Query         048228
Match_columns 629
No_of_seqs    687 out of 4050
Neff          8.9 
Searched_HMMs 46136
Date          Fri Mar 29 07:37:56 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048228hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02876 ankyrin repeat protei 100.0 2.6E-51 5.5E-56  468.8  34.7  363   17-451    39-485 (682)
  2 PHA02876 ankyrin repeat protei 100.0   3E-47 6.5E-52  435.2  35.3  336   19-424   145-484 (682)
  3 PHA02946 ankyin-like protein;  100.0 2.1E-46 4.6E-51  403.7  31.9  316   20-408    38-380 (446)
  4 PHA02730 ankyrin-like protein; 100.0   4E-46 8.6E-51  405.2  32.4  356   16-424    38-504 (672)
  5 PHA02946 ankyin-like protein;  100.0 6.1E-46 1.3E-50  400.1  33.4  326   21-425    11-364 (446)
  6 PHA02917 ankyrin-like protein; 100.0 3.5E-45 7.7E-50  408.5  33.9  396   16-451    29-494 (661)
  7 PHA02716 CPXV016; CPX019; EVM0 100.0   5E-45 1.1E-49  404.1  32.2  335   28-412   151-569 (764)
  8 PHA02874 ankyrin repeat protei 100.0 1.4E-43   3E-48  384.1  32.9  316   21-416     3-322 (434)
  9 KOG0510 Ankyrin repeat protein 100.0 2.5E-44 5.4E-49  380.9  22.6  334   16-423    58-417 (929)
 10 PHA02716 CPXV016; CPX019; EVM0 100.0 3.4E-43 7.3E-48  389.6  30.3  331   16-410   174-594 (764)
 11 PHA02730 ankyrin-like protein; 100.0 2.3E-42 5.1E-47  375.8  33.2  371   32-451    20-505 (672)
 12 KOG0510 Ankyrin repeat protein 100.0 1.2E-43 2.6E-48  375.7  22.3  307   16-379    85-416 (929)
 13 PHA03095 ankyrin-like protein; 100.0 3.8E-43 8.2E-48  385.6  25.3  295   24-374    19-324 (471)
 14 PHA03095 ankyrin-like protein; 100.0 1.5E-42 3.3E-47  380.8  27.6  290   69-413    19-320 (471)
 15 PHA02874 ankyrin repeat protei 100.0 9.6E-42 2.1E-46  369.8  31.3  291   67-424     4-296 (434)
 16 PHA02917 ankyrin-like protein; 100.0 1.2E-41 2.7E-46  380.0  31.0  343   16-424    65-493 (661)
 17 KOG4177 Ankyrin [Cell wall/mem 100.0 3.6E-43 7.9E-48  395.1  18.1  385   16-450   239-652 (1143)
 18 KOG4177 Ankyrin [Cell wall/mem 100.0 3.7E-42   8E-47  387.0  23.2  386   16-453   206-617 (1143)
 19 PHA03100 ankyrin repeat protei 100.0   4E-41 8.7E-46  370.4  26.0  280   77-413    15-313 (480)
 20 PHA03100 ankyrin repeat protei 100.0 2.7E-40 5.8E-45  363.9  26.3  283   29-370    12-313 (480)
 21 PHA02878 ankyrin repeat protei 100.0 8.6E-40 1.9E-44  358.6  29.4  295   62-417    35-340 (477)
 22 PHA02878 ankyrin repeat protei 100.0   5E-40 1.1E-44  360.5  26.0  307   16-382    34-348 (477)
 23 PHA02989 ankyrin repeat protei 100.0 1.4E-38   3E-43  350.2  29.2  282   75-410    14-316 (494)
 24 PHA02989 ankyrin repeat protei 100.0 1.1E-38 2.3E-43  351.1  27.3  283   29-365    13-314 (494)
 25 PHA02791 ankyrin-like protein; 100.0 6.2E-38 1.3E-42  315.6  22.9  235  111-411     9-248 (284)
 26 PHA02792 ankyrin-like protein; 100.0 5.6E-38 1.2E-42  338.0  23.6  348   21-410     5-480 (631)
 27 KOG0508 Ankyrin repeat protein 100.0 7.5E-38 1.6E-42  313.0  17.8  189   18-237    41-230 (615)
 28 PHA02875 ankyrin repeat protei 100.0 1.1E-36 2.4E-41  328.4  26.7  241  101-383     2-248 (413)
 29 PHA02798 ankyrin-like protein; 100.0 2.2E-36 4.9E-41  332.3  26.0  289   31-373    17-324 (489)
 30 PHA02798 ankyrin-like protein; 100.0 2.1E-36 4.5E-41  332.5  24.6  283   76-413    17-321 (489)
 31 PHA02791 ankyrin-like protein; 100.0 9.8E-36 2.1E-40  299.7  23.4  235   30-367    10-247 (284)
 32 PHA02875 ankyrin repeat protei 100.0 1.5E-35 3.3E-40  319.6  26.6  242   19-345     2-247 (413)
 33 KOG4412 26S proteasome regulat 100.0 3.7E-36   8E-41  265.8  12.1  205  188-423     3-211 (226)
 34 KOG4412 26S proteasome regulat 100.0 1.1E-35 2.3E-40  263.0  11.9  205  101-344     3-212 (226)
 35 PHA02792 ankyrin-like protein; 100.0 8.2E-34 1.8E-38  305.9  24.4  315   66-425     5-452 (631)
 36 KOG0508 Ankyrin repeat protein 100.0 3.1E-34 6.8E-39  287.2  18.6  221   25-285    10-237 (615)
 37 KOG0509 Ankyrin repeat and DHH 100.0 1.5E-31 3.2E-36  279.8  15.0  208  101-346    44-255 (600)
 38 KOG0509 Ankyrin repeat and DHH 100.0   2E-31 4.4E-36  278.8  14.1  207  136-383    45-255 (600)
 39 KOG4369 RTK signaling protein  100.0 4.4E-30 9.4E-35  277.1  13.5  319   20-404   758-1081(2131)
 40 PHA02795 ankyrin-like protein; 100.0 2.7E-28 5.9E-33  254.6  21.5  244   78-410    63-317 (437)
 41 PHA02859 ankyrin repeat protei 100.0 5.4E-28 1.2E-32  234.8  17.2  177  186-384    19-203 (209)
 42 PHA02795 ankyrin-like protein; 100.0 6.2E-28 1.3E-32  251.9  18.4  217  151-416    64-295 (437)
 43 KOG4369 RTK signaling protein   99.9 1.7E-28 3.7E-33  264.9   8.9  310   57-421   750-1065(2131)
 44 PHA02859 ankyrin repeat protei  99.9 1.8E-26 3.9E-31  224.2  20.6  175   19-233    21-203 (209)
 45 KOG0502 Integral membrane anky  99.9 1.9E-26 4.1E-31  210.2   4.6  236   98-378    59-296 (296)
 46 KOG0502 Integral membrane anky  99.9 2.8E-26 6.1E-31  209.1   5.6  266  101-421    31-296 (296)
 47 TIGR00870 trp transient-recept  99.9 9.1E-25   2E-29  252.2  19.0  290   63-408    16-323 (743)
 48 TIGR00870 trp transient-recept  99.9   1E-24 2.2E-29  251.8  15.8  254  100-423    16-297 (743)
 49 KOG0507 CASK-interacting adapt  99.9 1.1E-24 2.3E-29  230.7  14.2  241  105-384     7-265 (854)
 50 PLN03192 Voltage-dependent pot  99.9 5.8E-24 1.3E-28  246.9  18.6  172  187-382   524-698 (823)
 51 PLN03192 Voltage-dependent pot  99.9 1.9E-23 4.1E-28  242.6  18.4  197  198-430   504-703 (823)
 52 KOG0507 CASK-interacting adapt  99.9 1.1E-23 2.3E-28  223.1  14.5  242   67-348     6-266 (854)
 53 KOG0505 Myosin phosphatase, re  99.9 1.6E-23 3.4E-28  215.2  10.5  232  104-383    43-274 (527)
 54 PHA02743 Viral ankyrin protein  99.9 3.6E-22 7.9E-27  186.7  13.0  146  242-418     9-163 (166)
 55 KOG0505 Myosin phosphatase, re  99.9   2E-22 4.4E-27  207.1  11.8  234   64-346    40-274 (527)
 56 KOG0514 Ankyrin repeat protein  99.9   1E-21 2.3E-26  191.9  10.8  152  181-350   261-421 (452)
 57 KOG0514 Ankyrin repeat protein  99.9   8E-22 1.7E-26  192.7   8.4  162  217-405   263-429 (452)
 58 PHA02743 Viral ankyrin protein  99.8 3.7E-21 8.1E-26  179.9  10.7  147  210-374     9-162 (166)
 59 PHA02741 hypothetical protein;  99.8 1.5E-20 3.3E-25  176.5  12.4  139  245-409    13-158 (169)
 60 PHA02884 ankyrin repeat protei  99.8 5.4E-20 1.2E-24  185.4  13.1  117  131-262    28-146 (300)
 61 PHA02736 Viral ankyrin protein  99.8 2.8E-20   6E-25  172.1   9.3  138  245-410     9-153 (154)
 62 PHA02736 Viral ankyrin protein  99.8 3.9E-20 8.5E-25  171.2   8.0  102  246-367    48-153 (154)
 63 KOG0512 Fetal globin-inducing   99.8 1.9E-19   4E-24  158.9  11.4  138  104-262    66-207 (228)
 64 PHA02741 hypothetical protein;  99.8 1.4E-19   3E-24  170.0  11.3  129  218-366    17-158 (169)
 65 PHA02884 ankyrin repeat protei  99.8 8.2E-19 1.8E-23  176.9  16.1  152   20-212    34-186 (300)
 66 KOG0195 Integrin-linked kinase  99.8 1.9E-18   4E-23  164.0   9.4  143  238-411    19-161 (448)
 67 KOG0512 Fetal globin-inducing   99.7 7.6E-18 1.6E-22  148.7  10.6  143  190-347    65-209 (228)
 68 KOG3676 Ca2+-permeable cation   99.7   9E-17   2E-21  173.4  14.0  226   93-362    93-330 (782)
 69 KOG0195 Integrin-linked kinase  99.7 4.8E-18   1E-22  161.3   2.9  132  217-369    29-162 (448)
 70 PF12796 Ank_2:  Ankyrin repeat  99.7 2.6E-16 5.6E-21  131.1   9.8   89  305-413     1-89  (89)
 71 KOG3676 Ca2+-permeable cation   99.7 1.5E-16 3.3E-21  171.6  10.3  185  189-405   102-330 (782)
 72 PF12796 Ank_2:  Ankyrin repeat  99.7 2.5E-16 5.5E-21  131.1   9.0   89  257-370     1-89  (89)
 73 cd00204 ANK ankyrin repeats;    99.6 1.7E-15 3.7E-20  133.7  12.8  125  248-403     2-126 (126)
 74 cd00204 ANK ankyrin repeats;    99.6 4.8E-14   1E-18  124.3  14.1  121   18-156     6-126 (126)
 75 KOG4214 Myotrophin and similar  99.5 3.2E-14 6.8E-19  112.7   7.1  101  304-421     5-105 (117)
 76 KOG4214 Myotrophin and similar  99.5 2.2E-13 4.8E-18  108.0   9.9  100   21-138     4-103 (117)
 77 COG0666 Arp FOG: Ankyrin repea  99.5 4.7E-13   1E-17  131.1  14.5  132  244-406    64-203 (235)
 78 COG0666 Arp FOG: Ankyrin repea  99.4 5.4E-13 1.2E-17  130.6  11.7  130  218-363    69-203 (235)
 79 PTZ00322 6-phosphofructo-2-kin  99.4 3.6E-12 7.8E-17  144.4  13.7  106  303-424    84-196 (664)
 80 PF13857 Ank_5:  Ankyrin repeat  99.3 5.6E-13 1.2E-17  100.1   3.2   49  293-343     8-56  (56)
 81 PF13857 Ank_5:  Ankyrin repeat  99.3   1E-12 2.2E-17   98.7   4.4   55  321-380     1-56  (56)
 82 PTZ00322 6-phosphofructo-2-kin  99.3 2.8E-12   6E-17  145.3   9.6  106  255-381    84-196 (664)
 83 KOG0515 p53-interacting protei  99.3 4.5E-12 9.8E-17  129.9   7.6  112  273-403   560-672 (752)
 84 KOG1710 MYND Zn-finger and ank  99.3 2.3E-11 5.1E-16  116.2  11.0  124   63-210    11-134 (396)
 85 PF13637 Ank_4:  Ankyrin repeat  99.3   5E-12 1.1E-16   94.3   5.1   54  301-360     1-54  (54)
 86 KOG1710 MYND Zn-finger and ank  99.2 3.6E-11 7.9E-16  114.9  10.5  111  253-384    12-123 (396)
 87 KOG0515 p53-interacting protei  99.2   6E-11 1.3E-15  121.7   9.2  119   23-157   554-673 (752)
 88 PF13637 Ank_4:  Ankyrin repeat  99.2 8.4E-11 1.8E-15   87.7   6.4   54  101-156     1-54  (54)
 89 PF13606 Ank_3:  Ankyrin repeat  98.8 7.7E-09 1.7E-13   66.3   3.7   29   18-46      1-29  (30)
 90 KOG0783 Uncharacterized conser  98.7   7E-09 1.5E-13  112.0   2.8   83  294-382    45-128 (1267)
 91 KOG0783 Uncharacterized conser  98.6 4.1E-08   9E-13  106.2   5.4   87  245-348    44-131 (1267)
 92 PF13606 Ank_3:  Ankyrin repeat  98.5 7.2E-08 1.6E-12   61.8   3.4   29  300-330     1-29  (30)
 93 PF00023 Ank:  Ankyrin repeat H  98.5 1.2E-07 2.6E-12   62.5   4.0   32  300-333     1-32  (33)
 94 KOG0818 GTPase-activating prot  98.5 3.2E-07 6.8E-12   94.2   8.5   84  295-384   121-211 (669)
 95 PF00023 Ank:  Ankyrin repeat H  98.5 1.2E-07 2.6E-12   62.6   3.7   30   19-48      2-31  (33)
 96 KOG0818 GTPase-activating prot  98.5 3.8E-07 8.2E-12   93.7   8.6   94  248-358   122-222 (669)
 97 KOG0506 Glutaminase (contains   98.5 7.1E-08 1.5E-12   98.5   3.2   94  251-364   504-597 (622)
 98 KOG0782 Predicted diacylglycer  98.5 3.6E-07 7.7E-12   95.0   8.1  101   90-210   888-989 (1004)
 99 KOG0506 Glutaminase (contains   98.5 2.2E-07 4.8E-12   94.9   6.0   95  297-407   502-597 (622)
100 KOG0705 GTPase-activating prot  98.4 7.1E-07 1.5E-11   93.3   7.5   87  273-366   634-720 (749)
101 KOG0522 Ankyrin repeat protein  98.3   7E-07 1.5E-11   93.1   6.6   58  292-351    46-103 (560)
102 KOG0782 Predicted diacylglycer  98.3 8.1E-07 1.8E-11   92.4   6.8   81  294-380   892-974 (1004)
103 KOG0705 GTPase-activating prot  98.3 2.2E-06 4.8E-11   89.7   8.3   97   67-165   627-723 (749)
104 KOG0522 Ankyrin repeat protein  98.2 2.1E-06 4.5E-11   89.7   7.0   78  303-384    22-99  (560)
105 KOG3609 Receptor-activated Ca2  98.2 5.2E-06 1.1E-10   91.6   8.8  135   63-215    24-158 (822)
106 KOG3609 Receptor-activated Ca2  98.1 1.4E-05   3E-10   88.3   9.5  121   21-163    27-158 (822)
107 KOG0521 Putative GTPase activa  98.0 4.3E-06 9.3E-11   94.9   5.3   81  298-384   653-733 (785)
108 KOG2384 Major histocompatibili  97.9 3.3E-05 7.1E-10   70.4   7.7   74  292-371     3-77  (223)
109 KOG0521 Putative GTPase activa  97.9 2.1E-05 4.6E-10   89.4   6.4   91  243-350   644-736 (785)
110 KOG2384 Major histocompatibili  97.8 5.7E-05 1.2E-09   68.9   6.3   69   91-160     2-70  (223)
111 KOG0511 Ankyrin repeat protein  97.7 7.3E-05 1.6E-09   74.9   7.5   70  302-377    37-106 (516)
112 KOG0520 Uncharacterized conser  97.7  0.0001 2.2E-09   83.4   8.2  123  187-323   573-701 (975)
113 KOG0520 Uncharacterized conser  97.6 6.1E-05 1.3E-09   85.1   5.4  124   18-158   573-702 (975)
114 KOG0511 Ankyrin repeat protein  97.6 0.00019 4.1E-09   72.1   8.1   84   66-158    38-121 (516)
115 smart00248 ANK ankyrin repeats  96.8  0.0019 4.1E-08   39.7   3.8   28   19-46      2-29  (30)
116 smart00248 ANK ankyrin repeats  96.2  0.0074 1.6E-07   36.9   3.6   28  188-215     2-29  (30)
117 KOG2505 Ankyrin repeat protein  95.8  0.0081 1.8E-07   62.9   3.8   63  314-381   403-471 (591)
118 KOG2505 Ankyrin repeat protein  95.7   0.012 2.5E-07   61.7   4.2   70  147-230   402-471 (591)
119 PF06128 Shigella_OspC:  Shigel  95.4    0.11 2.3E-06   49.4   9.3  108  274-408   164-279 (284)
120 PF03158 DUF249:  Multigene fam  93.8    0.68 1.5E-05   42.8  10.2  135   21-209    48-191 (192)
121 PF06128 Shigella_OspC:  Shigel  93.6    0.36 7.9E-06   45.9   8.3  115   21-160   155-278 (284)
122 PF03158 DUF249:  Multigene fam  91.8     1.2 2.5E-05   41.3   8.8  138  136-323    46-191 (192)
123 PF11929 DUF3447:  Domain of un  88.7    0.96 2.1E-05   35.9   5.1   46   21-85      8-53  (76)
124 PLN03218 maturation of RBCL 1;  88.4     6.7 0.00014   47.5  14.0   27  341-367   727-753 (1060)
125 PLN03081 pentatricopeptide (PP  86.6      18 0.00038   42.0  15.9   63  302-365   497-560 (697)
126 PLN03218 maturation of RBCL 1;  86.4      12 0.00026   45.4  14.5  228  103-381   477-729 (1060)
127 PF11929 DUF3447:  Domain of un  83.3     2.3   5E-05   33.7   4.7   45  139-210    10-54  (76)
128 PLN03081 pentatricopeptide (PP  81.5      92   0.002   36.1  19.0   68   90-163   152-223 (697)
129 PLN03077 Protein ECB2; Provisi  81.2      96  0.0021   36.9  19.4   59  102-164   327-389 (857)
130 PLN03077 Protein ECB2; Provisi  73.5      82  0.0018   37.5  15.9   12  399-410   577-588 (857)
131 cd07920 Pumilio Pumilio-family  44.8 1.6E+02  0.0035   30.2  10.1  153  180-348   121-291 (322)
132 KOG1595 CCCH-type Zn-finger pr  43.4     8.1 0.00018   41.7   0.1   96  300-406    57-155 (528)
133 KOG0513 Ca2+-independent phosp  36.1     5.6 0.00012   43.6  -2.5   44  219-262   133-178 (503)
134 KOG1595 CCCH-type Zn-finger pr  34.6      18  0.0004   39.1   1.1   84  335-431    57-141 (528)
135 PF04053 Coatomer_WDAD:  Coatom  26.6 1.3E+02  0.0027   32.8   5.8   49  105-159   325-373 (443)
136 PF01671 ASFV_360:  African swi  25.4   1E+02  0.0023   29.3   4.2   20  107-126    91-110 (215)
137 cd07920 Pumilio Pumilio-family  24.2 7.3E+02   0.016   25.1  11.0   52  182-235   195-250 (322)
138 KOG0513 Ca2+-independent phosp  21.2      24 0.00051   38.8  -1.0   46  189-235   137-182 (503)
139 PF09075 STb_secrete:  Heat-sta  20.1      34 0.00074   22.9  -0.0    6  599-604    35-40  (48)

No 1  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.6e-51  Score=468.77  Aligned_cols=363  Identities=17%  Similarity=0.146  Sum_probs=265.5

Q ss_pred             CCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHH---------------------------
Q 048228           17 WWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFD---------------------------   69 (629)
Q Consensus        17 ~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh---------------------------   69 (629)
                      .++.||||+||..||.|+|+.||+.+++....           .+..|.||||                           
T Consensus        39 ~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~-----------~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~  107 (682)
T PHA02876         39 SIPFTAIHQALQLRQIDIVEEIIQQNPELIYI-----------TDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKY  107 (682)
T ss_pred             cccchHHHHHHHHHhhhHHHHHHHhCcccchh-----------hchhhccccccccCCCCccccccccccchhhcccccH
Confidence            35779999999999999999999998874321           1223444444                           


Q ss_pred             -------------------------------------------HHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHH
Q 048228           70 -------------------------------------------DVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLY  106 (629)
Q Consensus        70 -------------------------------------------~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh  106 (629)
                                                                 .|+..++.+++++|++    .|++++.+|.+|.||||
T Consensus       108 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~----~Gadvn~~d~~G~TpLh  183 (682)
T PHA02876        108 ASIILNKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLE----GGADVNAKDIYCITPIH  183 (682)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHh----CCCCCCCCCCCCCCHHH
Confidence                                                       4456677888999998    99999999999999999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhh
Q 048228          107 TAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWE  186 (629)
Q Consensus       107 ~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~  186 (629)
                      +||..|+.++|++|+++|++ ++..+..|.||||+| +..++.+++++|++++.+++..                     
T Consensus       184 ~Aa~~G~~~iv~~LL~~Gad-~n~~~~~g~t~L~~A-~~~~~~~ivk~Ll~~~~~~~~~---------------------  240 (682)
T PHA02876        184 YAAERGNAKMVNLLLSYGAD-VNIIALDDLSVLECA-VDSKNIDTIKAIIDNRSNINKN---------------------  240 (682)
T ss_pred             HHHHCCCHHHHHHHHHCCCC-cCccCCCCCCHHHHH-HHcCCHHHHHHHHhcCCCCCCC---------------------
Confidence            99999999999999999998 577889999999998 7889999999999988766532                     


Q ss_pred             ccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcc-e--ecccCCCCccccCCCCCchHHHHHhc
Q 048228          187 MMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVE-V--LIAKSPSLISVTNSHGDTFLHMVVAG  263 (629)
Q Consensus       187 ~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~-i--lL~~~gadin~~d~~g~TpLh~A~~~  263 (629)
                        .++|+.|+..++.+++++|++.|++++. .+..|.||||+|+..++.. +  +|.+.|++++..|..|.||||+|+..
T Consensus       241 --~~~L~~ai~~~~~~~~~~Ll~~g~~vn~-~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~  317 (682)
T PHA02876        241 --DLSLLKAIRNEDLETSLLLYDAGFSVNS-IDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKN  317 (682)
T ss_pred             --cHHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh
Confidence              2566777777777777777777777664 6666777777777766643 2  55666677777777777777777763


Q ss_pred             CCCCCcccccc-HHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHH
Q 048228          264 FRSPGFRRVDH-QIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDL  342 (629)
Q Consensus       264 ~~~~~~~~~~~-~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~  342 (629)
                                + ..+++++|+..|     ++++..|..|.||||+|+..+.+.+++++|++ .|+++|.+|..|+||||+
T Consensus       318 ----------g~~~~~v~~Ll~~g-----adin~~d~~g~TpLh~A~~~~~~~~iv~lLl~-~gadin~~d~~G~TpLh~  381 (682)
T PHA02876        318 ----------GYDTENIRTLIMLG-----ADVNAADRLYITPLHQASTLDRNKDIVITLLE-LGANVNARDYCDKTPIHY  381 (682)
T ss_pred             ----------CCCHHHHHHHHHcC-----CCCCCcccCCCcHHHHHHHhCCcHHHHHHHHH-cCCCCccCCCCCCCHHHH
Confidence                      4 466777777766     55677777777777777665436667777776 677777777777777777


Q ss_pred             HHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccCCChhhh
Q 048228          343 LKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASVEY  422 (629)
Q Consensus       343 A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~  422 (629)
                      |+..++.+    ++++|+++|++++..+..|.||||+|+....         ...++++|+++|++++..|..|+||+++
T Consensus       382 Aa~~~~~~----iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~---------~~~~vk~Ll~~gadin~~d~~G~TpLh~  448 (682)
T PHA02876        382 AAVRNNVV----IINTLLDYGADIEALSQKIGTALHFALCGTN---------PYMSVKTLIDRGANVNSKNKDLSTPLHY  448 (682)
T ss_pred             HHHcCCHH----HHHHHHHCCCCccccCCCCCchHHHHHHcCC---------HHHHHHHHHhCCCCCCcCCCCCChHHHH
Confidence            77777665    6777777777777777777777777765432         2456677777777777777777777766


Q ss_pred             hh----------hhccCCCCCCCCCCCCCCCCcHHHHHH
Q 048228          423 SS----------CLSEQSDFDSSNTPDDKKSSPIDYAAR  451 (629)
Q Consensus       423 a~----------~~~e~g~~~d~n~~~~~~~~~~~~aa~  451 (629)
                      |.          .|++.|+  ++|..|..|.+|++.|+.
T Consensus       449 Aa~~~~~~~iv~lLl~~Ga--d~n~~d~~g~tpl~~a~~  485 (682)
T PHA02876        449 ACKKNCKLDVIEMLLDNGA--DVNAINIQNQYPLLIALE  485 (682)
T ss_pred             HHHhCCcHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHH
Confidence            62          2455666  677777777777776664


No 2  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3e-47  Score=435.23  Aligned_cols=336  Identities=17%  Similarity=0.140  Sum_probs=305.5

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccccc
Q 048228           19 YASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRA   98 (629)
Q Consensus        19 g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d   98 (629)
                      ..++|+.|+..|+.+++++|++.|++++.++            ..|.||||+|+..|+.+++++|++    +|++++..+
T Consensus       145 ~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d------------~~G~TpLh~Aa~~G~~~iv~~LL~----~Gad~n~~~  208 (682)
T PHA02876        145 YMKLIKERIQQDELLIAEMLLEGGADVNAKD------------IYCITPIHYAAERGNAKMVNLLLS----YGADVNIIA  208 (682)
T ss_pred             hhHHHHHHHHCCcHHHHHHHHhCCCCCCCCC------------CCCCCHHHHHHHCCCHHHHHHHHH----CCCCcCccC
Confidence            3578999999999999999999999998754            579999999999999999999999    999999999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      ..|.||||+|+..|+.+++++|++.++.. .    .+.++++.| +..++.+++++|++.|++++..             
T Consensus       209 ~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~-~----~~~~~L~~a-i~~~~~~~~~~Ll~~g~~vn~~-------------  269 (682)
T PHA02876        209 LDDLSVLECAVDSKNIDTIKAIIDNRSNI-N----KNDLSLLKA-IRNEDLETSLLLYDAGFSVNSI-------------  269 (682)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHhcCCCC-C----CCcHHHHHH-HHcCCHHHHHHHHHCCCCCCCC-------------
Confidence            99999999999999999999999988763 2    244677776 8889999999999999988754             


Q ss_pred             chhHHhhhccchHHHHHHhcCCH-HHHHHHHhCCCCcccccCCCCCcHHHHHHhcCC-cce--ecccCCCCccccCCCCC
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNL-DILRQLLGDCENVLAYRDVQGSTILHSASGRGQ-VEV--LIAKSPSLISVTNSHGD  254 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~-~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~-~~i--lL~~~gadin~~d~~g~  254 (629)
                            +..|+||||+|+..++. +++++|++.|++++. .|..|.||||+|+..|. .++  +|...|++++..|..|.
T Consensus       270 ------d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~-~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~  342 (682)
T PHA02876        270 ------DDCKNTPLHHASQAPSLSRLVPKLLERGADVNA-KNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYI  342 (682)
T ss_pred             ------CCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCC
Confidence                  34478999999999996 699999999999995 99999999999999995 555  78889999999999999


Q ss_pred             chHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC
Q 048228          255 TFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG  334 (629)
Q Consensus       255 TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~  334 (629)
                      ||||+|+..         .++.+++++|++.|     +++|.+|..|+||||+|+..+ +.+++++|++ .|++++..+.
T Consensus       343 TpLh~A~~~---------~~~~~iv~lLl~~g-----adin~~d~~G~TpLh~Aa~~~-~~~iv~~Ll~-~gad~~~~~~  406 (682)
T PHA02876        343 TPLHQASTL---------DRNKDIVITLLELG-----ANVNARDYCDKTPIHYAAVRN-NVVIINTLLD-YGADIEALSQ  406 (682)
T ss_pred             cHHHHHHHh---------CCcHHHHHHHHHcC-----CCCccCCCCCCCHHHHHHHcC-CHHHHHHHHH-CCCCccccCC
Confidence            999999985         36899999999999     779999999999999999999 9999999999 9999999999


Q ss_pred             CCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccc
Q 048228          335 EGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAI  414 (629)
Q Consensus       335 ~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~  414 (629)
                      .|.||||+|+..++.   ..++++|+++|+++|.+|..|+||||+|+..++         +.+++++|+++|||++..|.
T Consensus       407 ~g~T~Lh~A~~~~~~---~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~---------~~~iv~lLl~~Gad~n~~d~  474 (682)
T PHA02876        407 KIGTALHFALCGTNP---YMSVKTLIDRGANVNSKNKDLSTPLHYACKKNC---------KLDVIEMLLDNGADVNAINI  474 (682)
T ss_pred             CCCchHHHHHHcCCH---HHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCC---------cHHHHHHHHHCCCCCCCCCC
Confidence            999999999987663   237899999999999999999999999998653         47999999999999999999


Q ss_pred             cCCChhhhhh
Q 048228          415 CDAASVEYSS  424 (629)
Q Consensus       415 ~g~t~~~~a~  424 (629)
                      .|.||++++.
T Consensus       475 ~g~tpl~~a~  484 (682)
T PHA02876        475 QNQYPLLIAL  484 (682)
T ss_pred             CCCCHHHHHH
Confidence            9999999874


No 3  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.1e-46  Score=403.70  Aligned_cols=316  Identities=15%  Similarity=0.126  Sum_probs=270.5

Q ss_pred             CcHHHHHHH--CCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccc
Q 048228           20 ASPIDFAAA--NGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIR   97 (629)
Q Consensus        20 ~TpLh~Aa~--~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~   97 (629)
                      .++||.++.  .++.++|++||++|++++.++            .+|.||||+|++.++.+++++|++    +|++++.+
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d------------~~G~TpLh~Aa~~g~~eiv~lLL~----~GAdin~~  101 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPNETD------------DDGNYPLHIASKINNNRIVAMLLT----HGADPNAC  101 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccC------------CCCCCHHHHHHHcCCHHHHHHHHH----CcCCCCCC
Confidence            489998874  457899999999999998754            679999999999999999999999    99999999


Q ss_pred             cCCCChHHHHHHHcCC--HHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhh
Q 048228           98 AGYGGWLLYTAASAGD--VRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEK  175 (629)
Q Consensus        98 d~~g~tpLh~A~~~g~--~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~  175 (629)
                      |..|.||||+|+..++  .+++++|+++|+++....|..|.|||| | +..++.+++++|+++|++++..          
T Consensus       102 d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-a-a~~~~~~vv~~Ll~~gad~~~~----------  169 (446)
T PHA02946        102 DKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-A-CTDPSERVFKKIMSIGFEARIV----------  169 (446)
T ss_pred             CCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-H-HHCCChHHHHHHHhcccccccc----------
Confidence            9999999999998764  899999999999965567899999997 4 4569999999999999988754          


Q ss_pred             hccchhHHhhhccchHHHHHHhcC--CHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC--Ccce--ecccCCCCcccc
Q 048228          176 LSDSYSVFKWEMMNRAVHAVARGG--NLDILRQLLGDCENVLAYRDVQGSTILHSASGRG--QVEV--LIAKSPSLISVT  249 (629)
Q Consensus       176 ~~~~~~~~~d~~g~t~Lh~A~~~g--~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g--~~~i--lL~~~gadin~~  249 (629)
                               |..|+||||+|+..+  +.+++++|+++|++++. +|..|.||||+|+..+  +.++  +|. .|+++|.+
T Consensus       170 ---------d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~-~d~~G~TpLH~Aa~~~~~~~~iv~lLl-~gadin~~  238 (446)
T PHA02946        170 ---------DKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK-PDHDGNTPLHIVCSKTVKNVDIINLLL-PSTDVNKQ  238 (446)
T ss_pred             ---------CCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHcCCCcHHHHHHHH-cCCCCCCC
Confidence                     456899999998765  47999999999999996 9999999999999987  4455  444 48999999


Q ss_pred             CCCCCchHHHHHhcCCCCCccccccH-HHHHHHHHcCCCCcc---------------hhhhccCC-cCCchHHHHHHHcC
Q 048228          250 NSHGDTFLHMVVAGFRSPGFRRVDHQ-IQLMEQLVSGKIVEV---------------KDIINVTN-NNGRTALHLAVSEN  312 (629)
Q Consensus       250 d~~g~TpLh~A~~~~~~~~~~~~~~~-~eivk~Ll~~g~~d~---------------~a~in~~d-~~g~TpLh~A~~~~  312 (629)
                      |..|.||||+|+..          ++ .+++++|+++|....               -..++..+ ..|.||||+|+..|
T Consensus       239 d~~G~TpLh~A~~~----------~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g  308 (446)
T PHA02946        239 NKFGDSPLTLLIKT----------LSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVG  308 (446)
T ss_pred             CCCCCCHHHHHHHh----------CChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcC
Confidence            99999999999994          44 689999999872100               00122222 35789999999999


Q ss_pred             CcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCC
Q 048228          313 IQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGS  392 (629)
Q Consensus       313 ~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~  392 (629)
                       +.++|++||+ +|+       .|.||||+|+..++.+    ++++|+.+|+++|.. ..|.||||+|++.+        
T Consensus       309 -~~eivk~Ll~-~~~-------~~~t~L~~A~~~~~~~----~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~--------  366 (446)
T PHA02946        309 -SIRCVKYLLD-NDI-------ICEDAMYYAVLSEYET----MVDYLLFNHFSVDSV-VNGHTCMSECVRLN--------  366 (446)
T ss_pred             -CHHHHHHHHH-CCC-------ccccHHHHHHHhCHHH----HHHHHHHCCCCCCCc-cccccHHHHHHHcC--------
Confidence             9999999999 774       5799999999999877    999999999999985 68999999999887        


Q ss_pred             CCChhhHHHHHHcCCC
Q 048228          393 SFRVPDAEIFLYTGIE  408 (629)
Q Consensus       393 ~~~~~~v~~LL~~Gad  408 (629)
                        +.++++.|+.+..+
T Consensus       367 --~~~~~~~ll~~~~~  380 (446)
T PHA02946        367 --NPVILSKLMLHNPT  380 (446)
T ss_pred             --CHHHHHHHHhcCcc
Confidence              69999999985443


No 4  
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=4e-46  Score=405.23  Aligned_cols=356  Identities=15%  Similarity=0.126  Sum_probs=281.4

Q ss_pred             CCCCCcHHHHHHHCC---CHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcC--cHHHHHHHhhccccc
Q 048228           16 QWWYASPIDFAAANG---HYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCR--SSVARKLLHDCETKK   90 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G---~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~--~~~i~~lL~~~~~~~   90 (629)
                      ++.|+||||+|+.+|   +.|+|++||++|||++.++            ..|.||||+|+..+  +.+++++|++    .
T Consensus        38 d~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD------------~~G~TPLh~Aa~~~~~~~eIv~~Ll~----~  101 (672)
T PHA02730         38 DRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRN------------NEGLTPLGVYSKRKYVKSQIVHLLIS----S  101 (672)
T ss_pred             CCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccC------------CCCCChHHHHHHcCCCcHHHHHHHHh----c
Confidence            567899999999997   5999999999999999765            78999999999866  7999999999    7


Q ss_pred             CC--CcccccCCCChHHHHHHH--cCCHHHHHHHHhcCCCccccCC-----CCCCCHHHHHHHHcCCHHHHHHHHHcCCC
Q 048228           91 GH--NSLIRAGYGGWLLYTAAS--AGDVRFVKELLQRDPLLVFGEG-----EYGVTDILYAAARSKNSEVFRLLLDNAVA  161 (629)
Q Consensus        91 g~--~~~~~d~~g~tpLh~A~~--~g~~~~v~~LL~~g~~~~~~~d-----~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~  161 (629)
                      |+  +++..+..+.+|||.++.  .++.++|++|++.+...++...     ..|.+|++++ ...++.+||++|+++|++
T Consensus       102 ~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~-~~~~~~eIvklLi~~g~~  180 (672)
T PHA02730        102 YSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVT-TPNPRPEVLLWLLKSECY  180 (672)
T ss_pred             CCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHh-cCCCchHHHHHHHHcCCc
Confidence            55  457788789999999988  9999999999974432233332     3789999998 888999999999999999


Q ss_pred             CccccCCCCchhhhhccchhHHhhhccchHHHHH------HhcCCHHHHHHHHhCCCCcccccCCCCCcHHHH--HHhcC
Q 048228          162 PRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAV------ARGGNLDILRQLLGDCENVLAYRDVQGSTILHS--ASGRG  233 (629)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A------~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~--A~~~g  233 (629)
                      ++-..-.+           .........|.||++      ...++.|++++||++|++++. +|..|.||||+  |+..+
T Consensus       181 v~g~~~~~-----------~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~-kd~~G~TpLh~~~~~~~~  248 (672)
T PHA02730        181 STGYVFRS-----------CMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHG-RDEGGSLPIQYYWSCSTI  248 (672)
T ss_pred             cccccccc-----------ccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCcc
Confidence            85110000           001112233566644      345789999999999999996 99999999995  55556


Q ss_pred             Ccce--eccc--------------------------------CCCCccc--------------------cCCCCCc----
Q 048228          234 QVEV--LIAK--------------------------------SPSLISV--------------------TNSHGDT----  255 (629)
Q Consensus       234 ~~~i--lL~~--------------------------------~gadin~--------------------~d~~g~T----  255 (629)
                      +.|+  +|+.                                .|+|+..                    .+..|.+    
T Consensus       249 ~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  328 (672)
T PHA02730        249 DIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYII  328 (672)
T ss_pred             cHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHH
Confidence            6777  4445                                6888766                    4555544    


Q ss_pred             -----------------hHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCc---H
Q 048228          256 -----------------FLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQ---C  315 (629)
Q Consensus       256 -----------------pLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~---~  315 (629)
                                       .||.-...+.       ..+.+++++|+++|     |++|.. ..|.||||+|+..+.+   .
T Consensus       329 ~~i~~~~~~~~~~~~q~~l~~Y~~~~~-------~v~ieIvelLIs~G-----AdIN~k-~~G~TpLH~Aa~~nnn~i~~  395 (672)
T PHA02730        329 DNILKRFRQQDESIVQAMLINYLHYGD-------MVSIPILRCMLDNG-----ATMDKT-TDNNYPLHDYFVNNNNIVDV  395 (672)
T ss_pred             HHHHHhhhccchhHHHHHHHHHHhcCC-------cCcHHHHHHHHHCC-----CCCCcC-CCCCcHHHHHHHHcCCcchH
Confidence                             4555555310       15799999999999     779985 7999999999987722   8


Q ss_pred             HHHHHHhcCCCC--CcccCCCCCCcHHHH---HHhCCC----Cch-HHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCC
Q 048228          316 NLVELLMTVPSI--NLNIQDGEGMTPLDL---LKQHPR----SAS-SEILIKQLISAGGISNCQDNVARNAIACHLKGQG  385 (629)
Q Consensus       316 ~iv~~Ll~~~ga--dvn~~d~~G~TpLh~---A~~~~~----~~~-~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~  385 (629)
                      +++++||+ +|+  |+|.+|..|.||||.   |...+.    .+. ...++++|+++|||+|.+|..|+||||+|+..+ 
T Consensus       396 eIvelLIs-~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~-  473 (672)
T PHA02730        396 NVVRFIVE-NNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVN-  473 (672)
T ss_pred             HHHHHHHH-cCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhC-
Confidence            99999999 887  699999999999994   332321    121 224799999999999999999999999999876 


Q ss_pred             CCCCCCCCCChhhHHHHHHcCCCCccccc-cCCChhhhhh
Q 048228          386 IGVSPGSSFRVPDAEIFLYTGIENASDAI-CDAASVEYSS  424 (629)
Q Consensus       386 ~~~~~~~~~~~~~v~~LL~~Gad~~~~d~-~g~t~~~~a~  424 (629)
                               +.+++++|+++||+++..+. .|+|+++++.
T Consensus       474 ---------~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa  504 (672)
T PHA02730        474 ---------NIQFARRLLEYGASVNTTSRSIINTAIQKSS  504 (672)
T ss_pred             ---------CHHHHHHHHHCCCCCCCCCCcCCcCHHHHHH
Confidence                     58999999999999999997 6999998874


No 5  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=6.1e-46  Score=400.14  Aligned_cols=326  Identities=13%  Similarity=0.094  Sum_probs=278.7

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHh--cCcHHHHHHHhhcccccCCCccccc
Q 048228           21 SPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAK--CRSSVARKLLHDCETKKGHNSLIRA   98 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~--~~~~~i~~lL~~~~~~~g~~~~~~d   98 (629)
                      -+|+.++..|+.+.++.+|+....                 ..+.++||.++.  ....+++++|++    +|++++.+|
T Consensus        11 ~sl~~~~~~~n~~~~~~~l~~~~~-----------------~g~~~~Lh~~~~~~~~~~~iv~~Ll~----~Gadvn~~d   69 (446)
T PHA02946         11 LSLYAKYNSKNLDVFRNMLQAIEP-----------------SGNYHILHAYCGIKGLDERFVEELLH----RGYSPNETD   69 (446)
T ss_pred             HHHHHHHccCcHHHHHHHHhccCC-----------------CCCChHHHHHHHhcCCCHHHHHHHHH----CcCCCCccC
Confidence            567888999999999999986322                 235789998764  357889999999    999999999


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc-CCHHHHHHHHHcCCCCccccCCCCchhhhhc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS-KNSEVFRLLLDNAVAPRCCLSSGGEFEEKLS  177 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~-g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~  177 (629)
                      ..|.||||+||..|+.++|++||++|++ ++.+|..|.||||+|+... +..+++++|+++|++++..            
T Consensus        70 ~~G~TpLh~Aa~~g~~eiv~lLL~~GAd-in~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~------------  136 (446)
T PHA02946         70 DDGNYPLHIASKINNNRIVAMLLTHGAD-PNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNS------------  136 (446)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCcCC-CCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccc------------
Confidence            9999999999999999999999999998 5889999999999985432 3589999999999998843            


Q ss_pred             cchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce----ecccCCCCccccCCCC
Q 048228          178 DSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV----LIAKSPSLISVTNSHG  253 (629)
Q Consensus       178 ~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i----lL~~~gadin~~d~~g  253 (629)
                            .+..|.|||| |+..++.+++++|++.|++++. .|..|+||||+|+..++..+    +|++.|++++.+|..|
T Consensus       137 ------~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~-~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G  208 (446)
T PHA02946        137 ------VDEEGCGPLL-ACTDPSERVFKKIMSIGFEARI-VDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDG  208 (446)
T ss_pred             ------cCCCCCcHHH-HHHCCChHHHHHHHhccccccc-cCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCC
Confidence                  2345789998 6677999999999999999995 99999999999998777543    7888999999999999


Q ss_pred             CchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcc---
Q 048228          254 DTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLN---  330 (629)
Q Consensus       254 ~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn---  330 (629)
                      +||||+|+..+        .++.+++++|+. +     +++|.+|..|+||||+|+..+...+++++|++ +|++++   
T Consensus       209 ~TpLH~Aa~~~--------~~~~~iv~lLl~-g-----adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~-~g~~~~~~~  273 (446)
T PHA02946        209 NTPLHIVCSKT--------VKNVDIINLLLP-S-----TDVNKQNKFGDSPLTLLIKTLSPAHLINKLLS-TSNVITDQT  273 (446)
T ss_pred             CCHHHHHHHcC--------CCcHHHHHHHHc-C-----CCCCCCCCCCCCHHHHHHHhCChHHHHHHHHh-CCCCCCCcH
Confidence            99999999841        148899999995 6     56999999999999999999823689999999 887542   


Q ss_pred             -----------------cCC-CCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCC
Q 048228          331 -----------------IQD-GEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGS  392 (629)
Q Consensus       331 -----------------~~d-~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~  392 (629)
                                       ..+ ..|.||||+|+..|+.+    ++++||++|+       .|+||||+|+..+        
T Consensus       274 ~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~e----ivk~Ll~~~~-------~~~t~L~~A~~~~--------  334 (446)
T PHA02946        274 VNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIR----CVKYLLDNDI-------ICEDAMYYAVLSE--------  334 (446)
T ss_pred             HHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHH----HHHHHHHCCC-------ccccHHHHHHHhC--------
Confidence                             222 35789999999999988    9999999875       4789999999887        


