|+.++.
T Consensus 10 ~~agvS~sTVSr~l~~~~~---vs~~tr~rI~~~a~~lgY~pn~ 50 (59)
T d1efaa1 10 EYAGVSYQTVSRVVNQASH---VSAKTREKVEAAMAELNYIPNR 50 (59)
T ss_dssp HTTTSCHHHHHHHHTTCSS---CCTHHHHHHHHHHHHHTCCCCH
T ss_pred HHHCCCHHHHHHHHCCCCc---CCHHHHHHHHHHHHHHCCCcCH
Confidence 3489999999999987765 3566677777777888888764
No 12
>d1qpza1 a.35.1.5 (A:2-58) Purine repressor (PurR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=51.08 E-value=6.8 Score=23.43 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=30.6
Q ss_pred HhcCCCchhHhhhhccCCeeEEecchhHHHHHHHHHHcCCCCcc
Q 048223 92 RDSGVPESDIIKSIESWPKLFLRHPKFFEKNVASVKEMGINPLR 135 (286)
Q Consensus 92 ~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~~l~~lG~~~~~ 135 (286)
+..|++..-|.+++...|. .++++-+...+..+++|+.++.
T Consensus 8 ~~agVS~sTVSr~ln~~~~---vs~~tr~rV~~~a~~lgY~pn~ 48 (57)
T d1qpza1 8 KRANVSTTTVSHVINKTRF---VAEETRNAVWAAIKELHYSPSA 48 (57)
T ss_dssp HHHTSCHHHHHHHHHTCSC---CCHHHHHHHHHHHHHHTCCCCH
T ss_pred HHHCcCHHHHHHHHCCCCc---cCHHHHHHHHHHHHHHCCCCCH
Confidence 4479999999999987774 3556666666777888888764
No 13
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=46.14 E-value=5.7 Score=25.12 Aligned_cols=38 Identities=13% Similarity=0.323 Sum_probs=27.4
Q ss_pred HHHHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhh
Q 048223 154 ESKLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNG 198 (286)
Q Consensus 154 ~~~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~ 198 (286)
++.|+-|.++||++++..+.+..+ ..+++.-++||...
T Consensus 30 ee~i~~L~~MGF~~~~a~~AL~~~-------~~n~e~A~~~Ll~~ 67 (73)
T d1vg5a_ 30 EEQIQKLVAMGFDRTQVEVALAAA-------DDDLTVAVEILMSQ 67 (73)
T ss_dssp HHHHHHHHTTTCCHHHHHHHHHHH-------TSCHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHh-------CCCHHHHHHHHHhC
Confidence 456778889999998887766532 23577788888764
No 14
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.92 E-value=5 Score=24.62 Aligned_cols=38 Identities=21% Similarity=0.296 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhh
Q 048223 154 ESKLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNG 198 (286)
Q Consensus 154 ~~~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~ 198 (286)
++.|+.|.++||+++++.+.+..+ + .+++.-++||...
T Consensus 20 e~~v~~L~~MGF~~~~a~~AL~~~------~-~n~e~A~~~Lls~ 57 (63)
T d1wgna_ 20 RQCVETVVNMGYSYECVLRAMKKK------G-ENIEQILDYLFAH 57 (63)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH------C-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHc------C-CCHHHHHHHHHhC
Confidence 578999999999999988876532 2 2577888888763
No 15
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.54 E-value=22 Score=21.13 Aligned_cols=44 Identities=14% Similarity=0.073 Sum_probs=30.4
Q ss_pred HHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcCCChHHHh
Q 048223 160 YKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMGWEPAVIA 207 (286)
Q Consensus 160 l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g~~~~~i~ 207 (286)
-+..|+|...+...+...|. .|+++.+.-.+...+ +|+.+..++
T Consensus 9 A~~agvS~sTVSr~l~~~~~---vs~~tr~rI~~~a~~-lgY~pn~~A 52 (59)
T d1efaa1 9 AEYAGVSYQTVSRVVNQASH---VSAKTREKVEAAMAE-LNYIPNRVA 52 (59)
T ss_dssp HHTTTSCHHHHHHHHTTCSS---CCTHHHHHHHHHHHH-HTCCCCHHH
T ss_pred HHHHCCCHHHHHHHHCCCCc---CCHHHHHHHHHHHHH-HCCCcCHHH
Confidence 34689999999888876664 366665555555555 888876554
No 16
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=44.31 E-value=6.9 Score=28.68 Aligned_cols=64 Identities=19% Similarity=0.146 Sum_probs=40.5
Q ss_pred eeecCcc-cHHHHHHHHhhCCCChhhHHHHHhhCCCceeccccCcchhHHHHhHhhhcCchHHHHHHHhCCcccccCcch
Q 048223 4 VLLLSPE-TLLRKLEFFHCEGISNPDTVKILSKYPGLLSRSLDNHLIPTFNSLSHLLHSSEKTIALIIRFPYILYHDADY 82 (286)
Q Consensus 4 lL~~~~~-~l~~~l~fL~~~G~~~~~i~~i~~~~P~il~~~~~~~l~~~~~~L~~~g~~~~~i~~ii~~~P~iL~~s~e~ 82 (286)
+++.+-. .+.+..+.|.++|+ .|++. ...-++|++.|++-.++.+ +..+|.+|...+..