Q ss_pred             CCChhhHHHHHHcCCCCccccccCCChhhhhhh
Q 048228          393 SFRVPDAEIFLYTGIENASDAICDAASVEYSSC  425 (629)
Q Consensus       393 ~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a~~  425 (629)
                        +.++|++|+.+|++++.+ ..|.|+++++..
T Consensus       335 --~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~  364 (446)
T PHA02946        335 --YETMVDYLLFNHFSVDSV-VNGHTCMSECVR  364 (446)
T ss_pred             --HHHHHHHHHHCCCCCCCc-cccccHHHHHHH
Confidence              689999999999999986 589999998843


No 6  
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.5e-45  Score=408.52  Aligned_cols=396  Identities=15%  Similarity=0.056  Sum_probs=297.1

Q ss_pred             CCCCCcHHHHHHHC---CCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcH----HHHHHHhhccc
Q 048228           16 QWWYASPIDFAAAN---GHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSS----VARKLLHDCET   88 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~---G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~----~i~~lL~~~~~   88 (629)
                      +..|+||||+||..   |+.++|++||++|++++.++            +.|.||||+|+..|+.    +++++|++   
T Consensus        29 d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~------------~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~---   93 (661)
T PHA02917         29 NQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKN------------WRQLTPLEEYTNSRHVKVNKDIAMALLE---   93 (661)
T ss_pred             CCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccC------------CCCCCHHHHHHHcCChhHHHHHHHHHHh---
Confidence            56789999998665   88999999999999998653            7799999999999874    45567776   


Q ss_pred             ccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHH-HHcCCHHHHHHHHHcCCCCccccC
Q 048228           89 KKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAA-ARSKNSEVFRLLLDNAVAPRCCLS  167 (629)
Q Consensus        89 ~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA-~~~g~~~iv~~Ll~~Ga~~~~~~~  167 (629)
                       .+..++..+  ..+++|+|+..|+.++|++|+++|++ ++..|..|+||||+++ +..|+.+++++|+++|++++....
T Consensus        94 -~~~~~n~~~--~~~~~~~a~~~~~~e~vk~Ll~~Gad-in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~  169 (661)
T PHA02917         94 -ATGYSNIND--FNIFSYMKSKNVDVDLIKVLVEHGFD-LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDE  169 (661)
T ss_pred             -ccCCCCCCC--cchHHHHHhhcCCHHHHHHHHHcCCC-CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccc
Confidence             443344443  23778899999999999999999999 6889999999999654 467999999999999999985432


Q ss_pred             CCCchhhhhccchhHHhhhccchHHHHHHh-----------cCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcc
Q 048228          168 SGGEFEEKLSDSYSVFKWEMMNRAVHAVAR-----------GGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVE  236 (629)
Q Consensus       168 ~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~-----------~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~  236 (629)
                      .+.+     +..........+.||||+|+.           .++.++|++|+++|+|++. +|..|.||||+|+..|+.+
T Consensus       170 ~~~~-----g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~-~d~~G~TpLh~A~~~g~~~  243 (661)
T PHA02917        170 DDEY-----GYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS-IDKNYCTALQYYIKSSHID  243 (661)
T ss_pred             cccc-----ccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc-CCCCCCcHHHHHHHcCCCc
Confidence            2100     000011223456799999986           4689999999999999996 9999999999999999974


Q ss_pred             --e--ecccCCCCcc----ccCCCCCchHHHHHhcCCCCCcccc-ccHHHHHHHHHcCCCCcchh---hhccCC------
Q 048228          237 --V--LIAKSPSLIS----VTNSHGDTFLHMVVAGFRSPGFRRV-DHQIQLMEQLVSGKIVEVKD---IINVTN------  298 (629)
Q Consensus       237 --i--lL~~~gadin----~~d~~g~TpLh~A~~~~~~~~~~~~-~~~~eivk~Ll~~g~~d~~a---~in~~d------  298 (629)
                        +  +|. .|++++    ..|..|.||+|+|+.-.+.  ++.- ..+.+++++|++.| ++...   ..+..+      
T Consensus       244 ~eivk~Li-~g~d~~~~~~~~~~~~~~~~~~a~yl~~~--~~~~~~v~~~iv~~Li~~G-a~~~~~~~~~~~~~~~~~~~  319 (661)
T PHA02917        244 IDIVKLLM-KGIDNTAYSYIDDLTCCTRGIMADYLNSD--YRYNKDVDLDLVKLFLENG-KPHGIMCSIVPLWRNDKETI  319 (661)
T ss_pred             HHHHHHHH-hCCcccccccccCcccccchHHHHHHHhh--ccccccchHHHHHHHHhCC-CCCceeEeeecccccchHHH
Confidence              5  555 478775    4566789999999841100  0000 13889999999999 43100   001122      


Q ss_pred             ------cCCchHHHHHH---HcCC-cHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCC
Q 048228          299 ------NNGRTALHLAV---SENI-QCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLIS-AGGISN  367 (629)
Q Consensus       299 ------~~g~TpLh~A~---~~~~-~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn  367 (629)
                            ..+.++||++.   ..|. ..++|++||+ +|||+|.++.+|.|+.    .....+    ++++||. .|++++
T Consensus       320 ~~~~~~~~~~~~~~~l~~~~~~g~~~~~~v~~Ll~-~GAdvn~~~~~g~~~~----~~~~~~----~i~~LL~~~ga~~~  390 (661)
T PHA02917        320 SLILKTMNSDVLQHILIEYMTFGDIDIPLVECMLE-YGAVVNKEAIHGYFRN----INIDSY----TMKYLLKKEGGDAV  390 (661)
T ss_pred             HHHHHHhchHHHHHHHHHHHHcCCCcHHHHHHHHH-cCCCCCCCCccccchh----hcCCHH----HHHHHHHhcCCCcc
Confidence                  23445555444   3551 3669999999 9999999999999865    233333    6777776 799988


Q ss_pred             CCCCCCccHHHHHHHhCCC-------CCCC------CCCCChhhHHHHHHcCCCCccccccCCChhhhhh---------h
Q 048228          368 CQDNVARNAIACHLKGQGI-------GVSP------GSSFRVPDAEIFLYTGIENASDAICDAASVEYSS---------C  425 (629)
Q Consensus       368 ~~d~~G~TpL~~A~~~~~~-------~~~~------~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a~---------~  425 (629)
                      ..+.+|+||||.|++....       ....      ......+++++|+.+|||++.+|..|+||++++.         .
T Consensus       391 ~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~  470 (661)
T PHA02917        391 NHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSL  470 (661)
T ss_pred             ccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHH
Confidence            8888999999999754320       0000      0001467899999999999999999999999983         6


Q ss_pred             hccCCCCCCCCCCCCCCCCcHHHHHH
Q 048228          426 LSEQSDFDSSNTPDDKKSSPIDYAAR  451 (629)
Q Consensus       426 ~~e~g~~~d~n~~~~~~~~~~~~aa~  451 (629)
                      +++.|+  +++..+..|.+|+++|+.
T Consensus       471 Ll~~GA--din~~d~~G~T~L~~A~~  494 (661)
T PHA02917        471 LLESGS--DVNIRSNNGYTCIAIAIN  494 (661)
T ss_pred             HHHCcC--CCCCCCCCCCCHHHHHHH
Confidence            888999  999999999999999985


No 7  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=5e-45  Score=404.12  Aligned_cols=335  Identities=15%  Similarity=0.109  Sum_probs=271.8

Q ss_pred             HCCCHHHHHHHHHhC-CCchhhhhhhHhhhhccccCCCCcHHHHHHhc--CcHHHHHHHhhcccccCCCcccccCCCChH
Q 048228           28 ANGHYELVKELLHLD-TNLLIKLTSLRRIRRLETVWDDEEQFDDVAKC--RSSVARKLLHDCETKKGHNSLIRAGYGGWL  104 (629)
Q Consensus        28 ~~G~~~~v~~LL~~g-ad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~--~~~~i~~lL~~~~~~~g~~~~~~d~~g~tp  104 (629)
                      ..++.++|++|++.| +|+|.+           ....|.||||+|+..  ++.+++++|++    +|++++.+|..|.||
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~-----------~d~~G~TpLH~A~~n~~~~~eIVklLLe----~GADVN~kD~~G~TP  215 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYV-----------CKKTGYGILHAYLGNMYVDIDILEWLCN----NGVNVNLQNNHLITP  215 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccc-----------cCCCCCcHHHHHHHhccCCHHHHHHHHH----cCCCCCCCCCCCCCH
Confidence            469999999999999 999865           135799999998754  67899999999    999999999999999


Q ss_pred             HHHHHHcCC--HHHHHHHHhcCCCccccCCCCCCCHHHHHH--HHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccch
Q 048228          105 LYTAASAGD--VRFVKELLQRDPLLVFGEGEYGVTDILYAA--ARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSY  180 (629)
Q Consensus       105 Lh~A~~~g~--~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA--~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~  180 (629)
                      ||+|+..|+  .++|++||++|++ ++.+|..|+||||+|+  +..++.+++++|++.+......               
T Consensus       216 LH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~---------------  279 (764)
T PHA02716        216 LHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK---------------  279 (764)
T ss_pred             HHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc---------------
Confidence            999999995  5999999999998 6889999999999984  3568999999999875321110               


Q ss_pred             hHHhhhccchHH---HHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhc--CCcce--ecccCCCCccccCCCC
Q 048228          181 SVFKWEMMNRAV---HAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGR--GQVEV--LIAKSPSLISVTNSHG  253 (629)
Q Consensus       181 ~~~~d~~g~t~L---h~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~--g~~~i--lL~~~gadin~~d~~g  253 (629)
                            ....+|   ..|+..|+.++|++|+++|++++. +|..|+||||+|+..  ++.++  +|++.|++++.+|..|
T Consensus       280 ------~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~-kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G  352 (764)
T PHA02716        280 ------NIPMILHSYITLARNIDISVVYSFLQPGVKLHY-KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIG  352 (764)
T ss_pred             ------cchhhhHHHHHHHHcCCHHHHHHHHhCCCceec-cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCC
Confidence                  011233   358899999999999999999995 999999999998754  46676  7788999999999999


Q ss_pred             CchHHHHHhcCCCCC-c---cccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHH---H-HcCCcHHHHHHHhcCC
Q 048228          254 DTFLHMVVAGFRSPG-F---RRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLA---V-SENIQCNLVELLMTVP  325 (629)
Q Consensus       254 ~TpLh~A~~~~~~~~-~---~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A---~-~~~~~~~iv~~Ll~~~  325 (629)
                      +||||+|+....... +   ....++.+++++|+++|     ++++.+|..|+||||.+   + ..+ +.+++++|++ .
T Consensus       353 ~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-----ADIn~kn~~G~TPLh~y~~~a~n~~-~~dIvklLis-~  425 (764)
T PHA02716        353 NTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-----ADITAVNCLGYTPLTSYICTAQNYM-YYDIIDCLIS-D  425 (764)
T ss_pred             CCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-----CCCCCcCCCCCChHHHHHHHHHhcC-hHHHHHHHHh-C
Confidence            999999875210000 0   00036899999999999     77999999999999942   2 234 7889988887 4


Q ss_pred             CC-------------------------------------------------------------CcccCCCCCCcHHHHHH
Q 048228          326 SI-------------------------------------------------------------NLNIQDGEGMTPLDLLK  344 (629)
Q Consensus       326 ga-------------------------------------------------------------dvn~~d~~G~TpLh~A~  344 (629)
                      |+                                                             ++|..|..|+||||+|+
T Consensus       426 ~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa  505 (764)
T PHA02716        426 KVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSI  505 (764)
T ss_pred             cchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHH
Confidence            42                                                             34566888999999999


Q ss_pred             hCCCCchH-HHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccc
Q 048228          345 QHPRSASS-EILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASD  412 (629)
Q Consensus       345 ~~~~~~~~-~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~  412 (629)
                      ..++.+.+ .+++++|++.|+|+|.+|.+|+||||+|++.+....     .+.++|++||++|++++..
T Consensus       506 ~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~-----~~~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        506 ISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSG-----HQWYIVKNILDKRPNVDIV  569 (764)
T ss_pred             HcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccc-----cHHHHHHHHHhcCCCcchH
Confidence            99887632 346799999999999999999999999998773210     0359999999999998866


No 8  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.4e-43  Score=384.14  Aligned_cols=316  Identities=18%  Similarity=0.215  Sum_probs=278.8

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCC-CchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccC
Q 048228           21 SPIDFAAANGHYELVKELLHLDT-NLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAG   99 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~ga-d~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~   99 (629)
                      ..|+.|+..|++++|+.|++.+. .++..            ..++.||||.|+..|+.+++++|++    .|++++..+.
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~------------~~~~~tpL~~A~~~g~~~iv~~Ll~----~Ga~~n~~~~   66 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINIS------------VDETTTPLIDAIRSGDAKIVELFIK----HGADINHINT   66 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCc------------CCCCCCHHHHHHHcCCHHHHHHHHH----CCCCCCCCCC
Confidence            46899999999999999998654 34432            3568999999999999999999999    9999999999


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccc
Q 048228          100 YGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDS  179 (629)
Q Consensus       100 ~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~  179 (629)
                      .|.||||.|+..|+.++|++|+++|++...         +  + ....+.+++++|+++|++++..+             
T Consensus        67 ~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~---------~--~-~~~~~~~~i~~ll~~g~d~n~~~-------------  121 (434)
T PHA02874         67 KIPHPLLTAIKIGAHDIIKLLIDNGVDTSI---------L--P-IPCIEKDMIKTILDCGIDVNIKD-------------  121 (434)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCCCc---------c--h-hccCCHHHHHHHHHCcCCCCCCC-------------
Confidence            999999999999999999999999976311         1  1 33467899999999999988553             


Q ss_pred             hhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchH
Q 048228          180 YSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFL  257 (629)
Q Consensus       180 ~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpL  257 (629)
                            ..|.||||+|+..|+.++|++|+++|++++. +|..|.||||+|+..++.++  +|.+.|++++..|..|.|||
T Consensus       122 ------~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL  194 (434)
T PHA02874        122 ------AELKTFLHYAIKKGDLESIKMLFEYGADVNI-EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPL  194 (434)
T ss_pred             ------CCCccHHHHHHHCCCHHHHHHHHhCCCCCCC-cCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence                  4578999999999999999999999999995 99999999999999999999  88889999999999999999


Q ss_pred             HHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCC
Q 048228          258 HMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGM  337 (629)
Q Consensus       258 h~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~  337 (629)
                      |+|+.          .++.+++++|++.|     ++++.++..|.||||+|+..+ . +++++|+.  |+++|.+|..|+
T Consensus       195 ~~A~~----------~g~~~iv~~Ll~~g-----~~i~~~~~~g~TpL~~A~~~~-~-~~i~~Ll~--~~~in~~d~~G~  255 (434)
T PHA02874        195 HNAAE----------YGDYACIKLLIDHG-----NHIMNKCKNGFTPLHNAIIHN-R-SAIELLIN--NASINDQDIDGS  255 (434)
T ss_pred             HHHHH----------cCCHHHHHHHHhCC-----CCCcCCCCCCCCHHHHHHHCC-h-HHHHHHHc--CCCCCCcCCCCC
Confidence            99999          59999999999999     669999999999999999876 4 67777775  899999999999


Q ss_pred             cHHHHHHhCC-CCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccC
Q 048228          338 TPLDLLKQHP-RSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICD  416 (629)
Q Consensus       338 TpLh~A~~~~-~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g  416 (629)
                      ||||+|+..+ +.+    ++++|+++|+|++.+|..|+|||++|++...         ..++++.|+..++.++..+..+
T Consensus       256 TpLh~A~~~~~~~~----iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~---------~~~~ik~ll~~~~~~~~~~~~~  322 (434)
T PHA02874        256 TPLHHAINPPCDID----IIDILLYHKADISIKDNKGENPIDTAFKYIN---------KDPVIKDIIANAVLIKEADKLK  322 (434)
T ss_pred             CHHHHHHhcCCcHH----HHHHHHHCcCCCCCCCCCCCCHHHHHHHhCC---------ccHHHHHHHHhcCchhhccccc
Confidence            9999999876 445    9999999999999999999999999998652         3678999999998776554433


No 9  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=2.5e-44  Score=380.88  Aligned_cols=334  Identities=21%  Similarity=0.212  Sum_probs=293.1

Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcc
Q 048228           16 QWWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSL   95 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~   95 (629)
                      .-+|+|++|.|+..+..      ++.-+....+            +..+.+|||+|++....+.++.|++    .|++++
T Consensus        58 ~~~gd~~~~~~~~~~y~------~~~~~~~~a~------------D~~~n~~l~~a~~~~~~~~i~~Lls----~gad~~  115 (929)
T KOG0510|consen   58 RAFGDTELHHASARNYI------LSKLAISYAK------------DSADNTPLHAAVEYNQGDKIQVLLS----YGADTP  115 (929)
T ss_pred             hhhchhHHHHHHhhcch------hhhhhhhhhh------------hcccCchhHHHhhcchHHHHHHHHh----cCCCCC
Confidence            34688999998888865      2222222222            2468899999999999999999999    999999


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhh
Q 048228           96 IRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEK  175 (629)
Q Consensus        96 ~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~  175 (629)
                      ..+.++.+|+|+|+..|+.++.+.|++++++ ++..|+.|.||||+| +..++.|..+.|++.|+++...          
T Consensus       116 ~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~d-vnl~de~~~TpLh~A-~~~~~~E~~k~Li~~~a~~~K~----------  183 (929)
T KOG0510|consen  116 LRNLNKNAPLHLAADSGNYSCLKLLLDYGAD-VNLEDENGFTPLHLA-ARKNKVEAKKELINKGADPCKS----------  183 (929)
T ss_pred             hhhhhccCchhhccccchHHHHHHHHHhcCC-ccccccCCCchhhHH-HhcChHHHHHHHHhcCCCCCcc----------
Confidence            9999999999999999999999999999977 799999999999998 6779999889999999988755          


Q ss_pred             hccchhHHhhhccchHHHHHHhcCCHHHHHHHHh-----CCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCC----
Q 048228          176 LSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLG-----DCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPS----  244 (629)
Q Consensus       176 ~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~-----~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~ga----  244 (629)
                               +..|++|+|.|++.|..++.+..+.     ++..+| ..+..|.||||.|+..|+.++  .+++.|.    
T Consensus       184 ---------~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in-~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~  253 (929)
T KOG0510|consen  184 ---------DIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHIN-FDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIAD  253 (929)
T ss_pred             ---------cCcCCchHHHHHHhcchhhhhhhhccccchhhcccc-cccCCCCcchhhhhhcCCHHHHHHHHhCccccch
Confidence                     3457899999999999999999998     677888 489999999999999999988  2322222    


Q ss_pred             -----------CccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCC
Q 048228          245 -----------LISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENI  313 (629)
Q Consensus       245 -----------din~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~  313 (629)
                                 -+|..|.+|.||||+|++          +|+.+.++.|+..|     ++++.++.++.||||.||.+| 
T Consensus       254 ~~~~~~~q~kelv~~~d~dg~tpLH~a~r----------~G~~~svd~Ll~~G-----a~I~~kn~d~~spLH~AA~yg-  317 (929)
T KOG0510|consen  254 VQLDAMQQEKELVNDEDNDGCTPLHYAAR----------QGGPESVDNLLGFG-----ASINSKNKDEESPLHFAAIYG-  317 (929)
T ss_pred             hhhHHHHHHHHHhhcccccCCchHHHHHH----------cCChhHHHHHHHcC-----CcccccCCCCCCchHHHHHcc-
Confidence                       256678999999999999          69999999999999     779999999999999999999 


Q ss_pred             cHHHHHHHhcC-CCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCC---CCCCCCccHHHHHHHhCCCCCC
Q 048228          314 QCNLVELLMTV-PSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISN---CQDNVARNAIACHLKGQGIGVS  389 (629)
Q Consensus       314 ~~~iv~~Ll~~-~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn---~~d~~G~TpL~~A~~~~~~~~~  389 (629)
                      +.++|+-||+. .-..+|..|-.|+||||+|++.|+..    ++++||+.||+.+   ..|.+|.||||.|++.+     
T Consensus       318 ~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~----v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g-----  388 (929)
T KOG0510|consen  318 RINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDR----VVQLLLNKGALFLNMSEADSDGNTALHLAAKYG-----  388 (929)
T ss_pred             cHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHH----HHHHHHhcChhhhcccccccCCchhhhHHHHhc-----
Confidence            99999999993 45678999999999999999999987    9999999999988   56999999999999988     


Q ss_pred             CCCCCChhhHHHHHHcCCCCccccccCCChhhhh
Q 048228          390 PGSSFRVPDAEIFLYTGIENASDAICDAASVEYS  423 (629)
Q Consensus       390 ~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a  423 (629)
                           +..+|++|+.+||++..+++.|.+++++.
T Consensus       389 -----~~~av~~Li~~Ga~I~~~n~~g~SA~~~~  417 (929)
T KOG0510|consen  389 -----NTSAVQKLISHGADIGVKNKKGKSAFDTR  417 (929)
T ss_pred             -----cHHHHHHHHHcCCceeecccccccccccc
Confidence                 69999999999999999999999999963


No 10 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=3.4e-43  Score=389.61  Aligned_cols=331  Identities=14%  Similarity=0.058  Sum_probs=265.2

Q ss_pred             CCCCCcHHHHHHH--CCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCc--HHHHHHHhhcccccC
Q 048228           16 QWWYASPIDFAAA--NGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRS--SVARKLLHDCETKKG   91 (629)
Q Consensus        16 ~~~g~TpLh~Aa~--~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~--~~i~~lL~~~~~~~g   91 (629)
                      +..|.||||+|+.  +++.++|++|+++|++++.++            ..|.||||+|++.++  .+++++|++    +|
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD------------~~G~TPLH~Aa~~g~~~~eIVklLLe----~G  237 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQN------------NHLITPLHTYLITGNVCASVIKKIIE----LG  237 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCC------------CCCCCHHHHHHHcCCCCHHHHHHHHH----cC
Confidence            3468899999875  468999999999999998754            679999999999984  589999999    99


Q ss_pred             CCcccccCCCChHHHHHH---HcCCHHHHHHHHhcCCCccccCCCCCCCHHHH--HHHHcCCHHHHHHHHHcCCCCcccc
Q 048228           92 HNSLIRAGYGGWLLYTAA---SAGDVRFVKELLQRDPLLVFGEGEYGVTDILY--AAARSKNSEVFRLLLDNAVAPRCCL  166 (629)
Q Consensus        92 ~~~~~~d~~g~tpLh~A~---~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~--AA~~~g~~~iv~~Ll~~Ga~~~~~~  166 (629)
                      ++++.+|..|.||||+|+   ..++.++++.|++.+... ..  ....++++.  .|+..|+.+++++|+++|++++.. 
T Consensus       238 ADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n-~~--~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~k-  313 (764)
T PHA02716        238 GDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGN-KV--KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYK-  313 (764)
T ss_pred             CCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhcccc-cc--ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceecc-
Confidence            999999999999999885   568999999999875331 11  111122332  247889999999999999988754 


Q ss_pred             CCCCchhhhhccchhHHhhhccchHHHHHHh--cCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhc------------
Q 048228          167 SSGGEFEEKLSDSYSVFKWEMMNRAVHAVAR--GGNLDILRQLLGDCENVLAYRDVQGSTILHSASGR------------  232 (629)
Q Consensus       167 ~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~--~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~------------  232 (629)
                                        |..|+||||+|+.  .++.+++++|+++|++++. +|..|+||||+|+..            
T Consensus       314 ------------------D~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~-kD~~G~TPLH~A~~~lav~~~ld~~~~  374 (764)
T PHA02716        314 ------------------DSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNE-PDNIGNTVLHTYLSMLSVVNILDPETD  374 (764)
T ss_pred             ------------------CCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCcc-CCCCCCCHHHHHHHhhhhhcccccccc
Confidence                              4558899999875  4689999999999999996 999999999998752            


Q ss_pred             --CCcce--ecccCCCCccccCCCCCchHHHHH-hcCCCCCccccccHHHHHHHHHcCCCCc------------------
Q 048228          233 --GQVEV--LIAKSPSLISVTNSHGDTFLHMVV-AGFRSPGFRRVDHQIQLMEQLVSGKIVE------------------  289 (629)
Q Consensus       233 --g~~~i--lL~~~gadin~~d~~g~TpLh~A~-~~~~~~~~~~~~~~~eivk~Ll~~g~~d------------------  289 (629)
                        ++.++  +|++.|++++.+|..|+||||.++ ....       .++.+++++|++.+...                  
T Consensus       375 ~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n-------~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~  447 (764)
T PHA02716        375 NDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQN-------YMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTP  447 (764)
T ss_pred             ccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHh-------cChHHHHHHHHhCcchhhhhhhhhhhhhhccCcch
Confidence              45566  778899999999999999999432 2100       36788888888754100                  


Q ss_pred             --------------------------------------chhhhccCCcCCchHHHHHHHcCCcH-----HHHHHHhcCCC
Q 048228          290 --------------------------------------VKDIINVTNNNGRTALHLAVSENIQC-----NLVELLMTVPS  326 (629)
Q Consensus       290 --------------------------------------~~a~in~~d~~g~TpLh~A~~~~~~~-----~iv~~Ll~~~g  326 (629)
                                                            ...++|..|..|+||||+|+..+ +.     +++++||+ .|
T Consensus       448 ~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g-~~~~v~~e~~k~LL~-~G  525 (764)
T PHA02716        448 CIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISH-TNANIVMDSFVYLLS-IQ  525 (764)
T ss_pred             hhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcC-CccchhHHHHHHHHh-CC
Confidence                                                  01234667889999999999988 65     55699999 99


Q ss_pred             CCcccCCCCCCcHHHHHHhCCCCch-HHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHc
Q 048228          327 INLNIQDGEGMTPLDLLKQHPRSAS-SEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYT  405 (629)
Q Consensus       327 advn~~d~~G~TpLh~A~~~~~~~~-~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~  405 (629)
                      +|+|.+|.+|+||||+|+++|+.+. ..+++++||++|++++..      .|+++....          +.+++.+|..+
T Consensus       526 ADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------~l~~~~~~~----------~~~~~~ll~~~  589 (764)
T PHA02716        526 YNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------IIFLDKCYA----------NGKFPSLLLSE  589 (764)
T ss_pred             CCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------HHHHHhhhh----------hhHHHHHHHHc
Confidence            9999999999999999999998732 234999999999999876      377776554          57899999999


Q ss_pred             CCCCc
Q 048228          406 GIENA  410 (629)
Q Consensus       406 Gad~~  410 (629)
                      |+.+-
T Consensus       590 ~~~~~  594 (764)
T PHA02716        590 DDIIK  594 (764)
T ss_pred             chhHH
Confidence            98654


No 11 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.3e-42  Score=375.81  Aligned_cols=371  Identities=12%  Similarity=0.047  Sum_probs=289.4

Q ss_pred             HHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcC---cHHHHHHHhhcccccCCCcccccCCCChHHHHH
Q 048228           32 YELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCR---SSVARKLLHDCETKKGHNSLIRAGYGGWLLYTA  108 (629)
Q Consensus        32 ~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~---~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A  108 (629)
                      ...+++.++..+++|..           .+.+|.||||+|+.++   +.+++++|++    +|++++.+|..|.||||+|
T Consensus        20 ~~~~~~~~~~~~~in~~-----------kd~~G~TaLh~A~~~~~~~~~eivklLLs----~GAdin~kD~~G~TPLh~A   84 (672)
T PHA02730         20 YKKIKLEIETCHNLSKH-----------IDRRGNNALHCYVSNKCDTDIKIVRLLLS----RGVERLCRNNEGLTPLGVY   84 (672)
T ss_pred             HHHHHHHHHHhcchhhh-----------cCCCCCcHHHHHHHcCCcCcHHHHHHHHh----CCCCCcccCCCCCChHHHH
Confidence            45677778887787721           3467999999999986   5899999999    9999999999999999999


Q ss_pred             HHcC--CHHHHHHHHhcCCCc-cccCCCCCCCHHHHHHH-HcCCHHHHHHHHH-cCCCCccccCCCCchhhhhccchhHH
Q 048228          109 ASAG--DVRFVKELLQRDPLL-VFGEGEYGVTDILYAAA-RSKNSEVFRLLLD-NAVAPRCCLSSGGEFEEKLSDSYSVF  183 (629)
Q Consensus       109 ~~~g--~~~~v~~LL~~g~~~-~~~~d~~g~tpL~~AA~-~~g~~~iv~~Ll~-~Ga~~~~~~~~~~~~~~~~~~~~~~~  183 (629)
                      +..+  +.|+|++|++.|+.. ++..+..+.+||+.+++ ..++.+++++|++ .|++++....               .
T Consensus        85 a~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~---------------~  149 (672)
T PHA02730         85 SKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTN---------------Y  149 (672)
T ss_pred             HHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhh---------------h
Confidence            9977  799999999997642 35567778999998843 3789999999996 7788774421               1


Q ss_pred             hh-hccchHHHHHHhcCCHHHHHHHHhCCCCccc-------ccCCCCCcHHHHHHhc------CCcce--ecccCCCCcc
Q 048228          184 KW-EMMNRAVHAVARGGNLDILRQLLGDCENVLA-------YRDVQGSTILHSASGR------GQVEV--LIAKSPSLIS  247 (629)
Q Consensus       184 ~d-~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~-------~~d~~g~TpLh~A~~~------g~~~i--lL~~~gadin  247 (629)
                      ++ ..|.+|+++|...+++++|++|+++|++++.       ..+..+.|.||+++..      +..++  +|+.+|+++|
T Consensus       150 ~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN  229 (672)
T PHA02730        150 YIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIH  229 (672)
T ss_pred             hccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCC
Confidence            11 2477999999999999999999999999952       2233344566645443      34455  9999999999


Q ss_pred             ccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHc--------------------------------CCCCcchhhhc
Q 048228          248 VTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVS--------------------------------GKIVEVKDIIN  295 (629)
Q Consensus       248 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~--------------------------------~g~~d~~a~in  295 (629)
                      .+|..|+||||++....        .++.|++++|++                                +| +|    +.
T Consensus       230 ~kd~~G~TpLh~~~~~~--------~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d----~~  296 (672)
T PHA02730        230 GRDEGGSLPIQYYWSCS--------TIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYN-VD----ME  296 (672)
T ss_pred             CCCCCCCCHHHHHHHcC--------cccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCC-cc----hH
Confidence            99999999999643321        467999999999                                45 44    33


Q ss_pred             c--------------------CCcCCch---------------------HHHHHHHcC--CcHHHHHHHhcCCCCCcccC
Q 048228          296 V--------------------TNNNGRT---------------------ALHLAVSEN--IQCNLVELLMTVPSINLNIQ  332 (629)
Q Consensus       296 ~--------------------~d~~g~T---------------------pLh~A~~~~--~~~~iv~~Ll~~~gadvn~~  332 (629)
                      .                    .+..|.+                     .||.-...+  .+.+++++||+ +|||+|..
T Consensus       297 i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs-~GAdIN~k  375 (672)
T PHA02730        297 IVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLD-NGATMDKT  375 (672)
T ss_pred             HHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHH-CCCCCCcC
Confidence            3                    5566654                     677777755  47999999999 99999986


Q ss_pred             CCCCCcHHHHHHhCCCCchHHHHHHHHHHcCC--CCCCCCCCCccHHHHH---HHhCC-CCCCCCCCCChhhHHHHHHcC
Q 048228          333 DGEGMTPLDLLKQHPRSASSEILIKQLISAGG--ISNCQDNVARNAIACH---LKGQG-IGVSPGSSFRVPDAEIFLYTG  406 (629)
Q Consensus       333 d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Ga--dvn~~d~~G~TpL~~A---~~~~~-~~~~~~~~~~~~~v~~LL~~G  406 (629)
                       ..|.||||+|+..++...-.+++++|+++|+  ++|.+|..|+||||.+   ..... +.....  ...+++++|+.+|
T Consensus       376 -~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~--~~~~ivk~LIs~G  452 (672)
T PHA02730        376 -TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYET--ILIDVFDILSKYM  452 (672)
T ss_pred             -CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccch--hHHHHHHHHHhcc
Confidence             7999999999988752111339999999998  6999999999999853   22211 000000  0246799999999


Q ss_pred             CCCccccccCCChhhhh---------hhhccCCCCCCCCCCCC-CCCCcHHHHHH
Q 048228          407 IENASDAICDAASVEYS---------SCLSEQSDFDSSNTPDD-KKSSPIDYAAR  451 (629)
Q Consensus       407 ad~~~~d~~g~t~~~~a---------~~~~e~g~~~d~n~~~~-~~~~~~~~aa~  451 (629)
                      ||++.+|..|+||+++|         ..|++.|+  ++|..+. .|.+|+++|+.
T Consensus       453 ADINakD~~G~TPLh~Aa~~~~~eive~LI~~GA--dIN~~d~~~g~TaL~~Aa~  505 (672)
T PHA02730        453 DDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGA--SVNTTSRSIINTAIQKSSY  505 (672)
T ss_pred             cchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCC--CCCCCCCcCCcCHHHHHHH
Confidence            99999999999999998         45788999  9999996 69999999986


No 12 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.2e-43  Score=375.75  Aligned_cols=307  Identities=21%  Similarity=0.256  Sum_probs=279.4

Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcc
Q 048228           16 QWWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSL   95 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~   95 (629)
                      +-.|.||||+|+.....+.|+.|++.|+++...+            ..+.+|+|+|+..+.....++|++    +|+|+|
T Consensus        85 D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n------------~~~~aplh~A~~~~~~s~L~~Ll~----~~~dvn  148 (929)
T KOG0510|consen   85 DSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRN------------LNKNAPLHLAADSGNYSCLKLLLD----YGADVN  148 (929)
T ss_pred             hcccCchhHHHhhcchHHHHHHHHhcCCCCChhh------------hhccCchhhccccchHHHHHHHHH----hcCCcc
Confidence            3458899999999999999999999999987643            678999999999999999999999    899999


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHH-----cCCCCccccCCCC
Q 048228           96 IRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLD-----NAVAPRCCLSSGG  170 (629)
Q Consensus        96 ~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~-----~Ga~~~~~~~~~~  170 (629)
                      ..|..|.||||.||..++.|..+.|++.|++ +-..|.+|.+|+|.| ++.|..|+.++.+.     .+..+|.      
T Consensus       149 l~de~~~TpLh~A~~~~~~E~~k~Li~~~a~-~~K~~~~~~~~iH~a-a~s~s~e~mEi~l~~~g~~r~~~in~------  220 (929)
T KOG0510|consen  149 LEDENGFTPLHLAARKNKVEAKKELINKGAD-PCKSDIDGNFPIHEA-ARSGSKECMEIFLPEHGYERQTHINF------  220 (929)
T ss_pred             ccccCCCchhhHHHhcChHHHHHHHHhcCCC-CCcccCcCCchHHHH-HHhcchhhhhhhhccccchhhccccc------
Confidence            9999999999999999999998999999998 577899999999998 88899999999998     4444443      


Q ss_pred             chhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCccc--------------ccCCCCCcHHHHHHhcCCcc
Q 048228          171 EFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLA--------------YRDVQGSTILHSASGRGQVE  236 (629)
Q Consensus       171 ~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~--------------~~d~~g~TpLh~A~~~g~~~  236 (629)
                                   .+..|.+|||.|+..|++++++.+|+.|.....              -.|.+|.||||+|++.|+.+
T Consensus       221 -------------~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~  287 (929)
T KOG0510|consen  221 -------------DNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPE  287 (929)
T ss_pred             -------------ccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChh
Confidence                         345578999999999999999999998864322              15889999999999999999


Q ss_pred             e--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHc-CCCCcchhhhccCCcCCchHHHHHHHcCC
Q 048228          237 V--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVS-GKIVEVKDIINVTNNNGRTALHLAVSENI  313 (629)
Q Consensus       237 i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~-~g~~d~~a~in~~d~~g~TpLh~A~~~~~  313 (629)
                      .  +|+..|++++.++.++.||||.|++          +|+...|+.||+ .+.    ..+|..|..|+||||.|+..| 
T Consensus       288 svd~Ll~~Ga~I~~kn~d~~spLH~AA~----------yg~~ntv~rLL~~~~~----rllne~D~~g~tpLHlaa~~g-  352 (929)
T KOG0510|consen  288 SVDNLLGFGASINSKNKDEESPLHFAAI----------YGRINTVERLLQESDT----RLLNESDLHGMTPLHLAAKSG-  352 (929)
T ss_pred             HHHHHHHcCCcccccCCCCCCchHHHHH----------cccHHHHHHHHhCcCc----cccccccccCCCchhhhhhcC-
Confidence            9  8999999999999999999999999          699999999999 442    458999999999999999999 


Q ss_pred             cHHHHHHHhcCCCCCcc---cCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHH
Q 048228          314 QCNLVELLMTVPSINLN---IQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIAC  379 (629)
Q Consensus       314 ~~~iv~~Ll~~~gadvn---~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~  379 (629)
                      |..++++||+ .||+.+   ..|.+|.||||.|+..|+..    +|++|+.+||++..+|..|.+++++
T Consensus       353 H~~v~qlLl~-~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~----av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  353 HDRVVQLLLN-KGALFLNMSEADSDGNTALHLAAKYGNTS----AVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHHHHh-cChhhhcccccccCCchhhhHHHHhccHH----HHHHHHHcCCceeeccccccccccc
Confidence            9999999999 999988   56999999999999999988    9999999999999999999999974


No 13 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=3.8e-43  Score=385.60  Aligned_cols=295  Identities=19%  Similarity=0.175  Sum_probs=261.7

Q ss_pred             HHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcC---cHHHHHHHhhcccccCCCcccccCC
Q 048228           24 DFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCR---SSVARKLLHDCETKKGHNSLIRAGY  100 (629)
Q Consensus        24 h~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~---~~~i~~lL~~~~~~~g~~~~~~d~~  100 (629)
                      ..|+..++.++|++|+++|++++.++            ..|.||||+|+..+   ..+++++|++    .|++++.++..
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~------------~~g~t~Lh~a~~~~~~~~~~iv~~Ll~----~Gadin~~~~~   82 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRG------------EYGKTPLHLYLHYSSEKVKDIVRLLLE----AGADVNAPERC   82 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCC------------CCCCCHHHHHHHhcCCChHHHHHHHHH----CCCCCCCCCCC
Confidence            56788899999999999999998653            56899999999998   9999999999    99999999999


Q ss_pred             CChHHHHHHHcC-CHHHHHHHHhcCCCccccCCCCCCCHHHHHHH-HcCCHHHHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228          101 GGWLLYTAASAG-DVRFVKELLQRDPLLVFGEGEYGVTDILYAAA-RSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus       101 g~tpLh~A~~~g-~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~-~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      |.||||+|+..| +.+++++|+++|++ ++..|..|.||||+|+. ..++.+++++|+++|++++..+            
T Consensus        83 g~TpLh~A~~~~~~~~iv~lLl~~ga~-in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d------------  149 (471)
T PHA03095         83 GFTPLHLYLYNATTLDVIKLLIKAGAD-VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD------------  149 (471)
T ss_pred             CCCHHHHHHHcCCcHHHHHHHHHcCCC-CCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccC------------
Confidence            999999999999 59999999999998 68899999999999952 4568999999999999988553            


Q ss_pred             chhHHhhhccchHHHHHHhcC--CHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC--Ccce--ecccCCCCccccCCC
Q 048228          179 SYSVFKWEMMNRAVHAVARGG--NLDILRQLLGDCENVLAYRDVQGSTILHSASGRG--QVEV--LIAKSPSLISVTNSH  252 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g--~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g--~~~i--lL~~~gadin~~d~~  252 (629)
                             ..|.||||+|+..+  +.+++++|+++|++++. .|..|.||||+|+...  ..++  +|++.|++++.+|..
T Consensus       150 -------~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~-~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~  221 (471)
T PHA03095        150 -------LYGMTPLAVLLKSRNANVELLRLLIDAGADVYA-VDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDML  221 (471)
T ss_pred             -------CCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc-cCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCC
Confidence                   44789999999876  68999999999999997 6999999999999864  3444  788899999999999


Q ss_pred             CCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccC
Q 048228          253 GDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQ  332 (629)
Q Consensus       253 g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~  332 (629)
                      |+||||+|+..+        .....+++.|++.|     +++|.+|..|+||||+|+..| +.+++++||+ .|+|+|.+
T Consensus       222 g~tpLh~Aa~~~--------~~~~~~v~~ll~~g-----~din~~d~~g~TpLh~A~~~~-~~~~v~~LL~-~gad~n~~  286 (471)
T PHA03095        222 GNTPLHSMATGS--------SCKRSLVLPLLIAG-----ISINARNRYGQTPLHYAAVFN-NPRACRRLIA-LGADINAV  286 (471)
T ss_pred             CCCHHHHHHhcC--------CchHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHcC-CHHHHHHHHH-cCCCCccc
Confidence            999999999852        12347889999999     669999999999999999999 9999999999 99999999


Q ss_pred             CCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCc
Q 048228          333 DGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVAR  374 (629)
Q Consensus       333 d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~  374 (629)
                      |.+|.||||+|+..++.+    +++.|++.+++++..+....
T Consensus       287 ~~~g~tpl~~A~~~~~~~----~v~~LL~~~~~~~~~~~~~~  324 (471)
T PHA03095        287 SSDGNTPLSLMVRNNNGR----AVRAALAKNPSAETVAATLN  324 (471)
T ss_pred             CCCCCCHHHHHHHhCCHH----HHHHHHHhCCCHHHHHHHHH
Confidence            999999999999999988    99999999999876554433


No 14 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.5e-42  Score=380.79  Aligned_cols=290  Identities=19%  Similarity=0.183  Sum_probs=262.5

Q ss_pred             HHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcC---CHHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Q 048228           69 DDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAG---DVRFVKELLQRDPLLVFGEGEYGVTDILYAAAR  145 (629)
Q Consensus        69 h~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g---~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~  145 (629)
                      ..++.....+++++|++    +|++++.++..|.||||+|+..|   +.++|++|+++|++ ++..+..|.||||+| +.
T Consensus        19 ~~~~~~~~~~~v~~Ll~----~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-in~~~~~g~TpLh~A-~~   92 (471)
T PHA03095         19 LLNASNVTVEEVRRLLA----AGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPLHLY-LY   92 (471)
T ss_pred             HHcCCCCCHHHHHHHHH----cCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HH
Confidence            34556678899999999    99999999999999999999999   99999999999998 688899999999999 66


Q ss_pred             cC-CHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHH--hcCCHHHHHHHHhCCCCcccccCCCC
Q 048228          146 SK-NSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVA--RGGNLDILRQLLGDCENVLAYRDVQG  222 (629)
Q Consensus       146 ~g-~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~--~~g~~~iv~~Ll~~gad~~~~~d~~g  222 (629)
                      .+ +.+++++|+++|++++..+                   ..|+||||+|+  ..++.+++++|+++|++++. .|..|
T Consensus        93 ~~~~~~iv~lLl~~ga~in~~~-------------------~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~-~d~~g  152 (471)
T PHA03095         93 NATTLDVIKLLIKAGADVNAKD-------------------KVGRTPLHVYLSGFNINPKVIRLLLRKGADVNA-LDLYG  152 (471)
T ss_pred             cCCcHHHHHHHHHcCCCCCCCC-------------------CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCc-cCCCC
Confidence            67 6999999999999988654                   44789999999  56789999999999999996 99999


Q ss_pred             CcHHHHHHhcCCc--ce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCC
Q 048228          223 STILHSASGRGQV--EV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTN  298 (629)
Q Consensus       223 ~TpLh~A~~~g~~--~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d  298 (629)
                      .||||+|+..+..  ++  +|++.|++++..|..|+||||+|+...        .++.++++.|++.|     ++++.+|
T Consensus       153 ~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~--------~~~~~i~~~Ll~~g-----~~~~~~d  219 (471)
T PHA03095        153 MTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSF--------KPRARIVRELIRAG-----CDPAATD  219 (471)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHC--------CCcHHHHHHHHHcC-----CCCcccC
Confidence            9999999998754  33  888899999999999999999999742        37889999999999     6799999


Q ss_pred             cCCchHHHHHHHcCCcH--HHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccH
Q 048228          299 NNGRTALHLAVSENIQC--NLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNA  376 (629)
Q Consensus       299 ~~g~TpLh~A~~~~~~~--~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~Tp  376 (629)
                      ..|+||||+|+..+ +.  .+++.|++ .|+++|.+|..|+||||+|+..|+.+    ++++|+++|||+|.+|..|+||
T Consensus       220 ~~g~tpLh~Aa~~~-~~~~~~v~~ll~-~g~din~~d~~g~TpLh~A~~~~~~~----~v~~LL~~gad~n~~~~~g~tp  293 (471)
T PHA03095        220 MLGNTPLHSMATGS-SCKRSLVLPLLI-AGISINARNRYGQTPLHYAAVFNNPR----ACRRLIALGADINAVSSDGNTP  293 (471)
T ss_pred             CCCCCHHHHHHhcC-CchHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCcccCCCCCCH
Confidence            99999999999988 54  68999999 99999999999999999999999988    9999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCcccc
Q 048228          377 IACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDA  413 (629)
Q Consensus       377 L~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d  413 (629)
                      |++|+..+          +.+++++||++|++++..+
T Consensus       294 l~~A~~~~----------~~~~v~~LL~~~~~~~~~~  320 (471)
T PHA03095        294 LSLMVRNN----------NGRAVRAALAKNPSAETVA  320 (471)
T ss_pred             HHHHHHhC----------CHHHHHHHHHhCCCHHHHH
Confidence            99999987          6899999999999987544