T Consensus 5 LISVsDK~~l~~la~~L~~~g~-------------~IisT------gGTak~L~~~Gi~v~~Vs~-~Tg~peil~gRvKT 64 (157)
T d1zcza1 5 LVSLYEKEKYLDILRELHEKGW-------------EIWAS------SGTAKFLKSNGIEANDVST-ITGFENLLGGLVKT 64 (157)
T ss_dssp EEECSSTGGGHHHHHHHHHTTC-------------EEEEC------HHHHHHHHHTTCCCEEGGG-GSCCCCGGGGTTTT
T ss_pred EEEeecccchHHHHHHHHHCCC-------------EEEEc------ChHHHHHHHhhhhhhHHHH-HhhHHHHHHhhhcc
Confidence 3444323 67777777777776 24443 3566777777777777765 44777777777653
Q ss_pred hhhhHH
Q 048223 83 YLLPNV 88 (286)
Q Consensus 83 ~l~~~v 88 (286)
+-|++
T Consensus 65 -Lhp~i 69 (157)
T d1zcza1 65 -LHPEI 69 (157)
T ss_dssp -CCHHH
T ss_pred -chHHH
Confidence 77764
No 17
>d1rw1a_ c.47.1.12 (A:) Hypothetical protein PA3664 (YffB) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.05 E-value=14 Score=25.01 Aligned_cols=67 Identities=15% Similarity=0.160 Sum_probs=35.0
Q ss_pred cHHHHHHHHhhCC------------CChhhHHHHHhhCCCceeccccCcchhHHHHhH---hhhcCchHHHHHHHhCCcc
Q 048223 11 TLLRKLEFFHCEG------------ISNPDTVKILSKYPGLLSRSLDNHLIPTFNSLS---HLLHSSEKTIALIIRFPYI 75 (286)
Q Consensus 11 ~l~~~l~fL~~~G------------~~~~~i~~i~~~~P~il~~~~~~~l~~~~~~L~---~~g~~~~~i~~ii~~~P~i 75 (286)
.-+..++||.+.| ++.+++..++...+. ..+.+.=.+.+..+. .-.++.+++..++.++|.+
T Consensus 12 ~srka~~~L~~~~i~~~~idy~k~pls~~eL~~ll~~~g~---~~l~~~r~~~~k~l~~~~~~~ls~~e~i~~i~~~P~L 88 (114)
T d1rw1a_ 12 TMKKARTWLDEHKVAYDFHDYKAVGIDREHLRRWCAEHGW---QTVLNRAGTTFRKLDEAQKADLDEAKAIELMLAQPSM 88 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEEHHHHCCCHHHHHHHHHHHCH---HHHBCTTSHHHHTSCHHHHTTCCHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHcCCCeEEEEccccCCCHHHHHHHHHhcch---HHHhhhhhHHHHHhhhhhhccccHHHHHHHHHhCcce
Confidence 3455667777766 556666666655431 001100011222211 1235667777777777777
Q ss_pred cccCc
Q 048223 76 LYHDA 80 (286)
Q Consensus 76 L~~s~ 80 (286)
+...+
T Consensus 89 ikRPI 93 (114)
T d1rw1a_ 89 IKRPV 93 (114)
T ss_dssp BCSCE
T ss_pred EeCCE
Confidence 77765
No 18
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=37.33 E-value=9.8 Score=22.82 Aligned_cols=46 Identities=11% Similarity=0.059 Sum_probs=32.4
Q ss_pred HHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcCCChHHH
Q 048223 160 YKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMGWEPAVI 206 (286)
Q Consensus 160 l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g~~~~~i 206 (286)
-+..|+|...+.+.+...|.-...|+++-+.-.+...+ +|+.+...
T Consensus 7 A~~agvS~sTVSrvLn~~~~~~~vs~~tr~rV~~~a~~-lgY~pn~~ 52 (59)
T d1uxda_ 7 ARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE-HNYHPNAV 52 (59)
T ss_dssp HHHHTSCTTHHHHHHHTCGGGTTCTTTTHHHHHHHHHH-HTCCCCSC
T ss_pred HHHHCcCHHHHHHHHcCCCCcCcCCHHHHHHHHHHHHH-HCCCcCHH
Confidence 34678888888888887776555677766666666665 88865543
No 19
>d1z96a1 a.5.2.1 (A:295-332) UBA-domain protein mud1 {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=35.11 E-value=26 Score=18.02 Aligned_cols=23 Identities=22% Similarity=0.163 Sum_probs=16.1
Q ss_pred HHHHHHHHHHcCCCHHHHHHHhh
Q 048223 153 WESKLHVYKKWGWSEQEWLAAFL 175 (286)
Q Consensus 153 l~~~v~~l~~lG~s~~~i~~~i~ 175 (286)
+..+|..+.++||++-+..+.+.
T Consensus 2 lnskiaqlvsmgfdpleaaqald 24 (38)
T d1z96a1 2 LNSKIAQLVSMGFDPLEAAQALD 24 (38)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHH
T ss_pred cchHHHHHHHcCCCHHHHHHHHh
Confidence 34677778888888877666553
No 20
>d2pfxa1 a.152.1.3 (A:1-190) Uncharacterized protein TM1040_2465 {Silicibacter sp. tm1040 [TaxId: 292414]}
Probab=34.91 E-value=11 Score=28.02 Aligned_cols=139 Identities=10% Similarity=-0.017 Sum_probs=73.3
Q ss_pred cHHHHHHHHhh-CCCChhhHHHHHhhCCCceeccccCcchhHHHH-hHhhh-cCchHHHHHHHhCCcccccCcchhhhhH
Q 048223 11 TLLRKLEFFHC-EGISNPDTVKILSKYPGLLSRSLDNHLIPTFNS-LSHLL-HSSEKTIALIIRFPYILYHDADYYLLPN 87 (286)
Q Consensus 11 ~l~~~l~fL~~-~G~~~~~i~~i~~~~P~il~~~~~~~l~~~~~~-L~~~g-~~~~~i~~ii~~~P~iL~~s~e~~l~~~ 87 (286)
++++.++-++. +|+-+ .+-+++..+|.++..- ....+. +..-| ++.....-+..+--.+-++.. ++.-.
T Consensus 21 ~~~~~~~~~~~~~G~vp-N~~~~la~~P~~l~a~-----~~~~~~~~~~~~~L~~~~rEli~l~vS~~n~C~Y--C~~~H 92 (190)
T d2pfxa1 21 ETQKYFEICQEKLGMVP-NVLKAYAFNVEKLNAF-----TAMYNDLMLGESQLSKLEREMIAVVVSSINKCFY--CLVAH 92 (190)
T ss_dssp HHHHHHHHHHHHHSSCC-HHHHHHTTSHHHHHHH-----HHHHHHHHHSSCSSCHHHHHHHHHHHHHHHTCHH--HHHHH
T ss_pred HHHHHHHHHHHHhCCCc-HHHHHHHcCHHHHHHH-----HHHHHHHHhccccccHHHHHHHHHHHHHHhCCcH--HHHHH
Confidence 67777777664 78755 6777777888776531 122221 22222 443333333323223333432 45566
Q ss_pred HHHHHhcCCCchhHhhhhccCCeeEEecchhHHHHHHHHHHcCCCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCH
Q 048223 88 VKILRDSGVPESDIIKSIESWPKLFLRHPKFFEKNVASVKEMGINPLRLKFVLAIQAKCIMSESQWESKLHVYKKWGWSE 167 (286)
Q Consensus 88 v~~L~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~~l~~lG~~~~~~~~~~~~~~l~~~~~~~l~~~v~~l~~lG~s~ 167 (286)
...++..|.+.+++..+......-. . .++.+..++|...+ +..+ ...+ ..-++-|++.||++
T Consensus 93 ~~~~~~~g~~~~~~~~i~~~~~~~~-~-~~~e~all~~a~~l---------~~~~---~~v~----d~~~~~L~~~G~sd 154 (190)
T d2pfxa1 93 GAAVRQLSGDPQLGEMLVMNYRVAP-L-DARQRVMLDFAAKM---------TRAS---AEIE----EADREVLRSHGFND 154 (190)
T ss_dssp HHHHHHHHTCHHHHHHHHHCGGGSC-C-CHHHHHHHHHHHHH---------HHHG---GGCC----HHHHHHHHHTTCCH
T ss_pred HHHHHHhcCChhhhhhHHhhcccch-h-hHHHHHHHHHHHHH---------HhCc---CCCC----HHHHHHHHHCCCCH
Confidence 6778888999888776654321111 1 12334444443321 1111 0112 23467788999999
Q ss_pred HHHHHHhh
Q 048223 168 QEWLAAFL 175 (286)
Q Consensus 168 ~~i~~~i~ 175 (286)
+||..++.
T Consensus 155 ~eI~el~~ 162 (190)
T d2pfxa1 155 RDIWDIAN 162 (190)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
No 21
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.73 E-value=16 Score=22.12 Aligned_cols=38 Identities=13% Similarity=0.278 Sum_probs=29.1
Q ss_pred HHHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhc
Q 048223 155 SKLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGM 199 (286)
Q Consensus 155 ~~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~ 199 (286)
+.|+-|.++||++....+.+..+ ...++.-++||.+..
T Consensus 11 ~~v~~L~~MGF~~~~a~~AL~~~-------~~~~e~A~~wL~~~~ 48 (63)
T d1wjia_ 11 KALKHITEMGFSKEASRQALMDN-------GNNLEAALNVLLTSN 48 (63)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHT-------TSCHHHHHHHHHHHS
T ss_pred HHHHHHHHcCCCHHHHHHHHHHh-------CCCHHHHHHHHHHCC
Confidence 46778889999999988877644 236888888998854
No 22
>d1oqya2 a.5.2.1 (A:317-360) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.70 E-value=15 Score=20.54 Aligned_cols=20 Identities=20% Similarity=0.371 Sum_probs=13.3
Q ss_pred HHHHHHHHcCCCHHHHHHHh
Q 048223 155 SKLHVYKKWGWSEQEWLAAF 174 (286)
Q Consensus 155 ~~v~~l~~lG~s~~~i~~~i 174 (286)
+.|+-|..+||++..+.+..