No 15 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=9.6e-42  Score=369.76  Aligned_cols=291  Identities=19%  Similarity=0.219  Sum_probs=263.1

Q ss_pred             HHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc
Q 048228           67 QFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS  146 (629)
Q Consensus        67 ~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~  146 (629)
                      .|..|+..|+.++++.|++   ..+..++..+..|.||||.|+..|+.++|++|+++|++ ++..+..|.||||+| +..
T Consensus         4 ~l~~ai~~gd~~~v~~ll~---~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-~n~~~~~~~t~L~~A-~~~   78 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIK---NKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTA-IKI   78 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHH---cCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HHc
Confidence            5788999999999988876   24666888889999999999999999999999999998 577889999999998 788


Q ss_pred             CCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHH
Q 048228          147 KNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTIL  226 (629)
Q Consensus       147 g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpL  226 (629)
                      |+.+++++|+++|+++...                             ++...+.+++++|++.|++++. ++..|.|||
T Consensus        79 ~~~~iv~~Ll~~g~~~~~~-----------------------------~~~~~~~~~i~~ll~~g~d~n~-~~~~g~T~L  128 (434)
T PHA02874         79 GAHDIIKLLIDNGVDTSIL-----------------------------PIPCIEKDMIKTILDCGIDVNI-KDAELKTFL  128 (434)
T ss_pred             CCHHHHHHHHHCCCCCCcc-----------------------------hhccCCHHHHHHHHHCcCCCCC-CCCCCccHH
Confidence            9999999999999876422                             2234568999999999999995 999999999


Q ss_pred             HHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchH
Q 048228          227 HSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTA  304 (629)
Q Consensus       227 h~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~Tp  304 (629)
                      |+|+..|+.++  +|++.|++++.+|..|.||||+|+.          .++.+++++|++.|     ++++..+..|.||
T Consensus       129 h~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~----------~~~~~iv~~Ll~~g-----~~~n~~~~~g~tp  193 (434)
T PHA02874        129 HYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIK----------HNFFDIIKLLLEKG-----AYANVKDNNGESP  193 (434)
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHH----------CCcHHHHHHHHHCC-----CCCCCCCCCCCCH
Confidence            99999999998  8888999999999999999999999          59999999999999     6699999999999


Q ss_pred             HHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhC
Q 048228          305 LHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       305 Lh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~  384 (629)
                      ||+|+..+ +.+++++|++ .|++++.++..|.||||+|+..+. +    .+++|+ .|+++|.+|..|+||||+|+...
T Consensus       194 L~~A~~~g-~~~iv~~Ll~-~g~~i~~~~~~g~TpL~~A~~~~~-~----~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~  265 (434)
T PHA02874        194 LHNAAEYG-DYACIKLLID-HGNHIMNKCKNGFTPLHNAIIHNR-S----AIELLI-NNASINDQDIDGSTPLHHAINPP  265 (434)
T ss_pred             HHHHHHcC-CHHHHHHHHh-CCCCCcCCCCCCCCHHHHHHHCCh-H----HHHHHH-cCCCCCCcCCCCCCHHHHHHhcC
Confidence            99999999 9999999999 999999999999999999999865 2    566666 69999999999999999999865


Q ss_pred             CCCCCCCCCCChhhHHHHHHcCCCCccccccCCChhhhhh
Q 048228          385 GIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASVEYSS  424 (629)
Q Consensus       385 ~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a~  424 (629)
                      +         +.+++++|+++|+|++..|..|+||+++|.
T Consensus       266 ~---------~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~  296 (434)
T PHA02874        266 C---------DIDIIDILLYHKADISIKDNKGENPIDTAF  296 (434)
T ss_pred             C---------cHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence            3         579999999999999999999999999884


No 16 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.2e-41  Score=380.04  Aligned_cols=343  Identities=13%  Similarity=0.100  Sum_probs=271.7

Q ss_pred             CCCCCcHHHHHHHCCCHH----HHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccC
Q 048228           16 QWWYASPIDFAAANGHYE----LVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKG   91 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~----~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g   91 (629)
                      ++.|.||||+|+..|+.+    +|+.|++.+...+..              +..+++|+|+.+++.+++++|++    +|
T Consensus        65 ~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~--------------~~~~~~~~a~~~~~~e~vk~Ll~----~G  126 (661)
T PHA02917         65 NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNIN--------------DFNIFSYMKSKNVDVDLIKVLVE----HG  126 (661)
T ss_pred             CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCC--------------CcchHHHHHhhcCCHHHHHHHHH----cC
Confidence            567889999999999954    567888875444332              23367888999999999999999    99


Q ss_pred             CCcccccCCCChHHHHHH--HcCCHHHHHHHHhcCCCccccCC---CCC-----------CCHHHHHHHH----------
Q 048228           92 HNSLIRAGYGGWLLYTAA--SAGDVRFVKELLQRDPLLVFGEG---EYG-----------VTDILYAAAR----------  145 (629)
Q Consensus        92 ~~~~~~d~~g~tpLh~A~--~~g~~~~v~~LL~~g~~~~~~~d---~~g-----------~tpL~~AA~~----------  145 (629)
                      +|++.+|..|+||||.|+  ..|+.++|++||++|++. +..|   .+|           .||||+|+..          
T Consensus       127 adin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~v-n~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~  205 (661)
T PHA02917        127 FDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSV-LYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRA  205 (661)
T ss_pred             CCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCc-cccccccccccccccccccccccHHHHHHhhcccccccccc
Confidence            999999999999999654  578999999999999985 4333   344           5999999542          


Q ss_pred             cCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCH--HHHHHHHhCCCCccc---ccCC
Q 048228          146 SKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNL--DILRQLLGDCENVLA---YRDV  220 (629)
Q Consensus       146 ~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~--~iv~~Ll~~gad~~~---~~d~  220 (629)
                      .++.+++++|+++|++++..                   |..|+||||+|+..|+.  ++|++|++ |++++.   ..|.
T Consensus       206 ~~~~eiv~~Li~~Gadvn~~-------------------d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~  265 (661)
T PHA02917        206 YVRPEVVKCLINHGIKPSSI-------------------DKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDL  265 (661)
T ss_pred             cCcHHHHHHHHHCCCCcccC-------------------CCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCc
Confidence            46899999999999999865                   45588999999999985  79999985 887753   3567


Q ss_pred             CCCcHHHHHHhcC---------Ccce--ecccCCCCcc-------ccCC------------CCCchHHHHHhcCCCCCcc
Q 048228          221 QGSTILHSASGRG---------QVEV--LIAKSPSLIS-------VTNS------------HGDTFLHMVVAGFRSPGFR  270 (629)
Q Consensus       221 ~g~TpLh~A~~~g---------~~~i--lL~~~gadin-------~~d~------------~g~TpLh~A~~~~~~~~~~  270 (629)
                      .|.+|+|+|+..+         +.++  +|++.|++..       ..+.            .+.++||.+.....     
T Consensus       266 ~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----  340 (661)
T PHA02917        266 TCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMT-----  340 (661)
T ss_pred             ccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHH-----
Confidence            7899999998422         3333  7788888642       1122            23444444442100     


Q ss_pred             cccc--HHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCC
Q 048228          271 RVDH--QIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPR  348 (629)
Q Consensus       271 ~~~~--~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~  348 (629)
                        .+  ..+++++|++.|     |++|.++..|.|+.    ... +.+++++||...|++++..+.+|+||||.|++.+.
T Consensus       341 --~g~~~~~~v~~Ll~~G-----Advn~~~~~g~~~~----~~~-~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~  408 (661)
T PHA02917        341 --FGDIDIPLVECMLEYG-----AVVNKEAIHGYFRN----INI-DSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNY  408 (661)
T ss_pred             --cCCCcHHHHHHHHHcC-----CCCCCCCccccchh----hcC-CHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcc
Confidence              13  467999999999     77999999999865    245 78889888875799988888889999999985433


Q ss_pred             --------------Cch-----HHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCC
Q 048228          349 --------------SAS-----SEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIEN  409 (629)
Q Consensus       349 --------------~~~-----~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~  409 (629)
                                    .+.     ...++++|+++|||+|.+|..|+||||+|+..+          +.+++++|+++|+|+
T Consensus       409 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~----------~~~~v~~Ll~~GAdi  478 (661)
T PHA02917        409 GCYNFYTYTYKKGLCDMSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYN----------KQSLVSLLLESGSDV  478 (661)
T ss_pred             cchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcC----------CHHHHHHHHHCcCCC
Confidence                          222     245789999999999999999999999999876          589999999999999


Q ss_pred             ccccccCCChhhhhh
Q 048228          410 ASDAICDAASVEYSS  424 (629)
Q Consensus       410 ~~~d~~g~t~~~~a~  424 (629)
                      +..+..|+|+++++.
T Consensus       479 n~~d~~G~T~L~~A~  493 (661)
T PHA02917        479 NIRSNNGYTCIAIAI  493 (661)
T ss_pred             CCCCCCCCCHHHHHH
Confidence            999999999999985


No 17 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=3.6e-43  Score=395.11  Aligned_cols=385  Identities=22%  Similarity=0.252  Sum_probs=277.1

Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcc
Q 048228           16 QWWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSL   95 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~   95 (629)
                      +..|-||||.||..|++++|.+|+.+|+.++..+            ..+.||+|.|++.+..++.++|++    .|+++.
T Consensus       239 d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~~------------vr~~tplh~AA~~~~~e~~~~ll~----~ga~~~  302 (1143)
T KOG4177|consen  239 DESGLTPLHVAAFMGHLDIVKLLLQHGASVNVST------------VRGETPLHMAARAGQVEVCKLLLQ----NGADVL  302 (1143)
T ss_pred             cccCccHHHHHHhccchhHHHHHHhcccccCccc------------ccccCcchhhhccchhhhHhhhhc----cCcccc
Confidence            4457799999999999999999999999988643            668899999999999999999988    888888


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC-----
Q 048228           96 IRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGG-----  170 (629)
Q Consensus        96 ~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~-----  170 (629)
                      ..+....||||.|...|+.++++++++.++. .+..+..|.||+|++ +..++.++..+|.+.+..-......+.     
T Consensus       303 ~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~-~~aar~~g~t~lHla-a~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~l  380 (1143)
T KOG4177|consen  303 AKARDDQTPLHIASRLGHEEIVHLLLQAGAT-PNAARTAGYTPLHLA-AKEGQVEVAGALLEHGAQRRQAEEKGFTPLHL  380 (1143)
T ss_pred             cccccccChhhhhcccchHHHHHHHhhccCC-ccccCcCCcccccHh-hhhhhHHHHHHhhccccccCcccccCCcchhh
Confidence            8888888888888888888888888888776 466677777777776 444666666666665554432221100     


Q ss_pred             -------chhhhh--ccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC-Ccce--e
Q 048228          171 -------EFEEKL--SDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRG-QVEV--L  238 (629)
Q Consensus       171 -------~~~~~~--~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g-~~~i--l  238 (629)
                             .....+  .....+.+...|.||||.|+..++..+|+.++++|++.+. .+..|.||+|+|+..| +.++  +
T Consensus       381 a~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~-~~~lG~T~lhvaa~~g~~~~~~~~  459 (1143)
T KOG4177|consen  381 AVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNA-KAKLGYTPLHVAAKKGRYLQIARL  459 (1143)
T ss_pred             hcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhh-HhhcCCChhhhhhhcccHhhhhhh
Confidence                   000000  0000112223344555555555555555555555555553 5555555555555555 3333  4


Q ss_pred             cccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHH
Q 048228          239 IAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLV  318 (629)
Q Consensus       239 L~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv  318 (629)
                      +.+.|+++|..-..|.||||.|+.          .|+.++++.|++.+     +..+.....|-|+||.|...+ ...++
T Consensus       460 l~~~g~~~n~~s~~G~T~Lhlaaq----------~Gh~~~~~llle~~-----~~~~~~~~~~l~~lhla~~~~-~v~~~  523 (1143)
T KOG4177|consen  460 LLQYGADPNAVSKQGFTPLHLAAQ----------EGHTEVVQLLLEGG-----ANDNLDAKKGLTPLHLAADED-TVKVA  523 (1143)
T ss_pred             HhhcCCCcchhccccCcchhhhhc----------cCCchHHHHhhhcC-----CccCccchhccchhhhhhhhh-hHHHH
Confidence            555555555555555555555555          57777777777777     446667777778888888877 88888


Q ss_pred             HHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhh
Q 048228          319 ELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPD  398 (629)
Q Consensus       319 ~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~  398 (629)
                      +.+++ +|++++.++..|.||||+|+.+|+.+    +|++||++|||++.+++.|+||||.|+..+          +.+|
T Consensus       524 ~~l~~-~ga~v~~~~~r~~TpLh~A~~~g~v~----~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G----------~~~i  588 (1143)
T KOG4177|consen  524 KILLE-HGANVDLRTGRGYTPLHVAVHYGNVD----LVKFLLEHGADVNAKDKLGYTPLHQAAQQG----------HNDI  588 (1143)
T ss_pred             HHHhh-cCCceehhcccccchHHHHHhcCCch----HHHHhhhCCccccccCCCCCChhhHHHHcC----------hHHH
Confidence            88888 89999999999999999999999999    999999999999999999999999999887          5899


Q ss_pred             HHHHHHcCCCCccccccCCChhhhhhh---------hccCCC---CCCCCCCCCCCCCcHHHHH
Q 048228          399 AEIFLYTGIENASDAICDAASVEYSSC---------LSEQSD---FDSSNTPDDKKSSPIDYAA  450 (629)
Q Consensus       399 v~~LL~~Gad~~~~d~~g~t~~~~a~~---------~~e~g~---~~d~n~~~~~~~~~~~~aa  450 (629)
                      +++|+++||++|..|..|.|++.++..         +...++   ..++.....+|.+|...+.
T Consensus       589 ~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e  652 (1143)
T KOG4177|consen  589 AELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAE  652 (1143)
T ss_pred             HHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHH
Confidence            999999999999999999999998843         333444   1225666778888876543


No 18 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=3.7e-42  Score=387.02  Aligned_cols=386  Identities=22%  Similarity=0.220  Sum_probs=349.9

Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcc
Q 048228           16 QWWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSL   95 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~   95 (629)
                      +-.|.||||+||..+..+++++|+.+|+++..++            ..+.||||.|+..|+..++.+|+.    +|+.++
T Consensus       206 ~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d------------~~gl~~lh~a~~~g~~~i~~~l~~----~ga~~~  269 (1143)
T KOG4177|consen  206 ALNGFTPLHIACKKNRIKVVELLLKHGADVSAKD------------ESGLTPLHVAAFMGHLDIVKLLLQ----HGASVN  269 (1143)
T ss_pred             ccCCCCchhhhccccccceeeeeeeccCcCCccc------------ccCccHHHHHHhccchhHHHHHHh----cccccC
Confidence            3356799999999999999999999999998765            679999999999999999999999    999999


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCch---
Q 048228           96 IRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEF---  172 (629)
Q Consensus        96 ~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~---  172 (629)
                      ..+-.|.||||.||..+..+++++|+++|++ +...+....||+|.| .+.|+.++++++++.|+.++.....+...   
T Consensus       270 ~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~-~~~~~~~~kt~l~~a-~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHl  347 (1143)
T KOG4177|consen  270 VSTVRGETPLHMAARAGQVEVCKLLLQNGAD-VLAKARDDQTPLHIA-SRLGHEEIVHLLLQAGATPNAARTAGYTPLHL  347 (1143)
T ss_pred             cccccccCcchhhhccchhhhHhhhhccCcc-cccccccccChhhhh-cccchHHHHHHHhhccCCccccCcCCcccccH
Confidence            9999999999999999999999999999998 588899999999998 88899999999999999998665544111   


Q ss_pred             ---------hhhhcc--chhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ec
Q 048228          173 ---------EEKLSD--SYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LI  239 (629)
Q Consensus       173 ---------~~~~~~--~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL  239 (629)
                               ...+..  .....-++.|.+|+|.|+..|..+++++++.+|++++. ..+.|.||||.|+..++..+  ++
T Consensus       348 aa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~-~gk~gvTplh~aa~~~~~~~v~l~  426 (1143)
T KOG4177|consen  348 AAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNS-AGKNGVTPLHVAAHYGNPRVVKLL  426 (1143)
T ss_pred             hhhhhhHHHHHHhhccccccCcccccCCcchhhhcccCchhHHHhhhhccCCccc-CCCCCcceeeehhhccCcceEEEE
Confidence                     111110  11112356789999999999999999999999999985 99999999999999999999  78


Q ss_pred             ccCCCCccccCCCCCchHHHHHhcCCCCCcccccc-HHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHH
Q 048228          240 AKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDH-QIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLV  318 (629)
Q Consensus       240 ~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~-~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv  318 (629)
                      .+.|++++..+..|+||+|+|+..          + ..++...+++.+     +++|..-..|.||||.|+..| +.+++
T Consensus       427 l~~gA~~~~~~~lG~T~lhvaa~~----------g~~~~~~~~l~~~g-----~~~n~~s~~G~T~Lhlaaq~G-h~~~~  490 (1143)
T KOG4177|consen  427 LKRGASPNAKAKLGYTPLHVAAKK----------GRYLQIARLLLQYG-----ADPNAVSKQGFTPLHLAAQEG-HTEVV  490 (1143)
T ss_pred             eccCCChhhHhhcCCChhhhhhhc----------ccHhhhhhhHhhcC-----CCcchhccccCcchhhhhccC-CchHH
Confidence            889999999999999999999994          6 899999999999     679999999999999999999 99999


Q ss_pred             HHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhh
Q 048228          319 ELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPD  398 (629)
Q Consensus       319 ~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~  398 (629)
                      ..|++ .++..+.....|.|+||+|...+...    .++.++++|++++.++..|.||||.|+..+          ++++
T Consensus       491 ~llle-~~~~~~~~~~~~l~~lhla~~~~~v~----~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g----------~v~~  555 (1143)
T KOG4177|consen  491 QLLLE-GGANDNLDAKKGLTPLHLAADEDTVK----VAKILLEHGANVDLRTGRGYTPLHVAVHYG----------NVDL  555 (1143)
T ss_pred             HHhhh-cCCccCccchhccchhhhhhhhhhHH----HHHHHhhcCCceehhcccccchHHHHHhcC----------CchH
Confidence            99999 89999999999999999999999988    899999999999999999999999999988          6999


Q ss_pred             HHHHHHcCCCCccccccCCChhhhh---------hhhccCCCCCCCCCCCCCCCCcHHHHHHHH
Q 048228          399 AEIFLYTGIENASDAICDAASVEYS---------SCLSEQSDFDSSNTPDDKKSSPIDYAARRL  453 (629)
Q Consensus       399 v~~LL~~Gad~~~~d~~g~t~~~~a---------~~~~e~g~~~d~n~~~~~~~~~~~~aa~~l  453 (629)
                      |++||++|||++.+++.|+||++.|         ..|.++|+  ++|..|.+|.+|+++|++..
T Consensus       556 VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA--~vna~d~~g~TpL~iA~~lg  617 (1143)
T KOG4177|consen  556 VKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGA--SVNAADLDGFTPLHIAVRLG  617 (1143)
T ss_pred             HHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCC--CCCcccccCcchhHHHHHhc
Confidence            9999999999999999999999988         45889999  99999999999999998663


No 19 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4e-41  Score=370.41  Aligned_cols=280  Identities=20%  Similarity=0.223  Sum_probs=255.0

Q ss_pred             HHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHH-----HHHHcCCHHH
Q 048228           77 SVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILY-----AAARSKNSEV  151 (629)
Q Consensus        77 ~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~-----AA~~~g~~~i  151 (629)
                      ..+++.+++    .+...+..+..+.||||.|+..|+.++|++|+++|++ ++..+..|.||||+     | +..++.++
T Consensus        15 ~~~~~~~~~----~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~-~~~~~~~~~t~L~~~~~~~a-~~~~~~~i   88 (480)
T PHA03100         15 VKNIKYIIM----EDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGAD-INSSTKNNSTPLHYLSNIKY-NLTDVKEI   88 (480)
T ss_pred             HHHHHHHHh----cCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCC-CCCccccCcCHHHHHHHHHH-HhhchHHH
Confidence            345556665    5666667788899999999999999999999999988 57788899999999     8 77899999


Q ss_pred             HHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHH--hcCCHHHHHHHHhCCCCcccccCCCCCcHHHHH
Q 048228          152 FRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVA--RGGNLDILRQLLGDCENVLAYRDVQGSTILHSA  229 (629)
Q Consensus       152 v~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~--~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A  229 (629)
                      +++|+++|++++..                   +..|.||||+|+  ..|+.++|++|+++|++++. .+..|.||||+|
T Consensus        89 v~~Ll~~ga~i~~~-------------------d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A  148 (480)
T PHA03100         89 VKLLLEYGANVNAP-------------------DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNI-KNSDGENLLHLY  148 (480)
T ss_pred             HHHHHHCCCCCCCC-------------------CCCCCchhhHHHhcccChHHHHHHHHHcCCCCCc-cCCCCCcHHHHH
Confidence            99999999988654                   345789999999  99999999999999999985 999999999999


Q ss_pred             HhcC--Ccce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCC----
Q 048228          230 SGRG--QVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNG----  301 (629)
Q Consensus       230 ~~~g--~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g----  301 (629)
                      +..+  +.++  +|++.|++++.+|..|.||||+|+.          .++.+++++|+++|     ++++..+..|    
T Consensus       149 ~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~----------~~~~~iv~~Ll~~g-----a~~~~~~~~~~~~~  213 (480)
T PHA03100        149 LESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVE----------KGNIDVIKFLLDNG-----ADINAGDIETLLFT  213 (480)
T ss_pred             HHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHH----------hCCHHHHHHHHHcC-----CCccCCCCCCCcHH
Confidence            9999  7777  8888999999999999999999999          58999999999999     6799999999    


Q ss_pred             --chHHHHHHHcCCc--HHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHH
Q 048228          302 --RTALHLAVSENIQ--CNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAI  377 (629)
Q Consensus       302 --~TpLh~A~~~~~~--~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL  377 (629)
                        .||||+|+..+ +  .+++++|++ .|+++|.+|..|.||||+|+..++.+    ++++|+++|+|+|.+|..|.|||
T Consensus       214 ~~~t~l~~a~~~~-~~~~~iv~~Ll~-~g~din~~d~~g~TpL~~A~~~~~~~----iv~~Ll~~gad~n~~d~~g~tpl  287 (480)
T PHA03100        214 IFETPLHIAACYN-EITLEVVNYLLS-YGVPINIKDVYGFTPLHYAVYNNNPE----FVKYLLDLGANPNLVNKYGDTPL  287 (480)
T ss_pred             HHHhHHHHHHHhC-cCcHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCCccCCCCCcHH
Confidence              99999999999 8  999999999 99999999999999999999999987    99999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCcccc
Q 048228          378 ACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDA  413 (629)
Q Consensus       378 ~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d  413 (629)
                      ++|+..+          +.+++++|+++|++++..+
T Consensus       288 ~~A~~~~----------~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        288 HIAILNN----------NKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             HHHHHhC----------CHHHHHHHHhcCCCHHHHH
Confidence            9999876          6899999999999988644


No 20 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.7e-40  Score=363.86  Aligned_cols=283  Identities=22%  Similarity=0.219  Sum_probs=260.8

Q ss_pred             CCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHH-
Q 048228           29 NGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYT-  107 (629)
Q Consensus        29 ~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~-  107 (629)
                      ....++++++++.+-..+.            ..+.+.||||.|+..++.+++++|++    +|++++..+..|.||||+ 
T Consensus        12 ~~~~~~~~~~~~~~~~~~~------------~~~~~~t~L~~A~~~~~~~ivk~Ll~----~g~~~~~~~~~~~t~L~~~   75 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDY------------SYKKPVLPLYLAKEARNIDVVKILLD----NGADINSSTKNNSTPLHYL   75 (480)
T ss_pred             HHHHHHHHHHHhcCccchh------------hhcccchhhhhhhccCCHHHHHHHHH----cCCCCCCccccCcCHHHHH
Confidence            3456888999987744433            34689999999999999999999999    999999999999999999 


Q ss_pred             ----HHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHH--HcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchh
Q 048228          108 ----AASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAA--RSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYS  181 (629)
Q Consensus       108 ----A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~--~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~  181 (629)
                          |+..|+.+++++|+++|++. +..|..|.||||+| +  ..|+.+++++|+++|++++..+               
T Consensus        76 ~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~A-~~~~~~~~~iv~~Ll~~g~~~~~~~---------------  138 (480)
T PHA03100         76 SNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLYA-ISKKSNSYSIVEYLLDNGANVNIKN---------------  138 (480)
T ss_pred             HHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhHH-HhcccChHHHHHHHHHcCCCCCccC---------------
Confidence                99999999999999999995 88999999999999 6  8899999999999999887553               


Q ss_pred             HHhhhccchHHHHHHhcC--CHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCC----
Q 048228          182 VFKWEMMNRAVHAVARGG--NLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHG----  253 (629)
Q Consensus       182 ~~~d~~g~t~Lh~A~~~g--~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g----  253 (629)
                          ..|.||||+|+..|  +.+++++|+++|++++. .+..|.||||+|+..|+.++  +|++.|++++..+..|    
T Consensus       139 ----~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~-~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~  213 (480)
T PHA03100        139 ----SDGENLLHLYLESNKIDLKILKLLIDKGVDINA-KNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFT  213 (480)
T ss_pred             ----CCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc-ccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHH
Confidence                44789999999999  99999999999999996 88999999999999999998  8889999999999999    


Q ss_pred             --CchHHHHHhcCCCCCccccccH--HHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCc
Q 048228          254 --DTFLHMVVAGFRSPGFRRVDHQ--IQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINL  329 (629)
Q Consensus       254 --~TpLh~A~~~~~~~~~~~~~~~--~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadv  329 (629)
                        .||||+|+.          .++  .+++++|++.|     +++|.+|..|.||||+|+..+ +.+++++|++ .|+|+
T Consensus       214 ~~~t~l~~a~~----------~~~~~~~iv~~Ll~~g-----~din~~d~~g~TpL~~A~~~~-~~~iv~~Ll~-~gad~  276 (480)
T PHA03100        214 IFETPLHIAAC----------YNEITLEVVNYLLSYG-----VPINIKDVYGFTPLHYAVYNN-NPEFVKYLLD-LGANP  276 (480)
T ss_pred             HHHhHHHHHHH----------hCcCcHHHHHHHHHcC-----CCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHH-cCCCC
Confidence              999999999          478  99999999999     669999999999999999999 9999999999 99999


Q ss_pred             ccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCC
Q 048228          330 NIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQD  370 (629)
Q Consensus       330 n~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d  370 (629)
                      |.+|..|.||||+|+..++.+    ++++|+++|++++..+
T Consensus       277 n~~d~~g~tpl~~A~~~~~~~----iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        277 NLVNKYGDTPLHIAILNNNKE----IFKLLLNNGPSIKTII  313 (480)
T ss_pred             CccCCCCCcHHHHHHHhCCHH----HHHHHHhcCCCHHHHH
Confidence            999999999999999999988    9999999999988654


No 21 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.6e-40  Score=358.62  Aligned_cols=295  Identities=17%  Similarity=0.171  Sum_probs=248.0

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHH
Q 048228           62 WDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILY  141 (629)
Q Consensus        62 ~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~  141 (629)
                      ..+.||||+|+..|+.+++++|++    .|++++.+|..|.||||+||..|+.+++++|++.+....   ...+.+|++.
T Consensus        35 ~~~~tPLh~A~~~g~~e~vk~Ll~----~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~---~~~~~~~l~~  107 (477)
T PHA02878         35 LIPFIPLHQAVEARNLDVVKSLLT----RGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS---VFYTLVAIKD  107 (477)
T ss_pred             ccCcchHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhccc---cccchhhHHH
Confidence            468899999999999999999999    999999999999999999999999999999999876532   2567899999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcC--CHHHHHHHHhCCCCcccccC
Q 048228          142 AAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGG--NLDILRQLLGDCENVLAYRD  219 (629)
Q Consensus       142 AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g--~~~iv~~Ll~~gad~~~~~d  219 (629)
                      | +..++.+++++|+..+++......                     ...+..+...+  +.+++++|+++|++++. .+
T Consensus       108 a-~~~~~~ei~~~Ll~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~iv~~Ll~~gadin~-~~  164 (477)
T PHA02878        108 A-FNNRNVEIFKIILTNRYKNIQTID---------------------LVYIDKKSKDDIIEAEITKLLLSYGADINM-KD  164 (477)
T ss_pred             H-HHcCCHHHHHHHHhCcccCcccCc---------------------HHHHhhccchhhHHHHHHHHHHHcCCCCCc-cC
Confidence            8 778999999999998754332110                     01111111122  35699999999999996 78


Q ss_pred             CC-CCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhcc
Q 048228          220 VQ-GSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINV  296 (629)
Q Consensus       220 ~~-g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~  296 (629)
                      .. |.||||+|+..|+.++  +|++.|++++..|..|.||||+|+.          .++.+++++|++.|     +++|.
T Consensus       165 ~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~----------~~~~~iv~~Ll~~g-----a~in~  229 (477)
T PHA02878        165 RHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVK----------HYNKPIVHILLENG-----ASTDA  229 (477)
T ss_pred             CCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH----------hCCHHHHHHHHHcC-----CCCCC
Confidence            77 9999999999999999  8888999999999999999999999          59999999999999     67999


Q ss_pred             CCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC-CCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCcc
Q 048228          297 TNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG-EGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARN  375 (629)
Q Consensus       297 ~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~-~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~T  375 (629)
                      +|..|+||||+|+..+.+.+++++|++ +|+++|.++. .|.||||+|+  ++.+    ++++|+++|+|+|.+|..|+|
T Consensus       230 ~d~~g~TpLh~A~~~~~~~~iv~~Ll~-~gadvn~~~~~~g~TpLh~A~--~~~~----~v~~Ll~~gadin~~d~~g~T  302 (477)
T PHA02878        230 RDKCGNTPLHISVGYCKDYDILKLLLE-HGVDVNAKSYILGLTALHSSI--KSER----KLKLLLEYGADINSLNSYKLT  302 (477)
T ss_pred             CCCCCCCHHHHHHHhcCCHHHHHHHHH-cCCCCCccCCCCCCCHHHHHc--cCHH----HHHHHHHCCCCCCCcCCCCCC
Confidence            999999999999976338999999999 9999999986 7999999994  3333    899999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCChhhHHHHHHcC-----CCCccccccCC
Q 048228          376 AIACHLKGQGIGVSPGSSFRVPDAEIFLYTG-----IENASDAICDA  417 (629)
Q Consensus       376 pL~~A~~~~~~~~~~~~~~~~~~v~~LL~~G-----ad~~~~d~~g~  417 (629)
                      |||+|+....         ..+++++|+.++     ++++..+..|.
T Consensus       303 pL~~A~~~~~---------~~~~~~~li~~~~~~~~~~~~~~~~~g~  340 (477)
T PHA02878        303 PLSSAVKQYL---------CINIGRILISNICLLKRIKPDIKNSEGF  340 (477)
T ss_pred             HHHHHHHHcC---------ccchHHHHHHHHHHHHhccCcccCcHHH
Confidence            9999997532         356777777653     45555554443


No 22 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=5e-40  Score=360.46  Aligned_cols=307  Identities=17%  Similarity=0.113  Sum_probs=251.3

Q ss_pred             CCCCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcc
Q 048228           16 QWWYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSL   95 (629)
Q Consensus        16 ~~~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~   95 (629)
                      ..++.||||+||..|+.++|++||+.|++++.++            .+|.||||+||..++.++++.|++    .+.+..
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d------------~~g~TpLh~A~~~g~~~~v~~Ll~----~~~~~~   97 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPD------------HRDLTPLHIICKEPNKLGMKEMIR----SINKCS   97 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC------------CCCCCHHHHHHHCccHhHHHHHHH----HHhccc
Confidence            4578899999999999999999999999998754            679999999999999999999988    444443


Q ss_pred             cccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc--CCHHHHHHHHHcCCCCccccCCCCchh
Q 048228           96 IRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS--KNSEVFRLLLDNAVAPRCCLSSGGEFE  173 (629)
Q Consensus        96 ~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~--g~~~iv~~Ll~~Ga~~~~~~~~~~~~~  173 (629)
                      .  .++.++|+.|+..|+.+++++|+..+.......+.   ..+... ...  .+.+++++|+++|++++..+       
T Consensus        98 ~--~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~---~~~~~~-~~~~~~~~~iv~~Ll~~gadin~~~-------  164 (477)
T PHA02878         98 V--FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDL---VYIDKK-SKDDIIEAEITKLLLSYGADINMKD-------  164 (477)
T ss_pred             c--ccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcH---HHHhhc-cchhhHHHHHHHHHHHcCCCCCccC-------
Confidence            3  56789999999999999999999886442211110   111111 111  23569999999999998653       


Q ss_pred             hhhccchhHHhhhc-cchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccC
Q 048228          174 EKLSDSYSVFKWEM-MNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTN  250 (629)
Q Consensus       174 ~~~~~~~~~~~d~~-g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d  250 (629)
                                  .. |.||||+|+..|+.+++++|+++|++++. .|..|.||||+|+..++.++  +|++.|++++.+|
T Consensus       165 ------------~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~-~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d  231 (477)
T PHA02878        165 ------------RHKGNTALHYATENKDQRLTELLLSYGANVNI-PDKTNNSPLHHAVKHYNKPIVHILLENGASTDARD  231 (477)
T ss_pred             ------------CCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCC-cCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCC
Confidence                        33 78999999999999999999999999995 99999999999999999999  8889999999999


Q ss_pred             CCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCc-CCchHHHHHHHcCCcHHHHHHHhcCCCCCc
Q 048228          251 SHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNN-NGRTALHLAVSENIQCNLVELLMTVPSINL  329 (629)
Q Consensus       251 ~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~-~g~TpLh~A~~~~~~~~iv~~Ll~~~gadv  329 (629)
                      ..|+||||+|+..         .++.+++++|+++|     +++|.++. .|.||||+|  .+ +.+++++|++ +|+|+
T Consensus       232 ~~g~TpLh~A~~~---------~~~~~iv~~Ll~~g-----advn~~~~~~g~TpLh~A--~~-~~~~v~~Ll~-~gadi  293 (477)
T PHA02878        232 KCGNTPLHISVGY---------CKDYDILKLLLEHG-----VDVNAKSYILGLTALHSS--IK-SERKLKLLLE-YGADI  293 (477)
T ss_pred             CCCCCHHHHHHHh---------cCCHHHHHHHHHcC-----CCCCccCCCCCCCHHHHH--cc-CHHHHHHHHH-CCCCC
Confidence            9999999999974         36899999999999     67999886 799999999  35 7899999999 99999


Q ss_pred             ccCCCCCCcHHHHHHhCC-CCchHHHHHHH-HHHcCCCCCCCCCCCccHHHHHHH
Q 048228          330 NIQDGEGMTPLDLLKQHP-RSASSEILIKQ-LISAGGISNCQDNVARNAIACHLK  382 (629)
Q Consensus       330 n~~d~~G~TpLh~A~~~~-~~~~~~~lv~~-Ll~~Gadvn~~d~~G~TpL~~A~~  382 (629)
                      |.+|..|.||||+|+..+ ..+..+.++.. .+..+.+.+.++..|.++-..++.
T Consensus       294 n~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~i~  348 (477)
T PHA02878        294 NSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDNMDCIT  348 (477)
T ss_pred             CCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHHHHHHh
Confidence            999999999999999854 34433322222 234467888888888877655554


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.4e-38  Score=350.25  Aligned_cols=282  Identities=17%  Similarity=0.149  Sum_probs=241.2

Q ss_pred             CcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHc--CCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc------
Q 048228           75 RSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASA--GDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS------  146 (629)
Q Consensus        75 ~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~--g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~------  146 (629)
                      ...+++++|++    +|+|+|.. ..|.||||.++..  ++.++|++||++|++ ++.++ .+.||||.| +..      
T Consensus        14 ~~~~~v~~LL~----~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAd-vn~~~-~~~tpL~~a-~~~~~~~~~   85 (494)
T PHA02989         14 VDKNALEFLLR----TGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGAD-VNYKG-YIETPLCAV-LRNREITSN   85 (494)
T ss_pred             CcHHHHHHHHH----cCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCC-ccCCC-CCCCcHHHH-HhccCcchh
Confidence            67899999999    99999998 6799998876654  378999999999998 46665 579999987 443      


Q ss_pred             CCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhc---CCHHHHHHHHhCCCCcccccCCCCC
Q 048228          147 KNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARG---GNLDILRQLLGDCENVLAYRDVQGS  223 (629)
Q Consensus       147 g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~---g~~~iv~~Ll~~gad~~~~~d~~g~  223 (629)
                      ++.+++++|+++||+++..+                   ..|.||||.|+..   ++.++|++|+++|+|++...|..|.
T Consensus        86 ~~~~iv~~Ll~~Gadin~~d-------------------~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~  146 (494)
T PHA02989         86 KIKKIVKLLLKFGADINLKT-------------------FNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGY  146 (494)
T ss_pred             hHHHHHHHHHHCCCCCCCCC-------------------CCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCC
Confidence            45789999999999998654                   4478999988765   6899999999999999435999999


Q ss_pred             cHHHHHHhcC--Ccce--ecccCCCCccc-cCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCC
Q 048228          224 TILHSASGRG--QVEV--LIAKSPSLISV-TNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTN  298 (629)
Q Consensus       224 TpLh~A~~~g--~~~i--lL~~~gadin~-~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d  298 (629)
                      ||||+|+..+  +.++  +|++.|++++. .+..|.||||+|+.....      .++.+++++|++.|     +++|.+|
T Consensus       147 tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~------~~~~~iv~~Ll~~G-----a~vn~~~  215 (494)
T PHA02989        147 NLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDID------VISIKVIKYLIKKG-----VNIETNN  215 (494)
T ss_pred             CHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccc------cccHHHHHHHHhCC-----CCccccC
Confidence            9999998754  5566  88899999998 688999999999874211      25899999999999     6799999


Q ss_pred             cCCchHHHHHHHcC-----CcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCC
Q 048228          299 NNGRTALHLAVSEN-----IQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVA  373 (629)
Q Consensus       299 ~~g~TpLh~A~~~~-----~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G  373 (629)
                      ..|.|+||.++..+     ...+++++|+.  |+++|.+|..|+||||+|+..++.+    ++++|+++|+|+|.+|..|
T Consensus       216 ~~~~t~l~~~~~~~~~~~~~~~~il~~l~~--~advn~~d~~G~TpL~~Aa~~~~~~----~v~~LL~~Gadin~~d~~G  289 (494)
T PHA02989        216 NGSESVLESFLDNNKILSKKEFKVLNFILK--YIKINKKDKKGFNPLLISAKVDNYE----AFNYLLKLGDDIYNVSKDG  289 (494)
T ss_pred             CccccHHHHHHHhchhhcccchHHHHHHHh--CCCCCCCCCCCCCHHHHHHHhcCHH----HHHHHHHcCCCccccCCCC
Confidence            99999999877543     15788888776  7999999999999999999999988    9999999999999999999


Q ss_pred             ccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCc
Q 048228          374 RNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENA  410 (629)
Q Consensus       374 ~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~  410 (629)
                      +||||+|+..+          +.++++.||+.+...+
T Consensus       290 ~TpL~~A~~~~----------~~~iv~~LL~~~p~~~  316 (494)
T PHA02989        290 DTVLTYAIKHG----------NIDMLNRILQLKPGKY  316 (494)
T ss_pred             CCHHHHHHHcC----------CHHHHHHHHhcCCChH
Confidence            99999999987          6899999999886554


No 24 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-38  Score=351.06  Aligned_cols=283  Identities=15%  Similarity=0.129  Sum_probs=241.0

Q ss_pred             CCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHh-c-CcHHHHHHHhhcccccCCCcccccCCCChHHH
Q 048228           29 NGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAK-C-RSSVARKLLHDCETKKGHNSLIRAGYGGWLLY  106 (629)
Q Consensus        29 ~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~-~-~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh  106 (629)
                      ..+.++|++||++|+|+|..             ..|.||||.++. . ++.+++++|++    +|+++|.++ .+.||||
T Consensus        13 ~~~~~~v~~LL~~GadvN~~-------------~~g~t~l~~~~~~~~~~~~iv~~Ll~----~GAdvn~~~-~~~tpL~   74 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE-------------YRGNSILLLYLKRKDVKIKIVKLLID----NGADVNYKG-YIETPLC   74 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc-------------cCCCCHHHHHHhcCCCChHHHHHHHH----cCCCccCCC-CCCCcHH
Confidence            58899999999999999863             468888876554 3 47899999999    999999886 6799999


Q ss_pred             HHHHcC------CHHHHHHHHhcCCCccccCCCCCCCHHHHHHH--HcCCHHHHHHHHHcCCCC-ccccCCCCchhhhhc
Q 048228          107 TAASAG------DVRFVKELLQRDPLLVFGEGEYGVTDILYAAA--RSKNSEVFRLLLDNAVAP-RCCLSSGGEFEEKLS  177 (629)
Q Consensus       107 ~A~~~g------~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~--~~g~~~iv~~Ll~~Ga~~-~~~~~~~~~~~~~~~  177 (629)
                      .|+..+      +.++|++||++|++ ++.+|..|.||||.|+.  ..++.+++++|+++||++ +..            
T Consensus        75 ~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~------------  141 (494)
T PHA02989         75 AVLRNREITSNKIKKIVKLLLKFGAD-INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVK------------  141 (494)
T ss_pred             HHHhccCcchhhHHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCccccc------------
Confidence            998754      47899999999999 68899999999998743  237899999999999999 433            


Q ss_pred             cchhHHhhhccchHHHHHHhc--CCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC----Ccce--ecccCCCCcccc
Q 048228          178 DSYSVFKWEMMNRAVHAVARG--GNLDILRQLLGDCENVLAYRDVQGSTILHSASGRG----QVEV--LIAKSPSLISVT  249 (629)
Q Consensus       178 ~~~~~~~d~~g~t~Lh~A~~~--g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g----~~~i--lL~~~gadin~~  249 (629)
                             +..|+||||+|+..  ++.++|++|+++|++++...+..|.||||+|+..+    +.++  +|++.|++++..
T Consensus       142 -------d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~  214 (494)
T PHA02989        142 -------NSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETN  214 (494)
T ss_pred             -------CCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCcccc
Confidence                   34588999999864  68999999999999998646889999999998765    5666  888999999999


Q ss_pred             CCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCc
Q 048228          250 NSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINL  329 (629)
Q Consensus       250 d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadv  329 (629)
                      |..|.|+||.++.....    ...+..+++++|+. +     +++|.+|..|+||||+|+..+ +.+++++|++ .|+|+
T Consensus       215 ~~~~~t~l~~~~~~~~~----~~~~~~~il~~l~~-~-----advn~~d~~G~TpL~~Aa~~~-~~~~v~~LL~-~Gadi  282 (494)
T PHA02989        215 NNGSESVLESFLDNNKI----LSKKEFKVLNFILK-Y-----IKINKKDKKGFNPLLISAKVD-NYEAFNYLLK-LGDDI  282 (494)
T ss_pred             CCccccHHHHHHHhchh----hcccchHHHHHHHh-C-----CCCCCCCCCCCCHHHHHHHhc-CHHHHHHHHH-cCCCc
Confidence            99999999988764210    00245788887765 5     569999999999999999999 9999999999 99999


Q ss_pred             ccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCC
Q 048228          330 NIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGI  365 (629)
Q Consensus       330 n~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gad  365 (629)
                      |.+|..|+||||+|+..++.+    +++.|++.+..
T Consensus       283 n~~d~~G~TpL~~A~~~~~~~----iv~~LL~~~p~  314 (494)
T PHA02989        283 YNVSKDGDTVLTYAIKHGNID----MLNRILQLKPG  314 (494)
T ss_pred             cccCCCCCCHHHHHHHcCCHH----HHHHHHhcCCC
Confidence            999999999999999999987    88999987754


No 25 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=6.2e-38  Score=315.62  Aligned_cols=235  Identities=15%  Similarity=0.133  Sum_probs=189.4