T Consensus 6 ~aIeRL~~LGF~r~~viqay 25 (44)
T d1oqya2 6 EAIERLKALGFPESLVIQAY 25 (44)
T ss_dssp HHHHHHHHHTCCSHHHHHHT
T ss_pred HHHHHHHHcCCCHHHHHHHH
Confidence 45666777777777766553
No 23
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.25 E-value=18 Score=20.88 Aligned_cols=37 Identities=14% Similarity=0.178 Sum_probs=21.9
Q ss_pred HHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhc
Q 048223 157 LHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGM 199 (286)
Q Consensus 157 v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~ 199 (286)
|+-|.++||++....+.+. ......++.-++|+.+.+
T Consensus 6 v~~L~~MGF~~~~a~~Al~------~t~n~~ve~A~~Wl~~h~ 42 (51)
T d2crna1 6 LEPLLAMGFPVHTALKALA------ATGRKTAEEALAWLHDHC 42 (51)
T ss_dssp HHHHHHTSCCHHHHHHHHH------HHTSCCHHHHHHHHHHHS
T ss_pred HHHHHHcCCCHHHHHHHHH------HHCCCCHHHHHHHHHHcC
Confidence 4556677888777666543 111234666677777654
No 24
>d1ttea1 a.5.2.1 (A:161-215) Ubiquitin-protein ligase ubc1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.25 E-value=21 Score=20.93 Aligned_cols=22 Identities=5% Similarity=0.270 Sum_probs=14.4
Q ss_pred HHHHHHHcCCCHHHHHHHhhcC
Q 048223 156 KLHVYKKWGWSEQEWLAAFLKC 177 (286)
Q Consensus 156 ~v~~l~~lG~s~~~i~~~i~~~ 177 (286)
-|+-|.++||++..+-..++|.
T Consensus 12 ~V~~f~~mGF~rdKvI~VLrrl 33 (55)
T d1ttea1 12 LIDEFESQGFEKDKIVEVLRRL 33 (55)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHS
T ss_pred HHHHHHHcCCCchhHHHHHHHh
Confidence 4566677777777766666543
No 25
>d1zcza1 c.24.1.3 (A:1-157) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Thermotoga maritima [TaxId: 2336]}
Probab=29.48 E-value=8 Score=28.30 Aligned_cols=38 Identities=18% Similarity=0.327 Sum_probs=32.6
Q ss_pred hHHHHHHhcCCCchhHhhhhccCCeeEEecchhHHHHHH
Q 048223 86 PNVKILRDSGVPESDIIKSIESWPKLFLRHPKFFEKNVA 124 (286)
Q Consensus 86 ~~v~~L~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v~ 124 (286)
.+..+|++.|++-.+|.+ ++.+|.+|..++.++-|++.
T Consensus 33 GTak~L~~~Gi~v~~Vs~-~Tg~peil~gRvKTLhp~i~ 70 (157)
T d1zcza1 33 GTAKFLKSNGIEANDVST-ITGFENLLGGLVKTLHPEIF 70 (157)
T ss_dssp HHHHHHHHTTCCCEEGGG-GSCCCCGGGGTTTTCCHHHH
T ss_pred hHHHHHHHhhhhhhHHHH-HhhHHHHHHhhhccchHHHH
Confidence 467899999999999988 56899999999888888763
No 26
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.59 E-value=11 Score=21.90 Aligned_cols=15 Identities=27% Similarity=0.558 Sum_probs=7.7
Q ss_pred HHHHHHHHHHcCCCC
Q 048223 119 FEKNVASVKEMGINP 133 (286)
Q Consensus 119 l~~~v~~l~~lG~~~ 133 (286)
..+-++-|+++|+.+
T Consensus 8 y~~QL~qL~~MGF~d 22 (50)
T d2dnaa1 8 FSKEMECLQAMGFVN 22 (50)
T ss_dssp THHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHcCCCC
Confidence 444455555555544
No 27
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=28.46 E-value=23 Score=21.44 Aligned_cols=39 Identities=21% Similarity=0.247 Sum_probs=26.2
Q ss_pred HHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcC
Q 048223 156 KLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMG 200 (286)
Q Consensus 156 ~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g 200 (286)
.|+.|.++||+++...+.+.. .....++.-++||...+.
T Consensus 12 ~l~~L~~MGF~~~~a~~AL~~------t~n~~~e~A~~Wl~~h~~ 50 (64)
T d1whca_ 12 ALESLIEMGFPRGRAEKALAL------TGNQGIEAAMDWLMEHED 50 (64)
T ss_dssp HHHHHHTTTCCHHHHHHHHHH------HTSCCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHHHHH------hCCCCHHHHHHHHHHCCC
Confidence 456677888888887776541 122357788888887664
No 28
>d2af7a1 a.152.1.2 (A:1-119) Gamma-carboxymuconolactone decarboxylase, CMD {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=27.18 E-value=62 Score=21.75 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHHHHHcCCCHHHHHHHhh
Q 048223 148 MSESQWESKLHVYKKWGWSEQEWLAAFL 175 (286)
Q Consensus 148 ~~~~~l~~~v~~l~~lG~s~~~i~~~i~ 175 (286)
..+..+..-++-....|+|++||..++.