Q ss_pred             cCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccch
Q 048228          111 AGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNR  190 (629)
Q Consensus       111 ~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t  190 (629)
                      .++.+++++|+++++.   ..|.+|.||||+| +..|+.+++++|+++|++++...                     |+|
T Consensus         9 ~~~~~~~~~Lis~~a~---~~D~~G~TpLh~A-a~~g~~eiv~~Ll~~ga~~n~~d---------------------~~T   63 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---KADVHGHSALYYA-IADNNVRLVCTLLNAGALKNLLE---------------------NEF   63 (284)
T ss_pred             cCHHHHHHHHHhCCCC---CCCCCCCcHHHHH-HHcCCHHHHHHHHHCcCCCcCCC---------------------CCC
Confidence            4567777777777653   3677778888777 66677888888888777665321                     357


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCC-chHHHHHhcCCCC
Q 048228          191 AVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGD-TFLHMVVAGFRSP  267 (629)
Q Consensus       191 ~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~-TpLh~A~~~~~~~  267 (629)
                      |||+|+..|+.++|++|+++|++++. +|..|+||||+|+..|+.++  +|+..|++++.++..|+ ||||+|+.     
T Consensus        64 pLh~Aa~~g~~eiV~lLL~~Gadvn~-~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~-----  137 (284)
T PHA02791         64 PLHQAATLEDTKIVKILLFSGMDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVM-----  137 (284)
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHH-----
Confidence            88888888888888888888888775 77788888888888888777  66777788888887774 89999998     


Q ss_pred             CccccccHHHHHHHHHcCCCCcchhhhccCC-cCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcH-HHHHHh
Q 048228          268 GFRRVDHQIQLMEQLVSGKIVEVKDIINVTN-NNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTP-LDLLKQ  345 (629)
Q Consensus       268 ~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d-~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~Tp-Lh~A~~  345 (629)
                           .++.+++++|++++       .+..| ..|.||||+|+..| +.+++++||+ +|+++|.+|..|.|| ||+|+.
T Consensus       138 -----~g~~eivk~LL~~~-------~~~~d~~~g~TpLh~Aa~~g-~~eiv~lLL~-~gAd~n~~d~~g~t~~L~~Aa~  203 (284)
T PHA02791        138 -----LNDVSIVSYFLSEI-------PSTFDLAILLSCIHITIKNG-HVDMMILLLD-YMTSTNTNNSLLFIPDIKLAID  203 (284)
T ss_pred             -----cCCHHHHHHHHhcC-------CcccccccCccHHHHHHHcC-CHHHHHHHHH-CCCCCCcccCCCCChHHHHHHH
Confidence                 58999999999987       22233 35899999999999 9999999999 999999999999987 999999


Q ss_pred             CCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCcc
Q 048228          346 HPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENAS  411 (629)
Q Consensus       346 ~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~  411 (629)
                      .++.+    ++++|+++|+++|.+|..| |+|      +          ..|++++||++-++...
T Consensus       204 ~~~~e----~v~lLl~~Ga~in~~~~~~-~~l------~----------~~e~~~~ll~~~~~~~~  248 (284)
T PHA02791        204 NKDLE----MLQALFKYDINIYSVNLEN-VLL------D----------DAEIAKMIIEKHVEYKS  248 (284)
T ss_pred             cCCHH----HHHHHHHCCCCCccCcccC-ccC------C----------CHHHHHHHHHhhhhhcc
Confidence            99988    9999999999999999954 665      2          47999999999887653


No 26 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=5.6e-38  Score=338.01  Aligned_cols=348  Identities=13%  Similarity=0.098  Sum_probs=270.4

Q ss_pred             cHHHHHHHCCCHHH--HHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcH-HHHHHHhhcccccCCCcccc
Q 048228           21 SPIDFAAANGHYEL--VKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSS-VARKLLHDCETKKGHNSLIR   97 (629)
Q Consensus        21 TpLh~Aa~~G~~~~--v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~-~i~~lL~~~~~~~g~~~~~~   97 (629)
                      ..|.-.|..=+.+.  .+.||+.|+++..             .|++.||||.-....+. +=+++++.    -+..++..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-------------~~~~~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   67 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPLY-------------EYDGETPLKAYVTKKNNNIKNDVVIL----LLSSVDYK   67 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCccc-------------ccCCCccHHHHHhhhhhhHHHHHHHH----HHhCCCcC
Confidence            44555565555444  5689999999853             48899999998776543 22233333    34567777


Q ss_pred             cCCCChHHHH-HHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc-----
Q 048228           98 AGYGGWLLYT-AASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGE-----  171 (629)
Q Consensus        98 d~~g~tpLh~-A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~-----  171 (629)
                      +-+|..++|+ |...|++|+|++|+++|++ ++.++..|.||+++|+...++.|++++|+++||++......+-.     
T Consensus        68 n~~~~~~~~~~~s~n~~lElvk~LI~~GAd-vN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~  146 (631)
T PHA02792         68 NINDFDIFEYLCSDNIDIELLKLLISKGLE-INSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQ  146 (631)
T ss_pred             ccCCccHHHHHHHhcccHHHHHHHHHcCCC-cccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhh
Confidence            7788889975 5678999999999999998 57788889999999966679999999999999997643332211     


Q ss_pred             --------hhhhhc----cchhHHhhhccchHHHHHHhcC-------CHHHHHHHHhCCCCcccccCCCCCcHHHHHHhc
Q 048228          172 --------FEEKLS----DSYSVFKWEMMNRAVHAVARGG-------NLDILRQLLGDCENVLAYRDVQGSTILHSASGR  232 (629)
Q Consensus       172 --------~~~~~~----~~~~~~~d~~g~t~Lh~A~~~g-------~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~  232 (629)
                              +.....    +-..+.+|+.|.||||+|+..+       +.+++++||++|++++. .|..|.||||+|+.+
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~-~d~~g~t~l~~~~~~  225 (631)
T PHA02792        147 ITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRY-YTYREHTTLYYYVDK  225 (631)
T ss_pred             cccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCc-cCCCCChHHHHHHHc
Confidence                    111111    1123477888999999999999       89999999999999996 999999999999999


Q ss_pred             CCc--ce-------------------------------------------------------------------------
Q 048228          233 GQV--EV-------------------------------------------------------------------------  237 (629)
Q Consensus       233 g~~--~i-------------------------------------------------------------------------  237 (629)
                      .++  |+                                                                         
T Consensus       226 ~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  305 (631)
T PHA02792        226 CDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDS  305 (631)
T ss_pred             ccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHH
Confidence            833  33                                                                         


Q ss_pred             --------------------ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccC
Q 048228          238 --------------------LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVT  297 (629)
Q Consensus       238 --------------------lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~  297 (629)
                                          ++++.|++++.  ......++.|+.          .++.+++++|+++|     |++|.+
T Consensus       306 ~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r--~~~~n~~~~Aa~----------~gn~eIVelLIs~G-----ADIN~k  368 (631)
T PHA02792        306 IQDLLSEYVSYHTVYINVIKCMIDEGATLYR--FKHINKYFQKFD----------NRDPKVVEYILKNG-----NVVVED  368 (631)
T ss_pred             HHHHHHHHHhcCCccHHHHHHHHHCCCcccc--CCcchHHHHHHH----------cCCHHHHHHHHHcC-----Cchhhh
Confidence                                66677777641  224567888887          59999999999999     779999


Q ss_pred             CcCC--chHHHHHHHcCCcH---HHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCC
Q 048228          298 NNNG--RTALHLAVSENIQC---NLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNV  372 (629)
Q Consensus       298 d~~g--~TpLh~A~~~~~~~---~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~  372 (629)
                      |..|  .||||+|+... ..   +++++|++ +|+|+|.+|..|.||||+|+..++.+    ++++|+++|+++|.+|..
T Consensus       369 D~~g~~~TpLh~A~~n~-~~~v~~IlklLIs-~GADIN~kD~~G~TPLh~Aa~~~n~e----ivelLLs~GADIN~kD~~  442 (631)
T PHA02792        369 DDNIINIMPLFPTLSIH-ESDVLSILKLCKP-YIDDINKIDKHGRSILYYCIESHSVS----LVEWLIDNGADINITTKY  442 (631)
T ss_pred             cCCCCChhHHHHHHHhc-cHhHHHHHHHHHh-cCCccccccccCcchHHHHHHcCCHH----HHHHHHHCCCCCCCcCCC
Confidence            9875  59999987765 44   46899999 99999999999999999999999987    999999999999999999


Q ss_pred             CccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCc
Q 048228          373 ARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENA  410 (629)
Q Consensus       373 G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~  410 (629)
                      |+|||++|+.....+.........+++++||++|.++.
T Consensus       443 G~TpL~~A~~~~~~~~~~i~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        443 GSTCIGICVILAHACIPEIAELYIKILEIILSKLPTIE  480 (631)
T ss_pred             CCCHHHHHHHHHhcccHHHHHHHHHHHHHHHhcCCChh
Confidence            99999999862211100001113578999999998876


No 27 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=7.5e-38  Score=313.04  Aligned_cols=189  Identities=21%  Similarity=0.186  Sum_probs=167.3

Q ss_pred             CCCcHHHHHHHCCCHHHHHHHHH-hCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccc
Q 048228           18 WYASPIDFAAANGHYELVKELLH-LDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLI   96 (629)
Q Consensus        18 ~g~TpLh~Aa~~G~~~~v~~LL~-~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~   96 (629)
                      .|.|||-+||++||.++|++||+ .++++...-+-  +++  ...++|.+||.+|+..|+.+|+++|++    +|+++|.
T Consensus        41 ~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV--~FD--ge~IegappLWaAsaAGHl~vVk~L~~----~ga~VN~  112 (615)
T KOG0508|consen   41 NGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSV--RFD--GETIEGAPPLWAASAAGHLEVVKLLLR----RGASVND  112 (615)
T ss_pred             CCCCceeeehhcCcHHHHHHHHHHhcCCccCCceE--EeC--CcccCCCchhhHHhccCcHHHHHHHHH----hcCcccc
Confidence            47799999999999999999999 47766432100  000  124678889999999999999999999    9999999


Q ss_pred             ccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhh
Q 048228           97 RAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKL  176 (629)
Q Consensus        97 ~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~  176 (629)
                      ......|||-.||..|++++||+|+++|++ ++..|..|.|.||+| +..|+.+|+++|++.|||+|..+          
T Consensus       113 tT~TNStPLraACfDG~leivKyLvE~gad-~~IanrhGhTcLmIa-~ykGh~~I~qyLle~gADvn~ks----------  180 (615)
T KOG0508|consen  113 TTRTNSTPLRAACFDGHLEIVKYLVEHGAD-PEIANRHGHTCLMIA-CYKGHVDIAQYLLEQGADVNAKS----------  180 (615)
T ss_pred             ccccCCccHHHHHhcchhHHHHHHHHcCCC-CcccccCCCeeEEee-eccCchHHHHHHHHhCCCcchhc----------
Confidence            999999999999999999999999999999 589999999999999 66799999999999999999664          


Q ss_pred             ccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce
Q 048228          177 SDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV  237 (629)
Q Consensus       177 ~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i  237 (629)
                               ..|+|+||.|++.|+++++++|+.+|+.+.  .|..|.|||..|+..|+.++
T Consensus       181 ---------~kGNTALH~caEsG~vdivq~Ll~~ga~i~--~d~~GmtPL~~Aa~tG~~~i  230 (615)
T KOG0508|consen  181 ---------YKGNTALHDCAESGSVDIVQLLLKHGAKID--VDGHGMTPLLLAAVTGHTDI  230 (615)
T ss_pred             ---------ccCchHHHhhhhcccHHHHHHHHhCCceee--ecCCCCchHHHHhhhcchHH
Confidence                     458999999999999999999999999986  78889999999999999877


No 28 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-36  Score=328.43  Aligned_cols=241  Identities=18%  Similarity=0.217  Sum_probs=190.8

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccch
Q 048228          101 GGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSY  180 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~  180 (629)
                      .+++||.|+..|+.++|++|+++|++ ++..+..|.||||+| +..|+.+++++|+++|++++...              
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~-~n~~~~~g~tpL~~A-~~~~~~~~v~~Ll~~ga~~~~~~--------------   65 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGIN-PNFEIYDGISPIKLA-MKFRDSEAIKLLMKHGAIPDVKY--------------   65 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCC-CCccCCCCCCHHHHH-HHcCCHHHHHHHHhCCCCccccC--------------
Confidence            45677888888888888888877776 456667778887777 66677888888888777665432              


Q ss_pred             hHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHH
Q 048228          181 SVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLH  258 (629)
Q Consensus       181 ~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh  258 (629)
                           ..+.||||.|+..|+.++|++|++.|++++...+..|.||||+|+..|+.++  +|++.|++++.++..|.||||
T Consensus        66 -----~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh  140 (413)
T PHA02875         66 -----PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLH  140 (413)
T ss_pred             -----CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence                 2356788888888888888888887776655566677888888888887777  667777888888888888888


Q ss_pred             HHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCC-
Q 048228          259 MVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGM-  337 (629)
Q Consensus       259 ~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~-  337 (629)
                      +|+.          .++.+++++|+++|     ++++.+|..|.||||+|+..| +.+++++|++ .|+++|..+..|. 
T Consensus       141 ~A~~----------~~~~~~v~~Ll~~g-----~~~~~~d~~g~TpL~~A~~~g-~~eiv~~Ll~-~ga~~n~~~~~~~~  203 (413)
T PHA02875        141 LAVM----------MGDIKGIELLIDHK-----ACLDIEDCCGCTPLIIAMAKG-DIAICKMLLD-SGANIDYFGKNGCV  203 (413)
T ss_pred             HHHH----------cCCHHHHHHHHhcC-----CCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHh-CCCCCCcCCCCCCc
Confidence            8888          48889999999888     668888999999999999988 8999999999 8999998888774 


Q ss_pred             cHHHHHHhCCCCchHHHHHHHHHHcCCCCCCC---CCCCccHHHHHHHh
Q 048228          338 TPLDLLKQHPRSASSEILIKQLISAGGISNCQ---DNVARNAIACHLKG  383 (629)
Q Consensus       338 TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~---d~~G~TpL~~A~~~  383 (629)
                      ||||+|+..++.+    ++++|+++|+|+|..   +..+.|||+.+...
T Consensus       204 t~l~~A~~~~~~~----iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        204 AALCYAIENNKID----IVRLFIKRGADCNIMFMIEGEECTILDMICNM  248 (413)
T ss_pred             hHHHHHHHcCCHH----HHHHHHHCCcCcchHhhcCCCchHHHHHHHhh
Confidence            7888899998887    888999999998865   56788888877643


No 29 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.2e-36  Score=332.28  Aligned_cols=289  Identities=15%  Similarity=0.110  Sum_probs=240.9

Q ss_pred             CHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhc--CcHHHHHHHhhcccccCCCcccccCCCChHHHHH
Q 048228           31 HYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKC--RSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTA  108 (629)
Q Consensus        31 ~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~--~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A  108 (629)
                      ..++|+.||+.+. ++..             ..+.|+++.+...  +..+++++|++    +|++++.+|..|.||||.|
T Consensus        17 ~~~~v~~ll~~~~-~~~~-------------~~~~~~~~~yl~~~~~~~~iv~~Ll~----~Gadvn~~d~~g~TpL~~~   78 (489)
T PHA02798         17 KLSTVKLLIKSCN-PNEI-------------VNEYSIFQKYLQRDSPSTDIVKLFIN----LGANVNGLDNEYSTPLCTI   78 (489)
T ss_pred             cHHHHHHHHhcCC-hhhh-------------cccchHHHHHHhCCCCCHHHHHHHHH----CCCCCCCCCCCCCChHHHH
Confidence            5789999998754 3321             3466777744443  58999999999    9999999999999999999


Q ss_pred             HHc-----CCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc---CCHHHHHHHHHcCCCCccccCCCCchhhhhccch
Q 048228          109 ASA-----GDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS---KNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSY  180 (629)
Q Consensus       109 ~~~-----g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~---g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~  180 (629)
                      +..     ++.+++++|+++|++ ++..|..|.||||+| +..   ++.+++++|+++|++++..               
T Consensus        79 ~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a-~~~~~~~~~~iv~~Ll~~Gadvn~~---------------  141 (489)
T PHA02798         79 LSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCL-LSNGYINNLEILLFMIENGADTTLL---------------  141 (489)
T ss_pred             HHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHH-HHcCCcChHHHHHHHHHcCCCcccc---------------
Confidence            864     779999999999998 688999999999998 544   4789999999999999865               


Q ss_pred             hHHhhhccchHHHHHHhcCC---HHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC----Ccce--ecccCCCCccccCC
Q 048228          181 SVFKWEMMNRAVHAVARGGN---LDILRQLLGDCENVLAYRDVQGSTILHSASGRG----QVEV--LIAKSPSLISVTNS  251 (629)
Q Consensus       181 ~~~~d~~g~t~Lh~A~~~g~---~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g----~~~i--lL~~~gadin~~d~  251 (629)
                          |..|.||||+|+..++   .+++++|+++|++++...+..|.||||.++..+    +.++  +|.+.|++++..+.
T Consensus       142 ----d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~  217 (489)
T PHA02798        142 ----DKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK  217 (489)
T ss_pred             ----CCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence                3558899999999998   999999999999998644578999999998754    4555  88899999999999


Q ss_pred             CCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCccc
Q 048228          252 HGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNI  331 (629)
Q Consensus       252 ~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~  331 (629)
                      .|.|+++.......   .....++.+++++|+. +     +++|.+|..|+||||+|+..+ +.+++++||+ .|+|+|.
T Consensus       218 ~~~~~~~~~l~~l~---~~~~~~~~~i~~~l~~-~-----~dvN~~d~~G~TPL~~A~~~~-~~~~v~~LL~-~GAdin~  286 (489)
T PHA02798        218 SHKKKFMEYLNSLL---YDNKRFKKNILDFIFS-Y-----IDINQVDELGFNPLYYSVSHN-NRKIFEYLLQ-LGGDINI  286 (489)
T ss_pred             cccchHHHHHHHHH---hhcccchHHHHHHHHh-c-----CCCCCcCcCCccHHHHHHHcC-cHHHHHHHHH-cCCcccc
Confidence            99999872111000   0000367888988776 4     459999999999999999999 9999999999 9999999


Q ss_pred             CCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCC
Q 048228          332 QDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVA  373 (629)
Q Consensus       332 ~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G  373 (629)
                      +|..|+||||+|+..++.+    +++.|+++|++++......
T Consensus       287 ~d~~G~TpL~~A~~~~~~~----iv~~lL~~~~~~~~i~~~~  324 (489)
T PHA02798        287 ITELGNTCLFTAFENESKF----IFNSILNKKPNKNTISYTY  324 (489)
T ss_pred             cCCCCCcHHHHHHHcCcHH----HHHHHHccCCCHHHHHHHH
Confidence            9999999999999999977    9999999999998665443


No 30 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.1e-36  Score=332.52  Aligned_cols=283  Identities=16%  Similarity=0.140  Sum_probs=238.0

Q ss_pred             cHHHHHHHhhcccccCCCcccccCCCChHHHHHH--HcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHH----HcCCH
Q 048228           76 SSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAA--SAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAA----RSKNS  149 (629)
Q Consensus        76 ~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~--~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~----~~g~~  149 (629)
                      ..+++++|++    .+ +++.. ..|.|+++.+.  ..++.++|++|+++|++ ++..|..|.||||+|+.    ..++.
T Consensus        17 ~~~~v~~ll~----~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gad-vn~~d~~g~TpL~~~~~n~~~~~~~~   89 (489)
T PHA02798         17 KLSTVKLLIK----SC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGAN-VNGLDNEYSTPLCTILSNIKDYKHML   89 (489)
T ss_pred             cHHHHHHHHh----cC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCC-CCCCCCCCCChHHHHHHhHHhHHhHH
Confidence            3467777776    43 44433 34667766444  45589999999999998 68899999999999843    13678


Q ss_pred             HHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcC---CHHHHHHHHhCCCCcccccCCCCCcHH
Q 048228          150 EVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGG---NLDILRQLLGDCENVLAYRDVQGSTIL  226 (629)
Q Consensus       150 ~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g---~~~iv~~Ll~~gad~~~~~d~~g~TpL  226 (629)
                      +++++|+++|++++..+                   ..|+||||+|+..+   +.+++++|+++|++++. .|..|.|||
T Consensus        90 ~iv~~Ll~~GadiN~~d-------------------~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~-~d~~g~tpL  149 (489)
T PHA02798         90 DIVKILIENGADINKKN-------------------SDGETPLYCLLSNGYINNLEILLFMIENGADTTL-LDKDGFTML  149 (489)
T ss_pred             HHHHHHHHCCCCCCCCC-------------------CCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccc-cCCCCCcHH
Confidence            99999999999998664                   45889999999986   78999999999999996 999999999


Q ss_pred             HHHHhcCC---cce--ecccCCCCccccC-CCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcC
Q 048228          227 HSASGRGQ---VEV--LIAKSPSLISVTN-SHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNN  300 (629)
Q Consensus       227 h~A~~~g~---~~i--lL~~~gadin~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~  300 (629)
                      |+|+..++   .++  +|++.|++++..+ ..|.||||.++.....      .++.+++++|+++|     ++++..+..
T Consensus       150 ~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~------~~~~~ivk~Li~~G-----a~i~~~~~~  218 (489)
T PHA02798        150 QVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNID------RIDADILKLFVDNG-----FIINKENKS  218 (489)
T ss_pred             HHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccc------cCCHHHHHHHHHCC-----CCcccCCcc
Confidence            99999987   666  8888899999985 5799999999873111      35899999999999     679999999


Q ss_pred             CchHHH-------HHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCC
Q 048228          301 GRTALH-------LAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVA  373 (629)
Q Consensus       301 g~TpLh-------~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G  373 (629)
                      |.|+++       ++...+ +.+++++|+.  |+|+|.+|..|+||||+|+..++.+    ++++|+++|||+|.+|..|
T Consensus       219 ~~~~~~~~l~~l~~~~~~~-~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~----~v~~LL~~GAdin~~d~~G  291 (489)
T PHA02798        219 HKKKFMEYLNSLLYDNKRF-KKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRK----IFEYLLQLGGDINIITELG  291 (489)
T ss_pred             ccchHHHHHHHHHhhcccc-hHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHH----HHHHHHHcCCcccccCCCC
Confidence            999877       233445 7889999876  6999999999999999999999987    9999999999999999999


Q ss_pred             ccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCcccc
Q 048228          374 RNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDA  413 (629)
Q Consensus       374 ~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d  413 (629)
                      +|||++|+..+          +.++++.|+++|++++...
T Consensus       292 ~TpL~~A~~~~----------~~~iv~~lL~~~~~~~~i~  321 (489)
T PHA02798        292 NTCLFTAFENE----------SKFIFNSILNKKPNKNTIS  321 (489)
T ss_pred             CcHHHHHHHcC----------cHHHHHHHHccCCCHHHHH
Confidence            99999999877          5899999999999998543


No 31 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.8e-36  Score=299.68  Aligned_cols=235  Identities=15%  Similarity=0.090  Sum_probs=146.7

Q ss_pred             CCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHH
Q 048228           30 GHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAA  109 (629)
Q Consensus        30 G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~  109 (629)
                      ++.+++++|+++|++.              .+.+|.||||+|+..++.+++++|++    +|++++..+  |.||||+|+
T Consensus        10 ~~~~~~~~Lis~~a~~--------------~D~~G~TpLh~Aa~~g~~eiv~~Ll~----~ga~~n~~d--~~TpLh~Aa   69 (284)
T PHA02791         10 KSKQLKSFLSSKDAFK--------------ADVHGHSALYYAIADNNVRLVCTLLN----AGALKNLLE--NEFPLHQAA   69 (284)
T ss_pred             CHHHHHHHHHhCCCCC--------------CCCCCCcHHHHHHHcCCHHHHHHHHH----CcCCCcCCC--CCCHHHHHH
Confidence            4555566666655542              12345555555555555555555555    455444432  345555555


Q ss_pred             HcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhcc-
Q 048228          110 SAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMM-  188 (629)
Q Consensus       110 ~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g-  188 (629)
                      ..|+.++|++|+++|++ ++.+|..|.||||+| +..|+.+++++|+++|++++...                   ..| 
T Consensus        70 ~~g~~eiV~lLL~~Gad-vn~~d~~G~TpLh~A-a~~g~~eivk~Ll~~gadin~~~-------------------~~g~  128 (284)
T PHA02791         70 TLEDTKIVKILLFSGMD-DSQFDDKGNTALYYA-VDSGNMQTVKLFVKKNWRLMFYG-------------------KTGW  128 (284)
T ss_pred             HCCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HHcCCHHHHHHHHHCCCCcCccC-------------------CCCC
Confidence            55555555555555544 344555555555555 44455555555555555544321                   112 


Q ss_pred             chHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccCCCCccccC-CCCCchHHHHHhcCCCC
Q 048228          189 NRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKSPSLISVTN-SHGDTFLHMVVAGFRSP  267 (629)
Q Consensus       189 ~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~gadin~~d-~~g~TpLh~A~~~~~~~  267 (629)
                      .||||+|+..|+.++|++|++++++.                                  .| ..|.||||+|+.     
T Consensus       129 ~TpL~~Aa~~g~~eivk~LL~~~~~~----------------------------------~d~~~g~TpLh~Aa~-----  169 (284)
T PHA02791        129 KTSFYHAVMLNDVSIVSYFLSEIPST----------------------------------FDLAILLSCIHITIK-----  169 (284)
T ss_pred             cHHHHHHHHcCCHHHHHHHHhcCCcc----------------------------------cccccCccHHHHHHH-----
Confidence            25555555555555555555543221                                  11 247888888888     


Q ss_pred             CccccccHHHHHHHHHcCCCCcchhhhccCCcCCchH-HHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhC
Q 048228          268 GFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTA-LHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQH  346 (629)
Q Consensus       268 ~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~Tp-Lh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~  346 (629)
                           .|+.+++++|+++|     |++|.+|..|.|| ||+|+..+ +.++|++||+ +|+|+|.+|.. .|+|      
T Consensus       170 -----~g~~eiv~lLL~~g-----Ad~n~~d~~g~t~~L~~Aa~~~-~~e~v~lLl~-~Ga~in~~~~~-~~~l------  230 (284)
T PHA02791        170 -----NGHVDMMILLLDYM-----TSTNTNNSLLFIPDIKLAIDNK-DLEMLQALFK-YDINIYSVNLE-NVLL------  230 (284)
T ss_pred             -----cCCHHHHHHHHHCC-----CCCCcccCCCCChHHHHHHHcC-CHHHHHHHHH-CCCCCccCccc-CccC------
Confidence                 58899999999988     6688888888876 99999998 9999999998 89999999884 4777      


Q ss_pred             CCCchHHHHHHHHHHcCCCCC
Q 048228          347 PRSASSEILIKQLISAGGISN  367 (629)
Q Consensus       347 ~~~~~~~~lv~~Ll~~Gadvn  367 (629)
                      ++.|    ++++||++-++..
T Consensus       231 ~~~e----~~~~ll~~~~~~~  247 (284)
T PHA02791        231 DDAE----IAKMIIEKHVEYK  247 (284)
T ss_pred             CCHH----HHHHHHHhhhhhc
Confidence            4545    8888888887764


No 32 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.5e-35  Score=319.59  Aligned_cols=242  Identities=23%  Similarity=0.246  Sum_probs=179.2

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccccc
Q 048228           19 YASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRA   98 (629)
Q Consensus        19 g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d   98 (629)
                      .+++||.|+..|+.++|++|+++|++++.+.            .+|.||||+|+..++.+++++|++    +|++++..+
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~------------~~g~tpL~~A~~~~~~~~v~~Ll~----~ga~~~~~~   65 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEI------------YDGISPIKLAMKFRDSEAIKLLMK----HGAIPDVKY   65 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccC------------CCCCCHHHHHHHcCCHHHHHHHHh----CCCCccccC
Confidence            4689999999999999999999999887642            468888888888888888888888    788888777


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      ..+.||||.|+..|+.++|++|++.|+...+..+..|.||||+| +..|+.+++++|+++|++++...            
T Consensus        66 ~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A-~~~~~~~iv~~Ll~~gad~~~~~------------  132 (413)
T PHA02875         66 PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLA-TILKKLDIMKLLIARGADPDIPN------------  132 (413)
T ss_pred             CCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHH-HHhCCHHHHHHHHhCCCCCCCCC------------
Confidence            77888888888888888888888888766556667788888887 56688888888888888776543            


Q ss_pred             chhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccCCCCccccCCCCCchHH
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKSPSLISVTNSHGDTFLH  258 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpLh  258 (629)
                             ..|.||||+|+..|+.+++++|+++|++++                                .+|..|.||||
T Consensus       133 -------~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~--------------------------------~~d~~g~TpL~  173 (413)
T PHA02875        133 -------TDKFSPLHLAVMMGDIKGIELLIDHKACLD--------------------------------IEDCCGCTPLI  173 (413)
T ss_pred             -------CCCCCHHHHHHHcCCHHHHHHHHhcCCCCC--------------------------------CCCCCCCCHHH
Confidence                   336688888888888888888887776665                                33445555556


Q ss_pred             HHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCc-hHHHHHHHcCCcHHHHHHHhcCCCCCcccC---CC
Q 048228          259 MVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGR-TALHLAVSENIQCNLVELLMTVPSINLNIQ---DG  334 (629)
Q Consensus       259 ~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~-TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~---d~  334 (629)
                      +|+.          .++.+++++|++.|     ++++..+..|. ||||+|+..+ +.+++++|++ +|+|+|..   +.
T Consensus       174 ~A~~----------~g~~eiv~~Ll~~g-----a~~n~~~~~~~~t~l~~A~~~~-~~~iv~~Ll~-~gad~n~~~~~~~  236 (413)
T PHA02875        174 IAMA----------KGDIAICKMLLDSG-----ANIDYFGKNGCVAALCYAIENN-KIDIVRLFIK-RGADCNIMFMIEG  236 (413)
T ss_pred             HHHH----------cCCHHHHHHHHhCC-----CCCCcCCCCCCchHHHHHHHcC-CHHHHHHHHH-CCcCcchHhhcCC
Confidence            6665          36667777777776     55666666653 6666677766 7777777777 67776654   45


Q ss_pred             CCCcHHHHHHh
Q 048228          335 EGMTPLDLLKQ  345 (629)
Q Consensus       335 ~G~TpLh~A~~  345 (629)
                      .+.|||++++.
T Consensus       237 ~~~t~l~~~~~  247 (413)
T PHA02875        237 EECTILDMICN  247 (413)
T ss_pred             CchHHHHHHHh
Confidence            56677766653


No 33 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=3.7e-36  Score=265.81  Aligned_cols=205  Identities=22%  Similarity=0.279  Sum_probs=183.5

Q ss_pred             cchHHHHHHhcCCHHHHHHHHhCCC-CcccccCCCCCcHHHHHHhcCCcce---ecccCCCCccccCCCCCchHHHHHhc
Q 048228          188 MNRAVHAVARGGNLDILRQLLGDCE-NVLAYRDVQGSTILHSASGRGQVEV---LIAKSPSLISVTNSHGDTFLHMVVAG  263 (629)
Q Consensus       188 g~t~Lh~A~~~g~~~iv~~Ll~~ga-d~~~~~d~~g~TpLh~A~~~g~~~i---lL~~~gadin~~d~~g~TpLh~A~~~  263 (629)
                      +.++.+.+|+.....-|+.|++... .++...|.+|+|||||||..|+.++   ||.+.+..+|.+|..|+||||+|+. 
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s-   81 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAAS-   81 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhh-
Confidence            3478888888888888999988877 5665455599999999999999999   5658889999999999999999999 


Q ss_pred             CCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHH
Q 048228          264 FRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLL  343 (629)
Q Consensus       264 ~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A  343 (629)
                               .|+.|+|+.|+.+.+    +|+|.++..|+|+||||+..+ ..+|+++|++ +|+.++++|..|+||||.|
T Consensus        82 ---------~g~~evVk~Ll~r~~----advna~tn~G~T~LHyAagK~-r~eIaqlLle-~ga~i~~kD~~~qtplHRA  146 (226)
T KOG4412|consen   82 ---------NGNDEVVKELLNRSG----ADVNATTNGGQTCLHYAAGKG-RLEIAQLLLE-KGALIRIKDKQGQTPLHRA  146 (226)
T ss_pred             ---------cCcHHHHHHHhcCCC----CCcceecCCCcceehhhhcCC-hhhHHHHHHh-cCCCCcccccccCchhHHH
Confidence                     599999999999832    569999999999999999999 9999999999 9999999999999999999


Q ss_pred             HhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccCCChhhhh
Q 048228          344 KQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASVEYS  423 (629)
Q Consensus       344 ~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a  423 (629)
                      +..|..+    ++++|+..|+.+|.+|..|+||||.|+..+          +.+.+.+|+++|||++..|+.| |++..+
T Consensus       147 AavGklk----vie~Li~~~a~~n~qDk~G~TpL~~al~e~----------~~d~a~lLV~~gAd~~~edke~-t~~~~a  211 (226)
T KOG4412|consen  147 AAVGKLK----VIEYLISQGAPLNTQDKYGFTPLHHALAEG----------HPDVAVLLVRAGADTDREDKEG-TALRIA  211 (226)
T ss_pred             Hhccchh----hHHHHHhcCCCCCcccccCccHHHHHHhcc----------CchHHHHHHHhccceeeccccC-chHHHH
Confidence            9999988    999999999999999999999999997655          5799999999999999999877 876644


No 34 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=1.1e-35  Score=262.95  Aligned_cols=205  Identities=28%  Similarity=0.368  Sum_probs=122.3

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhcCCCccccC-CCCCCCHHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCchhhhhcc
Q 048228          101 GGWLLYTAASAGDVRFVKELLQRDPLLVFGE-GEYGVTDILYAAARSKNSEVFRLLLD-NAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~-d~~g~tpL~~AA~~~g~~~iv~~Ll~-~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      +.++.+.+|......-|+.|++..+...+.+ |.+|+|||||| +..|+.+|+.+|+. .+..+|               
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa-~S~g~~eiv~fLlsq~nv~~d---------------   66 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWA-CSFGHVEIVYFLLSQPNVKPD---------------   66 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeee-eecCchhHHHHHHhcCCCCCC---------------
Confidence            4566777777777777777777766333333 33777777777 55677777777774 222222               


Q ss_pred             chhHHhhhccchHHHHHHhcCCHHHHHHHHhC-CCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCc
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNLDILRQLLGD-CENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDT  255 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~-gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~T  255 (629)
                          .+|+.|+||||+||..|+.++|+.|+.+ |+|+|. .+..|+|+||||+..|..+|  +|+++|+.++++|..|.|
T Consensus        67 ----dkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna-~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qt  141 (226)
T KOG4412|consen   67 ----DKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNA-TTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQT  141 (226)
T ss_pred             ----CccccCCchhhhhhhcCcHHHHHHHhcCCCCCcce-ecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCc
Confidence                2355577777777777777777777776 666664 55556666665555555555  555555555555555555


Q ss_pred             hHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCC
Q 048228          256 FLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGE  335 (629)
Q Consensus       256 pLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~  335 (629)
                      |||.|+.          .|.++++++|+..|     +.+|.+|..|+||||.|...+ +.++..+|++ +|||++..|+.
T Consensus       142 plHRAAa----------vGklkvie~Li~~~-----a~~n~qDk~G~TpL~~al~e~-~~d~a~lLV~-~gAd~~~edke  204 (226)
T KOG4412|consen  142 PLHRAAA----------VGKLKVIEYLISQG-----APLNTQDKYGFTPLHHALAEG-HPDVAVLLVR-AGADTDREDKE  204 (226)
T ss_pred             hhHHHHh----------ccchhhHHHHHhcC-----CCCCcccccCccHHHHHHhcc-CchHHHHHHH-hccceeecccc
Confidence            5555555          35555555555555     445555555555555554444 5555555555 55555555555


Q ss_pred             CCcHHHHHH
Q 048228          336 GMTPLDLLK  344 (629)
Q Consensus       336 G~TpLh~A~  344 (629)
                      | |||-.|+
T Consensus       205 ~-t~~~~a~  212 (226)
T KOG4412|consen  205 G-TALRIAC  212 (226)
T ss_pred             C-chHHHHH
Confidence            5 5554443


No 35 
>PHA02792 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.2e-34  Score=305.90  Aligned_cols=315  Identities=13%  Similarity=0.084  Sum_probs=242.1

Q ss_pred             cHHHHHHhcC--cHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCH-HHHHHHHhcCCCccccCCCCCCCHHHHH
Q 048228           66 EQFDDVAKCR--SSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDV-RFVKELLQRDPLLVFGEGEYGVTDILYA  142 (629)
Q Consensus        66 t~Lh~A~~~~--~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~-~~v~~LL~~g~~~~~~~d~~g~tpL~~A  142 (629)
                      ..|...|+.-  ...-.++|++    .|+++.. ...|.||||.=....+. .-++.++.-+.. .+..+.+|.+++|+.
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~----~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~n~~~~~~~~~~   78 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIE----SGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSS-VDYKNINDFDIFEYL   78 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHH----cCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhC-CCcCccCCccHHHHH
Confidence            3444455543  3344678888    8999988 56788999987665553 233344443333 356788889999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHh-cCCHHHHHHHHhCCCCccc-----
Q 048228          143 AARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVAR-GGNLDILRQLLGDCENVLA-----  216 (629)
Q Consensus       143 A~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~-~g~~~iv~~Ll~~gad~~~-----  216 (629)
                      |...|+.|+|++|+++||+++...                   +.|.+|+|+|+. .++.|+|++||++|+|+.+     
T Consensus        79 ~s~n~~lElvk~LI~~GAdvN~~~-------------------n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g  139 (631)
T PHA02792         79 CSDNIDIELLKLLISKGLEINSIK-------------------NGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYG  139 (631)
T ss_pred             HHhcccHHHHHHHHHcCCCccccc-------------------CCCCcceeEeecCCCChHHHHHHHHCCCCcccccccC
Confidence            999999999999999999999653                   336799999966 6999999999999987421     


Q ss_pred             ------------------------------ccCCCCCcHHHHHHhcC-------Ccce--ecccCCCCccccCCCCCchH
Q 048228          217 ------------------------------YRDVQGSTILHSASGRG-------QVEV--LIAKSPSLISVTNSHGDTFL  257 (629)
Q Consensus       217 ------------------------------~~d~~g~TpLh~A~~~g-------~~~i--lL~~~gadin~~d~~g~TpL  257 (629)
                                                    ..|..|.||||+|+..+       +.++  +|+.+|++++..|..|.|||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l  219 (631)
T PHA02792        140 YKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTL  219 (631)
T ss_pred             cchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHH
Confidence                                          24567999999999999       6677  89999999999999999999


Q ss_pred             HHHHhcCC--CCC-------------------------cc----cc----------------------------------
Q 048228          258 HMVVAGFR--SPG-------------------------FR----RV----------------------------------  272 (629)
Q Consensus       258 h~A~~~~~--~~~-------------------------~~----~~----------------------------------  272 (629)
                      |+|+.+..  .+-                         ++    .+                                  
T Consensus       220 ~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~  299 (631)
T PHA02792        220 YYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSIL  299 (631)
T ss_pred             HHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHH
Confidence            99998751  100                         00    00                                  


Q ss_pred             ------------------ccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC
Q 048228          273 ------------------DHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG  334 (629)
Q Consensus       273 ------------------~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~  334 (629)
                                        .-+.+++++|+++|     ++++  ......++|.|+..+ +.++|++|++ +|||+|.+|.
T Consensus       300 ~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~G-----a~~~--r~~~~n~~~~Aa~~g-n~eIVelLIs-~GADIN~kD~  370 (631)
T PHA02792        300 KRYTDSIQDLLSEYVSYHTVYINVIKCMIDEG-----ATLY--RFKHINKYFQKFDNR-DPKVVEYILK-NGNVVVEDDD  370 (631)
T ss_pred             HHHhHHHHHHHHHHHhcCCccHHHHHHHHHCC-----Cccc--cCCcchHHHHHHHcC-CHHHHHHHHH-cCCchhhhcC
Confidence                              23566677777777     3332  233566788888888 8999999999 8999999887


Q ss_pred             CC--CcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccc
Q 048228          335 EG--MTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASD  412 (629)
Q Consensus       335 ~G--~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~  412 (629)
                      +|  .||||+|+.....+ +..++++|+++|||+|.+|..|+||||+|+..+          +.+++++|+++||+++.+
T Consensus       371 ~g~~~TpLh~A~~n~~~~-v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~----------n~eivelLLs~GADIN~k  439 (631)
T PHA02792        371 NIINIMPLFPTLSIHESD-VLSILKLCKPYIDDINKIDKHGRSILYYCIESH----------SVSLVEWLIDNGADINIT  439 (631)
T ss_pred             CCCChhHHHHHHHhccHh-HHHHHHHHHhcCCccccccccCcchHHHHHHcC----------CHHHHHHHHHCCCCCCCc
Confidence            75  58899877665543 445788889999999999999999999999776          588999999999999999


Q ss_pred             cccCCChhhhhhh
Q 048228          413 AICDAASVEYSSC  425 (629)
Q Consensus       413 d~~g~t~~~~a~~  425 (629)
                      |..|+|++++|..
T Consensus       440 D~~G~TpL~~A~~  452 (631)
T PHA02792        440 TKYGSTCIGICVI  452 (631)
T ss_pred             CCCCCCHHHHHHH
Confidence            9999999998754


No 36 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=3.1e-34  Score=287.16  Aligned_cols=221  Identities=24%  Similarity=0.286  Sum_probs=183.9

Q ss_pred             HHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhh-ccccc--C--CCcccccC
Q 048228           25 FAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHD-CETKK--G--HNSLIRAG   99 (629)
Q Consensus        25 ~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~-~~~~~--g--~~~~~~d~   99 (629)
                      -|++.|.+..+..|+-...+..+.       ..+....+|.|||.+||++|+..++++|++ |..+.  +  +..+-..-
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~-------~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~I   82 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEII-------SLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETI   82 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHH-------HHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCccc
Confidence            688889998888888765543221       223345678999999999999999999998 32221  1  22222334


Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccc
Q 048228          100 YGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDS  179 (629)
Q Consensus       100 ~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~  179 (629)
                      .|-+||..|+..||+++||.|+++|++ +|.......|||.-| |..|+.++|++|+++|+|++..+             
T Consensus        83 egappLWaAsaAGHl~vVk~L~~~ga~-VN~tT~TNStPLraA-CfDG~leivKyLvE~gad~~Ian-------------  147 (615)
T KOG0508|consen   83 EGAPPLWAASAAGHLEVVKLLLRRGAS-VNDTTRTNSTPLRAA-CFDGHLEIVKYLVEHGADPEIAN-------------  147 (615)
T ss_pred             CCCchhhHHhccCcHHHHHHHHHhcCc-cccccccCCccHHHH-HhcchhHHHHHHHHcCCCCcccc-------------
Confidence            688999999999999999999999987 566677788998777 77899999999999999998654             


Q ss_pred             hhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchH
Q 048228          180 YSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFL  257 (629)
Q Consensus       180 ~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpL  257 (629)
                            ..|.|.||+||..|+.+|+++|++.|+|+|. ++..|.|+||.|++.|++++  +|+.+|+.++. |..|.|||
T Consensus       148 ------rhGhTcLmIa~ykGh~~I~qyLle~gADvn~-ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL  219 (615)
T KOG0508|consen  148 ------RHGHTCLMIACYKGHVDIAQYLLEQGADVNA-KSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPL  219 (615)
T ss_pred             ------cCCCeeEEeeeccCchHHHHHHHHhCCCcch-hcccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCCchH
Confidence                  4588999999999999999999999999997 99999999999999999999  88889988764 66799999


Q ss_pred             HHHHhcCCCCCccccccHHHHHHHHHcC
Q 048228          258 HMVVAGFRSPGFRRVDHQIQLMEQLVSG  285 (629)
Q Consensus       258 h~A~~~~~~~~~~~~~~~~eivk~Ll~~  285 (629)
                      ..|+..          |+.++|++|++.
T Consensus       220 ~~Aa~t----------G~~~iVe~L~~~  237 (615)
T KOG0508|consen  220 LLAAVT----------GHTDIVERLLQC  237 (615)
T ss_pred             HHHhhh----------cchHHHHHHhcC
Confidence            999994          899999999853


No 37 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=1.5e-31  Score=279.85  Aligned_cols=208  Identities=25%  Similarity=0.294  Sum_probs=188.0

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccc
Q 048228          101 GGWLLYTAASAGDVRFVKELLQR-DPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDS  179 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~-g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~  179 (629)
                      -.+-++.|++.|+++.|+.|++. +.. ++..|.+|.|+||+| +.+++.+++++|+++||++|...+..          
T Consensus        44 ~~~~~v~A~q~G~l~~v~~lve~~g~~-v~~~D~~g~tlLHWA-AiNNrl~v~r~li~~gadvn~~gG~l----------  111 (600)
T KOG0509|consen   44 SLDDIVKATQYGELETVKELVESEGES-VNNPDREGVTLLHWA-AINNRLDVARYLISHGADVNAIGGVL----------  111 (600)
T ss_pred             hhhhhhhHhhcchHHHHHHHHhhcCcC-CCCCCcCCccceeHH-HHcCcHHHHHHHHHcCCCccccCCCC----------
Confidence            45578999999999999999999 555 688899999999999 66799999999999999999876542          


Q ss_pred             hhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchH
Q 048228          180 YSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFL  257 (629)
Q Consensus       180 ~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpL  257 (629)
                              +.||||+|+++|++.+|++|+++|||++. +|.+|.+|||+|++.++.-+  +++..++|+|.+|.+|+|||
T Consensus       112 --------~stPLHWAar~G~~~vv~lLlqhGAdpt~-~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpL  182 (600)
T KOG0509|consen  112 --------GSTPLHWAARNGHISVVDLLLQHGADPTL-KDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPL  182 (600)
T ss_pred             --------CCCcchHHHHcCcHHHHHHHHHcCCCCce-ecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHH
Confidence                    56999999999999999999999999995 99999999999999999888  77777899999999999999


Q ss_pred             HHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCC-cCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCC
Q 048228          258 HMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTN-NNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEG  336 (629)
Q Consensus       258 h~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d-~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G  336 (629)
                      |+|+.          .++...+..|+..+     +.++.+| .+|+||||+|+..| +..++++|++ .|++.+.+|.+|
T Consensus       183 mwAay----------kg~~~~v~~LL~f~-----a~~~~~d~~~g~TpLHwa~~~g-N~~~v~Ll~~-g~~~~d~~~~~g  245 (600)
T KOG0509|consen  183 MWAAY----------KGFALFVRRLLKFG-----ASLLLTDDNHGNTPLHWAVVGG-NLTAVKLLLE-GGADLDKTNTNG  245 (600)
T ss_pred             HHHHH----------hcccHHHHHHHHhc-----ccccccccccCCchHHHHHhcC-CcceEehhhh-cCCcccccccCC
Confidence            99999          46666699999988     6788888 89999999999999 9999997777 999999999999


Q ss_pred             CcHHHHHHhC
Q 048228          337 MTPLDLLKQH  346 (629)
Q Consensus       337 ~TpLh~A~~~  346 (629)
                      .||+.+|.+.
T Consensus       246 ~tp~~LA~~~  255 (600)
T KOG0509|consen  246 KTPFDLAQER  255 (600)
T ss_pred             CCHHHHHHHh
Confidence            9999999777


No 38 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=2e-31  Score=278.79  Aligned_cols=207  Identities=24%  Similarity=0.253  Sum_probs=190.1

Q ss_pred             CCHHHHHHHHcCCHHHHHHHHHc-CCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCc
Q 048228          136 VTDILYAAARSKNSEVFRLLLDN-AVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENV  214 (629)
Q Consensus       136 ~tpL~~AA~~~g~~~iv~~Ll~~-Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~  214 (629)
                      .+.++.| ++.|..+.++.|++. |.+++..                   |++|.|+||+|+.+++++++++||++|+++
T Consensus        45 ~~~~v~A-~q~G~l~~v~~lve~~g~~v~~~-------------------D~~g~tlLHWAAiNNrl~v~r~li~~gadv  104 (600)
T KOG0509|consen   45 LDDIVKA-TQYGELETVKELVESEGESVNNP-------------------DREGVTLLHWAAINNRLDVARYLISHGADV  104 (600)
T ss_pred             hhhhhhH-hhcchHHHHHHHHhhcCcCCCCC-------------------CcCCccceeHHHHcCcHHHHHHHHHcCCCc
Confidence            3456666 888999999999999 8877754                   456889999999999999999999999999


Q ss_pred             ccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchh
Q 048228          215 LAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKD  292 (629)
Q Consensus       215 ~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a  292 (629)
                      |..-...+.||||+|+++|++.+  +|+++|||++.+|.+|.||||.|+.          .++.-+|-+||..+     +
T Consensus       105 n~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~----------~~~~~~vayll~~~-----~  169 (600)
T KOG0509|consen  105 NAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQ----------FGHTALVAYLLSKG-----A  169 (600)
T ss_pred             cccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHH----------hCchHHHHHHHHhc-----c
Confidence            98555899999999999999999  9999999999999999999999999          59999999999999     6


Q ss_pred             hhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCC-CCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCC
Q 048228          293 IINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQD-GEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDN  371 (629)
Q Consensus       293 ~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d-~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~  371 (629)
                      ++|.+|.+|+||||+|+..+ +...+..||+ .|++++.+| .+|+||||+|+..|+..    .+.+|++.|++.+.+|.
T Consensus       170 d~d~~D~~grTpLmwAaykg-~~~~v~~LL~-f~a~~~~~d~~~g~TpLHwa~~~gN~~----~v~Ll~~g~~~~d~~~~  243 (600)
T KOG0509|consen  170 DIDLRDNNGRTPLMWAAYKG-FALFVRRLLK-FGASLLLTDDNHGNTPLHWAVVGGNLT----AVKLLLEGGADLDKTNT  243 (600)
T ss_pred             cCCCcCCCCCCHHHHHHHhc-ccHHHHHHHH-hcccccccccccCCchHHHHHhcCCcc----eEehhhhcCCccccccc
Confidence            79999999999999999999 6666999999 999999998 89999999999999998    67788889999999999


Q ss_pred             CCccHHHHHHHh
Q 048228          372 VARNAIACHLKG  383 (629)
Q Consensus       372 ~G~TpL~~A~~~  383 (629)
                      +|.||+.+|..+
T Consensus       244 ~g~tp~~LA~~~  255 (600)
T KOG0509|consen  244 NGKTPFDLAQER  255 (600)
T ss_pred             CCCCHHHHHHHh
Confidence            999999999655


No 39 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.96  E-value=4.4e-30  Score=277.13  Aligned_cols=319  Identities=17%  Similarity=0.115  Sum_probs=289.0

Q ss_pred             CcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccc-cc
Q 048228           20 ASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLI-RA   98 (629)
Q Consensus        20 ~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~-~d   98 (629)
                      .|+|-.||+.||.|+|++|+..|+++..++            ..|.+||.+|+-.|+..+++.|+.    +-+++.. .|
T Consensus       758 ~t~LT~acaggh~e~vellv~rganiehrd------------kkgf~plImaatagh~tvV~~llk----~ha~veaQsd  821 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANIEHRD------------KKGFVPLIMAATAGHITVVQDLLK----AHADVEAQSD  821 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccccccc------------cccchhhhhhcccCchHHHHHHHh----hhhhhhhhcc
Confidence            599999999999999999999999997644            779999999999999999999998    7777764 46


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      ..+.|+|-+||..|..++|++||..|+.. ..++...+|||-+| ...|..+||.+||.+|+.+|..++.          
T Consensus       822 rtkdt~lSlacsggr~~vvelLl~~gank-ehrnvsDytPlsla-~Sggy~~iI~~llS~GseInSrtgS----------  889 (2131)
T KOG4369|consen  822 RTKDTMLSLACSGGRTRVVELLLNAGANK-EHRNVSDYTPLSLA-RSGGYTKIIHALLSSGSEINSRTGS----------  889 (2131)
T ss_pred             cccCceEEEecCCCcchHHHHHHHhhccc-cccchhhcCchhhh-cCcchHHHHHHHhhccccccccccc----------
Confidence            78999999999999999999999999984 67888899999998 8889999999999999999987765          


Q ss_pred             chhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCch
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTF  256 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~Tp  256 (629)
                             +.|-.||++|..+|+.+.++.||+.|.|+|.....+.+|+|-+|+..|+.++  +|+...+++..+-+.|.||
T Consensus       890 -------klgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltp  962 (2131)
T KOG4369|consen  890 -------KLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTP  962 (2131)
T ss_pred             -------ccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcc
Confidence                   4477999999999999999999999999999888899999999999999999  8888899999999999999


Q ss_pred             HHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCC--cCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC
Q 048228          257 LHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTN--NNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG  334 (629)
Q Consensus       257 Lh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d--~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~  334 (629)
                      |+-++.+          |.+|+=.+||..|     ||+|+--  ..-.|+|-+++..| |...|+.|+. ..+-+..+|.
T Consensus       963 lme~Asg----------Gyvdvg~~li~~g-----ad~nasPvp~T~dtalti~a~kG-h~kfv~~lln-~~atv~v~Nk 1025 (2131)
T KOG4369|consen  963 LMEMASG----------GYVDVGNLLIAAG-----ADTNASPVPNTWDTALTIPANKG-HTKFVPKLLN-GDATVRVPNK 1025 (2131)
T ss_pred             cchhhcC----------Cccccchhhhhcc-----cccccCCCCCcCCccceeecCCC-chhhhHHhhC-CccceecccC
Confidence            9999994          9999999999999     5566533  34559999999999 9999999999 9999999999


Q ss_pred             CCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHH
Q 048228          335 EGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLY  404 (629)
Q Consensus       335 ~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~  404 (629)
                      +|.|+|-+|+..|+..    .+.+|++++||++..|+...++++-|++.+          +.+||++...
T Consensus      1026 kG~T~Lwla~~Gg~ls----s~~il~~~~ad~d~qdnr~~S~~maafRKg----------h~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1026 KGCTVLWLASAGGALS----SCPILVSSVADADQQDNRTNSRTMAAFRKG----------HFAIVKKMVP 1081 (2131)
T ss_pred             CCCcccchhccCCccc----cchHHhhcccChhhhhcccccccHHHHHhc----------hhheeccccC
Confidence            9999999999999998    899999999999999999999999999887          4666666543


No 40 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96  E-value=2.7e-28  Score=254.55  Aligned_cols=244  Identities=12%  Similarity=0.003  Sum_probs=198.0

Q ss_pred             HHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCcc-----ccCCCCCCCHHHHHHHH--cCCHH
Q 048228           78 VARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLV-----FGEGEYGVTDILYAAAR--SKNSE  150 (629)
Q Consensus        78 ~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~-----~~~d~~g~tpL~~AA~~--~g~~~  150 (629)
                      ..-++++.    +|+++|.+..+|     +|+..+..|++++|+.+|++.+     ...+..++|+||++ +.  .|+.+
T Consensus        63 ~~~~~~~~----~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~-~~n~~n~~e  132 (437)
T PHA02795         63 VLYDYFRI----HRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYY-LSNAYVEID  132 (437)
T ss_pred             HHHHHHHH----cCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHH-HHhcCCCHH
Confidence            44566677    899999888777     8999999999999999998842     15778899999998 44  69999


Q ss_pred             HHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHH
Q 048228          151 VFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSAS  230 (629)
Q Consensus       151 iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~  230 (629)
                      +|++|+++||+++...                     +.||||.|+..++.+++++|+++|++...    .+.+|++.  
T Consensus       133 iV~~LI~~GADIn~~~---------------------~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n----~~~~~l~~--  185 (437)
T PHA02795        133 IVDFMVDHGAVIYKIE---------------------CLNAYFRGICKKESSVVEFILNCGIPDEN----DVKLDLYK--  185 (437)
T ss_pred             HHHHHHHCCCCCCCCC---------------------CCCHHHHHHHcCcHHHHHHHHhcCCcccc----cccchhhh--
Confidence            9999999999998532                     35899999999999999999999985432    12234332  


Q ss_pred             hcCCcceecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHH
Q 048228          231 GRGQVEVLIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVS  310 (629)
Q Consensus       231 ~~g~~~ilL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~  310 (629)
                                          ..+.|++|.|+.          .++.+++++|+++|     |++|.+|..|+||||+|+.
T Consensus       186 --------------------~~~~t~l~~a~~----------~~~~eIve~LIs~G-----ADIN~kD~~G~TpLh~Aa~  230 (437)
T PHA02795        186 --------------------IIQYTRGFLVDE----------PTVLEIYKLCIPYI-----EDINQLDAGGRTLLYRAIY  230 (437)
T ss_pred             --------------------hhccchhHHHHh----------cCHHHHHHHHHhCc-----CCcCcCCCCCCCHHHHHHH
Confidence                                246689999998          58999999999999     7799999999999999999


Q ss_pred             cCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCC----chHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCC
Q 048228          311 ENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRS----ASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGI  386 (629)
Q Consensus       311 ~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~----~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~  386 (629)
                      .| +.+++++|++ +|+++|.+|..|+||||+|+..|+.    ..-.+++++|+++|++++..+..   .+     ... 
T Consensus       231 ~g-~~eiVelLL~-~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~~~---~~-----~~~-  299 (437)
T PHA02795        231 AG-YIDLVSWLLE-NGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIKLA---IL-----NNT-  299 (437)
T ss_pred             cC-CHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchhHH---hh-----hcc-
Confidence            99 9999999999 9999999999999999999999853    11234999999999999875432   22     111 


Q ss_pred             CCCCCCCCChhhHHHHHHcCCCCc
Q 048228          387 GVSPGSSFRVPDAEIFLYTGIENA  410 (629)
Q Consensus       387 ~~~~~~~~~~~~v~~LL~~Gad~~  410 (629)
                            ..+.++++.|+.++..++
T Consensus       300 ------~~n~~~ik~lI~y~~~ld  317 (437)
T PHA02795        300 ------IENHDVIKLCIKYFMMVD  317 (437)
T ss_pred             ------cchHHHHHHHHHHHHhcc
Confidence                  115789999999887654


No 41 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=5.4e-28  Score=234.80  Aligned_cols=177  Identities=13%  Similarity=0.144  Sum_probs=155.0

Q ss_pred             hccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC--Ccce--ecccCCCCccccC-CCCCchHHHH
Q 048228          186 EMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRG--QVEV--LIAKSPSLISVTN-SHGDTFLHMV  260 (629)
Q Consensus       186 ~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g--~~~i--lL~~~gadin~~d-~~g~TpLh~A  260 (629)
                      ..+.||||+|+..|+.++|+.|++.   ++. .+..|.||||+|+..+  +.++  +|++.|++++.++ ..|.||||+|
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~---~n~-~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF---VND-CNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh---hhc-cCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence            3457999999999999999999986   443 7889999999999865  6676  8889999999997 5899999998


Q ss_pred             HhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHc--CCcHHHHHHHhcCCCCCcccCCCCCCc
Q 048228          261 VAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSE--NIQCNLVELLMTVPSINLNIQDGEGMT  338 (629)
Q Consensus       261 ~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~--~~~~~iv~~Ll~~~gadvn~~d~~G~T  338 (629)
                      +....       .++.+++++|+++|     +++|.+|..|.||||+|+..  + +.+++++|++ .|+++|.+|.+|.|
T Consensus        95 ~~~~~-------~~~~eiv~~Ll~~g-----adin~~d~~G~TpLh~a~~~~~~-~~~iv~~Li~-~gadin~~d~~g~t  160 (209)
T PHA02859         95 LSFNK-------NVEPEILKILIDSG-----SSITEEDEDGKNLLHMYMCNFNV-RINVIKLLID-SGVSFLNKDFDNNN  160 (209)
T ss_pred             HHhCc-------cccHHHHHHHHHCC-----CCCCCcCCCCCCHHHHHHHhccC-CHHHHHHHHH-cCCCcccccCCCCc
Confidence            76311       25799999999999     77999999999999999863  5 8999999999 99999999999999


Q ss_pred             HHHH-HHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhC
Q 048228          339 PLDL-LKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       339 pLh~-A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~  384 (629)
                      |||. |+..++.+    ++++|+++|++++.+|..|+|||++|..+.
T Consensus       161 ~Lh~~a~~~~~~~----iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        161 ILYSYILFHSDKK----IFDFLTSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHHHHHhcCCHH----HHHHHHHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            9996 45666666    999999999999999999999999998765


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.95  E-value=6.2e-28  Score=251.87  Aligned_cols=217  Identities=11%  Similarity=-0.016  Sum_probs=183.5

Q ss_pred             HHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcc------cccCCCCCc
Q 048228          151 VFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVL------AYRDVQGST  224 (629)
Q Consensus       151 iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~------~~~d~~g~T  224 (629)
                      .-++++.+|++++...                   .+|     +|+..+..|++++|+.+|++++      . ++..++|
T Consensus        64 ~~~~~~~~~~~i~~~~-------------------~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~-~~~~~~~  118 (437)
T PHA02795         64 LYDYFRIHRDNIDQYI-------------------VDR-----LFAYITYKDIISALVSKNYMEDIFSIIIK-NCNSVQD  118 (437)
T ss_pred             HHHHHHHcCcchhhhh-------------------hhh-----HHhhcchHHHHHHHHhcccccchhhhhhh-ccccccH
Confidence            3478999999887542                   112     8999999999999999999988      5 7888999


Q ss_pred             HHHHHHh--cCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccC---
Q 048228          225 ILHSASG--RGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVT---  297 (629)
Q Consensus       225 pLh~A~~--~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~---  297 (629)
                      +||+|+.  .|+.++  +|+.+||+++..  ++.||||.|+.          .++.+++++|+++| ++   +.+..   
T Consensus       119 ~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~----------~~~~eIVk~Lls~G-a~---~~n~~~~~  182 (437)
T PHA02795        119 LLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGIC----------KKESSVVEFILNCG-IP---DENDVKLD  182 (437)
T ss_pred             HHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHH----------cCcHHHHHHHHhcC-Cc---ccccccch
Confidence            9999999  777777  888999999985  45899999998          58999999999999 32   12222   


Q ss_pred             --CcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCcc
Q 048228          298 --NNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARN  375 (629)
Q Consensus       298 --d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~T  375 (629)
                        +..+.|++|.|+..+ +.+++++|++ +|+|+|.+|..|.||||+|+..|+.+    ++++|+++||++|.+|..|+|
T Consensus       183 l~~~~~~t~l~~a~~~~-~~eIve~LIs-~GADIN~kD~~G~TpLh~Aa~~g~~e----iVelLL~~GAdIN~~d~~G~T  256 (437)
T PHA02795        183 LYKIIQYTRGFLVDEPT-VLEIYKLCIP-YIEDINQLDAGGRTLLYRAIYAGYID----LVSWLLENGANVNAVMSNGYT  256 (437)
T ss_pred             hhhhhccchhHHHHhcC-HHHHHHHHHh-CcCCcCcCCCCCCCHHHHHHHcCCHH----HHHHHHHCCCCCCCcCCCCCC
Confidence              245789999999999 9999999999 99999999999999999999999988    999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccC
Q 048228          376 AIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICD  416 (629)
Q Consensus       376 pL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g  416 (629)
                      |||+|+..+......+  .+.+++++|+++|++++.....+
T Consensus       257 pLh~Aa~~g~~~~~~~--~~~eIvelLL~~gadI~~~~~~~  295 (437)
T PHA02795        257 CLDVAVDRGSVIARRE--THLKILEILLREPLSIDCIKLAI  295 (437)
T ss_pred             HHHHHHHcCCcccccc--cHHHHHHHHHhCCCCCCchhHHh
Confidence            9999998763211111  15799999999999998765443


No 43 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.95  E-value=1.7e-28  Score=264.90  Aligned_cols=310  Identities=15%  Similarity=0.129  Sum_probs=276.0

Q ss_pred             hccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCC
Q 048228           57 RLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGV  136 (629)
Q Consensus        57 ~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~  136 (629)
                      +-++.-+-+|+|-.||.+|+.+++.+|+.    .|+++..+|..|.+||.+|+-.||..+|+.||.+.+++....|..+.
T Consensus       750 d~~Te~n~~t~LT~acaggh~e~vellv~----rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkd  825 (2131)
T KOG4369|consen  750 DPLTEPNIKTNLTSACAGGHREEVELLVV----RGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKD  825 (2131)
T ss_pred             ccccCccccccccccccCccHHHHHHHHH----hcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccC
Confidence            33455667899999999999999999999    99999999999999999999999999999999999998778899999


Q ss_pred             CHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCccc
Q 048228          137 TDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLA  216 (629)
Q Consensus       137 tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~  216 (629)
                      |+|-+| |..|..++|++||.+|++-...+-                   ...|||-+|...|..++|..||.+|+.++.
T Consensus       826 t~lSla-csggr~~vvelLl~~gankehrnv-------------------sDytPlsla~Sggy~~iI~~llS~GseInS  885 (2131)
T KOG4369|consen  826 TMLSLA-CSGGRTRVVELLLNAGANKEHRNV-------------------SDYTPLSLARSGGYTKIIHALLSSGSEINS  885 (2131)
T ss_pred             ceEEEe-cCCCcchHHHHHHHhhccccccch-------------------hhcCchhhhcCcchHHHHHHHhhccccccc
Confidence            999998 888999999999999985443321                   135999999999999999999999999986


Q ss_pred             c-cCCCCCcHHHHHHhcCCcce--ecccCCCCccccC-CCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchh
Q 048228          217 Y-RDVQGSTILHSASGRGQVEV--LIAKSPSLISVTN-SHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKD  292 (629)
Q Consensus       217 ~-~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d-~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a  292 (629)
                      . -.+.|..||++|.++|+...  +|++.|.|+|+.- .+-+|+|-+|+.          .|..|++.+||...     +
T Consensus       886 rtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~f----------qgr~evv~lLLa~~-----a  950 (2131)
T KOG4369|consen  886 RTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALF----------QGRPEVVFLLLAAQ-----A  950 (2131)
T ss_pred             ccccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccc----------cCcchHHHHHHHHh-----h
Confidence            2 34679999999999999888  8888999999864 467899999998          59999999999988     7


Q ss_pred             hhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccC--CCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCC
Q 048228          293 IINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQ--DGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQD  370 (629)
Q Consensus       293 ~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~--d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d  370 (629)
                      ++..+-+.|.|||+-++..| .+++=++||. .|+|+|+-  -....|+|-+++..|+..    .+.+|+...|.+..++
T Consensus       951 nvehRaktgltplme~AsgG-yvdvg~~li~-~gad~nasPvp~T~dtalti~a~kGh~k----fv~~lln~~atv~v~N 1024 (2131)
T KOG4369|consen  951 NVEHRAKTGLTPLMEMASGG-YVDVGNLLIA-AGADTNASPVPNTWDTALTIPANKGHTK----FVPKLLNGDATVRVPN 1024 (2131)
T ss_pred             hhhhhcccCCcccchhhcCC-ccccchhhhh-cccccccCCCCCcCCccceeecCCCchh----hhHHhhCCccceeccc
Confidence            79999999999999999999 9999999999 99999975  234569999999999988    8999999999999999


Q ss_pred             CCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccCCChhh
Q 048228          371 NVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASVE  421 (629)
Q Consensus       371 ~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~  421 (629)
                      ++|.|+|.+|+..+          ....+++|++++||++..|+.-.+.+.
T Consensus      1025 kkG~T~Lwla~~Gg----------~lss~~il~~~~ad~d~qdnr~~S~~m 1065 (2131)
T KOG4369|consen 1025 KKGCTVLWLASAGG----------ALSSCPILVSSVADADQQDNRTNSRTM 1065 (2131)
T ss_pred             CCCCcccchhccCC----------ccccchHHhhcccChhhhhcccccccH
Confidence            99999999998765          588999999999999998877666554


No 44 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.95  E-value=1.8e-26  Score=224.17  Aligned_cols=175  Identities=15%  Similarity=0.063  Sum_probs=151.0

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcC--cHHHHHHHhhcccccCCCccc
Q 048228           19 YASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCR--SSVARKLLHDCETKKGHNSLI   96 (629)
Q Consensus        19 g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~--~~~i~~lL~~~~~~~g~~~~~   96 (629)
                      +.||||+|+..|+.++|+.|++.+...               ...|.||||+|+..+  +.+++++|++    +|++++.
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~~n~~---------------~~~g~TpLh~a~~~~~~~~eiv~~Ll~----~gadvn~   81 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKFVNDC---------------NDLYETPIFSCLEKDKVNVEILKFLIE----NGADVNF   81 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHhhhcc---------------CccCCCHHHHHHHcCCCCHHHHHHHHH----CCCCCCc
Confidence            469999999999999999999864322               256899999999864  8999999999    9999999


Q ss_pred             cc-CCCChHHHHHHHc---CCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHH-cCCHHHHHHHHHcCCCCccccCCCCc
Q 048228           97 RA-GYGGWLLYTAASA---GDVRFVKELLQRDPLLVFGEGEYGVTDILYAAAR-SKNSEVFRLLLDNAVAPRCCLSSGGE  171 (629)
Q Consensus        97 ~d-~~g~tpLh~A~~~---g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~-~g~~~iv~~Ll~~Ga~~~~~~~~~~~  171 (629)
                      ++ ..|.||||+|+..   ++.+++++|+++|++ ++.+|..|.||||+|+.. .++.+++++|+++|++++..      
T Consensus        82 ~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gad-in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~------  154 (209)
T PHA02859         82 KTRDNNLSALHHYLSFNKNVEPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNK------  154 (209)
T ss_pred             cCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc------
Confidence            97 4899999998864   479999999999998 588999999999998443 47899999999999988754      


Q ss_pred             hhhhhccchhHHhhhccchHHHH-HHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcC
Q 048228          172 FEEKLSDSYSVFKWEMMNRAVHA-VARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRG  233 (629)
Q Consensus       172 ~~~~~~~~~~~~~d~~g~t~Lh~-A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g  233 (629)
                                   |..|.||||. |+..++.+++++|+++|++++. +|..|.||||+|..++
T Consensus       155 -------------d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~-~d~~g~tpl~la~~~~  203 (209)
T PHA02859        155 -------------DFDNNNILYSYILFHSDKKIFDFLTSLGIDINE-TNKSGYNCYDLIKFRN  203 (209)
T ss_pred             -------------cCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC-CCCCCCCHHHHHhhhh
Confidence                         4558899995 5678899999999999999995 9999999999998765


No 45 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92  E-value=1.9e-26  Score=210.18  Aligned_cols=236  Identities=23%  Similarity=0.260  Sum_probs=205.8

Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhc
Q 048228           98 AGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLS  177 (629)
Q Consensus        98 d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~  177 (629)
                      +..|..-+-.|...|+.+++..++...++.+...+..|+..++.+ +-+++.+++..+|.+|+..|..            
T Consensus        59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~-ap~~s~~k~sttltN~~rgnev------------  125 (296)
T KOG0502|consen   59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVA-APCGSVDKVSTTLTNGARGNEV------------  125 (296)
T ss_pred             HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhc-CCCCCcceeeeeecccccCCcc------------
Confidence            344666777888899999999888888887788888899999998 7778999999999999877744            


Q ss_pred             cchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCc
Q 048228          178 DSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDT  255 (629)
Q Consensus       178 ~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~T  255 (629)
                             +-.+++|+.+++...+++++..|.++  .+|. .|..|.|||.||+..|++.+  +|++.|+|+++..+...|
T Consensus       126 -------s~~p~s~~slsVhql~L~~~~~~~~n--~VN~-~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~res  195 (296)
T KOG0502|consen  126 -------SLMPWSPLSLSVHQLHLDVVDLLVNN--KVNA-CDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRES  195 (296)
T ss_pred             -------ccccCChhhHHHHHHHHHHHHHHhhc--cccC-ccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhh
Confidence                   34478999999999999988887765  4454 89999999999999999998  888999999999999999


Q ss_pred             hHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCC
Q 048228          256 FLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGE  335 (629)
Q Consensus       256 pLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~  335 (629)
                      +|.+|+++          |..+||++|+.++ +    |+|..|.+|-|||.||++.| +.++|+.||+ .|+|++..+..
T Consensus       196 ALsLAt~g----------gytdiV~lLL~r~-v----dVNvyDwNGgTpLlyAvrgn-hvkcve~Ll~-sGAd~t~e~ds  258 (296)
T KOG0502|consen  196 ALSLATRG----------GYTDIVELLLTRE-V----DVNVYDWNGGTPLLYAVRGN-HVKCVESLLN-SGADVTQEDDS  258 (296)
T ss_pred             hHhHHhcC----------ChHHHHHHHHhcC-C----CcceeccCCCceeeeeecCC-hHHHHHHHHh-cCCCccccccc
Confidence            99999994          8999999999999 4    49999999999999999999 9999999999 99999999999


Q ss_pred             CCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHH
Q 048228          336 GMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIA  378 (629)
Q Consensus       336 G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~  378 (629)
                      |.+++..|+..|+.     +|+..|++-++.+.+|..-+||+|
T Consensus       259 Gy~~mdlAValGyr-----~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  259 GYWIMDLAVALGYR-----IVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             CCcHHHHHHHhhhH-----HHHHHHHHHHHHHhhcccCCCCCC
Confidence            99999999999874     677788888888889988888864


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92  E-value=2.8e-26  Score=209.07  Aligned_cols=266  Identities=16%  Similarity=0.077  Sum_probs=220.1

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccch
Q 048228          101 GGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSY  180 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~  180 (629)
                      ....+..++..|-.+--+.|.......   ++..|..-+-.+ .+.++.+++..++....+....               
T Consensus        31 q~a~~~~~~~m~~t~p~~~l~~~~s~~---~~~lge~~~~~~-~~s~nsd~~v~s~~~~~~~~~~---------------   91 (296)
T KOG0502|consen   31 QIAELFEQVEMGTTEPRCALTAEISAL---RNALGESLLTVA-VRSGNSDVAVQSAQLDPDAIDE---------------   91 (296)
T ss_pred             HHHHHHHHhhccccchhHHHHHHHHHH---HHhcCCcccchh-hhcCCcHHHHHhhccCCCCCCC---------------
Confidence            334566666666665555555432222   222333333333 7778888888887655443322               


Q ss_pred             hHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccCCCCccccCCCCCchHHHH
Q 048228          181 SVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKSPSLISVTNSHGDTFLHMV  260 (629)
Q Consensus       181 ~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpLh~A  260 (629)
                         .+..|+.+++.|+-+++.+.+..+|.+|+..|. .+..+++|+.+++...+++..++.....+|..|+.|.|||.+|
T Consensus        92 ---t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne-vs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De~GfTpLiWA  167 (296)
T KOG0502|consen   92 ---TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE-VSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDEFGFTPLIWA  167 (296)
T ss_pred             ---CCchhhhhhhhcCCCCCcceeeeeecccccCCc-cccccCChhhHHHHHHHHHHHHHHhhccccCccccCchHhHHH
Confidence               234489999999999999999999999999996 9999999999999999888855555578999999999999999


Q ss_pred             HhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHH
Q 048228          261 VAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPL  340 (629)
Q Consensus       261 ~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpL  340 (629)
                      +.          .|++++|++|++.|     |+++...+...|+|.+|+..| ..+||++||+ .+.|||.-|-+|-|||
T Consensus       168 aa----------~G~i~vV~fLL~~G-----Adp~~lgk~resALsLAt~gg-ytdiV~lLL~-r~vdVNvyDwNGgTpL  230 (296)
T KOG0502|consen  168 AA----------KGHIPVVQFLLNSG-----ADPDALGKYRESALSLATRGG-YTDIVELLLT-REVDVNVYDWNGGTPL  230 (296)
T ss_pred             Hh----------cCchHHHHHHHHcC-----CChhhhhhhhhhhHhHHhcCC-hHHHHHHHHh-cCCCcceeccCCCcee
Confidence            99          59999999999999     779999999999999999999 9999999999 9999999999999999


Q ss_pred             HHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccCCChh
Q 048228          341 DLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASV  420 (629)
Q Consensus       341 h~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~  420 (629)
                      -+|++.++.+    +++.||+.|||++..+..|.+++..|+..+           ..+|+..++.-++....|+.-++++
T Consensus       231 lyAvrgnhvk----cve~Ll~sGAd~t~e~dsGy~~mdlAValG-----------yr~Vqqvie~h~lkl~Q~~~~~~~~  295 (296)
T KOG0502|consen  231 LYAVRGNHVK----CVESLLNSGADVTQEDDSGYWIMDLAVALG-----------YRIVQQVIEKHALKLCQDSEKRTPL  295 (296)
T ss_pred             eeeecCChHH----HHHHHHhcCCCcccccccCCcHHHHHHHhh-----------hHHHHHHHHHHHHHHhhcccCCCCC
Confidence            9999999988    999999999999999999999999999987           4689999998888887776666665


Q ss_pred             h
Q 048228          421 E  421 (629)
Q Consensus       421 ~  421 (629)
                      +
T Consensus       296 ~  296 (296)
T KOG0502|consen  296 H  296 (296)
T ss_pred             C
Confidence            3


No 47 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.92  E-value=9.1e-25  Score=252.18  Aligned_cols=290  Identities=18%  Similarity=0.137  Sum_probs=208.8

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHhhccccc--CCCcccccCCCChHHH-HHHHcCCHHHHHHHHhcCCCccccCCCCCCCHH
Q 048228           63 DDEEQFDDVAKCRSSVARKLLHDCETKK--GHNSLIRAGYGGWLLY-TAASAGDVRFVKELLQRDPLLVFGEGEYGVTDI  139 (629)
Q Consensus        63 ~~~t~Lh~A~~~~~~~i~~lL~~~~~~~--g~~~~~~d~~g~tpLh-~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL  139 (629)
                      +++..|+.|++.|+.+.++.+++    .  +.++|..|..|+|||| .|+..++.++++.|+++++     .+..|.|||
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~----~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~L   86 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLE----EPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLL   86 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhc----cccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHH
Confidence            46789999999999999998888    5  8899999999999999 8999999999999999986     577899999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccC
Q 048228          140 LYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRD  219 (629)
Q Consensus       140 ~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d  219 (629)
                      |.| +. +..+.++.++.+..+........     .............|.||||+||..|+.++|++|+++|++++. ++
T Consensus        87 h~A-~~-~~~~~v~~ll~~l~~~~~~~~~~-----~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~-~~  158 (743)
T TIGR00870        87 HAI-SL-EYVDAVEAILLHLLAAFRKSGPL-----ELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPA-RA  158 (743)
T ss_pred             HHH-Hh-ccHHHHHHHHHHHhhcccccCch-----hhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc-Cc
Confidence            988 44 33444444443322211110000     000000111234589999999999999999999999999984 33


Q ss_pred             CCCCcHHHHHHhcCCcceecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCc
Q 048228          220 VQGSTILHSASGRGQVEVLIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNN  299 (629)
Q Consensus       220 ~~g~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~  299 (629)
                      ... ...     .        ....   .....|.||||+|+.          .++.+++++|+++|     +|+|.+|.
T Consensus       159 ~~~-~~~-----~--------~~~~---~~~~~g~tpL~~Aa~----------~~~~~iv~lLl~~g-----adin~~d~  206 (743)
T TIGR00870       159 CGD-FFV-----K--------SQGV---DSFYHGESPLNAAAC----------LGSPSIVALLSEDP-----ADILTADS  206 (743)
T ss_pred             CCc-hhh-----c--------CCCC---CcccccccHHHHHHH----------hCCHHHHHHHhcCC-----cchhhHhh
Confidence            221 110     0        0111   123578999999999          59999999999999     77999999


Q ss_pred             CCchHHHHHHHcCC--------cHHHHHHHhcCCCCCc-------ccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCC
Q 048228          300 NGRTALHLAVSENI--------QCNLVELLMTVPSINL-------NIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGG  364 (629)
Q Consensus       300 ~g~TpLh~A~~~~~--------~~~iv~~Ll~~~gadv-------n~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Ga  364 (629)
                      .|+||||+|+..+.        ...+.+++++ .++..       +..|.+|.||||+|+..|+.+    ++++|++.++
T Consensus       207 ~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~-ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~----l~~lLL~~~~  281 (743)
T TIGR00870       207 LGNTLLHLLVMENEFKAEYEELSCQMYNFALS-LLDKLRDSKELEVILNHQGLTPLKLAAKEGRIV----LFRLKLAIKY  281 (743)
T ss_pred             hhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HHhccCChHhhhhhcCCCCCCchhhhhhcCCcc----HHHHHHHHHH
Confidence            99999999998741        2345666666 55554       677999999999999999999    8999999877


Q ss_pred             CCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCC
Q 048228          365 ISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIE  408 (629)
Q Consensus       365 dvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad  408 (629)
                      ...........|.+.+.....  +-++......++++|+..|+.
T Consensus       282 ~~kk~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~~~~  323 (743)
T TIGR00870       282 KQKKFVAWPNGQQLLSLYWLE--ELDGWRRKQSVLELIVVFVIG  323 (743)
T ss_pred             hcceeeccCcchHhHhhhccc--cCCcccccccHHHHHHHHHHh
Confidence            766667777788877765422  111211123567777777653


No 48 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.92  E-value=1e-24  Score=251.82  Aligned_cols=254  Identities=17%  Similarity=0.123  Sum_probs=191.7

Q ss_pred             CCChHHHHHHHcCCHHHHHHHHhc--CCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhc
Q 048228          100 YGGWLLYTAASAGDVRFVKELLQR--DPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLS  177 (629)
Q Consensus       100 ~g~tpLh~A~~~g~~~~v~~LL~~--g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~  177 (629)
                      .+...|+.||..|+.+.|+.+++.  +.+ ++..|..|.||||++|+.+++.+++++|+++|+                 
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~-in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----------------   77 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLN-INCPDRLGRSALFVAAIENENLELTELLLNLSC-----------------   77 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccC-CCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----------------
Confidence            467899999999999999999998  555 578899999999977799999999999999986                 


Q ss_pred             cchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccCCCCccccCCCCCchH
Q 048228          178 DSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKSPSLISVTNSHGDTFL  257 (629)
Q Consensus       178 ~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpL  257 (629)
                            ++..|.||||.|+. +..+.++.++....+...    .+ .++..+             .......+..|.|||
T Consensus        78 ------~~~~G~T~Lh~A~~-~~~~~v~~ll~~l~~~~~----~~-~~~~~~-------------~~~~~~~~~~G~TpL  132 (743)
T TIGR00870        78 ------RGAVGDTLLHAISL-EYVDAVEAILLHLLAAFR----KS-GPLELA-------------NDQYTSEFTPGITAL  132 (743)
T ss_pred             ------CCCcChHHHHHHHh-ccHHHHHHHHHHHhhccc----cc-Cchhhh-------------ccccccccCCCCcHH
Confidence                  12447899999987 344444444443322211    01 111100             011122345799999


Q ss_pred             HHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCC--------------cCCchHHHHHHHcCCcHHHHHHHhc
Q 048228          258 HMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTN--------------NNGRTALHLAVSENIQCNLVELLMT  323 (629)
Q Consensus       258 h~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d--------------~~g~TpLh~A~~~~~~~~iv~~Ll~  323 (629)
                      |+|+.          .++.++|++|+++|     |+++.++              ..|+||||+|+..+ +.+++++|++
T Consensus       133 hlAa~----------~~~~eiVklLL~~G-----Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~-~~~iv~lLl~  196 (743)
T TIGR00870       133 HLAAH----------RQNYEIVKLLLERG-----ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLG-SPSIVALLSE  196 (743)
T ss_pred             HHHHH----------hCCHHHHHHHHhCC-----CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhC-CHHHHHHHhc
Confidence            99999          59999999999999     5577543              35899999999999 9999999999


Q ss_pred             CCCCCcccCCCCCCcHHHHHHhCC-----CCchHHHHHHHHHHcCCCC-------CCCCCCCccHHHHHHHhCCCCCCCC
Q 048228          324 VPSINLNIQDGEGMTPLDLLKQHP-----RSASSEILIKQLISAGGIS-------NCQDNVARNAIACHLKGQGIGVSPG  391 (629)
Q Consensus       324 ~~gadvn~~d~~G~TpLh~A~~~~-----~~~~~~~lv~~Ll~~Gadv-------n~~d~~G~TpL~~A~~~~~~~~~~~  391 (629)
                       .|+|+|.+|..|+||||+|+..+     +.+....+.+++++.++..       +..|.+|.||||+|+..+       
T Consensus       197 -~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g-------  268 (743)
T TIGR00870       197 -DPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEG-------  268 (743)
T ss_pred             -CCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcC-------
Confidence             99999999999999999999987     3333444666677666654       678999999999999887       


Q ss_pred             CCCChhhHHHHHHcCCCCccccccCCChhhhh
Q 048228          392 SSFRVPDAEIFLYTGIENASDAICDAASVEYS  423 (629)
Q Consensus       392 ~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~~a  423 (629)
                         +.+++++|++.+++.........++...+
T Consensus       269 ---~~~l~~lLL~~~~~~kk~~a~~~~~~~~~  297 (743)
T TIGR00870       269 ---RIVLFRLKLAIKYKQKKFVAWPNGQQLLS  297 (743)
T ss_pred             ---CccHHHHHHHHHHhcceeeccCcchHhHh
Confidence               68999999997766444444444444433


No 49 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92  E-value=1.1e-24  Score=230.67  Aligned_cols=241  Identities=21%  Similarity=0.223  Sum_probs=186.7

Q ss_pred             HHHHHHcCCHHHHHHHHhcC------------CCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCch
Q 048228          105 LYTAASAGDVRFVKELLQRD------------PLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEF  172 (629)
Q Consensus       105 Lh~A~~~g~~~~v~~LL~~g------------~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~  172 (629)
                      |.-|+..|+.+.|..||+..            .+.++..|.+|.|.||+| +.+|+.+++++|+++.+-++         
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha-~Lng~~~is~llle~ea~ld---------   76 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHA-VLNGQNQISKLLLDYEALLD---------   76 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHH-HhcCchHHHHHHhcchhhhh---------
Confidence            55677777777777777642            133456677777877777 56677788888777655333         


Q ss_pred             hhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccC
Q 048228          173 EEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTN  250 (629)
Q Consensus       173 ~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d  250 (629)
                                ..|..|.+|||+|+..|+.++|+.|+.++..+|. .+..|.||||.|++.|+.++  +|+.+|+|+-.+|
T Consensus        77 ----------l~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na-~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~n  145 (854)
T KOG0507|consen   77 ----------LCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA-VNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRN  145 (854)
T ss_pred             ----------hhhccCcceEEehhhcCcchHHHHHHhcccCCCc-ccccCcCccchhhhhcchHHHHHHHhcCCCccccC
Confidence                      3344567788888888888888888777766664 77777888888888888777  7777778888888


Q ss_pred             CCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhh----hccCCcCCchHHHHHHHcCCcHHHHHHHhcCCC
Q 048228          251 SHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDI----INVTNNNGRTALHLAVSENIQCNLVELLMTVPS  326 (629)
Q Consensus       251 ~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~----in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~g  326 (629)
                      ..+.|+|-+|++          .|..++++.|++.. +++...    -..++..+.+|||.|+.+| +.++++.|++ +|
T Consensus       146 ns~~t~ldlA~q----------fgr~~Vvq~ll~~~-~~~~~~~~~~~~~~~~~~~~plHlaakng-h~~~~~~ll~-ag  212 (854)
T KOG0507|consen  146 NSKETVLDLASR----------FGRAEVVQMLLQKK-FPVQSSLRVGDIKRPFPAIYPLHLAAKNG-HVECMQALLE-AG  212 (854)
T ss_pred             cccccHHHHHHH----------hhhhHHHHHHhhhc-cchhhcccCCCCCCCCCCcCCcchhhhcc-hHHHHHHHHh-cC
Confidence            888888888887          57888888887763 332111    1234557789999999999 9999999999 99


Q ss_pred             CCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhC
Q 048228          327 INLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       327 advn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~  384 (629)
                      +|+|.....| |+||.|+..|..+    ++.+|++.|++...+|.+|+|+|.+.....
T Consensus       213 ~din~~t~~g-talheaalcgk~e----vvr~ll~~gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  213 FDINYTTEDG-TALHEAALCGKAE----VVRFLLEIGINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             CCcccccccc-hhhhhHhhcCcch----hhhHHHhhccccccccccchHHHHHHHhcc
Confidence            9999998877 9999999999999    999999999999999999999998877654


No 50 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91  E-value=5.8e-24  Score=246.90  Aligned_cols=172  Identities=19%  Similarity=0.252  Sum_probs=158.3

Q ss_pred             ccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcC
Q 048228          187 MMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGF  264 (629)
Q Consensus       187 ~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~  264 (629)
                      .+.++||.||..|+.++++.|++.|+|++. .|..|.||||+|+..|+.++  +|++.|+++|.+|.+|+||||+|+.  
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~-~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~--  600 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAKLDPDI-GDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS--  600 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH--
Confidence            456899999999999999999999999996 99999999999999999999  7888999999999999999999999  


Q ss_pred             CCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHH
Q 048228          265 RSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLK  344 (629)
Q Consensus       265 ~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~  344 (629)
                              .++.+++++|++.+     +..  ....|.++||+|+..| +.+++++|++ +|+|+|.+|.+|.||||+|+
T Consensus       601 --------~g~~~iv~~L~~~~-----~~~--~~~~~~~~L~~Aa~~g-~~~~v~~Ll~-~Gadin~~d~~G~TpLh~A~  663 (823)
T PLN03192        601 --------AKHHKIFRILYHFA-----SIS--DPHAAGDLLCTAAKRN-DLTAMKELLK-QGLNVDSEDHQGATALQVAM  663 (823)
T ss_pred             --------hCCHHHHHHHHhcC-----ccc--CcccCchHHHHHHHhC-CHHHHHHHHH-CCCCCCCCCCCCCCHHHHHH
Confidence                    59999999999887     222  2356789999999999 9999999999 99999999999999999999


Q ss_pred             hCCCCchHHHHHHHHHHcCCCCCCCCCCC-ccHHHHHHH
Q 048228          345 QHPRSASSEILIKQLISAGGISNCQDNVA-RNAIACHLK  382 (629)
Q Consensus       345 ~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G-~TpL~~A~~  382 (629)
                      ..|+.+    ++++|+++|||++..|..| .||+.++..
T Consensus       664 ~~g~~~----iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        664 AEDHVD----MVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             HCCcHH----HHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            999988    9999999999999999988 899766543