T Consensus 68 g~~~~l~~H~~~Al~~G~t~eEi~e~~~ 95 (119)
T d2af7a1 68 RADDQLKSHVRGALNAGCSKDEIIEVMI 95 (119)
T ss_dssp TCHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 3566788888888899999999998875
No 29
>d1jmxa1 a.3.1.7 (A:2-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Probab=26.80 E-value=37 Score=21.60 Aligned_cols=30 Identities=13% Similarity=0.269 Sum_probs=22.1
Q ss_pred ccHHHHHHHHHHHHhhcCCChHHHhhCCCc
Q 048223 183 TSEDKITAIMDFFVNGMGWEPAVIAKHPAL 212 (286)
Q Consensus 183 ~s~~~l~~k~~fl~~~~g~~~~~i~~~P~~ 212 (286)
++.+....-++||.+..|..+.+-.-.+.+
T Consensus 51 l~~~e~~~Iv~YLa~~yG~~p~e~~~~r~~ 80 (84)
T d1jmxa1 51 ISDDDRRTLVKYLADKQGLAPSETDGVRYA 80 (84)
T ss_dssp CCHHHHHHHHHHHHHHTCCCGGGSTTCTTT
T ss_pred CCHHHHHHHHHHHHHHcCCCcccccccccc
Confidence 466677778899999999988876544333
No 30
>d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.36 E-value=38 Score=19.65 Aligned_cols=15 Identities=13% Similarity=0.093 Sum_probs=8.1
Q ss_pred HHHHHcCCCCcchHH
Q 048223 124 ASVKEMGINPLRLKF 138 (286)
Q Consensus 124 ~~l~~lG~~~~~~~~ 138 (286)
+||.++|++.-...|
T Consensus 4 ~wL~~lgL~~Y~~~F 18 (57)
T d1dxsa_ 4 SFLTGLGCPNCIEYF 18 (57)
T ss_dssp HHHHHTTCTTSHHHH
T ss_pred HHHHHCCcHHHHHHH
Confidence 466666666543333
No 31
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.26 E-value=36 Score=21.73 Aligned_cols=39 Identities=18% Similarity=0.250 Sum_probs=21.7
Q ss_pred HHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcC
Q 048223 156 KLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMG 200 (286)
Q Consensus 156 ~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g 200 (286)
.|+.|.++||++....+.+. ......+..-++||.+.++
T Consensus 32 ~v~~L~~MGF~~~~a~~AL~------~t~n~~~e~A~~Wl~~h~~ 70 (84)
T d1veka_ 32 IVAQLVSMGFSQLHCQKAAI------NTSNAGVEEAMNWLLSHMD 70 (84)
T ss_dssp HHHHHHHHTCCHHHHHHHHH------HTTTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCHHHHHHHHH------HHcCCCHHHHHHHHHHcCC
Confidence 34556677777766655432 1112356666777766543
No 32
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=26.11 E-value=77 Score=20.58 Aligned_cols=19 Identities=26% Similarity=0.302 Sum_probs=12.4
Q ss_pred cCCHHHHHHHHHHHHHcCC
Q 048223 147 IMSESQWESKLHVYKKWGW 165 (286)
Q Consensus 147 ~~~~~~l~~~v~~l~~lG~ 165 (286)
..+..++...++-|.+.|+
T Consensus 45 ~i~~~~v~~~l~~L~~~Gl 63 (109)
T d1sfxa_ 45 DLSARFVRDRLKVLLKRGF 63 (109)
T ss_dssp TCCHHHHHHHHHHHHHTTS
T ss_pred CCCcchHHHHHHHHHhCCC
Confidence 3455666667777777776
No 33
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.98 E-value=25 Score=20.28 Aligned_cols=36 Identities=17% Similarity=0.266 Sum_probs=24.1
Q ss_pred HHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHh
Q 048223 156 KLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVN 197 (286)
Q Consensus 156 ~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~ 197 (286)
.|+.|.++||+.+...+.+.. .....++.-++||.+
T Consensus 15 ~l~~L~~MGF~~~~a~~AL~~------t~n~~ve~A~~WLl~ 50 (51)
T d2cpwa1 15 ALDVLLSMGFPRARAQKALAS------TGGRSVQTACDWLFS 50 (51)
T ss_dssp HHHHHHHHTCCHHHHHHHHHH------TTTSCHHHHHHHHHS
T ss_pred HHHHHHHcCCCHHHHHHHHHH------HCCCCHHHHHHHHHc
Confidence 367788999999988876642 122356677777653
No 34
>d1pbya1 a.3.1.7 (A:1-85) Quinohemoprotein amine dehydrogenase A chain, domains 1 and 2 {Paracoccus denitrificans [TaxId: 266]}
Probab=24.21 E-value=52 Score=20.88 Aligned_cols=24 Identities=17% Similarity=0.171 Sum_probs=19.1
Q ss_pred ccHHHHHHHHHHHHhhcCCChHHH
Q 048223 183 TSEDKITAIMDFFVNGMGWEPAVI 206 (286)
Q Consensus 183 ~s~~~l~~k~~fl~~~~g~~~~~i 206 (286)
++.+....-++||.+..|..+++-
T Consensus 51 l~~~e~~~Iv~YLa~~yG~~p~e~ 74 (85)
T d1pbya1 51 LEPEERAAIVRHLSDTRGLSLAET 74 (85)
T ss_dssp CCHHHHHHHHHHHHHHSCCCSGGG
T ss_pred CCHHHHHHHHHHHHHHcCCCcccc
Confidence 466777788899999999887764
No 35
>d1tc3c_ a.4.1.2 (C:) Transposase tc3a1-65 {Caenorhabditis elegans [TaxId: 6239]}
Probab=23.95 E-value=47 Score=18.75 Aligned_cols=24 Identities=21% Similarity=0.149 Sum_probs=20.3
Q ss_pred HHHHHHHHHcCCCHHHHHHHhhcC
Q 048223 154 ESKLHVYKKWGWSEQEWLAAFLKC 177 (286)
Q Consensus 154 ~~~v~~l~~lG~s~~~i~~~i~~~ 177 (286)
+.+++.++.+|+|-.++.+.+.+.