No 51 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.90  E-value=1.9e-23  Score=242.61  Aligned_cols=197  Identities=16%  Similarity=0.164  Sum_probs=172.6

Q ss_pred             cCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccH
Q 048228          198 GGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQ  275 (629)
Q Consensus       198 ~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~  275 (629)
                      ....++-.+|.+.+...   .+..+.++||.||..|+.++  .|++.|+++|..|..|+||||+|+.          .|+
T Consensus       504 l~~l~v~~ll~~~~~~~---~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~----------~g~  570 (823)
T PLN03192        504 LHDLNVGDLLGDNGGEH---DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAAS----------KGY  570 (823)
T ss_pred             hccccHHHHHhhccccc---CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH----------cCh
Confidence            34455556666655432   45567899999999999888  7778999999999999999999999          599


Q ss_pred             HHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHH
Q 048228          276 IQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEIL  355 (629)
Q Consensus       276 ~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~l  355 (629)
                      .+++++|+++|     +++|.+|.+|+||||+|+..+ +.+++++|++ .++..+.  ..|.++||.|+..|+.+    +
T Consensus       571 ~~~v~~Ll~~g-----adin~~d~~G~TpL~~A~~~g-~~~iv~~L~~-~~~~~~~--~~~~~~L~~Aa~~g~~~----~  637 (823)
T PLN03192        571 EDCVLVLLKHA-----CNVHIRDANGNTALWNAISAK-HHKIFRILYH-FASISDP--HAAGDLLCTAAKRNDLT----A  637 (823)
T ss_pred             HHHHHHHHhcC-----CCCCCcCCCCCCHHHHHHHhC-CHHHHHHHHh-cCcccCc--ccCchHHHHHHHhCCHH----H
Confidence            99999999999     679999999999999999999 9999999999 7776653  45779999999999988    9


Q ss_pred             HHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCccccccC-CChhhhhhhhccCC
Q 048228          356 IKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDAICD-AASVEYSSCLSEQS  430 (629)
Q Consensus       356 v~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g-~t~~~~a~~~~e~g  430 (629)
                      +++|+++|+|+|.+|.+|+||||+|+..+          +.+++++|+++|||++..+..| .++.+++..+.+.+
T Consensus       638 v~~Ll~~Gadin~~d~~G~TpLh~A~~~g----------~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~~~~~  703 (823)
T PLN03192        638 MKELLKQGLNVDSEDHQGATALQVAMAED----------HVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRE  703 (823)
T ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCC----------cHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHHHHhh
Confidence            99999999999999999999999999887          6999999999999999999888 88888886655443


No 52 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90  E-value=1.1e-23  Score=223.13  Aligned_cols=242  Identities=23%  Similarity=0.260  Sum_probs=203.3

Q ss_pred             HHHHHHhcCcHHHHHHHhhccc-cc--------CCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCC
Q 048228           67 QFDDVAKCRSSVARKLLHDCET-KK--------GHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVT  137 (629)
Q Consensus        67 ~Lh~A~~~~~~~i~~lL~~~~~-~~--------g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~t  137 (629)
                      =|..|++.+..+.+.+|++... ++        ..+.|..|.+|.|+||.||.+|+.+++++|++..+. ....|..|.+
T Consensus         6 el~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~-ldl~d~kg~~   84 (854)
T KOG0507|consen    6 ELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-LDLCDTKGIL   84 (854)
T ss_pred             hHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhh-hhhhhccCcc
Confidence            4667888888888888776211 11        246778889999999999999999999999999876 4778899999


Q ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccc
Q 048228          138 DILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAY  217 (629)
Q Consensus       138 pL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~  217 (629)
                      |||+| ++.|+.+++++|+.++..+|..+-                   .|.||||.|+..|+.++|.+||.+|+|.. .
T Consensus        85 plhla-aw~g~~e~vkmll~q~d~~na~~~-------------------e~~tplhlaaqhgh~dvv~~Ll~~~adp~-i  143 (854)
T KOG0507|consen   85 PLHLA-AWNGNLEIVKMLLLQTDILNAVNI-------------------ENETPLHLAAQHGHLEVVFYLLKKNADPF-I  143 (854)
T ss_pred             eEEeh-hhcCcchHHHHHHhcccCCCcccc-------------------cCcCccchhhhhcchHHHHHHHhcCCCcc-c
Confidence            99998 889999999999999966665543                   36799999999999999999999999998 4


Q ss_pred             cCCCCCcHHHHHHhcCCcce--ecccCCCC--------ccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCC
Q 048228          218 RDVQGSTILHSASGRGQVEV--LIAKSPSL--------ISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKI  287 (629)
Q Consensus       218 ~d~~g~TpLh~A~~~g~~~i--lL~~~gad--------in~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~  287 (629)
                      ++..+.|+|.+|++.|..++  +|+....+        -..++-.+-+|||.|+.          +|+.++++.|++.| 
T Consensus       144 ~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaak----------ngh~~~~~~ll~ag-  212 (854)
T KOG0507|consen  144 RNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAK----------NGHVECMQALLEAG-  212 (854)
T ss_pred             cCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhh----------cchHHHHHHHHhcC-
Confidence            99999999999999999988  22111111        23445678899999999          69999999999999 


Q ss_pred             CcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCC
Q 048228          288 VEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPR  348 (629)
Q Consensus       288 ~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~  348 (629)
                      +|    +|.....| |+||.|+..| ..++|.+|++ .|++..++|.+|+|+|.+......
T Consensus       213 ~d----in~~t~~g-talheaalcg-k~evvr~ll~-~gin~h~~n~~~qtaldil~d~~~  266 (854)
T KOG0507|consen  213 FD----INYTTEDG-TALHEAALCG-KAEVVRFLLE-IGINTHIKNQHGQTALDIIIDLQE  266 (854)
T ss_pred             CC----cccccccc-hhhhhHhhcC-cchhhhHHHh-hccccccccccchHHHHHHHhcch
Confidence            44    88776665 9999999999 9999999999 999999999999999998876654


No 53 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89  E-value=1.6e-23  Score=215.22  Aligned_cols=232  Identities=21%  Similarity=0.259  Sum_probs=183.0

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHH
Q 048228          104 LLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVF  183 (629)
Q Consensus       104 pLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~  183 (629)
                      .+..||..|+.+-|+.||..|+.+ +..+.+|.|+||-+ +...+.+||++|+++|+++|..                  
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~-~~~n~DglTalhq~-~id~~~e~v~~l~e~ga~Vn~~------------------  102 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASP-NLCNVDGLTALHQA-CIDDNLEMVKFLVENGANVNAQ------------------  102 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCc-cccCCccchhHHHH-HhcccHHHHHHHHHhcCCcccc------------------
Confidence            477788999999999999999874 88899999999998 5569999999999999988865                  


Q ss_pred             hhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccCCCCccccCCCCCchHHHHHhc
Q 048228          184 KWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKSPSLISVTNSHGDTFLHMVVAG  263 (629)
Q Consensus       184 ~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpLh~A~~~  263 (629)
                       |..|+||||.|+.+|++.++++|+++|+++.. .+..|..|+..|......+++..       ..+..|.+  .-|++.
T Consensus       103 -d~e~wtPlhaaascg~~~i~~~li~~gA~~~a-vNsdg~~P~dl~e~ea~~~~l~~-------~~~r~gi~--iea~R~  171 (527)
T KOG0505|consen  103 -DNEGWTPLHAAASCGYLNIVEYLIQHGANLLA-VNSDGNMPYDLAEDEATLDVLET-------EMARQGID--IEAARK  171 (527)
T ss_pred             -ccccCCcchhhcccccHHHHHHHHHhhhhhhh-ccCCCCCccccccCcchhHHHHH-------HHHHhccc--HHHHhh
Confidence             45588999999999999999999999999986 88899988887655444333111       11112222  222221


Q ss_pred             CCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHH
Q 048228          264 FRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLL  343 (629)
Q Consensus       264 ~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A  343 (629)
                      .      ...-.+.=+...+..|     .+.++.+..|.|+||.|+..| ..++.++||+ +|.+++++|.+|+||||.|
T Consensus       172 ~------~e~~ml~D~~q~l~~G-----~~~d~~~~rG~T~lHvAaa~G-y~e~~~lLl~-ag~~~~~~D~dgWtPlHAA  238 (527)
T KOG0505|consen  172 A------EEQTMLDDARQWLNAG-----AELDARHARGATALHVAAANG-YTEVAALLLQ-AGYSVNIKDYDGWTPLHAA  238 (527)
T ss_pred             h------hHHHHHHHHHHHHhcc-----ccccccccccchHHHHHHhhh-HHHHHHHHHH-hccCcccccccCCCcccHH
Confidence            0      0001122234445566     557788888999999999999 9999999999 9999999999999999999


Q ss_pred             HhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHh
Q 048228          344 KQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKG  383 (629)
Q Consensus       344 ~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~  383 (629)
                      +.+|..+    ++++|+++|++.+.....|.||+.+|...
T Consensus       239 A~Wg~~~----~~elL~~~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  239 AHWGQED----ACELLVEHGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             HHhhhHh----HHHHHHHhhcccchhhhcCCCCccchhhh
Confidence            9999988    89999999999999999999999887654


No 54 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88  E-value=3.6e-22  Score=186.73  Aligned_cols=146  Identities=14%  Similarity=0.136  Sum_probs=129.8

Q ss_pred             CCCCccccCCCCCchHHHHHhcCCCCCccccccHH----HHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHH-
Q 048228          242 SPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQI----QLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCN-  316 (629)
Q Consensus       242 ~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~----eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~-  316 (629)
                      ++++++..+.++.++||.|++.          ++.    +++++|++.+     ++++.+|..|+||||+|+..+ +.+ 
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~----------g~~~~l~~~~~~l~~~g-----~~~~~~d~~g~t~Lh~Aa~~g-~~~~   72 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRT----------GNIYELMEVAPFISGDG-----HLLHRYDHHGRQCTHMVAWYD-RANA   72 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHc----------CCHHHHHHHHHHHhhcc-----hhhhccCCCCCcHHHHHHHhC-ccCH
Confidence            5678888999999999999984          666    6777888888     669999999999999999988 655 


Q ss_pred             --HHHHHhcCCCCCcccCC-CCCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCCCCccHHHHHHHhCCCCCCCCC
Q 048228          317 --LVELLMTVPSINLNIQD-GEGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDNVARNAIACHLKGQGIGVSPGS  392 (629)
Q Consensus       317 --iv~~Ll~~~gadvn~~d-~~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~  392 (629)
                        ++++|++ .|+++|.+| ..|.||||+|+..++.+    ++++|+. .|++++.+|..|+||||+|+..+        
T Consensus        73 ~~~i~~Ll~-~Gadin~~d~~~g~TpLh~A~~~g~~~----iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~--------  139 (166)
T PHA02743         73 VMKIELLVN-MGADINARELGTGNTLLHIAASTKNYE----LAEWLCRQLGVNLGAINYQHETAYHIAYKMR--------  139 (166)
T ss_pred             HHHHHHHHH-cCCCCCCCCCCCCCcHHHHHHHhCCHH----HHHHHHhccCCCccCcCCCCCCHHHHHHHcC--------
Confidence              4899999 999999998 58999999999999987    8999995 89999999999999999999887        


Q ss_pred             CCChhhHHHHHHcCCCCccccccCCC
Q 048228          393 SFRVPDAEIFLYTGIENASDAICDAA  418 (629)
Q Consensus       393 ~~~~~~v~~LL~~Gad~~~~d~~g~t  418 (629)
                        +.+++++|+++||+++..+..|..
T Consensus       140 --~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743        140 --DRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             --CHHHHHHHHHcCCCCCCcccCCcc
Confidence              589999999999999988866543


No 55 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.88  E-value=2e-22  Score=207.07  Aligned_cols=234  Identities=21%  Similarity=0.252  Sum_probs=187.6

Q ss_pred             CCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHH
Q 048228           64 DEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAA  143 (629)
Q Consensus        64 ~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA  143 (629)
                      ..-.|..|+..+..+=+..|+.    .|++++..+.+|.|+||.+|...+.+||++|+++|++ ++..|..|+||||-| 
T Consensus        40 ~sa~~l~A~~~~d~~ev~~ll~----~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-Vn~~d~e~wtPlhaa-  113 (527)
T KOG0505|consen   40 DSAVFLEACSRGDLEEVRKLLN----RGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-VNAQDNEGWTPLHAA-  113 (527)
T ss_pred             chHHHHhccccccHHHHHHHhc----cCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCC-ccccccccCCcchhh-
Confidence            3345666667777666666666    7899999999999999999999999999999999999 688999999999998 


Q ss_pred             HHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHh-CCCCcccccCCCC
Q 048228          144 ARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLG-DCENVLAYRDVQG  222 (629)
Q Consensus       144 ~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~-~gad~~~~~d~~g  222 (629)
                      +.+|+..++++|+.+|+++-..+..+                   ..|+-.|...-..+++..-.. .|.++...+....
T Consensus       114 ascg~~~i~~~li~~gA~~~avNsdg-------------------~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e  174 (527)
T KOG0505|consen  114 ASCGYLNIVEYLIQHGANLLAVNSDG-------------------NMPYDLAEDEATLDVLETEMARQGIDIEAARKAEE  174 (527)
T ss_pred             cccccHHHHHHHHHhhhhhhhccCCC-------------------CCccccccCcchhHHHHHHHHHhcccHHHHhhhhH
Confidence            77899999999999999887776553                   345444444444444443333 3444443334444


Q ss_pred             CcHHHHHHhcCCcceecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCc
Q 048228          223 STILHSASGRGQVEVLIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGR  302 (629)
Q Consensus       223 ~TpLh~A~~~g~~~ilL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~  302 (629)
                      .+-|+-+-+      .+ ..|.+.++.+..|-|.||.|+.          +|..+++++|++.|     .+++.+|.+|+
T Consensus       175 ~~ml~D~~q------~l-~~G~~~d~~~~rG~T~lHvAaa----------~Gy~e~~~lLl~ag-----~~~~~~D~dgW  232 (527)
T KOG0505|consen  175 QTMLDDARQ------WL-NAGAELDARHARGATALHVAAA----------NGYTEVAALLLQAG-----YSVNIKDYDGW  232 (527)
T ss_pred             HHHHHHHHH------HH-hccccccccccccchHHHHHHh----------hhHHHHHHHHHHhc-----cCcccccccCC
Confidence            444443332      23 3788888888889999999999          69999999999999     55999999999


Q ss_pred             hHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhC
Q 048228          303 TALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQH  346 (629)
Q Consensus       303 TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~  346 (629)
                      ||||.|+.++ ..+++++|++ +|++++.....|.|||.+|...
T Consensus       233 tPlHAAA~Wg-~~~~~elL~~-~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  233 TPLHAAAHWG-QEDACELLVE-HGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             CcccHHHHhh-hHhHHHHHHH-hhcccchhhhcCCCCccchhhh
Confidence            9999999999 9999999999 9999999999999999998765


No 56 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.86  E-value=1e-21  Score=191.91  Aligned_cols=152  Identities=22%  Similarity=0.303  Sum_probs=125.0

Q ss_pred             hHHhhhccchHHHHHHhcCCHHHHHHHHhCCC-CcccccCCCCCcHHHHHHhcCC---cce----ecccCCCCccccC-C
Q 048228          181 SVFKWEMMNRAVHAVARGGNLDILRQLLGDCE-NVLAYRDVQGSTILHSASGRGQ---VEV----LIAKSPSLISVTN-S  251 (629)
Q Consensus       181 ~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~ga-d~~~~~d~~g~TpLh~A~~~g~---~~i----lL~~~gadin~~d-~  251 (629)
                      +++-|.+|+|+||||+.++|+++|+.||+.|. +++. .++-|.||+++|+...-   .++    -|.. -.|+|++- .
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~-qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~-mgnVNaKAsQ  338 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQ-QNRAGYTPVMLAALAKLKQPADRTVVERLFK-MGDVNAKASQ  338 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccc-cccccccHHHHHHHHhhcchhhHHHHHHHHh-ccCcchhhhh
Confidence            34567789999999999999999999999886 7775 89999999998876432   222    2222 24677764 5


Q ss_pred             CCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCccc
Q 048228          252 HGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNI  331 (629)
Q Consensus       252 ~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~  331 (629)
                      .|+|+|++|+.+          |..++|+.||..|     ||+|++|.+|-|+|+.||++| |.|||++||...++|+..
T Consensus       339 ~gQTALMLAVSH----------Gr~d~vk~LLacg-----AdVNiQDdDGSTALMCA~EHG-hkEivklLLA~p~cd~sL  402 (452)
T KOG0514|consen  339 HGQTALMLAVSH----------GRVDMVKALLACG-----ADVNIQDDDGSTALMCAAEHG-HKEIVKLLLAVPSCDISL  402 (452)
T ss_pred             hcchhhhhhhhc----------CcHHHHHHHHHcc-----CCCccccCCccHHHhhhhhhC-hHHHHHHHhccCccccee
Confidence            789999999985          8899999999988     779999999999999999999 999999999888899999


Q ss_pred             CCCCCCcHHHHHHhCCCCc
Q 048228          332 QDGEGMTPLDLLKQHPRSA  350 (629)
Q Consensus       332 ~d~~G~TpLh~A~~~~~~~  350 (629)
                      .|.+|.|+|.+|...|+.+
T Consensus       403 tD~DgSTAl~IAleagh~e  421 (452)
T KOG0514|consen  403 TDVDGSTALSIALEAGHRE  421 (452)
T ss_pred             ecCCCchhhhhHHhcCchH
Confidence            9999999999999999888


No 57 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.85  E-value=8e-22  Score=192.72  Aligned_cols=162  Identities=23%  Similarity=0.286  Sum_probs=142.0

Q ss_pred             ccCCCCCcHHHHHHhcCCcce---ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhh
Q 048228          217 YRDVQGSTILHSASGRGQVEV---LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDI  293 (629)
Q Consensus       217 ~~d~~g~TpLh~A~~~g~~~i---lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~  293 (629)
                      +.|.+|+|+||||+.++++++   ||...-+++|.+|+.|+||+++|+...-..     ..+.++|+.|+..|      +
T Consensus       263 laDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~-----~~d~~vV~~LF~mg------n  331 (452)
T KOG0514|consen  263 LADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQ-----PADRTVVERLFKMG------D  331 (452)
T ss_pred             hhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcc-----hhhHHHHHHHHhcc------C
Confidence            489999999999999999999   666667799999999999999998742111     46889999999998      4


Q ss_pred             hccCC-cCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCC
Q 048228          294 INVTN-NNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDN  371 (629)
Q Consensus       294 in~~d-~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~  371 (629)
                      ||++- ..|+|+|++|+.+| +.++|+.||. .|||||++|.+|.|+|++|+.+|+.+    |+++||. .++|+...|.
T Consensus       332 VNaKAsQ~gQTALMLAVSHG-r~d~vk~LLa-cgAdVNiQDdDGSTALMCA~EHGhkE----ivklLLA~p~cd~sLtD~  405 (452)
T KOG0514|consen  332 VNAKASQHGQTALMLAVSHG-RVDMVKALLA-CGADVNIQDDDGSTALMCAAEHGHKE----IVKLLLAVPSCDISLTDV  405 (452)
T ss_pred             cchhhhhhcchhhhhhhhcC-cHHHHHHHHH-ccCCCccccCCccHHHhhhhhhChHH----HHHHHhccCcccceeecC
Confidence            56654 47999999999999 9999999999 99999999999999999999999988    9999986 5799999999


Q ss_pred             CCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHc
Q 048228          372 VARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYT  405 (629)
Q Consensus       372 ~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~  405 (629)
                      +|-|+|.+|+..+          +.||.-+|-.+
T Consensus       406 DgSTAl~IAleag----------h~eIa~mlYa~  429 (452)
T KOG0514|consen  406 DGSTALSIALEAG----------HREIAVMLYAH  429 (452)
T ss_pred             CCchhhhhHHhcC----------chHHHHHHHHH
Confidence            9999999999987          57777666543


No 58 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.85  E-value=3.7e-21  Score=179.88  Aligned_cols=147  Identities=20%  Similarity=0.226  Sum_probs=107.3

Q ss_pred             CCCCcccccCCCCCcHHHHHHhcCCcce------ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHH
Q 048228          210 DCENVLAYRDVQGSTILHSASGRGQVEV------LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLV  283 (629)
Q Consensus       210 ~gad~~~~~d~~g~TpLh~A~~~g~~~i------lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll  283 (629)
                      +|++++. .+.++.++||.||+.|+.+.      +|...|++++.+|..|+||||+|+..+.       ....+++++|+
T Consensus         9 ~~~~~~~-~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~-------~~~~~~i~~Ll   80 (166)
T PHA02743          9 NNLGAVE-IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDR-------ANAVMKIELLV   80 (166)
T ss_pred             cchHHhh-hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCc-------cCHHHHHHHHH
Confidence            3445543 45555666666666666522      3445666667777777777777777311       02234578888


Q ss_pred             cCCCCcchhhhccCC-cCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHc
Q 048228          284 SGKIVEVKDIINVTN-NNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISA  362 (629)
Q Consensus       284 ~~g~~d~~a~in~~d-~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~  362 (629)
                      +.|     +++|.++ ..|+||||+|+..+ +.+++++|++..|++++.+|..|.||||+|+..++.+    ++++|+++
T Consensus        81 ~~G-----adin~~d~~~g~TpLh~A~~~g-~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~----iv~~Ll~~  150 (166)
T PHA02743         81 NMG-----ADINARELGTGNTLLHIAASTK-NYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRR----MMEILRAN  150 (166)
T ss_pred             HcC-----CCCCCCCCCCCCcHHHHHHHhC-CHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHH----HHHHHHHc
Confidence            888     6688887 47889999999888 8899999884378999988888999999999888876    88888889


Q ss_pred             CCCCCCCCCCCc
Q 048228          363 GGISNCQDNVAR  374 (629)
Q Consensus       363 Gadvn~~d~~G~  374 (629)
                      |++++.++..|.
T Consensus       151 ga~~~~~~~~~~  162 (166)
T PHA02743        151 GAVCDDPLSIGL  162 (166)
T ss_pred             CCCCCCcccCCc
Confidence            999888887764


No 59 
>PHA02741 hypothetical protein; Provisional
Probab=99.84  E-value=1.5e-20  Score=176.53  Aligned_cols=139  Identities=17%  Similarity=0.243  Sum_probs=121.7

Q ss_pred             CccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCC-CCcchhhhccCCcCCchHHHHHHHcCCc----HHHHH
Q 048228          245 LISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGK-IVEVKDIINVTNNNGRTALHLAVSENIQ----CNLVE  319 (629)
Q Consensus       245 din~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g-~~d~~a~in~~d~~g~TpLh~A~~~~~~----~~iv~  319 (629)
                      .++.+|..|.||||+|+.          .|+.+++++|+... ....+++++.+|..|+||||+|+..+ +    .++++
T Consensus        13 ~~~~~~~~g~t~Lh~Aa~----------~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g-~~~~~~~ii~   81 (169)
T PHA02741         13 MIAEKNSEGENFFHEAAR----------CGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKH-EAQLAAEIID   81 (169)
T ss_pred             HhhccccCCCCHHHHHHH----------cCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcC-ChHHHHHHHH
Confidence            356778899999999999          59999999986421 01122679999999999999999998 7    58999


Q ss_pred             HHhcCCCCCcccCCC-CCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChh
Q 048228          320 LLMTVPSINLNIQDG-EGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVP  397 (629)
Q Consensus       320 ~Ll~~~gadvn~~d~-~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~  397 (629)
                      +|++ .|+++|.++. .|+||||+|+..++.+    ++++|++ .|++++..|..|+|||++|+..+          +.+
T Consensus        82 ~Ll~-~gadin~~~~~~g~TpLh~A~~~~~~~----iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~----------~~~  146 (169)
T PHA02741         82 HLIE-LGADINAQEMLEGDTALHLAAHRRDHD----LAEWLCCQPGIDLHFCNADNKSPFELAIDNE----------DVA  146 (169)
T ss_pred             HHHH-cCCCCCCCCcCCCCCHHHHHHHcCCHH----HHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC----------CHH
Confidence            9999 9999999985 8999999999999988    9999997 59999999999999999999887          589


Q ss_pred             hHHHHHHcCCCC
Q 048228          398 DAEIFLYTGIEN  409 (629)
Q Consensus       398 ~v~~LL~~Gad~  409 (629)
                      ++++|++.++..
T Consensus       147 iv~~L~~~~~~~  158 (169)
T PHA02741        147 MMQILREIVATS  158 (169)
T ss_pred             HHHHHHHHHHHh
Confidence            999999988764


No 60 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.82  E-value=5.4e-20  Score=185.44  Aligned_cols=117  Identities=13%  Similarity=0.160  Sum_probs=60.3

Q ss_pred             CCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhC
Q 048228          131 EGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGD  210 (629)
Q Consensus       131 ~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~  210 (629)
                      +|..|+|+++++|+..|+.+++++|+++|++++....               ..+..|.||||+|+..++.+++++|+++
T Consensus        28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~---------------~sd~~g~TpLh~Aa~~~~~eivklLL~~   92 (300)
T PHA02884         28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP---------------LSENSKTNPLIYAIDCDNDDAAKLLIRY   92 (300)
T ss_pred             cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc---------------ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence            4555555555555555555555555555555553311               0012345555555555555555555555


Q ss_pred             CCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHh
Q 048228          211 CENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVA  262 (629)
Q Consensus       211 gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~  262 (629)
                      |++++...+..|.||||+|+..++.++  +|+..|++++.+|..|.||||+|+.
T Consensus        93 GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~  146 (300)
T PHA02884         93 GADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM  146 (300)
T ss_pred             CCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            555553123345555555555555544  4444555555555555555555554


No 61 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.82  E-value=2.8e-20  Score=172.14  Aligned_cols=138  Identities=15%  Similarity=0.207  Sum_probs=113.0

Q ss_pred             CccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCC-Cc-chhhhccCCcCCchHHHHHHHcCCcH---HHHH
Q 048228          245 LISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKI-VE-VKDIINVTNNNGRTALHLAVSENIQC---NLVE  319 (629)
Q Consensus       245 din~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~-~d-~~a~in~~d~~g~TpLh~A~~~~~~~---~iv~  319 (629)
                      .++..|..|.||||+|+..          |+.  +++++..+. .+ ....++.+|..|+||||+|+..+ +.   ++++
T Consensus         9 ~~~~~d~~g~tpLh~A~~~----------g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~-~~~~~e~v~   75 (154)
T PHA02736          9 FASEPDIEGENILHYLCRN----------GGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPD-KADPQEKLK   75 (154)
T ss_pred             HHHhcCCCCCCHHHHHHHh----------CCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccC-chhHHHHHH
Confidence            4567788999999999994          653  333332220 01 01235567899999999999988 76   5789


Q ss_pred             HHhcCCCCCcccCCC-CCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChh
Q 048228          320 LLMTVPSINLNIQDG-EGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVP  397 (629)
Q Consensus       320 ~Ll~~~gadvn~~d~-~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~  397 (629)
                      +|++ .|+++|.+|. .|.||||+|+..++.+    ++++|+. .|++++.+|..|+||||+|+..+          +.+
T Consensus        76 ~Ll~-~gadin~~~~~~g~T~Lh~A~~~~~~~----i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~----------~~~  140 (154)
T PHA02736         76 LLME-WGADINGKERVFGNTPLHIAVYTQNYE----LATWLCNQPGVNMEILNYAFKTPYYVACERH----------DAK  140 (154)
T ss_pred             HHHH-cCCCccccCCCCCCcHHHHHHHhCCHH----HHHHHHhCCCCCCccccCCCCCHHHHHHHcC----------CHH
Confidence            9999 9999999984 8999999999999987    8999998 59999999999999999999876          589


Q ss_pred             hHHHHHHcCCCCc
Q 048228          398 DAEIFLYTGIENA  410 (629)
Q Consensus       398 ~v~~LL~~Gad~~  410 (629)
                      ++++|+++||+++
T Consensus       141 i~~~Ll~~ga~~~  153 (154)
T PHA02736        141 MMNILRAKGAQCK  153 (154)
T ss_pred             HHHHHHHcCCCCC
Confidence            9999999999875


No 62 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.81  E-value=3.9e-20  Score=171.15  Aligned_cols=102  Identities=23%  Similarity=0.293  Sum_probs=91.0

Q ss_pred             ccccCCCCCchHHHHHhcCCCCCccccccHH---HHHHHHHcCCCCcchhhhccCC-cCCchHHHHHHHcCCcHHHHHHH
Q 048228          246 ISVTNSHGDTFLHMVVAGFRSPGFRRVDHQI---QLMEQLVSGKIVEVKDIINVTN-NNGRTALHLAVSENIQCNLVELL  321 (629)
Q Consensus       246 in~~d~~g~TpLh~A~~~~~~~~~~~~~~~~---eivk~Ll~~g~~d~~a~in~~d-~~g~TpLh~A~~~~~~~~iv~~L  321 (629)
                      ++.+|..|+||||+|+..          ++.   +++++|++.|     +++|.++ ..|+||||+|+..+ +.+++++|
T Consensus        48 ~~~~d~~g~t~Lh~a~~~----------~~~~~~e~v~~Ll~~g-----adin~~~~~~g~T~Lh~A~~~~-~~~i~~~L  111 (154)
T PHA02736         48 VLEYNRHGKQCVHIVSNP----------DKADPQEKLKLLMEWG-----ADINGKERVFGNTPLHIAVYTQ-NYELATWL  111 (154)
T ss_pred             HHHhcCCCCEEEEeeccc----------CchhHHHHHHHHHHcC-----CCccccCCCCCCcHHHHHHHhC-CHHHHHHH
Confidence            345688999999999984          544   6789999999     6799998 49999999999999 99999999


Q ss_pred             hcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCC
Q 048228          322 MTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISN  367 (629)
Q Consensus       322 l~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn  367 (629)
                      ++..|+++|.+|..|+||||+|+..++.+    ++++|+++|++++
T Consensus       112 l~~~g~d~n~~~~~g~tpL~~A~~~~~~~----i~~~Ll~~ga~~~  153 (154)
T PHA02736        112 CNQPGVNMEILNYAFKTPYYVACERHDAK----MMNILRAKGAQCK  153 (154)
T ss_pred             HhCCCCCCccccCCCCCHHHHHHHcCCHH----HHHHHHHcCCCCC
Confidence            97459999999999999999999999987    9999999999876


No 63 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.81  E-value=1.9e-19  Score=158.85  Aligned_cols=138  Identities=20%  Similarity=0.148  Sum_probs=128.1

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHH
Q 048228          104 LLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVF  183 (629)
Q Consensus       104 pLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~  183 (629)
                      .+.+|+..+.+..|+.||+..++.++.+|.+|+||||-| +.+|+.+||+.|+..||+++..+..               
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRA-aYn~h~div~~ll~~gAn~~a~T~~---------------  129 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRA-AYNGHLDIVHELLLSGANKEAKTNE---------------  129 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHH-HhcCchHHHHHHHHccCCccccccc---------------
Confidence            477899999999999999999999999999999999998 8899999999999999999877644               


Q ss_pred             hhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce----ecccCCCCccccCCCCCchHHH
Q 048228          184 KWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV----LIAKSPSLISVTNSHGDTFLHM  259 (629)
Q Consensus       184 ~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i----lL~~~gadin~~d~~g~TpLh~  259 (629)
                          |+||||-||..++.+++-+||++|+|||+ ......||||+||...+...    ||...+.++-..+..+.||+.+
T Consensus       130 ----GWTPLhSAckWnN~~va~~LLqhgaDVnA-~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~i  204 (228)
T KOG0512|consen  130 ----GWTPLHSACKWNNFEVAGRLLQHGADVNA-QTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDI  204 (228)
T ss_pred             ----CccchhhhhcccchhHHHHHHhccCcccc-cccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHH
Confidence                89999999999999999999999999997 88888999999999887666    8888889999999999999999


Q ss_pred             HHh
Q 048228          260 VVA  262 (629)
Q Consensus       260 A~~  262 (629)
                      |-+
T Consensus       205 ARR  207 (228)
T KOG0512|consen  205 ARR  207 (228)
T ss_pred             HHH
Confidence            977


No 64 
>PHA02741 hypothetical protein; Provisional
Probab=99.81  E-value=1.4e-19  Score=170.02  Aligned_cols=129  Identities=22%  Similarity=0.409  Sum_probs=102.6

Q ss_pred             cCCCCCcHHHHHHhcCCcce--ec---c---cCCCCccccCCCCCchHHHHHhcCCCCCccccccH----HHHHHHHHcC
Q 048228          218 RDVQGSTILHSASGRGQVEV--LI---A---KSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQ----IQLMEQLVSG  285 (629)
Q Consensus       218 ~d~~g~TpLh~A~~~g~~~i--lL---~---~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~----~eivk~Ll~~  285 (629)
                      ++..|.||||+|+..|+.++  +|   .   ..|++++.+|..|+||||+|+..          ++    .+++++|++.
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~----------g~~~~~~~ii~~Ll~~   86 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEK----------HEAQLAAEIIDHLIEL   86 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHc----------CChHHHHHHHHHHHHc
Confidence            34444444444444444444  11   0   23577888899999999999984          55    6899999999


Q ss_pred             CCCcchhhhccCCc-CCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCC
Q 048228          286 KIVEVKDIINVTNN-NGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGG  364 (629)
Q Consensus       286 g~~d~~a~in~~d~-~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Ga  364 (629)
                      |     +++|.++. .|+||||+|+..+ +.+++++|++..|++++.+|.+|+||||+|+..++.+    ++++|++.++
T Consensus        87 g-----adin~~~~~~g~TpLh~A~~~~-~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~----iv~~L~~~~~  156 (169)
T PHA02741         87 G-----ADINAQEMLEGDTALHLAAHRR-DHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVA----MMQILREIVA  156 (169)
T ss_pred             C-----CCCCCCCcCCCCCHHHHHHHcC-CHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHH----HHHHHHHHHH
Confidence            9     67999985 9999999999999 9999999997359999999999999999999999877    8888888776


Q ss_pred             CC
Q 048228          365 IS  366 (629)
Q Consensus       365 dv  366 (629)
                      ..
T Consensus       157 ~~  158 (169)
T PHA02741        157 TS  158 (169)
T ss_pred             Hh
Confidence            53


No 65 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80  E-value=8.2e-19  Score=176.90  Aligned_cols=152  Identities=18%  Similarity=0.093  Sum_probs=127.6

Q ss_pred             CcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccccc-
Q 048228           20 ASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRA-   98 (629)
Q Consensus        20 ~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d-   98 (629)
                      .++||.|+..|+.++|++||++|++++.++.        .....|.||||+|+..++.+++++|++    +|++++.++ 
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~--------~sd~~g~TpLh~Aa~~~~~eivklLL~----~GADVN~~~~  101 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADPEAPFP--------LSENSKTNPLIYAIDCDNDDAAKLLIR----YGADVNRYAE  101 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCccccCc--------ccCCCCCCHHHHHHHcCCHHHHHHHHH----cCCCcCcccC
Confidence            4788888888999999999999999986521        012479999999999999999999999    999999864 


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      ..|.||||+|+..|+.+++++|++.|++ ++..|..|.||||+| +..++.+++.++...+  .                
T Consensus       102 ~~g~TpLh~Aa~~~~~eivklLL~~GAd-in~kd~~G~TpL~~A-~~~~~~~~~~~~~~~~--~----------------  161 (300)
T PHA02884        102 EAKITPLYISVLHGCLKCLEILLSYGAD-INIQTNDMVTPIELA-LMICNNFLAFMICDNE--I----------------  161 (300)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HHhCChhHHHHhcCCc--c----------------
Confidence            5799999999999999999999999998 588999999999999 6668888876665332  2                


Q ss_pred             chhHHhhhccchHHHHHHhcCCHHHHHHHHhCCC
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCE  212 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~ga  212 (629)
                            +..+.+|++++   ++.+++++|++++.
T Consensus       162 ------~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        162 ------SNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             ------cccccChhhhh---ccHHHHHHHHHHHH
Confidence                  22345788865   47999999999977


No 66 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.76  E-value=1.9e-18  Score=164.04  Aligned_cols=143  Identities=22%  Similarity=0.259  Sum_probs=123.1

Q ss_pred             ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHH
Q 048228          238 LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNL  317 (629)
Q Consensus       238 lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~i  317 (629)
                      .|.+..-|.|.-|..|.+|||+|++          .|+..+++.|+.+|     +.+|..+....||||+|+.+| +.++
T Consensus        19 wld~tehdln~gddhgfsplhwaak----------egh~aivemll~rg-----arvn~tnmgddtplhlaaahg-hrdi   82 (448)
T KOG0195|consen   19 WLDDTEHDLNVGDDHGFSPLHWAAK----------EGHVAIVEMLLSRG-----ARVNSTNMGDDTPLHLAAAHG-HRDI   82 (448)
T ss_pred             EecCcccccccccccCcchhhhhhh----------cccHHHHHHHHhcc-----cccccccCCCCcchhhhhhcc-cHHH
Confidence            6677777889999999999999999          59999999999999     779999999999999999999 9999


Q ss_pred             HHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChh
Q 048228          318 VELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVP  397 (629)
Q Consensus       318 v~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~  397 (629)
                      |+.||+ ..+|+|+.+..|+|||||||..|...    +.+-|+..||-+++.+++|.|||..|--..          ...
T Consensus        83 vqkll~-~kadvnavnehgntplhyacfwgydq----iaedli~~ga~v~icnk~g~tpldkakp~l----------~~~  147 (448)
T KOG0195|consen   83 VQKLLS-RKADVNAVNEHGNTPLHYACFWGYDQ----IAEDLISCGAAVNICNKKGMTPLDKAKPML----------KNT  147 (448)
T ss_pred             HHHHHH-HhcccchhhccCCCchhhhhhhcHHH----HHHHHHhccceeeecccCCCCchhhhchHH----------HHH
Confidence            999999 99999999999999999999999855    889999999999999999999997765332          233


Q ss_pred             hHHHHHHcCCCCcc
Q 048228          398 DAEIFLYTGIENAS  411 (629)
Q Consensus       398 ~v~~LL~~Gad~~~  411 (629)
                      +.++--++|-.++.
T Consensus       148 l~e~aek~gq~~nr  161 (448)
T KOG0195|consen  148 LLEIAEKHGQSPNR  161 (448)
T ss_pred             HHHHHHHhCCCCCc
Confidence            44555567777763


No 67 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.74  E-value=7.6e-18  Score=148.75  Aligned_cols=143  Identities=22%  Similarity=0.243  Sum_probs=100.2

Q ss_pred             hHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCC
Q 048228          190 RAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSP  267 (629)
Q Consensus       190 t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~  267 (629)
                      ..+.+|+..+.+..|+.||+..++....+|.+|.||||.|+.+|+.+|  .|+..|++++++...|+||||-||..    
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckW----  140 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKW----  140 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcc----
Confidence            457789999999999999998776544477777777777777777776  55556677777777777777777763    


Q ss_pred             CccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCC
Q 048228          268 GFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHP  347 (629)
Q Consensus       268 ~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~  347 (629)
                            .+.+++-+||++|     ||+|+......||||+||........+.+|+...++++-.++..+.||+.+|-+.+
T Consensus       141 ------nN~~va~~LLqhg-----aDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  141 ------NNFEVAGRLLQHG-----ADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             ------cchhHHHHHHhcc-----CcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence                  6677777777777     55777666666777777655435566666666566666666666777777766654


No 68 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.70  E-value=9e-17  Score=173.38  Aligned_cols=226  Identities=19%  Similarity=0.239  Sum_probs=168.3

Q ss_pred             CcccccCCCChHHHHHHHcCCHHHHHHHHhcCC--------CccccCCCCCCCHHHHHHH--HcCCHHHHHHHHHcCCCC
Q 048228           93 NSLIRAGYGGWLLYTAASAGDVRFVKELLQRDP--------LLVFGEGEYGVTDILYAAA--RSKNSEVFRLLLDNAVAP  162 (629)
Q Consensus        93 ~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~--------~~~~~~d~~g~tpL~~AA~--~~g~~~iv~~Ll~~Ga~~  162 (629)
                      .++..+...+.++..|...+.++....|+..+.        ...+.+..-|.|.||.|..  ..++.++++.|++.-.  
T Consensus        93 ~p~~l~~~d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p--  170 (782)
T KOG3676|consen   93 GPNILKRFDRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFP--  170 (782)
T ss_pred             CcchhhhcchhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhH--
Confidence            344444444578899999999988888887662        3356678889999999855  5577899999998532  


Q ss_pred             ccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCcceecccC
Q 048228          163 RCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQVEVLIAKS  242 (629)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~~ilL~~~  242 (629)
                                  .+.........-.|.||||+|+.+.+.++|++|++.||||++ +- .|.  .+.+-..+     ....
T Consensus       171 ------------~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~a-Ra-~G~--FF~~~dqk-----~~rk  229 (782)
T KOG3676|consen  171 ------------KLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHA-RA-CGA--FFCPDDQK-----ASRK  229 (782)
T ss_pred             ------------HHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhh-Hh-hcc--ccCccccc-----cccc
Confidence                        111111222345689999999999999999999999999985 21 110  00000000     0001


Q ss_pred             CCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHh
Q 048228          243 PSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLM  322 (629)
Q Consensus       243 gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll  322 (629)
                      ..+..-.=..|+.||-+||-          .++.|++++|+++|     ||++++|..|+|.||..+..- ..++..+++
T Consensus       230 ~T~Y~G~~YfGEyPLSfAAC----------~nq~eivrlLl~~g-----Ad~~aqDS~GNTVLH~lVi~~-~~~My~~~L  293 (782)
T KOG3676|consen  230 STNYTGYFYFGEYPLSFAAC----------TNQPEIVRLLLAHG-----ADPNAQDSNGNTVLHMLVIHF-VTEMYDLAL  293 (782)
T ss_pred             ccCCcceeeeccCchHHHHH----------cCCHHHHHHHHhcC-----CCCCccccCCChHHHHHHHHH-HHHHHHHHH
Confidence            11111122568999999998          59999999999999     889999999999999999998 999999999


Q ss_pred             cCCCCC--cccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHc
Q 048228          323 TVPSIN--LNIQDGEGMTPLDLLKQHPRSASSEILIKQLISA  362 (629)
Q Consensus       323 ~~~gad--vn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~  362 (629)
                      + +|++  ...+|.+|.|||.+|++-|+.+    +.+.+++.
T Consensus       294 ~-~ga~~l~~v~N~qgLTPLtLAaklGk~e----mf~~ile~  330 (782)
T KOG3676|consen  294 E-LGANALEHVRNNQGLTPLTLAAKLGKKE----MFQHILER  330 (782)
T ss_pred             h-cCCCccccccccCCCChHHHHHHhhhHH----HHHHHHHh
Confidence            9 9999  8899999999999999999988    66666655


No 69 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.70  E-value=4.8e-18  Score=161.26  Aligned_cols=132  Identities=29%  Similarity=0.348  Sum_probs=101.3

Q ss_pred             ccCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhh
Q 048228          217 YRDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDII  294 (629)
Q Consensus       217 ~~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~i  294 (629)
                      +-|..|.+|||+||+.|+..+  .|+..|+.+|..+....||||+|+.+          |+.++|+.|++..     +|+
T Consensus        29 ~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaah----------ghrdivqkll~~k-----adv   93 (448)
T KOG0195|consen   29 VGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAH----------GHRDIVQKLLSRK-----ADV   93 (448)
T ss_pred             cccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhc----------ccHHHHHHHHHHh-----ccc
Confidence            356666666666666666655  55556666667777778889998885          8999999999988     779


Q ss_pred             ccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCC
Q 048228          295 NVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQ  369 (629)
Q Consensus       295 n~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~  369 (629)
                      |+.+..|+|||||||..| ...+.+-|+. .|+-+++.+++|.|||..|.-.    ..+.+.++--++|-.+|..
T Consensus        94 navnehgntplhyacfwg-ydqiaedli~-~ga~v~icnk~g~tpldkakp~----l~~~l~e~aek~gq~~nri  162 (448)
T KOG0195|consen   94 NAVNEHGNTPLHYACFWG-YDQIAEDLIS-CGAAVNICNKKGMTPLDKAKPM----LKNTLLEIAEKHGQSPNRI  162 (448)
T ss_pred             chhhccCCCchhhhhhhc-HHHHHHHHHh-ccceeeecccCCCCchhhhchH----HHHHHHHHHHHhCCCCCcc
Confidence            999999999999999999 9999999999 9999999999999999887433    1122444444577777643


No 70 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67  E-value=2.6e-16  Score=131.07  Aligned_cols=89  Identities=19%  Similarity=0.336  Sum_probs=81.0