T Consensus 11 ~aqlDVm~~L~~slhemaR~i~rS 34 (51)
T d1tc3c_ 11 RAQLDVMKLLNVSLHEMSRKISRS 34 (51)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCC
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHh
Confidence 578899999999999998877654
No 36
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.24 E-value=11 Score=20.81 Aligned_cols=12 Identities=17% Similarity=0.429 Sum_probs=5.7
Q ss_pred HHHHHHHcCCCC
Q 048223 122 NVASVKEMGINP 133 (286)
Q Consensus 122 ~v~~l~~lG~~~ 133 (286)
-++-|+++||..
T Consensus 5 QL~~L~~MGF~d 16 (41)
T d2daha1 5 QLEQLRSMGFLN 16 (41)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHHHHHcCCCC
Confidence 344455555544
No 37
>d1z3ea1 c.47.1.12 (A:1-114) Regulatory protein Spx {Bacillus subtilis [TaxId: 1423]}
Probab=23.18 E-value=45 Score=22.21 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=45.4
Q ss_pred cHHHHHHHHhhCCC------------ChhhHHHHHhhCC----CceeccccCcchhHHHHhHhh-----hcCchHHHHHH
Q 048223 11 TLLRKLEFFHCEGI------------SNPDTVKILSKYP----GLLSRSLDNHLIPTFNSLSHL-----LHSSEKTIALI 69 (286)
Q Consensus 11 ~l~~~l~fL~~~G~------------~~~~i~~i~~~~P----~il~~~~~~~l~~~~~~L~~~-----g~~~~~i~~ii 69 (286)
.-+..++||.+.|+ +.+++..++...- .++..+ =..++++ ..+.+++..++
T Consensus 12 ~~rka~~~L~~~~i~~~~~d~~~~p~s~~eL~~ll~~~~~~~~~lin~~--------~~~~k~l~~~~~~ls~~~~i~ll 83 (114)
T d1z3ea1 12 SCRKARAWLEEHEIPFVERNIFSEPLSIDEIKQILRMTEDGTDEIISTR--------SKVFQKLNVNVESMPLQDLYRLI 83 (114)
T ss_dssp HHHHHHHHHHHTTCCEEEEETTTSCCCHHHHHHHHHTCSSCGGGTBCTT--------SHHHHHHCCCGGGSBHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCeEEEeeeccCCCHHHHHHHHHHhccCHHHHHHhc--------CchhhhcccchhhhhhHHHHHHH
Confidence 45566777777664 5566666665421 133321 1122222 34667888888
Q ss_pred HhCCcccccCcchhhhhHHHHHHhcCCCchhHhhh
Q 048223 70 IRFPYILYHDADYYLLPNVKILRDSGVPESDIIKS 104 (286)
Q Consensus 70 ~~~P~iL~~s~e~~l~~~v~~L~~~G~~~~~i~~~ 104 (286)
.++|.++...+-. ... -.-+|++++++..+
T Consensus 84 ~~~P~LikRPI~~--~~~---~~~iG~~~e~~~~~ 113 (114)
T d1z3ea1 84 NEHPGLLRRPIII--DEK---RLQVGYNEDEIRRF 113 (114)
T ss_dssp HHCGGGBCSCEEE--CSS---CEEESCCTTGGGGG
T ss_pred HhChhheeCCEEE--ECC---EEEEcCCHHHHHHh
Confidence 8888888877532 111 00157777766554
No 38
>d1g8ma1 c.24.1.3 (A:4-200) IMP cyclohydrolase domain of bifunctional purine biosynthesis enzyme ATIC {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=22.92 E-value=12 Score=28.33 Aligned_cols=37 Identities=24% Similarity=0.433 Sum_probs=32.1
Q ss_pred hHHHHHHhcCCCchhHhhhhccCCeeEEecchhHHHHH
Q 048223 86 PNVKILRDSGVPESDIIKSIESWPKLFLRHPKFFEKNV 123 (286)
Q Consensus 86 ~~v~~L~~~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v 123 (286)
.+..+|++.|++-.+|.++ +.+|.++..++.++-|++
T Consensus 34 GTak~L~~~gi~v~~Vs~~-tg~peil~GRVKTLhPkI 70 (197)
T d1g8ma1 34 GTATALRDAGLPVRDVSDL-TGFPEMLGGRVKTLHPAV 70 (197)
T ss_dssp HHHHHHHHTTCCCEEHHHH-HSCCCBGGGTBSSCSHHH
T ss_pred HHHHHHHHhcccHHHHHhh-hcCHHHHHHHHhhcccee
Confidence 4678999999999999995 699999998888777775
No 39
>d1j9ba_ c.47.1.12 (A:) Arsenate reductase ArsC {Escherichia coli [TaxId: 562]}
Probab=22.86 E-value=30 Score=24.16 Aligned_cols=88 Identities=16% Similarity=0.244 Sum_probs=51.0
Q ss_pred cHHHHHHHHhhCC------------CChhhHHHHHhhCCC----ceeccccCcchhHHHH--hHhhhcCchHHHHHHHhC
Q 048223 11 TLLRKLEFFHCEG------------ISNPDTVKILSKYPG----LLSRSLDNHLIPTFNS--LSHLLHSSEKTIALIIRF 72 (286)
Q Consensus 11 ~l~~~l~fL~~~G------------~~~~~i~~i~~~~P~----il~~~~~~~l~~~~~~--L~~~g~~~~~i~~ii~~~ 72 (286)
+-+..++||++.| ++.+++..++..... ++..+ + +.+.- +..-.++++++..++.++
T Consensus 12 ~srkal~~L~~~~i~~~~idy~k~pls~~eL~~ll~~lg~~~~~Li~~~-~----~~~k~l~l~~~~ls~~e~i~ll~~~ 86 (138)
T d1j9ba_ 12 TSRNTLEMIRNSGTEPTIILYLENPPSRDELVKLIADMGISVRALLRKN-V----EPYEQLGLAEDKFTDDQLIDFMLQH 86 (138)
T ss_dssp HHHHHHHHHHHTTCCCEEECTTTSCCCHHHHHHHHHHHTSCHHHHBCCS-S----HHHHHTTTTSSCCCHHHHHHHHHHS
T ss_pred HHHHHHHHHHHCCCCeEEEeeccCCCCHHHHHHHHHHccCCHHHHHHcc-C----chhhhcCCCcccCCHHHHHHHHHhC
Confidence 3455667777666 566777777765431 33321 1 11111 112235778888999999
Q ss_pred CcccccCcchhhhhHHHHHHhcCCCchhHhhhhccC
Q 048223 73 PYILYHDADYYLLPNVKILRDSGVPESDIIKSIESW 108 (286)
Q Consensus 73 P~iL~~s~e~~l~~~v~~L~~~G~~~~~i~~~i~~~ 108 (286)
|.++...+-. ...- .-+|.+++.|..++...