Q ss_pred             HHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhC
Q 048228          305 LHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       305 Lh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~  384 (629)
                      ||+||+.+ +.+++++|++ .+.+++.    |.||||+|+..|+.+    ++++|+++|++++.+|..|+||||+|+..+
T Consensus         1 L~~A~~~~-~~~~~~~ll~-~~~~~~~----~~~~l~~A~~~~~~~----~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNG-NLEILKFLLE-KGADINL----GNTALHYAAENGNLE----IVKLLLENGADINSQDKNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTT-THHHHHHHHH-TTSTTTS----SSBHHHHHHHTTTHH----HHHHHHHTTTCTT-BSTTSSBHHHHHHHTT
T ss_pred             CHHHHHcC-CHHHHHHHHH-CcCCCCC----CCCHHHHHHHcCCHH----HHHHHHHhcccccccCCCCCCHHHHHHHcC
Confidence            79999999 9999999999 9999887    899999999999988    999999999999999999999999999987


Q ss_pred             CCCCCCCCCCChhhHHHHHHcCCCCcccc
Q 048228          385 GIGVSPGSSFRVPDAEIFLYTGIENASDA  413 (629)
Q Consensus       385 ~~~~~~~~~~~~~~v~~LL~~Gad~~~~d  413 (629)
                                +.+++++|+++|++++.+|
T Consensus        71 ----------~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   71 ----------NLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             ----------HHHHHHHHHHTTT-TTSS-
T ss_pred             ----------CHHHHHHHHHcCCCCCCcC
Confidence                      6999999999999998765


No 71 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.67  E-value=1.5e-16  Score=171.62  Aligned_cols=185  Identities=23%  Similarity=0.262  Sum_probs=154.3

Q ss_pred             chHHHHHHhcCCHHHHHHHHhCC---------CCcccccCCCCCcHHHHHHhcCCc---ce---ecccCCCCcccc----
Q 048228          189 NRAVHAVARGGNLDILRQLLGDC---------ENVLAYRDVQGSTILHSASGRGQV---EV---LIAKSPSLISVT----  249 (629)
Q Consensus       189 ~t~Lh~A~~~g~~~iv~~Ll~~g---------ad~~~~~d~~g~TpLh~A~~~g~~---~i---lL~~~gadin~~----  249 (629)
                      +.++..|...+.++.+..|+..+         .+++. +...|.|.||.|..+.+.   ++   ||.-.+--+|..    
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~-RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e  180 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNE-RGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE  180 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhhhhhhhhcccc-ccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH
Confidence            37888899999999888888776         46664 788999999999986443   23   444444434432    


Q ss_pred             CCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccC---------C--------------cCCchHHH
Q 048228          250 NSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVT---------N--------------NNGRTALH  306 (629)
Q Consensus       250 d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~---------d--------------~~g~TpLh  306 (629)
                      ...|+||||+|+.          +.+.++|++|++.|     ||++++         |              ..|+.||-
T Consensus       181 eY~GqSaLHiAIv----------~~~~~~V~lLl~~g-----ADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLS  245 (782)
T KOG3676|consen  181 EYYGQSALHIAIV----------NRDAELVRLLLAAG-----ADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLS  245 (782)
T ss_pred             hhcCcchHHHHHH----------hccHHHHHHHHHcC-----CchhhHhhccccCcccccccccccCCcceeeeccCchH
Confidence            2579999999999          58999999999999     445543         1              14779999


Q ss_pred             HHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCC--CCCCCCCCccHHHHHHHhC
Q 048228          307 LAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGI--SNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       307 ~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gad--vn~~d~~G~TpL~~A~~~~  384 (629)
                      +||..+ +.+|+++|++ +|||+|++|..|+|.||..+..-..+    +.++++++|++  ...+|+.|.|||.+|++.+
T Consensus       246 fAAC~n-q~eivrlLl~-~gAd~~aqDS~GNTVLH~lVi~~~~~----My~~~L~~ga~~l~~v~N~qgLTPLtLAaklG  319 (782)
T KOG3676|consen  246 FAACTN-QPEIVRLLLA-HGADPNAQDSNGNTVLHMLVIHFVTE----MYDLALELGANALEHVRNNQGLTPLTLAAKLG  319 (782)
T ss_pred             HHHHcC-CHHHHHHHHh-cCCCCCccccCCChHHHHHHHHHHHH----HHHHHHhcCCCccccccccCCCChHHHHHHhh
Confidence            999999 9999999999 99999999999999999999984444    89999999999  8999999999999999998


Q ss_pred             CCCCCCCCCCChhhHHHHHHc
Q 048228          385 GIGVSPGSSFRVPDAEIFLYT  405 (629)
Q Consensus       385 ~~~~~~~~~~~~~~v~~LL~~  405 (629)
                                +.++.+.+++.
T Consensus       320 ----------k~emf~~ile~  330 (782)
T KOG3676|consen  320 ----------KKEMFQHILER  330 (782)
T ss_pred             ----------hHHHHHHHHHh
Confidence                      69999999998


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66  E-value=2.5e-16  Score=131.14  Aligned_cols=89  Identities=27%  Similarity=0.454  Sum_probs=80.3

Q ss_pred             HHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCC
Q 048228          257 LHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEG  336 (629)
Q Consensus       257 Lh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G  336 (629)
                      ||+|+.          .++.+++++|++.+     .+++.    |+||||+|+..| +.+++++|++ .|++++.+|..|
T Consensus         1 L~~A~~----------~~~~~~~~~ll~~~-----~~~~~----~~~~l~~A~~~~-~~~~~~~Ll~-~g~~~~~~~~~g   59 (89)
T PF12796_consen    1 LHIAAQ----------NGNLEILKFLLEKG-----ADINL----GNTALHYAAENG-NLEIVKLLLE-NGADINSQDKNG   59 (89)
T ss_dssp             HHHHHH----------TTTHHHHHHHHHTT-----STTTS----SSBHHHHHHHTT-THHHHHHHHH-TTTCTT-BSTTS
T ss_pred             CHHHHH----------cCCHHHHHHHHHCc-----CCCCC----CCCHHHHHHHcC-CHHHHHHHHH-hcccccccCCCC
Confidence            799999          59999999999988     33555    999999999999 9999999999 999999999999


Q ss_pred             CcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCC
Q 048228          337 MTPLDLLKQHPRSASSEILIKQLISAGGISNCQD  370 (629)
Q Consensus       337 ~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d  370 (629)
                      +||||+|+..++.+    ++++|+++|+++|.+|
T Consensus        60 ~t~L~~A~~~~~~~----~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   60 NTALHYAAENGNLE----IVKLLLEHGADVNIRN   89 (89)
T ss_dssp             SBHHHHHHHTTHHH----HHHHHHHTTT-TTSS-
T ss_pred             CCHHHHHHHcCCHH----HHHHHHHcCCCCCCcC
Confidence            99999999999988    9999999999999876


No 73 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.65  E-value=1.7e-15  Score=133.67  Aligned_cols=125  Identities=26%  Similarity=0.460  Sum_probs=115.1

Q ss_pred             ccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCC
Q 048228          248 VTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSI  327 (629)
Q Consensus       248 ~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~ga  327 (629)
                      ..|..|.||||+|+.          .++.+++++|++.+     ++++..+..|.||||+|+..+ +.+++++|++ .|+
T Consensus         2 ~~~~~g~t~l~~a~~----------~~~~~~i~~li~~~-----~~~~~~~~~g~~~l~~a~~~~-~~~~~~~ll~-~~~   64 (126)
T cd00204           2 ARDEDGRTPLHLAAS----------NGHLEVVKLLLENG-----ADVNAKDNDGRTPLHLAAKNG-HLEIVKLLLE-KGA   64 (126)
T ss_pred             CcCcCCCCHHHHHHH----------cCcHHHHHHHHHcC-----CCCCccCCCCCcHHHHHHHcC-CHHHHHHHHH-cCC
Confidence            456789999999999          58999999999999     446889999999999999999 9999999999 999


Q ss_pred             CcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHH
Q 048228          328 NLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFL  403 (629)
Q Consensus       328 dvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL  403 (629)
                      +++..+..|.||+|+|+..++.+    ++++|++.|.+++..+..|.|||++|+...          +.+++++|+
T Consensus        65 ~~~~~~~~~~~~l~~a~~~~~~~----~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~Ll  126 (126)
T cd00204          65 DVNARDKDGNTPLHLAARNGNLD----VVKLLLKHGADVNARDKDGRTPLHLAAKNG----------HLEVVKLLL  126 (126)
T ss_pred             CccccCCCCCCHHHHHHHcCcHH----HHHHHHHcCCCCcccCCCCCCHHHHHHhcC----------CHHHHHHhC
Confidence            99999999999999999999977    999999999999999999999999999875          588888874


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.57  E-value=4.8e-14  Score=124.35  Aligned_cols=121  Identities=33%  Similarity=0.329  Sum_probs=109.5

Q ss_pred             CCCcHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccc
Q 048228           18 WYASPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIR   97 (629)
Q Consensus        18 ~g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~   97 (629)
                      .|.||||+|+..|+.+++++|++.|++.+..            ...|.+|||.|+..+..+++++|++    .|.+++..
T Consensus         6 ~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~------------~~~g~~~l~~a~~~~~~~~~~~ll~----~~~~~~~~   69 (126)
T cd00204           6 DGRTPLHLAASNGHLEVVKLLLENGADVNAK------------DNDGRTPLHLAAKNGHLEIVKLLLE----KGADVNAR   69 (126)
T ss_pred             CCCCHHHHHHHcCcHHHHHHHHHcCCCCCcc------------CCCCCcHHHHHHHcCCHHHHHHHHH----cCCCcccc
Confidence            4679999999999999999999999987543            3679999999999999999999999    88888999


Q ss_pred             cCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHH
Q 048228           98 AGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLL  156 (629)
Q Consensus        98 d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll  156 (629)
                      +..|.||+|+|+..++.+++++|++++.. .+..+..|.||+++| +..++.+++++|+
T Consensus        70 ~~~~~~~l~~a~~~~~~~~~~~L~~~~~~-~~~~~~~~~~~l~~~-~~~~~~~~~~~Ll  126 (126)
T cd00204          70 DKDGNTPLHLAARNGNLDVVKLLLKHGAD-VNARDKDGRTPLHLA-AKNGHLEVVKLLL  126 (126)
T ss_pred             CCCCCCHHHHHHHcCcHHHHHHHHHcCCC-CcccCCCCCCHHHHH-HhcCCHHHHHHhC
Confidence            99999999999999999999999999866 567889999999998 7779999999885


No 75 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.51  E-value=3.2e-14  Score=112.74  Aligned_cols=101  Identities=18%  Similarity=0.200  Sum_probs=85.0

Q ss_pred             HHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHh
Q 048228          304 ALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKG  383 (629)
Q Consensus       304 pLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~  383 (629)
                      -+.|++.+| .++-|+-.+. .|.|||..- .|+||||+|+..|+.+    ++++|+..||+++.+|+.|-|||..|+-.
T Consensus         5 ~~~W~vkNG-~~DeVk~~v~-~g~nVn~~~-ggR~plhyAAD~GQl~----ilefli~iGA~i~~kDKygITPLLsAvwE   77 (117)
T KOG4214|consen    5 SVAWNVKNG-EIDEVKQSVN-EGLNVNEIY-GGRTPLHYAADYGQLS----ILEFLISIGANIQDKDKYGITPLLSAVWE   77 (117)
T ss_pred             hHhhhhccC-cHHHHHHHHH-ccccHHHHh-CCcccchHhhhcchHH----HHHHHHHhccccCCccccCCcHHHHHHHH
Confidence            356788888 8888888887 788888765 7889999999999888    88888999999999999999999888877


Q ss_pred             CCCCCCCCCCCChhhHHHHHHcCCCCccccccCCChhh
Q 048228          384 QGIGVSPGSSFRVPDAEIFLYTGIENASDAICDAASVE  421 (629)
Q Consensus       384 ~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d~~g~t~~~  421 (629)
                      +          +.++|++||+.|||-..+...|.+.++
T Consensus        78 G----------H~~cVklLL~~GAdrt~~~PdG~~~~e  105 (117)
T KOG4214|consen   78 G----------HRDCVKLLLQNGADRTIHAPDGTALIE  105 (117)
T ss_pred             h----------hHHHHHHHHHcCcccceeCCCchhHHh
Confidence            6          688999999999998888777777666


No 76 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.49  E-value=2.2e-13  Score=107.97  Aligned_cols=100  Identities=20%  Similarity=0.136  Sum_probs=88.8

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCC
Q 048228           21 SPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGY  100 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~  100 (629)
                      --+.|++++|.+|-|+.....|-|+|..             ..|.+|||+|+-+|...++.+|+.    .|++++.+|++
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~-------------~ggR~plhyAAD~GQl~ilefli~----iGA~i~~kDKy   66 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEI-------------YGGRTPLHYAADYGQLSILEFLIS----IGANIQDKDKY   66 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHH-------------hCCcccchHhhhcchHHHHHHHHH----hccccCCcccc
Confidence            4578999999999999999999888743             579999999999999999999999    99999999999


Q ss_pred             CChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCH
Q 048228          101 GGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTD  138 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tp  138 (629)
                      |-|||..|+..||.++|++||..|++- .....+|.+.
T Consensus        67 gITPLLsAvwEGH~~cVklLL~~GAdr-t~~~PdG~~~  103 (117)
T KOG4214|consen   67 GITPLLSAVWEGHRDCVKLLLQNGADR-TIHAPDGTAL  103 (117)
T ss_pred             CCcHHHHHHHHhhHHHHHHHHHcCccc-ceeCCCchhH
Confidence            999999999999999999999999884 5566677663


No 77 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.48  E-value=4.7e-13  Score=131.09  Aligned_cols=132  Identities=21%  Similarity=0.346  Sum_probs=118.6

Q ss_pred             CCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCc-----HHHH
Q 048228          244 SLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQ-----CNLV  318 (629)
Q Consensus       244 adin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~-----~~iv  318 (629)
                      ......+..+.+++|.++.          .+..+++++|+..+     ++++.++..|.||||+|+..+ +     .+++
T Consensus        64 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~-----~~~~~~~~~g~t~l~~a~~~~-~~~~~~~~~~  127 (235)
T COG0666          64 RHLAARDLDGRLPLHSAAS----------KGDDKIVKLLLASG-----ADVNAKDADGDTPLHLAALNG-NPPEGNIEVA  127 (235)
T ss_pred             cccccCCccccCHHHHHHH----------cCcHHHHHHHHHcC-----CCcccccCCCCcHHHHHHhcC-CcccchHHHH
Confidence            3345566778999999999          58899999999999     568999999999999999999 8     9999


Q ss_pred             HHHhcCCCC---CcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCC
Q 048228          319 ELLMTVPSI---NLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQGIGVSPGSSFR  395 (629)
Q Consensus       319 ~~Ll~~~ga---dvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~  395 (629)
                      ++||+ .|+   +.+.+|..|.||||+|+..|+.+    ++++|++.|++++..+..|.|+++.|....          +
T Consensus       128 ~~ll~-~g~~~~~~~~~~~~g~tpl~~A~~~~~~~----~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~----------~  192 (235)
T COG0666         128 KLLLE-AGADLDVNNLRDEDGNTPLHWAALNGDAD----IVELLLEAGADPNSRNSYGVTALDPAAKNG----------R  192 (235)
T ss_pred             HHHHH-cCCCCCCccccCCCCCchhHHHHHcCchH----HHHHHHhcCCCCcccccCCCcchhhhcccc----------h
Confidence            99999 999   66666999999999999999987    999999999999999999999999999887          6


Q ss_pred             hhhHHHHHHcC
Q 048228          396 VPDAEIFLYTG  406 (629)
Q Consensus       396 ~~~v~~LL~~G  406 (629)
                      .++++.|++.|
T Consensus       193 ~~~~~~l~~~~  203 (235)
T COG0666         193 IELVKLLLDKG  203 (235)
T ss_pred             HHHHHHHHhcC
Confidence            89999999987


No 78 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.44  E-value=5.4e-13  Score=130.63  Aligned_cols=130  Identities=29%  Similarity=0.496  Sum_probs=108.2

Q ss_pred             cCCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchh---
Q 048228          218 RDVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKD---  292 (629)
Q Consensus       218 ~d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a---  292 (629)
                      .+..+.+++|.++..+..++  ++...|++++.+|..|.||||+|+..++.+     .++.+++++|++.|     +   
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~-----~~~~~~~~~ll~~g-----~~~~  138 (235)
T COG0666          69 RDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP-----EGNIEVAKLLLEAG-----ADLD  138 (235)
T ss_pred             CCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcc-----cchHHHHHHHHHcC-----CCCC
Confidence            56667788888877777777  677777788888888888888888741110     23399999999999     4   


Q ss_pred             hhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcC
Q 048228          293 IINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAG  363 (629)
Q Consensus       293 ~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~G  363 (629)
                      +.+.+|..|+||||+|+..+ +.+++++|++ .|++++.++..|.|+|+.|+..++.+    +++.|++.+
T Consensus       139 ~~~~~~~~g~tpl~~A~~~~-~~~~~~~ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~----~~~~l~~~~  203 (235)
T COG0666         139 VNNLRDEDGNTPLHWAALNG-DADIVELLLE-AGADPNSRNSYGVTALDPAAKNGRIE----LVKLLLDKG  203 (235)
T ss_pred             CccccCCCCCchhHHHHHcC-chHHHHHHHh-cCCCCcccccCCCcchhhhcccchHH----HHHHHHhcC
Confidence            46777999999999999999 9999999999 99999999999999999999999988    788888765


No 79 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.37  E-value=3.6e-12  Score=144.40  Aligned_cols=106  Identities=14%  Similarity=0.164  Sum_probs=97.6

Q ss_pred             hHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHH
Q 048228          303 TALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLK  382 (629)
Q Consensus       303 TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~  382 (629)
                      +.|+.|+..| +.+++++|++ .|+|+|.+|..|+||||+|+..|+.+    ++++|+++|+|+|.+|..|+||||+|+.
T Consensus        84 ~~L~~aa~~G-~~~~vk~LL~-~Gadin~~d~~G~TpLh~Aa~~g~~e----iv~~LL~~Gadvn~~d~~G~TpLh~A~~  157 (664)
T PTZ00322         84 VELCQLAASG-DAVGARILLT-GGADPNCRDYDGRTPLHIACANGHVQ----VVRVLLEFGADPTLLDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHHcC-CHHHHHHHHH-CCCCCCCcCCCCCcHHHHHHHCCCHH----HHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            4588999999 9999999999 99999999999999999999999988    9999999999999999999999999998


Q ss_pred             hCCCCCCCCCCCChhhHHHHHHc-------CCCCccccccCCChhhhhh
Q 048228          383 GQGIGVSPGSSFRVPDAEIFLYT-------GIENASDAICDAASVEYSS  424 (629)
Q Consensus       383 ~~~~~~~~~~~~~~~~v~~LL~~-------Gad~~~~d~~g~t~~~~a~  424 (629)
                      .+          +.+++++|+++       |++++..+..|++++....
T Consensus       158 ~g----------~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        158 NG----------FREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             CC----------cHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            87          68999999999       9999999988887766554


No 80 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.34  E-value=5.6e-13  Score=100.09  Aligned_cols=49  Identities=31%  Similarity=0.482  Sum_probs=21.6

Q ss_pred             hhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHH
Q 048228          293 IINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLL  343 (629)
Q Consensus       293 ~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A  343 (629)
                      ++|.+|..|+||||+||..| +.++|++|++ .|+|++.+|..|+||||+|
T Consensus         8 ~~n~~d~~G~T~LH~A~~~g-~~~~v~~Ll~-~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    8 DVNAQDKYGNTPLHWAARYG-HSEVVRLLLQ-NGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -TT---TTS--HHHHHHHHT--HHHHHHHHH-CT--TT---TTS--HHHH-
T ss_pred             CCcCcCCCCCcHHHHHHHcC-cHHHHHHHHH-CcCCCCCCcCCCCCHHHhC
Confidence            36666666666666666666 6666666665 6666666666666666654


No 81 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.34  E-value=1e-12  Score=98.71  Aligned_cols=55  Identities=24%  Similarity=0.372  Sum_probs=33.1

Q ss_pred             HhcCCC-CCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHH
Q 048228          321 LMTVPS-INLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACH  380 (629)
Q Consensus       321 Ll~~~g-advn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A  380 (629)
                      ||+ +| +++|.+|..|.||||+|+..|+.+    ++++|++.|+|++.+|..|+||||+|
T Consensus         1 LL~-~~~~~~n~~d~~G~T~LH~A~~~g~~~----~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLE-HGPADVNAQDKYGNTPLHWAARYGHSE----VVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ------T--TT---TTS--HHHHHHHHT-HH----HHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCc-cCcCCCcCcCCCCCcHHHHHHHcCcHH----HHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            577 77 999999999999999999999988    99999999999999999999999987


No 82 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.33  E-value=2.8e-12  Score=145.33  Aligned_cols=106  Identities=20%  Similarity=0.264  Sum_probs=97.8

Q ss_pred             chHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC
Q 048228          255 TFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG  334 (629)
Q Consensus       255 TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~  334 (629)
                      +.|+.|+.          .|+.+++++|++.|     +++|.+|..|+||||+||..| +.+++++|++ .|+|+|.+|.
T Consensus        84 ~~L~~aa~----------~G~~~~vk~LL~~G-----adin~~d~~G~TpLh~Aa~~g-~~eiv~~LL~-~Gadvn~~d~  146 (664)
T PTZ00322         84 VELCQLAA----------SGDAVGARILLTGG-----ADPNCRDYDGRTPLHIACANG-HVQVVRVLLE-FGADPTLLDK  146 (664)
T ss_pred             HHHHHHHH----------cCCHHHHHHHHHCC-----CCCCCcCCCCCcHHHHHHHCC-CHHHHHHHHH-CCCCCCCCCC
Confidence            45888888          59999999999999     679999999999999999999 9999999999 9999999999


Q ss_pred             CCCcHHHHHHhCCCCchHHHHHHHHHHc-------CCCCCCCCCCCccHHHHHH
Q 048228          335 EGMTPLDLLKQHPRSASSEILIKQLISA-------GGISNCQDNVARNAIACHL  381 (629)
Q Consensus       335 ~G~TpLh~A~~~~~~~~~~~lv~~Ll~~-------Gadvn~~d~~G~TpL~~A~  381 (629)
                      .|.||||+|+..++.+    ++++|+++       |++++..+..|.+|+..+.
T Consensus       147 ~G~TpLh~A~~~g~~~----iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        147 DGKTPLELAEENGFRE----VVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             CCCCHHHHHHHCCcHH----HHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            9999999999999988    89999998       9999999998988876554


No 83 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29  E-value=4.5e-12  Score=129.85  Aligned_cols=112  Identities=21%  Similarity=0.288  Sum_probs=95.2

Q ss_pred             ccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchH
Q 048228          273 DHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASS  352 (629)
Q Consensus       273 ~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~  352 (629)
                      .|.+++|+..+..-     .|+...+.+|-||||-|+..| |.+||++||+ .|+|||+.|.+|+||||+|+..++..  
T Consensus       560 eGEldlVq~~i~ev-----~DpSqpNdEGITaLHNAiCag-hyeIVkFLi~-~ganVNa~DSdGWTPLHCAASCNnv~--  630 (752)
T KOG0515|consen  560 EGELDLVQRIIYEV-----TDPSQPNDEGITALHNAICAG-HYEIVKFLIE-FGANVNAADSDGWTPLHCAASCNNVP--  630 (752)
T ss_pred             cchHHHHHHHHHhh-----cCCCCCCccchhHHhhhhhcc-hhHHHHHHHh-cCCcccCccCCCCchhhhhhhcCchH--
Confidence            69999999999876     568899999999999999999 9999999999 99999999999999999999999988  


Q ss_pred             HHHHHHHHHcCCCCCCCC-CCCccHHHHHHHhCCCCCCCCCCCChhhHHHHH
Q 048228          353 EILIKQLISAGGISNCQD-NVARNAIACHLKGQGIGVSPGSSFRVPDAEIFL  403 (629)
Q Consensus       353 ~~lv~~Ll~~Gadvn~~d-~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL  403 (629)
                        +++.|++.||-|-+.. .++.||..-+-.+.     .|   ...|.+||-
T Consensus       631 --~ckqLVe~GaavfAsTlSDmeTa~eKCee~e-----eG---Y~~CsqyL~  672 (752)
T KOG0515|consen  631 --MCKQLVESGAAVFASTLSDMETAAEKCEEME-----EG---YDQCSQYLY  672 (752)
T ss_pred             --HHHHHHhccceEEeeecccccchhhhcchhh-----hh---HHHHHHHHH
Confidence              9999999998876544 57888864332221     12   467888886


No 84 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.28  E-value=2.3e-11  Score=116.19  Aligned_cols=124  Identities=21%  Similarity=0.121  Sum_probs=106.7

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHH
Q 048228           63 DDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYA  142 (629)
Q Consensus        63 ~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~A  142 (629)
                      +-..||..++-.+..+...-|+.    .-.++|.+|..|+++|..|+..|+.++|+.||+.|++++...+..++||||+|
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs----~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFA   86 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLS----TVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFA   86 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHH----HhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHH
Confidence            34568888888877777666665    34569999999999999999999999999999999998888899999999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhC
Q 048228          143 AARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGD  210 (629)
Q Consensus       143 A~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~  210 (629)
                       +.+|+.++.++|++.|+.+...++-                   |+|+-..|+.-|+.++|..+-++
T Consensus        87 -ALSGn~dvcrllldaGa~~~~vNsv-------------------grTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   87 -ALSGNQDVCRLLLDAGARMYLVNSV-------------------GRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             -HHcCCchHHHHHHhccCccccccch-------------------hhhHHHHHHHhcchHHHHHHhcc
Confidence             6779999999999999988766543                   78999999999999999876443


No 85 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.27  E-value=5e-12  Score=94.30  Aligned_cols=54  Identities=33%  Similarity=0.561  Sum_probs=45.5

Q ss_pred             CchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHH
Q 048228          301 GRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLI  360 (629)
Q Consensus       301 g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll  360 (629)
                      |+||||+||..| +.+++++|++ .|+|+|.+|.+|+||||+|+..|+.+    ++++||
T Consensus         1 g~t~lh~A~~~g-~~~~~~~Ll~-~~~din~~d~~g~t~lh~A~~~g~~~----~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSG-NLEIVKLLLE-HGADINAQDEDGRTPLHYAAKNGNID----IVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT--HHHHHHHHH-TTSGTT-B-TTS--HHHHHHHTT-HH----HHHHHH
T ss_pred             CChHHHHHHHhC-CHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHccCHH----HHHHHC
Confidence            789999999999 9999999999 89999999999999999999999988    888875


No 86 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.24  E-value=3.6e-11  Score=114.91  Aligned_cols=111  Identities=21%  Similarity=0.203  Sum_probs=100.0

Q ss_pred             CCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccC
Q 048228          253 GDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQ  332 (629)
Q Consensus       253 g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~  332 (629)
                      -..||.-++.          .+..+-...|++.-     -.+|.+|..|.|+|..|+..| +.++|++||+ .|+|||..
T Consensus        12 ~~~~Lle~i~----------Kndt~~a~~LLs~v-----r~vn~~D~sGMs~LahAaykG-nl~~v~lll~-~gaDvN~~   74 (396)
T KOG1710|consen   12 PKSPLLEAID----------KNDTEAALALLSTV-----RQVNQRDPSGMSVLAHAAYKG-NLTLVELLLE-LGADVNDK   74 (396)
T ss_pred             hhhHHHHHHc----------cCcHHHHHHHHHHh-----hhhhccCCCcccHHHHHHhcC-cHHHHHHHHH-hCCCcCcc
Confidence            3568888887          58888888898865     459999999999999999999 9999999999 99999976


Q ss_pred             -CCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHhC
Q 048228          333 -DGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLKGQ  384 (629)
Q Consensus       333 -d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~~~  384 (629)
                       +..+.||||+|+..|+.+    +..+|++.|+.....+.-|+|+-.+|+.-+
T Consensus        75 qhg~~YTpLmFAALSGn~d----vcrllldaGa~~~~vNsvgrTAaqmAAFVG  123 (396)
T KOG1710|consen   75 QHGTLYTPLMFAALSGNQD----VCRLLLDAGARMYLVNSVGRTAAQMAAFVG  123 (396)
T ss_pred             cccccccHHHHHHHcCCch----HHHHHHhccCccccccchhhhHHHHHHHhc
Confidence             667999999999999999    999999999999999999999998887654


No 87 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18  E-value=6e-11  Score=121.75  Aligned_cols=119  Identities=17%  Similarity=0.055  Sum_probs=90.7

Q ss_pred             HHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCC
Q 048228           23 IDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGG  102 (629)
Q Consensus        23 Lh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~  102 (629)
                      |.-|+..|.+|+|+..+..-.|+..            .+..|-|+||-|+..|+.+|++||++    .|+|+|..|.+|+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSq------------pNdEGITaLHNAiCaghyeIVkFLi~----~ganVNa~DSdGW  617 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQ------------PNDEGITALHNAICAGHYEIVKFLIE----FGANVNAADSDGW  617 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCC------------CCccchhHHhhhhhcchhHHHHHHHh----cCCcccCccCCCC
Confidence            4557788889999888887666543            23568889999988899999999988    8889999999999


Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHH-HHHcCCHHHHHHHHH
Q 048228          103 WLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYA-AARSKNSEVFRLLLD  157 (629)
Q Consensus       103 tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~A-A~~~g~~~iv~~Ll~  157 (629)
                      ||||+|+.++++.+++.|++.|+.+....-.++.|+.--. -.+.|..+|.+||..
T Consensus       618 TPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  618 TPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             chhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            9999999999999999999988875444445566653321 123477788888764


No 88 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.15  E-value=8.4e-11  Score=87.66  Aligned_cols=54  Identities=33%  Similarity=0.448  Sum_probs=28.5

Q ss_pred             CChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHH
Q 048228          101 GGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLL  156 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll  156 (629)
                      |+||||+||..|+.+++++|++++.+ ++..|.+|.||||+| +..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d-in~~d~~g~t~lh~A-~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD-INAQDEDGRTPLHYA-AKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG-TT-B-TTS--HHHHH-HHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHH-HHccCHHHHHHHC
Confidence            45666666666666666666666555 345566666666665 4556666666654


No 89 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.77  E-value=7.7e-09  Score=66.35  Aligned_cols=29  Identities=34%  Similarity=0.480  Sum_probs=27.3

Q ss_pred             CCCcHHHHHHHCCCHHHHHHHHHhCCCch
Q 048228           18 WYASPIDFAAANGHYELVKELLHLDTNLL   46 (629)
Q Consensus        18 ~g~TpLh~Aa~~G~~~~v~~LL~~gad~~   46 (629)
                      +|+||||+||..|+.|+|++||++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            47799999999999999999999999986


No 90 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.69  E-value=7e-09  Score=111.97  Aligned_cols=83  Identities=29%  Similarity=0.370  Sum_probs=79.2

Q ss_pred             hccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCC-CCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCC
Q 048228          294 INVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGE-GMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNV  372 (629)
Q Consensus       294 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~-G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~  372 (629)
                      +|.+|..|+|+||+|+..+ ..+++++||+ +|+|++.+|.+ |.||||-|+.+|+.+    ++-+||.+|+.+.++|++
T Consensus        45 anikD~~GR~alH~~~S~~-k~~~l~wLlq-hGidv~vqD~ESG~taLHRaiyyG~id----ca~lLL~~g~SL~i~Dke  118 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSEN-KNSFLRWLLQ-HGIDVFVQDEESGYTALHRAIYYGNID----CASLLLSKGRSLRIKDKE  118 (1267)
T ss_pred             hhHHHhhccceeeeeeccc-hhHHHHHHHh-cCceeeeccccccchHhhHhhhhchHH----HHHHHHhcCCceEEeccc
Confidence            7889999999999999999 9999999999 89999999975 999999999999999    899999999999999999


Q ss_pred             CccHHHHHHH
Q 048228          373 ARNAIACHLK  382 (629)
Q Consensus       373 G~TpL~~A~~  382 (629)
                      |..||...++
T Consensus       119 glsplq~~~r  128 (1267)
T KOG0783|consen  119 GLSPLQFLSR  128 (1267)
T ss_pred             CCCHHHHHhh
Confidence            9999988876


No 91 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.60  E-value=4.1e-08  Score=106.16  Aligned_cols=87  Identities=28%  Similarity=0.433  Sum_probs=79.9

Q ss_pred             CccccCCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCc-CCchHHHHHHHcCCcHHHHHHHhc
Q 048228          245 LISVTNSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNN-NGRTALHLAVSENIQCNLVELLMT  323 (629)
Q Consensus       245 din~~d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~-~g~TpLh~A~~~~~~~~iv~~Ll~  323 (629)
                      -+|++|..|+|+||+|+.          .+..+++++||++|     ++++.+|. .|+||||.|+.+| +++++.+||.
T Consensus        44 ~anikD~~GR~alH~~~S----------~~k~~~l~wLlqhG-----idv~vqD~ESG~taLHRaiyyG-~idca~lLL~  107 (1267)
T KOG0783|consen   44 LANIKDRYGRTALHIAVS----------ENKNSFLRWLLQHG-----IDVFVQDEESGYTALHRAIYYG-NIDCASLLLS  107 (1267)
T ss_pred             hhhHHHhhccceeeeeec----------cchhHHHHHHHhcC-----ceeeeccccccchHhhHhhhhc-hHHHHHHHHh
Confidence            368899999999999999          59999999999999     56999987 6899999999999 9999999999


Q ss_pred             CCCCCcccCCCCCCcHHHHHHhCCC
Q 048228          324 VPSINLNIQDGEGMTPLDLLKQHPR  348 (629)
Q Consensus       324 ~~gadvn~~d~~G~TpLh~A~~~~~  348 (629)
                       +|+.+.++|.+|..||...++...
T Consensus       108 -~g~SL~i~Dkeglsplq~~~r~~~  131 (1267)
T KOG0783|consen  108 -KGRSLRIKDKEGLSPLQFLSRVLS  131 (1267)
T ss_pred             -cCCceEEecccCCCHHHHHhhccc
Confidence             999999999999999999888433


No 92 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.55  E-value=7.2e-08  Score=61.83  Aligned_cols=29  Identities=38%  Similarity=0.626  Sum_probs=19.9

Q ss_pred             CCchHHHHHHHcCCcHHHHHHHhcCCCCCcc
Q 048228          300 NGRTALHLAVSENIQCNLVELLMTVPSINLN  330 (629)
Q Consensus       300 ~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn  330 (629)
                      +|+||||+||..| +.++|++||+ +|+|+|
T Consensus         1 ~G~T~Lh~A~~~g-~~e~v~~Ll~-~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNG-NIEIVKYLLE-HGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhC-CHHHHHHHHH-cCCCCC
Confidence            3667777777776 6777777776 666665


No 93 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.51  E-value=1.2e-07  Score=62.52  Aligned_cols=32  Identities=31%  Similarity=0.591  Sum_probs=22.2

Q ss_pred             CCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCC
Q 048228          300 NGRTALHLAVSENIQCNLVELLMTVPSINLNIQD  333 (629)
Q Consensus       300 ~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d  333 (629)
                      +|+||||+|+..+ +.+++++||+ +|++++.+|
T Consensus         1 dG~TpLh~A~~~~-~~~~v~~Ll~-~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRG-HPDIVKLLLK-HGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTT-CHHHHHHHHH-TTSCTTCBC
T ss_pred             CcccHHHHHHHHH-HHHHHHHHHH-CcCCCCCCC
Confidence            4667777777777 7777777777 677776665


No 94 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.50  E-value=3.2e-07  Score=94.23  Aligned_cols=84  Identities=18%  Similarity=0.207  Sum_probs=66.7

Q ss_pred             ccCCcCCch------HHHHHHHcCCcHHHHHHHhcCCCCCcccCCC-CCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCC
Q 048228          295 NVTNNNGRT------ALHLAVSENIQCNLVELLMTVPSINLNIQDG-EGMTPLDLLKQHPRSASSEILIKQLISAGGISN  367 (629)
Q Consensus       295 n~~d~~g~T------pLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~-~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn  367 (629)
                      -.+|.+|.|      -||-.++.+ +.++.--||. .||++|..+. .|.||||+|++.|+..    -+++|+-+|||++
T Consensus       121 ~~rDdD~~~~~~LsrQLhasvRt~-nlet~LRll~-lGA~~N~~hpekg~TpLHvAAk~Gq~~----Q~ElL~vYGAD~~  194 (669)
T KOG0818|consen  121 PCRDDDSVTAKDLSKQLHSSVRTG-NLETCLRLLS-LGAQANFFHPEKGNTPLHVAAKAGQIL----QAELLAVYGADPG  194 (669)
T ss_pred             CCCCcchhhHHHHHHHHHHHhhcc-cHHHHHHHHH-cccccCCCCcccCCchhHHHHhccchh----hhhHHhhccCCCC
Confidence            345566654      388888888 8888888888 8999888865 4889999999988876    6777888899999


Q ss_pred             CCCCCCccHHHHHHHhC
Q 048228          368 CQDNVARNAIACHLKGQ  384 (629)
Q Consensus       368 ~~d~~G~TpL~~A~~~~  384 (629)
                      ..|.+|+||+.+|-..+
T Consensus       195 a~d~~GmtP~~~AR~~g  211 (669)
T KOG0818|consen  195 AQDSSGMTPVDYARQGG  211 (669)
T ss_pred             CCCCCCCcHHHHHHhcC
Confidence            99999999988887665


No 95 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.50  E-value=1.2e-07  Score=62.58  Aligned_cols=30  Identities=30%  Similarity=0.535  Sum_probs=28.3

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHhCCCchhh
Q 048228           19 YASPIDFAAANGHYELVKELLHLDTNLLIK   48 (629)
Q Consensus        19 g~TpLh~Aa~~G~~~~v~~LL~~gad~~~~   48 (629)
                      |.||||+||..|+.++|++||++|++++.+
T Consensus         2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~   31 (33)
T PF00023_consen    2 GNTPLHYAAQRGHPDIVKLLLKHGADINAR   31 (33)
T ss_dssp             SBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred             cccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            679999999999999999999999999865


No 96 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.49  E-value=3.8e-07  Score=93.66  Aligned_cols=94  Identities=28%  Similarity=0.305  Sum_probs=80.9

Q ss_pred             ccCCCCCc------hHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCc-CCchHHHHHHHcCCcHHHHHH
Q 048228          248 VTNSHGDT------FLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNN-NGRTALHLAVSENIQCNLVEL  320 (629)
Q Consensus       248 ~~d~~g~T------pLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~-~g~TpLh~A~~~~~~~~iv~~  320 (629)
                      .+|.+|.|      -||..++          .++.++.-.||..|     |++|..+. .|.||||+|+..| +..-+++
T Consensus       122 ~rDdD~~~~~~LsrQLhasvR----------t~nlet~LRll~lG-----A~~N~~hpekg~TpLHvAAk~G-q~~Q~El  185 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVR----------TGNLETCLRLLSLG-----AQANFFHPEKGNTPLHVAAKAG-QILQAEL  185 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhh----------cccHHHHHHHHHcc-----cccCCCCcccCCchhHHHHhcc-chhhhhH
Confidence            34555554      3788888          59999999999999     77888765 6899999999999 9999999


Q ss_pred             HhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHH
Q 048228          321 LMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQ  358 (629)
Q Consensus       321 Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~  358 (629)
                      |+- +|||+++.|.+|+||+.+|-..|+.+..+.++++
T Consensus       186 L~v-YGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~  222 (669)
T KOG0818|consen  186 LAV-YGADPGAQDSSGMTPVDYARQGGHHELAERLVEI  222 (669)
T ss_pred             Hhh-ccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence            999 9999999999999999999999999977766654


No 97 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.48  E-value=7.1e-08  Score=98.49  Aligned_cols=94  Identities=20%  Similarity=0.270  Sum_probs=83.1

Q ss_pred             CCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcc
Q 048228          251 SHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLN  330 (629)
Q Consensus       251 ~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn  330 (629)
                      .++..++++|+.          .|++..++.+.-.|     .|++.+|.+.+|+||+|+..| +.+++++||+..++|++
T Consensus       504 ~~~~i~~~~aa~----------~GD~~alrRf~l~g-----~D~~~~DyD~RTaLHvAAaEG-~v~v~kfl~~~~kv~~~  567 (622)
T KOG0506|consen  504 NDTVINVMYAAK----------NGDLSALRRFALQG-----MDLETKDYDDRTALHVAAAEG-HVEVVKFLLNACKVDPD  567 (622)
T ss_pred             ccchhhhhhhhh----------cCCHHHHHHHHHhc-----ccccccccccchhheeecccC-ceeHHHHHHHHHcCCCC
Confidence            456678999999          59999999988888     669999999999999999999 99999999998899999


Q ss_pred             cCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCC
Q 048228          331 IQDGEGMTPLDLLKQHPRSASSEILIKQLISAGG  364 (629)
Q Consensus       331 ~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Ga  364 (629)
                      .+|..|+|||.-|...++.+    ++++|-++-.
T Consensus       568 ~kDRw~rtPlDdA~~F~h~~----v~k~L~~~~~  597 (622)
T KOG0506|consen  568 PKDRWGRTPLDDAKHFKHKE----VVKLLEEAQY  597 (622)
T ss_pred             hhhccCCCcchHhHhcCcHH----HHHHHHHHhc
Confidence            99999999999999999988    6777665543


No 98 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.48  E-value=3.6e-07  Score=95.01  Aligned_cols=101  Identities=27%  Similarity=0.260  Sum_probs=88.9

Q ss_pred             cCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCC-ccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCccccCC
Q 048228           90 KGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPL-LVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPRCCLSS  168 (629)
Q Consensus        90 ~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~-~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~  168 (629)
                      .|.+..+++.+..+.||+|+..|+-|+|+|||++++. +.+..|+.|.|+||-||+. ++..+.++|++.|++....   
T Consensus       888 ~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~-~~r~vc~~lvdagasl~kt---  963 (1004)
T KOG0782|consen  888 NGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQ-RNRAVCQLLVDAGASLRKT---  963 (1004)
T ss_pred             cCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh-cchHHHHHHHhcchhheec---
Confidence            5788999999999999999999999999999999874 3566789999999999776 8889999999999977654   


Q ss_pred             CCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhC
Q 048228          169 GGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGD  210 (629)
Q Consensus       169 ~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~  210 (629)
                                      |..|.||-..|-..|+.++..||-.+
T Consensus       964 ----------------d~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  964 ----------------DSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             ----------------ccCCCChHHHHHhcCCchHHHHHhhh
Confidence                            44588999999999999999998764


No 99 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.46  E-value=2.2e-07  Score=94.93  Aligned_cols=95  Identities=11%  Similarity=0.099  Sum_probs=83.8

Q ss_pred             CCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCCCCcc
Q 048228          297 TNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDNVARN  375 (629)
Q Consensus       297 ~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~~G~T  375 (629)
                      ++.++...+++|+..| ++..++-+.- .|.|++.+|.+.+|+||+|+..|+.+    ++++||+ .+.|++.+|..|+|
T Consensus       502 ~~~~~~i~~~~aa~~G-D~~alrRf~l-~g~D~~~~DyD~RTaLHvAAaEG~v~----v~kfl~~~~kv~~~~kDRw~rt  575 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNG-DLSALRRFAL-QGMDLETKDYDDRTALHVAAAEGHVE----VVKFLLNACKVDPDPKDRWGRT  575 (622)
T ss_pred             ccccchhhhhhhhhcC-CHHHHHHHHH-hcccccccccccchhheeecccCcee----HHHHHHHHHcCCCChhhccCCC
Confidence            3456678999999999 8888887777 79999999999999999999999999    8888886 68999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCChhhHHHHHHcCC
Q 048228          376 AIACHLKGQGIGVSPGSSFRVPDAEIFLYTGI  407 (629)
Q Consensus       376 pL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Ga  407 (629)
                      ||.-|....          +.+++++|-+.-.
T Consensus       576 PlDdA~~F~----------h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  576 PLDDAKHFK----------HKEVVKLLEEAQY  597 (622)
T ss_pred             cchHhHhcC----------cHHHHHHHHHHhc
Confidence            999999887          6899999987643


No 100
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.38  E-value=7.1e-07  Score=93.33  Aligned_cols=87  Identities=24%  Similarity=0.268  Sum_probs=73.4

Q ss_pred             ccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchH
Q 048228          273 DHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASS  352 (629)
Q Consensus       273 ~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~  352 (629)
                      ..++..+-+||.+| .....+-...+.+|+|+||+||..| +..+.++||- +|+|+-++|..|+|+|.||-+.|..+  
T Consensus       634 ~~Dl~t~~lLLAhg-~~~e~~~t~~~~~grt~LHLa~~~g-nVvl~QLLiW-yg~dv~~rda~g~t~l~yar~a~sqe--  708 (749)
T KOG0705|consen  634 AEDLQTAILLLAHG-SREEVNETCGEGDGRTALHLAARKG-NVVLAQLLIW-YGVDVMARDAHGRTALFYARQAGSQE--  708 (749)
T ss_pred             HHHHHHHHHHHhcc-CchhhhccccCCCCcchhhhhhhhc-chhHHHHHHH-hCccceecccCCchhhhhHhhcccHH--
Confidence            47788888999988 3312222334567899999999999 9999999999 99999999999999999999999877  