T Consensus 87 P~LikRPIvv--~~~~---a~Igrppe~il~~l~~~ 117 (138)
T d1j9ba_ 87 PILINRPIVV--TPLG---TRLCRPSEVVLDILQDA 117 (138)
T ss_dssp GGGBCSCEEE--ETTE---EEECSSGGGGGGTCSSC
T ss_pred chhEecCEEE--ECCE---EEEeCCHHHHHHhCcch
Confidence 9999888621 1110 01788888888877543
No 40
>d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.64 E-value=68 Score=18.45 Aligned_cols=17 Identities=18% Similarity=0.262 Sum_probs=10.2
Q ss_pred HHHHHcCCCCcchHHHH
Q 048223 124 ASVKEMGINPLRLKFVL 140 (286)
Q Consensus 124 ~~l~~lG~~~~~~~~~~ 140 (286)
+||.++|++.-...|..
T Consensus 5 ~wL~~lgL~~Y~~~F~~ 21 (60)
T d1ow5a_ 5 LFLEEIGCTQYLDSFIQ 21 (60)
T ss_dssp HHHHHHSCTHHHHHHHH
T ss_pred HHHHHCcCHHHHHHHHH
Confidence 46777777754444443
No 41
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.22 E-value=52 Score=21.25 Aligned_cols=21 Identities=10% Similarity=0.007 Sum_probs=16.6
Q ss_pred HHHHcCCCHHHHHHHhhcCCc
Q 048223 159 VYKKWGWSEQEWLAAFLKCPW 179 (286)
Q Consensus 159 ~l~~lG~s~~~i~~~i~~~P~ 179 (286)
+-+.||++..+|..|-..+|.
T Consensus 27 La~~Lgl~~~~I~~I~~~~~~ 47 (103)
T d2gf5a1 27 LARQLKVSDTKIDSIEDRYPR 47 (103)
T ss_dssp HHHHTTCCHHHHHHHHHHSSS
T ss_pred HHHHcCCCHHHHHHHHHHcCC
Confidence 335789999999998777774
No 42
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=22.03 E-value=33 Score=22.20 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=13.7
Q ss_pred HHHcCCCHHHHHHHhh
Q 048223 160 YKKWGWSEQEWLAAFL 175 (286)
Q Consensus 160 l~~lG~s~~~i~~~i~ 175 (286)
.+.+|||-+||..++.
T Consensus 12 ar~lGFsL~EI~~ll~ 27 (94)
T d1q08a_ 12 ARQLGFSLESIRELLS 27 (94)
T ss_dssp HHHTTCCHHHHHHHHH
T ss_pred HHHCCCCHHHHHHHHH
Confidence 3489999999999986
No 43
>d1a9xa1 a.92.1.1 (A:403-555) Carbamoyl phosphate synthetase, large subunit connection domain {Escherichia coli [TaxId: 562]}
Probab=21.72 E-value=54 Score=23.29 Aligned_cols=59 Identities=17% Similarity=0.241 Sum_probs=36.9
Q ss_pred cCCCchhHhhhhccCCeeEEecchhHHHHH---HHHHHcCCCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCHHHH
Q 048223 94 SGVPESDIIKSIESWPKLFLRHPKFFEKNV---ASVKEMGINPLRLKFVLAIQAKCIMSESQWESKLHVYKKWGWSEQEW 170 (286)
Q Consensus 94 ~G~~~~~i~~~i~~~P~ll~~~~~~l~~~v---~~l~~lG~~~~~~~~~~~~~~l~~~~~~~l~~~v~~l~~lG~s~~~i 170 (286)
.|++-++|..+-.-.|+.|. +++..+ ..+++.|.+. .+. +.+...+++|||..+|
T Consensus 43 ~G~sveeI~elTkID~WFL~----qi~~Iv~~E~~l~~~~~~~--------------l~~----~~l~~aK~~GFSD~~i 100 (153)
T d1a9xa1 43 AGLSVDGVFNLTNIDRWFLV----QIEELVRLEEKVAEVGITG--------------LNA----DFLRQLKRKGFADARL 100 (153)
T ss_dssp TTBCHHHHHHHHCCCHHHHH----HHHHHHHHHHHHHHHTGGG--------------CCH----HHHHHHHHTTCCHHHH
T ss_pred cCCCHHHHHHhhCeeeHHHH----HHHHHHHHHhhhhhcCccc--------------CCH----HHHHHHHHcCCCHHHH
Confidence 68999999888777777664 344433 2233443322 111 2244567999999999
Q ss_pred HHHh
Q 048223 171 LAAF 174 (286)
Q Consensus 171 ~~~i 174 (286)
+.+.
T Consensus 101 a~l~ 104 (153)
T d1a9xa1 101 AKLA 104 (153)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8764
No 44
>d1dzfa1 c.52.3.1 (A:5-143) Eukaryotic RPB5 N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.71 E-value=30 Score=24.37 Aligned_cols=35 Identities=14% Similarity=0.229 Sum_probs=27.1
Q ss_pred chHHHHHHHHHHCCCCCCCccccccccccChhhHHHHhcC
Q 048223 222 IPRGAVIQFLLSKGLVKSDTTYLTTLLSYPEKTFMLRLMN 261 (286)
Q Consensus 222 ~pR~~vl~~L~~~G~~~~~~~~l~~~l~~se~~F~~~~~~ 261 (286)
+-|-.+++.|..+|+. ++ ..-+.+|-++|.++|..
T Consensus 10 r~rrTv~EMl~DRGY~---V~--~~el~~s~~~F~~~~~~ 44 (139)
T d1dzfa1 10 RAFRTVKEMVKDRGYF---IT--QEEVELPLEDFKAKYCD 44 (139)
T ss_dssp HHHHHHHHHHHHTTBC---CC--HHHHTCCHHHHHHHHBC
T ss_pred HHHHHHHHHHhcCCCc---CC--HHHHcCCHHHHHHHHcc
Confidence 3466789999999994 33 45678888999999965
No 45
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=21.59 E-value=45 Score=22.17 Aligned_cols=21 Identities=19% Similarity=-0.023 Sum_probs=14.4
Q ss_pred HHHHHHHHcCCCHHHHHHHhh
Q 048223 155 SKLHVYKKWGWSEQEWLAAFL 175 (286)
Q Consensus 155 ~~v~~l~~lG~s~~~i~~~i~ 175 (286)
..|.+++++||+-++|..++.
T Consensus 52 ~~I~~lr~~g~sl~eIk~~l~ 72 (118)
T d1r8ea1 52 DLIKSLKYIGTPLEEMKKAQD 72 (118)
T ss_dssp HHHHHHHHTTCCHHHHHHHTT
T ss_pred HHHHHHHHcCCCHHHHHHHHc
Confidence 445667777777777777654
No 46
>d1k6ya1 a.4.10.1 (A:1-46) N-terminal Zn binding domain of HIV integrase {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=20.99 E-value=25 Score=19.85 Aligned_cols=26 Identities=12% Similarity=0.182 Sum_probs=20.7
Q ss_pred HHHHHHH-HcCCCHHHHHHHhhcCCcc
Q 048223 155 SKLHVYK-KWGWSEQEWLAAFLKCPWC 180 (286)
Q Consensus 155 ~~v~~l~-~lG~s~~~i~~~i~~~P~i 180 (286)
.+...|. ++|++......|+..||..
T Consensus 17 ~n~~~L~~~F~ip~~vAr~IV~~C~~C 43 (46)
T d1k6ya1 17 SNWRAMASDFNLPPVVAKEIVASCDKC 43 (46)
T ss_dssp CCHHHHHHHHTCCHHHHHHHHHHCTTC
T ss_pred cCHHHHHHHcCCCHHHHHHHHHHHHHh
Confidence 3445555 7899999999999999864
No 47
>d1yira2 d.41.2.2 (A:4-144) Nicotinate phosphoribosyltransferase, N-terminal domain {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.25 E-value=95 Score=21.59 Aligned_cols=46 Identities=13% Similarity=0.268 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHhhcCCccccccHHHHHHHHHHHHhhcCCChHHH
Q 048223 152 QWESKLHVYKKWGWSEQEWLAAFLKCPWCMITSEDKITAIMDFFVNGMGWEPAVI 206 (286)
Q Consensus 152 ~l~~~v~~l~~lG~s~~~i~~~i~~~P~il~~s~~~l~~k~~fl~~~~g~~~~~i 206 (286)
.+++.++++..+.|+.+|+.-+ +.+|. ++.+ =++||.. +.++++.+
T Consensus 54 gl~~~i~~l~~lrFt~eei~yL-~~~~~---f~~~----fldyL~~-frf~~~~~ 99 (141)
T d1yira2 54 AIREQLEYLAGLAISDEQLAFL-ERIPF---LAPD----FIRFLGL-FRFNPRYV 99 (141)
T ss_dssp HHHHHHHHHHHCCCCHHHHHHH-HTSTT---SCHH----HHHHHHH-CCCCGGGE
T ss_pred HHHHHHHHHHhCCCCHHHHHHH-HcCCC---CCHH----HHHHHHh-CCCCceEE
Confidence 4677889999999999998766 55664 2433 4578877 88877643
Done!