Q ss_pred             HHHHHHHHHcCCCC
Q 048228          353 EILIKQLISAGGIS  366 (629)
Q Consensus       353 ~~lv~~Ll~~Gadv  366 (629)
                        ++..|+.+|..-
T Consensus       709 --c~d~llq~gcp~  720 (749)
T KOG0705|consen  709 --CIDVLLQYGCPD  720 (749)
T ss_pred             --HHHHHHHcCCCc
Confidence              999999999753


No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.35  E-value=7e-07  Score=93.10  Aligned_cols=58  Identities=26%  Similarity=0.426  Sum_probs=41.5

Q ss_pred             hhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCch
Q 048228          292 DIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSAS  351 (629)
Q Consensus       292 a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~  351 (629)
                      ..++.+|..|+||||+|+..| +.+.++.|+. +|+|+-.+|++|++|||.|+..|+...
T Consensus        46 ~~id~~D~~g~TpLhlAV~Lg-~~~~a~~Ll~-a~Adv~~kN~~gWs~L~EAv~~g~~q~  103 (560)
T KOG0522|consen   46 LVIDRRDPPGRTPLHLAVRLG-HVEAARILLS-AGADVSIKNNEGWSPLHEAVSTGNEQI  103 (560)
T ss_pred             ceeccccCCCCccHHHHHHhc-CHHHHHHHHh-cCCCccccccccccHHHHHHHcCCHHH
Confidence            446677777777777777777 7777777777 777777777777777777777777653


No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.34  E-value=8.1e-07  Score=92.41  Aligned_cols=81  Identities=17%  Similarity=0.247  Sum_probs=40.8

Q ss_pred             hccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCC--cccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCC
Q 048228          294 INVTNNNGRTALHLAVSENIQCNLVELLMTVPSIN--LNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDN  371 (629)
Q Consensus       294 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gad--vn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~  371 (629)
                      +-.++.+..|.||+|+..| +-+||++||+ +|-.  ++..|..|.|+||-|+..++..    +.++|+++||.+...|.
T Consensus       892 ll~~~~~~~sllh~a~~tg-~~eivkyild-h~p~elld~~de~get~lhkaa~~~~r~----vc~~lvdagasl~ktd~  965 (1004)
T KOG0782|consen  892 LLIQGPDHCSLLHYAAKTG-NGEIVKYILD-HGPSELLDMADETGETALHKAACQRNRA----VCQLLVDAGASLRKTDS  965 (1004)
T ss_pred             eEeeCcchhhHHHHHHhcC-ChHHHHHHHh-cCCHHHHHHHhhhhhHHHHHHHHhcchH----HHHHHHhcchhheeccc
Confidence            4444555555555555555 5555555555 4322  3344445555555555544443    45555555555555555


Q ss_pred             CCccHHHHH
Q 048228          372 VARNAIACH  380 (629)
Q Consensus       372 ~G~TpL~~A  380 (629)
                      .|.||-..|
T Consensus       966 kg~tp~era  974 (1004)
T KOG0782|consen  966 KGKTPQERA  974 (1004)
T ss_pred             CCCChHHHH
Confidence            555554433


No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.27  E-value=2.2e-06  Score=89.73  Aligned_cols=97  Identities=22%  Similarity=0.246  Sum_probs=79.4

Q ss_pred             HHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHc
Q 048228           67 QFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARS  146 (629)
Q Consensus        67 ~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~  146 (629)
                      .|..|+.......+-+|+..+.....+-..-+.+|+|+||+||..|++.+.++|+-+|++ +..+|..|.|+|.|| -+.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d-v~~rda~g~t~l~ya-r~a  704 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD-VMARDAHGRTALFYA-RQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc-ceecccCCchhhhhH-hhc
Confidence            456666667777777788733333344455677899999999999999999999999988 688999999999998 888


Q ss_pred             CCHHHHHHHHHcCCCCccc
Q 048228          147 KNSEVFRLLLDNAVAPRCC  165 (629)
Q Consensus       147 g~~~iv~~Ll~~Ga~~~~~  165 (629)
                      |..+|+.+|+.+|+...+.
T Consensus       705 ~sqec~d~llq~gcp~e~~  723 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCPDECG  723 (749)
T ss_pred             ccHHHHHHHHHcCCCcccc
Confidence            9999999999999876644


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.23  E-value=2.1e-06  Score=89.67  Aligned_cols=78  Identities=23%  Similarity=0.247  Sum_probs=66.7

Q ss_pred             hHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHHH
Q 048228          303 TALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHLK  382 (629)
Q Consensus       303 TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~~  382 (629)
                      -|||+++.......+.+.|....+..|+.+|..|+||||+|+..|+.+    .++.|+.+|||+..+|+.|++|||.|+.
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~----~a~~Ll~a~Adv~~kN~~gWs~L~EAv~   97 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVE----AARILLSAGADVSIKNNEGWSPLHEAVS   97 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHH----HHHHHHhcCCCccccccccccHHHHHHH
Confidence            469999988745556665555467789999999999999999999988    8999999999999999999999999985


Q ss_pred             hC
Q 048228          383 GQ  384 (629)
Q Consensus       383 ~~  384 (629)
                      .+
T Consensus        98 ~g   99 (560)
T KOG0522|consen   98 TG   99 (560)
T ss_pred             cC
Confidence            43


No 105
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.17  E-value=5.2e-06  Score=91.62  Aligned_cols=135  Identities=16%  Similarity=0.065  Sum_probs=99.7

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHH
Q 048228           63 DDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYA  142 (629)
Q Consensus        63 ~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~A  142 (629)
                      .++--+..|++.|+...++-.++.......++|..|.-|+++|+.|+.+.+.|++++|+++....        ..+|++|
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~a   95 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLA   95 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHH
Confidence            45556788888887766655555333355899999999999999999999999999999986432        2457887


Q ss_pred             HHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcc
Q 048228          143 AARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVL  215 (629)
Q Consensus       143 A~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~  215 (629)
                       +..|..++|++++.+-.........         .......-..+.|||..||..+++||++.||.+|+.+.
T Consensus        96 -I~~~~v~~VE~ll~~~~~~~~~~~~---------~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   96 -IAVGSVPLVELLLVHFVDAPYLERS---------GDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             -HHHHHHHHHHHHHhcccccchhccc---------cccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence             8889999999999975433211110         00000111234699999999999999999999998774


No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.06  E-value=1.4e-05  Score=88.30  Aligned_cols=121  Identities=21%  Similarity=0.124  Sum_probs=96.4

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCC--chhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccccc
Q 048228           21 SPIDFAAANGHYELVKELLHLDTN--LLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRA   98 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad--~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d   98 (629)
                      --...||.+|+.-.|+..|+....  +|+..          .+.-|.++|+.|+.+.+.+++.+|++    ++..+    
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc----------~d~lGr~al~iai~nenle~~eLLl~----~~~~~----   88 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINC----------RDPLGRLALHIAIDNENLELQELLLD----TSSEE----   88 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhc----------cChHhhhceecccccccHHHHHHHhc----Ccccc----
Confidence            456789999999999999987544  44432          33569999999999999999999998    54443    


Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHhcCCCc---------cccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCCCCc
Q 048228           99 GYGGWLLYTAASAGDVRFVKELLQRDPLL---------VFGEGEYGVTDILYAAARSKNSEVFRLLLDNAVAPR  163 (629)
Q Consensus        99 ~~g~tpLh~A~~~g~~~~v~~LL~~g~~~---------~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~  163 (629)
                         ..+|.+|+..|..++|+.++.+....         ....-.-+.|||.+| |..++.||+++||++|+++.
T Consensus        89 ---gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLA-Ah~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen   89 ---GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLA-AHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             ---chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHH-HHhcchHHHHHHHHcCCCCC
Confidence               45899999999999999999875321         112234578999999 56699999999999999875


No 107
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.04  E-value=4.3e-06  Score=94.89  Aligned_cols=81  Identities=23%  Similarity=0.318  Sum_probs=76.3

Q ss_pred             CcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHH
Q 048228          298 NNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAI  377 (629)
Q Consensus       298 d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL  377 (629)
                      -..|.|+||.|+..+ ..-++++|++ .|+++|..|..|+||||.+...|+..    .+.+|+++||+.++.+.+|.+||
T Consensus       653 ~~~~~s~lh~a~~~~-~~~~~e~ll~-~ga~vn~~d~~g~~plh~~~~~g~~~----~~~~ll~~~a~~~a~~~~~~~~l  726 (785)
T KOG0521|consen  653 LCIGCSLLHVAVGTG-DSGAVELLLQ-NGADVNALDSKGRTPLHHATASGHTS----IACLLLKRGADPNAFDPDGKLPL  726 (785)
T ss_pred             hhcccchhhhhhccc-hHHHHHHHHh-cCCcchhhhccCCCcchhhhhhcccc----hhhhhccccccccccCccCcchh
Confidence            346899999999999 9999999999 99999999999999999999999998    88889999999999999999999


Q ss_pred             HHHHHhC
Q 048228          378 ACHLKGQ  384 (629)
Q Consensus       378 ~~A~~~~  384 (629)
                      .+|....
T Consensus       727 ~~a~~~~  733 (785)
T KOG0521|consen  727 DIAMEAA  733 (785)
T ss_pred             hHHhhhc
Confidence            9998773


No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.93  E-value=3.3e-05  Score=70.44  Aligned_cols=74  Identities=20%  Similarity=0.223  Sum_probs=64.5

Q ss_pred             hhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCC-CCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCC
Q 048228          292 DIINVTNNNGRTALHLAVSENIQCNLVELLMTVPS-INLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQD  370 (629)
Q Consensus       292 a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~g-advn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d  370 (629)
                      .+||++|..|+|||+.|+..| ..+.+.+|+. .| ++|...|..|.+++.+|-+.|..+    +++.|.+.-.+-...+
T Consensus         3 ~~in~rD~fgWTalmcaa~eg-~~eavsyllg-rg~a~vgv~d~ssldaaqlaek~g~~~----fvh~lfe~~~ets~p~   76 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEG-SNEAVSYLLG-RGVAFVGVTDESSLDAAQLAEKGGAQA----FVHSLFENDRETSHPM   76 (223)
T ss_pred             CCccchhhhcchHHHHHhhhc-chhHHHHHhc-cCcccccccccccchHHHHHHhcChHH----HHHHHHHHhccCCCcc
Confidence            359999999999999999999 9999999999 89 999999999999999999999988    7777777654444444


Q ss_pred             C
Q 048228          371 N  371 (629)
Q Consensus       371 ~  371 (629)
                      +
T Consensus        77 n   77 (223)
T KOG2384|consen   77 N   77 (223)
T ss_pred             c
Confidence            4


No 109
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.85  E-value=2.1e-05  Score=89.38  Aligned_cols=91  Identities=23%  Similarity=0.317  Sum_probs=80.9

Q ss_pred             CCCcccc--CCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHH
Q 048228          243 PSLISVT--NSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVEL  320 (629)
Q Consensus       243 gadin~~--d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~  320 (629)
                      ++++|..  -..|.|+||.|+.          .+..-++++|++.|     +++|..|..|+||||.+...| +...+..
T Consensus       644 ~~~~n~~~~~~~~~s~lh~a~~----------~~~~~~~e~ll~~g-----a~vn~~d~~g~~plh~~~~~g-~~~~~~~  707 (785)
T KOG0521|consen  644 GCCENWPVVLCIGCSLLHVAVG----------TGDSGAVELLLQNG-----ADVNALDSKGRTPLHHATASG-HTSIACL  707 (785)
T ss_pred             hhhhccchhhhcccchhhhhhc----------cchHHHHHHHHhcC-----CcchhhhccCCCcchhhhhhc-ccchhhh
Confidence            4444442  2468999999999          59999999999999     779999999999999999999 9999999


Q ss_pred             HhcCCCCCcccCCCCCCcHHHHHHhCCCCc
Q 048228          321 LMTVPSINLNIQDGEGMTPLDLLKQHPRSA  350 (629)
Q Consensus       321 Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~  350 (629)
                      |++ .|++.++.+.+|.+||++|....+.+
T Consensus       708 ll~-~~a~~~a~~~~~~~~l~~a~~~~~~d  736 (785)
T KOG0521|consen  708 LLK-RGADPNAFDPDGKLPLDIAMEAANAD  736 (785)
T ss_pred             hcc-ccccccccCccCcchhhHHhhhcccc
Confidence            999 99999999999999999998886655


No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.75  E-value=5.7e-05  Score=68.92  Aligned_cols=69  Identities=23%  Similarity=0.169  Sum_probs=63.7

Q ss_pred             CCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcCC
Q 048228           91 GHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNAV  160 (629)
Q Consensus        91 g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga  160 (629)
                      +.++|.+|.+|+|+|+.|+..|..+.|.+|+.+|+..+...|..|.+.+.+| -+.|..+++..|.+.-.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqla-ek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLA-EKGGAQAFVHSLFENDR   70 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHH-HhcChHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999766899999999999998 89999999999998743


No 111
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.75  E-value=7.3e-05  Score=74.93  Aligned_cols=70  Identities=20%  Similarity=0.210  Sum_probs=60.3

Q ss_pred             chHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHH
Q 048228          302 RTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAI  377 (629)
Q Consensus       302 ~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL  377 (629)
                      .--|..||+.| ..+.|+.|++ .|.+||.+|.....||.+|+..||.+    ++++|+++||-...-..+|.-.+
T Consensus        37 f~elceacR~G-D~d~v~~LVe-tgvnVN~vD~fD~spL~lAsLcGHe~----vvklLLenGAiC~rdtf~G~RC~  106 (516)
T KOG0511|consen   37 FGELCEACRAG-DVDRVRYLVE-TGVNVNAVDRFDSSPLYLASLCGHED----VVKLLLENGAICSRDTFDGDRCH  106 (516)
T ss_pred             hHHHHHHhhcc-cHHHHHHHHH-hCCCcchhhcccccHHHHHHHcCcHH----HHHHHHHcCCcccccccCcchhh
Confidence            34588999999 9999999999 99999999999999999999999987    89999999997775556665554


No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.68  E-value=0.0001  Score=83.36  Aligned_cols=123  Identities=17%  Similarity=0.103  Sum_probs=96.2

Q ss_pred             ccchHHHHHHhcCCHHHHHHHHhC-CCCcccccCCCCCcHHHHHHhcCCcce---ecccCCCCccccCCCCCchHHHHHh
Q 048228          187 MMNRAVHAVARGGNLDILRQLLGD-CENVLAYRDVQGSTILHSASGRGQVEV---LIAKSPSLISVTNSHGDTFLHMVVA  262 (629)
Q Consensus       187 ~g~t~Lh~A~~~g~~~iv~~Ll~~-gad~~~~~d~~g~TpLh~A~~~g~~~i---lL~~~gadin~~d~~g~TpLh~A~~  262 (629)
                      .|++.+|.++..+...+++.+++- |.... ..|.+|.-.+|+ |..++++.   ++...|..++.+|..|+||||+|+.
T Consensus       573 r~~lllhL~a~~lyawLie~~~e~~~~~~~-eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~  650 (975)
T KOG0520|consen  573 RDMLLLHLLAELLYAWLIEKVIEWAGSGDL-ELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAF  650 (975)
T ss_pred             cchHHHHHHHHHhHHHHHHHHhcccccCch-hhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchHhh
Confidence            367999999999999999999996 55554 378888888888 45555666   6677889999999999999999999


Q ss_pred             cCCCCCccccccHHHHHHHHHcCCCCcch--hhhccCCcCCchHHHHHHHcCCcHHHHHHHhc
Q 048228          263 GFRSPGFRRVDHQIQLMEQLVSGKIVEVK--DIINVTNNNGRTALHLAVSENIQCNLVELLMT  323 (629)
Q Consensus       263 ~~~~~~~~~~~~~~eivk~Ll~~g~~d~~--a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~  323 (629)
                                .|+..++..|++.| .+..  .++......|.|+-..|-..| +..+.-+|-+
T Consensus       651 ----------~G~e~l~a~l~~lg-a~~~~~tdps~~~p~g~ta~~la~s~g-~~gia~~lse  701 (975)
T KOG0520|consen  651 ----------RGREKLVASLIELG-ADPGAVTDPSPETPGGKTAADLARANG-HKGIAGYLSE  701 (975)
T ss_pred             ----------cCHHHHHHHHHHhc-cccccccCCCCCCCCCCchhhhhhccc-ccchHHHHhh
Confidence                      49999999999776 2211  233334456888888888777 7777777766


No 113
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.62  E-value=6.1e-05  Score=85.13  Aligned_cols=124  Identities=18%  Similarity=0.007  Sum_probs=100.2

Q ss_pred             CCCcHHHHHHHCCCHHHHHHHHHh-CCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccc
Q 048228           18 WYASPIDFAAANGHYELVKELLHL-DTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLI   96 (629)
Q Consensus        18 ~g~TpLh~Aa~~G~~~~v~~LL~~-gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~   96 (629)
                      -|.|-||+++..|..-+++.+++- |....            +.+.++...+|.++..|.+.++.++.-    .|..+++
T Consensus       573 r~~lllhL~a~~lyawLie~~~e~~~~~~~------------eld~d~qgV~hfca~lg~ewA~ll~~~----~~~ai~i  636 (975)
T KOG0520|consen  573 RDMLLLHLLAELLYAWLIEKVIEWAGSGDL------------ELDRDGQGVIHFCAALGYEWAFLPISA----DGVAIDI  636 (975)
T ss_pred             cchHHHHHHHHHhHHHHHHHHhcccccCch------------hhcccCCChhhHhhhcCCceeEEEEee----ccccccc
Confidence            456999999999999999999996 44332            244678888888888787777777766    8999999


Q ss_pred             ccCCCChHHHHHHHcCCHHHHHHHHhcCCCccc-----cCCCCCCCHHHHHHHHcCCHHHHHHHHHc
Q 048228           97 RAGYGGWLLYTAASAGDVRFVKELLQRDPLLVF-----GEGEYGVTDILYAAARSKNSEVFRLLLDN  158 (629)
Q Consensus        97 ~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~-----~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~  158 (629)
                      +|..|+||||+|+..|+..++..|++.|+....     .....|.|+.-.| ...|+..+.-+|-+.
T Consensus       637 ~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la-~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  637 RDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLA-RANGHKGIAGYLSEK  702 (975)
T ss_pred             ccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhh-hcccccchHHHHhhh
Confidence            999999999999999999999999988765432     2345588887777 577998888888775


No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.61  E-value=0.00019  Score=72.08  Aligned_cols=84  Identities=21%  Similarity=0.240  Sum_probs=67.4

Q ss_pred             cHHHHHHhcCcHHHHHHHhhcccccCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHH
Q 048228           66 EQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAAR  145 (629)
Q Consensus        66 t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~  145 (629)
                      .-|..||+.|..+.++.|++    .|.++|..|.....||++|+..||.++|++||++|+.. .....+|.- .||+|. 
T Consensus        38 ~elceacR~GD~d~v~~LVe----tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC-~rdtf~G~R-C~YgaL-  110 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVE----TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC-SRDTFDGDR-CHYGAL-  110 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHH----hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc-cccccCcch-hhhhhh-
Confidence            35889999999999999999    99999999999999999999999999999999999863 322334544 477633 


Q ss_pred             cCCHHHHHHHHHc
Q 048228          146 SKNSEVFRLLLDN  158 (629)
Q Consensus       146 ~g~~~iv~~Ll~~  158 (629)
                        +..|=++||.+
T Consensus       111 --nd~IR~mllsy  121 (516)
T KOG0511|consen  111 --NDRIRRMLLSY  121 (516)
T ss_pred             --hHHHHHHHHHH
Confidence              24455566654


No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.81  E-value=0.0019  Score=39.74  Aligned_cols=28  Identities=36%  Similarity=0.528  Sum_probs=25.6

Q ss_pred             CCcHHHHHHHCCCHHHHHHHHHhCCCch
Q 048228           19 YASPIDFAAANGHYELVKELLHLDTNLL   46 (629)
Q Consensus        19 g~TpLh~Aa~~G~~~~v~~LL~~gad~~   46 (629)
                      |.||||+|+..|+.+++++|++.|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5699999999999999999999998763


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.15  E-value=0.0074  Score=36.88  Aligned_cols=28  Identities=25%  Similarity=0.463  Sum_probs=25.5

Q ss_pred             cchHHHHHHhcCCHHHHHHHHhCCCCcc
Q 048228          188 MNRAVHAVARGGNLDILRQLLGDCENVL  215 (629)
Q Consensus       188 g~t~Lh~A~~~g~~~iv~~Ll~~gad~~  215 (629)
                      |.||||+|+..++.+++++|++.|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5699999999999999999999988764


No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.80  E-value=0.0081  Score=62.86  Aligned_cols=63  Identities=16%  Similarity=0.127  Sum_probs=53.5

Q ss_pred             cHHHHHHHhcCCCCCcccC------CCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHH
Q 048228          314 QCNLVELLMTVPSINLNIQ------DGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHL  381 (629)
Q Consensus       314 ~~~iv~~Ll~~~gadvn~~------d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~  381 (629)
                      -.+.|++|.+ ++++.|..      +..--|+||+|+..|...    +|.+||+.|+|+..+|..|+||..++.
T Consensus       403 ~p~~ie~lke-n~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k----~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKE-NLLSGNFDVTPEANDYLTSTFLHYAAAQGARK----CVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHh-cCCcccccccccccccccchHHHHHHhcchHH----HHHHHHHhcCCchhcccCCCCcccccc
Confidence            5788999999 88887654      444669999999999877    999999999999999999999986654


No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.65  E-value=0.012  Score=61.75  Aligned_cols=70  Identities=13%  Similarity=0.127  Sum_probs=53.6

Q ss_pred             CCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHH
Q 048228          147 KNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTIL  226 (629)
Q Consensus       147 g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpL  226 (629)
                      .-...+++|.+++++.|+.....             ..+..--|+||+|+..|.-++|.+||+.|+|+.. .|..|+||.
T Consensus       402 ~~p~~ie~lken~lsgnf~~~pe-------------~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~-kd~~Grtpy  467 (591)
T KOG2505|consen  402 PEPDSIEALKENLLSGNFDVTPE-------------ANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST-KDGAGRTPY  467 (591)
T ss_pred             CchhHHHHHHhcCCccccccccc-------------ccccccchHHHHHHhcchHHHHHHHHHhcCCchh-cccCCCCcc
Confidence            34677888888888877543221             1222245999999999999999999999999875 999999998


Q ss_pred             HHHH
Q 048228          227 HSAS  230 (629)
Q Consensus       227 h~A~  230 (629)
                      .++.
T Consensus       468 ~ls~  471 (591)
T KOG2505|consen  468 SLSA  471 (591)
T ss_pred             cccc
Confidence            8876


No 119
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.43  E-value=0.11  Score=49.39  Aligned_cols=108  Identities=17%  Similarity=0.221  Sum_probs=76.9

Q ss_pred             cHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCC----CCCcHHHHHHhCCCC
Q 048228          274 HQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMTVPSINLNIQDG----EGMTPLDLLKQHPRS  349 (629)
Q Consensus       274 ~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~----~G~TpLh~A~~~~~~  349 (629)
                      .+.+-+.-++...            .+-.++|.+|+..+ ..+++.+|+.  ..++..+|-    .+.--+.++......
T Consensus       164 sN~~~i~~~VtdK------------kdA~~Am~~si~~~-K~dva~~lls--~f~ft~~dv~~~~~~~ydieY~LS~h~a  228 (284)
T PF06128_consen  164 SNYEEISNLVTDK------------KDAHQAMWLSIGNA-KEDVALYLLS--KFNFTKQDVASMEKELYDIEYLLSEHSA  228 (284)
T ss_pred             cCHHHHHHHhcch------------HHHHHHHHHHhccc-HHHHHHHHHh--hcceecchhhhcCcchhhHHHHHhhcCC
Confidence            4555555555443            23458899999887 8999999998  445544442    233345555554442


Q ss_pred             chHHHHHHHHHHcC-CCCCC---CCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCC
Q 048228          350 ASSEILIKQLISAG-GISNC---QDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIE  408 (629)
Q Consensus       350 ~~~~~lv~~Ll~~G-advn~---~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad  408 (629)
                        ...+++++|++| ++||.   +-+.|.|-|.-|++..          +.+++.+||++||-
T Consensus       229 --~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~----------~~emi~~Llk~GA~  279 (284)
T PF06128_consen  229 --SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYK----------NSEMIAFLLKYGAI  279 (284)
T ss_pred             --cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcC----------cHHHHHHHHHcCcc
Confidence              355899999999 67774   4578999999999987          68999999999984


No 120
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.80  E-value=0.68  Score=42.83  Aligned_cols=135  Identities=13%  Similarity=-0.009  Sum_probs=91.8

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCcccccCC
Q 048228           21 SPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRAGY  100 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d~~  100 (629)
                      -.|..|+.++.+.+++..-+...+-               .....+.+-.||+..+.++++.+-.       +.  .-.+
T Consensus        48 CLl~HAVk~nmL~ILqkyke~L~~~---------------~~~~q~LFElAC~~qkydiV~WI~q-------nL--~i~~  103 (192)
T PF03158_consen   48 CLLYHAVKYNMLSILQKYKEDLENE---------------RYLNQELFELACEEQKYDIVKWIGQ-------NL--HIYN  103 (192)
T ss_pred             HHHHHHHHcCcHHHHHHHHHHhhcc---------------hhHHHHHHHHHHHHccccHHHHHhh-------cc--CCCC
Confidence            3577889999999988877654331               0235678889999999999999965       11  1122


Q ss_pred             CChHHHHHHHcCCHHHHH----HHHhcCCCccccCCCCCCCH-----HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc
Q 048228          101 GGWLLYTAASAGDVRFVK----ELLQRDPLLVFGEGEYGVTD-----ILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGE  171 (629)
Q Consensus       101 g~tpLh~A~~~g~~~~v~----~LL~~g~~~~~~~d~~g~tp-----L~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~  171 (629)
                      -.+.+-.|....++++..    +++++.-.    .+....+-     |..| +..|-...|.-.|++|-+++        
T Consensus       104 ~~~iFdIA~~~kDlsLyslGY~l~~~~~~~----~~~~d~~~ll~~hl~~a-~~kgll~F~letlkygg~~~--------  170 (192)
T PF03158_consen  104 PEDIFDIAFAKKDLSLYSLGYKLLFNRMMS----EHNEDPTSLLTQHLEKA-AAKGLLPFVLETLKYGGNVD--------  170 (192)
T ss_pred             chhhhhhhhhccchhHHHHHHHHHHhhccc----ccccCHHHHHHHHHHHH-HHCCCHHHHHHHHHcCCccc--------
Confidence            345677888888887633    23333211    01111111     3444 67799999999999987655        


Q ss_pred             hhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHh
Q 048228          172 FEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLG  209 (629)
Q Consensus       172 ~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~  209 (629)
                                       .++|..|+..++-.++.+++.
T Consensus       171 -----------------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  171 -----------------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             -----------------HHHHHHHHHhhHHHHHHHhhc
Confidence                             378999999999999999875


No 121
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=93.64  E-value=0.36  Score=45.89  Aligned_cols=115  Identities=17%  Similarity=0.089  Sum_probs=75.5

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhhcccccCCCccccc--
Q 048228           21 SPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHDCETKKGHNSLIRA--   98 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~~~~~~g~~~~~~d--   98 (629)
                      -.|--|+..-+++.+.-+....-                   +..+++-+|+.++...++.+|+.     ..+....|  
T Consensus       155 isledAV~AsN~~~i~~~VtdKk-------------------dA~~Am~~si~~~K~dva~~lls-----~f~ft~~dv~  210 (284)
T PF06128_consen  155 ISLEDAVKASNYEEISNLVTDKK-------------------DAHQAMWLSIGNAKEDVALYLLS-----KFNFTKQDVA  210 (284)
T ss_pred             ccHHHHHhhcCHHHHHHHhcchH-------------------HHHHHHHHHhcccHHHHHHHHHh-----hcceecchhh
Confidence            34667777777777776665322                   23457777777777777777765     11221111  


Q ss_pred             --CCCChHHHHHHH--cCCHHHHHHHHhcCCCccc---cCCCCCCCHHHHHHHHcCCHHHHHHHHHcCC
Q 048228           99 --GYGGWLLYTAAS--AGDVRFVKELLQRDPLLVF---GEGEYGVTDILYAAARSKNSEVFRLLLDNAV  160 (629)
Q Consensus        99 --~~g~tpLh~A~~--~g~~~~v~~LL~~g~~~~~---~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~Ga  160 (629)
                        ..+..-+.++..  ..+..+++++|++|-..++   .+-..|.|-|--| +.+++.+++.+||++||
T Consensus       211 ~~~~~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA-~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  211 SMEKELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNA-MKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             hcCcchhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhH-HhcCcHHHHHHHHHcCc
Confidence              112223444443  3456889999999865544   3467799988887 99999999999999998


No 122
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=91.77  E-value=1.2  Score=41.34  Aligned_cols=138  Identities=10%  Similarity=0.098  Sum_probs=87.2

Q ss_pred             CCHHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhCCCCcc
Q 048228          136 VTDILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGDCENVL  215 (629)
Q Consensus       136 ~tpL~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~gad~~  215 (629)
                      ...|++.|+..+-..|++.+-+...+-                      -...++.+..||+..+.|+|+++-+.   . 
T Consensus        46 ~~CLl~HAVk~nmL~ILqkyke~L~~~----------------------~~~~q~LFElAC~~qkydiV~WI~qn---L-   99 (192)
T PF03158_consen   46 MWCLLYHAVKYNMLSILQKYKEDLENE----------------------RYLNQELFELACEEQKYDIVKWIGQN---L-   99 (192)
T ss_pred             HHHHHHHHHHcCcHHHHHHHHHHhhcc----------------------hhHHHHHHHHHHHHccccHHHHHhhc---c-
Confidence            345777778988888888877643211                      01245788899999999999999432   2 


Q ss_pred             cccCCCCCcHHHHHHhcCCcce------ecccCCCCccccCC--CCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCC
Q 048228          216 AYRDVQGSTILHSASGRGQVEV------LIAKSPSLISVTNS--HGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKI  287 (629)
Q Consensus       216 ~~~d~~g~TpLh~A~~~g~~~i------lL~~~gadin~~d~--~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~  287 (629)
                        .-.+-.+-.-.|....++++      ++......-...|.  --.--|..|+.          .|-...+...+++| 
T Consensus       100 --~i~~~~~iFdIA~~~kDlsLyslGY~l~~~~~~~~~~~d~~~ll~~hl~~a~~----------kgll~F~letlkyg-  166 (192)
T PF03158_consen  100 --HIYNPEDIFDIAFAKKDLSLYSLGYKLLFNRMMSEHNEDPTSLLTQHLEKAAA----------KGLLPFVLETLKYG-  166 (192)
T ss_pred             --CCCCchhhhhhhhhccchhHHHHHHHHHHhhcccccccCHHHHHHHHHHHHHH----------CCCHHHHHHHHHcC-
Confidence              22233456778888888877      33322111100000  00023566777          47888888888877 


Q ss_pred             CcchhhhccCCcCCchHHHHHHHcCCcHHHHHHHhc
Q 048228          288 VEVKDIINVTNNNGRTALHLAVSENIQCNLVELLMT  323 (629)
Q Consensus       288 ~d~~a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~  323 (629)
                          .+++      .++|..|+.++ +..|+.+++.
T Consensus       167 ----g~~~------~~vls~Av~yn-hRkIL~yfi~  191 (192)
T PF03158_consen  167 ----GNVD------IIVLSQAVKYN-HRKILDYFIR  191 (192)
T ss_pred             ----Cccc------HHHHHHHHHhh-HHHHHHHhhc
Confidence                2222      28888888888 8888888774


No 123
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.74  E-value=0.96  Score=35.89  Aligned_cols=46  Identities=13%  Similarity=0.286  Sum_probs=38.7

Q ss_pred             cHHHHHHHCCCHHHHHHHHHhCCCchhhhhhhHhhhhccccCCCCcHHHHHHhcCcHHHHHHHhh
Q 048228           21 SPIDFAAANGHYELVKELLHLDTNLLIKLTSLRRIRRLETVWDDEEQFDDVAKCRSSVARKLLHD   85 (629)
Q Consensus        21 TpLh~Aa~~G~~~~v~~LL~~gad~~~~~~~~~~~~~~~~~~~~~t~Lh~A~~~~~~~i~~lL~~   85 (629)
                      .-|..|+..|+.|+++.+++.+ .++                  ...+..|+..++.+++++|++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~~~------------------~~~l~~AI~~H~n~i~~~l~~   53 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-KPD------------------NDCLEYAIKSHNNEIADWLIE   53 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-ccH------------------HHHHHHHHHHhhHHHHHHHHH
Confidence            5689999999999999999876 332                  335899999999999999887


No 124
>PLN03218 maturation of RBCL 1; Provisional
Probab=88.45  E-value=6.7  Score=47.46  Aligned_cols=27  Identities=11%  Similarity=0.074  Sum_probs=15.0

Q ss_pred             HHHHhCCCCchHHHHHHHHHHcCCCCC
Q 048228          341 DLLKQHPRSASSEILIKQLISAGGISN  367 (629)
Q Consensus       341 h~A~~~~~~~~~~~lv~~Ll~~Gadvn  367 (629)
                      ...++.|..+....+++.+.+.|..+|
T Consensus       727 ~gy~k~G~~eeAlelf~eM~~~Gi~Pd  753 (1060)
T PLN03218        727 TALCEGNQLPKALEVLSEMKRLGLCPN  753 (1060)
T ss_pred             HHHHHCCCHHHHHHHHHHHHHcCCCCC
Confidence            333556665555555665566665544


No 125
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=86.60  E-value=18  Score=42.03  Aligned_cols=63  Identities=17%  Similarity=0.118  Sum_probs=37.3

Q ss_pred             chHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCC-cHHHHHHhCCCCchHHHHHHHHHHcCCC
Q 048228          302 RTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGM-TPLDLLKQHPRSASSEILIKQLISAGGI  365 (629)
Q Consensus       302 ~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~-TpLh~A~~~~~~~~~~~lv~~Ll~~Gad  365 (629)
                      ++.|.-|+...++.+..+.+.+ .-..+...+..-. .-+...+..|+.+.+..+.+.+.+.|..
T Consensus       497 ~~~Ll~a~~~~g~~~~a~~~~~-~l~~~~p~~~~~y~~L~~~y~~~G~~~~A~~v~~~m~~~g~~  560 (697)
T PLN03081        497 WAALLTACRIHKNLELGRLAAE-KLYGMGPEKLNNYVVLLNLYNSSGRQAEAAKVVETLKRKGLS  560 (697)
T ss_pred             HHHHHHHHHHcCCcHHHHHHHH-HHhCCCCCCCcchHHHHHHHHhCCCHHHHHHHHHHHHHcCCc
Confidence            5566666643337777666655 2222222222222 3344557888888888888888888864


No 126
>PLN03218 maturation of RBCL 1; Provisional
Probab=86.36  E-value=12  Score=45.37  Aligned_cols=228  Identities=14%  Similarity=0.101  Sum_probs=109.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHH----HHHHHHHcCCCCccccCCCCchhhhhcc
Q 048228          103 WLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSE----VFRLLLDNAVAPRCCLSSGGEFEEKLSD  178 (629)
Q Consensus       103 tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~----iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~  178 (629)
                      +.+...+..|+++.+..+++.-...-...|..-++.|..+.++.|..+    +++.+.+.|..++...            
T Consensus       477 sLI~~y~k~G~vd~A~~vf~eM~~~Gv~PdvvTynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~vT------------  544 (1060)
T PLN03218        477 TLISTCAKSGKVDAMFEVFHEMVNAGVEANVHTFGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRVV------------  544 (1060)
T ss_pred             HHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHHH------------
Confidence            345555666666655544443111001123333445555556666653    3334444555444221            


Q ss_pred             chhHHhhhccchHHHHHHhcCCHHHHHHHHhC------CCCcccccCCCCCcHHHHHHhcCCcce------ecccCCCCc
Q 048228          179 SYSVFKWEMMNRAVHAVARGGNLDILRQLLGD------CENVLAYRDVQGSTILHSASGRGQVEV------LIAKSPSLI  246 (629)
Q Consensus       179 ~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~------gad~~~~~d~~g~TpLh~A~~~g~~~i------lL~~~gadi  246 (629)
                               .++.+...++.|.++-+..+++.      |..++.   ..-.+.+...+..|.++-      .+.+.|..+
T Consensus       545 ---------YnsLI~a~~k~G~~deA~~lf~eM~~~~~gi~PD~---vTynaLI~ay~k~G~ldeA~elf~~M~e~gi~p  612 (1060)
T PLN03218        545 ---------FNALISACGQSGAVDRAFDVLAEMKAETHPIDPDH---ITVGALMKACANAGQVDRAKEVYQMIHEYNIKG  612 (1060)
T ss_pred             ---------HHHHHHHHHHCCCHHHHHHHHHHHHHhcCCCCCcH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCC
Confidence                     23566667777876655544432      222221   112344555666666554      223333332


Q ss_pred             cccCCCCCchHHHHHhcCCCCCccccccH----HHHHHHHHcCCCCcchhhhccCCcCCchHHHH-HHHcCCcHH----H
Q 048228          247 SVTNSHGDTFLHMVVAGFRSPGFRRVDHQ----IQLMEQLVSGKIVEVKDIINVTNNNGRTALHL-AVSENIQCN----L  317 (629)
Q Consensus       247 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~----~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~-A~~~~~~~~----i  317 (629)
                      +.   .-++.|..+...         .|.    .++++.+.+.| +.    +   |..-.+.|.. .+..+ ..+    +
T Consensus       613 ~~---~tynsLI~ay~k---------~G~~deAl~lf~eM~~~G-v~----P---D~~TynsLI~a~~k~G-~~eeA~~l  671 (1060)
T PLN03218        613 TP---EVYTIAVNSCSQ---------KGDWDFALSIYDDMKKKG-VK----P---DEVFFSALVDVAGHAG-DLDKAFEI  671 (1060)
T ss_pred             Ch---HHHHHHHHHHHh---------cCCHHHHHHHHHHHHHcC-CC----C---CHHHHHHHHHHHHhCC-CHHHHHHH
Confidence            22   122333333222         233    34444444554 11    1   2222334443 34444 544    4


Q ss_pred             HHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccHHHHHH
Q 048228          318 VELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNAIACHL  381 (629)
Q Consensus       318 v~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~TpL~~A~  381 (629)
                      ++.+++ .|..++..  -..+.+...++.|..+....+.+.+.+.|..++.   .-++.|..+.
T Consensus       672 ~~eM~k-~G~~pd~~--tynsLI~ay~k~G~~eeA~~lf~eM~~~g~~Pdv---vtyN~LI~gy  729 (1060)
T PLN03218        672 LQDARK-QGIKLGTV--SYSSLMGACSNAKNWKKALELYEDIKSIKLRPTV---STMNALITAL  729 (1060)
T ss_pred             HHHHHH-cCCCCCHH--HHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCH---HHHHHHHHHH
Confidence            455555 66665543  2335566668888888777788888887776553   2344554444


No 127
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=83.30  E-value=2.3  Score=33.66  Aligned_cols=45  Identities=22%  Similarity=0.325  Sum_probs=35.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCccccCCCCchhhhhccchhHHhhhccchHHHHHHhcCCHHHHHHHHhC
Q 048228          139 ILYAAARSKNSEVFRLLLDNAVAPRCCLSSGGEFEEKLSDSYSVFKWEMMNRAVHAVARGGNLDILRQLLGD  210 (629)
Q Consensus       139 L~~AA~~~g~~~iv~~Ll~~Ga~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~~  210 (629)
                      +.+| +.+|+.||++.+++.+. ++                         ...|..|+...+.+++++|++.
T Consensus        10 l~~A-i~GGN~eII~~c~~~~~-~~-------------------------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen   10 LEYA-IIGGNFEIINICLKKNK-PD-------------------------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHH-HhCCCHHHHHHHHHHhc-cH-------------------------HHHHHHHHHHhhHHHHHHHHHh
Confidence            4555 88899999999987652 11                         2578999999999999999986


No 128
>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional
Probab=81.54  E-value=92  Score=36.09  Aligned_cols=68  Identities=13%  Similarity=0.125  Sum_probs=36.8

Q ss_pred             cCCCcccccCCCChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCH----HHHHHHHHcCCCCc
Q 048228           90 KGHNSLIRAGYGGWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNS----EVFRLLLDNAVAPR  163 (629)
Q Consensus        90 ~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~----~iv~~Ll~~Ga~~~  163 (629)
                      .|..++..  .....+..-+..|.++-+..+++.-..    +|..-++.+..+.++.|..    ++++.+++.|..++
T Consensus       152 ~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~----~~~~t~n~li~~~~~~g~~~~A~~lf~~M~~~g~~p~  223 (697)
T PLN03081        152 SGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPE----RNLASWGTIIGGLVDAGNYREAFALFREMWEDGSDAE  223 (697)
T ss_pred             hCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCC----CCeeeHHHHHHHHHHCcCHHHHHHHHHHHHHhCCCCC
Confidence            45554322  123445556677777777777765432    3444556666666666654    33344445565554


No 129
>PLN03077 Protein ECB2; Provisional
Probab=81.18  E-value=96  Score=36.93  Aligned_cols=59  Identities=14%  Similarity=0.171  Sum_probs=36.3

Q ss_pred             ChHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHH----HHHHHHHcCCCCcc
Q 048228          102 GWLLYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSE----VFRLLLDNAVAPRC  164 (629)
Q Consensus       102 ~tpLh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~----iv~~Ll~~Ga~~~~  164 (629)
                      .+.+..-+..|+++-+..+++.-.    .+|..-++.+..+.++.|..+    +++.+.+.|..|+.
T Consensus       327 n~Li~~y~k~g~~~~A~~vf~~m~----~~d~~s~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd~  389 (857)
T PLN03077        327 NSLIQMYLSLGSWGEAEKVFSRME----TKDAVSWTAMISGYEKNGLPDKALETYALMEQDNVSPDE  389 (857)
T ss_pred             HHHHHHHHhcCCHHHHHHHHhhCC----CCCeeeHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCc
Confidence            345556667788877777776532    245556677777777777654    34444456666653


No 130
>PLN03077 Protein ECB2; Provisional
Probab=73.46  E-value=82  Score=37.51  Aligned_cols=12  Identities=8%  Similarity=0.218  Sum_probs=6.1

Q ss_pred             HHHHHHcCCCCc
Q 048228          399 AEIFLYTGIENA  410 (629)
Q Consensus       399 v~~LL~~Gad~~  410 (629)
                      .+-..+.|..++
T Consensus       577 f~~M~~~g~~Pd  588 (857)
T PLN03077        577 FNRMVESGVNPD  588 (857)
T ss_pred             HHHHHHcCCCCC
Confidence            333345566655


No 131
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=44.78  E-value=1.6e+02  Score=30.15  Aligned_cols=153  Identities=11%  Similarity=0.140  Sum_probs=81.8

Q ss_pred             hhHHhhhccchHHHHHHhcCCHHHHHHHHh----CCCCcccccCCCCCcHHHHHHhcCCcce---e---cccCCCCcccc
Q 048228          180 YSVFKWEMMNRAVHAVARGGNLDILRQLLG----DCENVLAYRDVQGSTILHSASGRGQVEV---L---IAKSPSLISVT  249 (629)
Q Consensus       180 ~~~~~d~~g~t~Lh~A~~~g~~~iv~~Ll~----~gad~~~~~d~~g~TpLh~A~~~g~~~i---l---L~~~gadin~~  249 (629)
                      .....|..|+..+..+......+..+.+++    +-.++  ..+..|...+.........+.   +   +.. ...-=..
T Consensus       121 ~~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l--~~~~~G~~vvq~~l~~~~~~~~~~l~~~l~~-~~~~L~~  197 (322)
T cd07920         121 VELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVAL--STHPYGCRVIQRCLEHCSEEQREPLLEEILE-HALELVQ  197 (322)
T ss_pred             HHHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HcCccccHHHHHHHHhCCHHHHHHHHHHHHH-HHHHHhc
Confidence            344556777788877777766655554443    22233  356777777777666544322   1   111 1111234


Q ss_pred             CCCCCchHHHHHhcCCCCCccccccHHHHHHHHHcCCCCcchhhhccCCcCCchHHHHHHHcCC---cHHHHHHHhcCCC
Q 048228          250 NSHGDTFLHMVVAGFRSPGFRRVDHQIQLMEQLVSGKIVEVKDIINVTNNNGRTALHLAVSENI---QCNLVELLMTVPS  326 (629)
Q Consensus       250 d~~g~TpLh~A~~~~~~~~~~~~~~~~eivk~Ll~~g~~d~~a~in~~d~~g~TpLh~A~~~~~---~~~iv~~Ll~~~g  326 (629)
                      |..|...+..+...+..      .....+++.|..+-      .--..+..|...+..+.....   ...+++.|+. ..
T Consensus       198 d~~Gn~vvq~~l~~~~~------~~~~~i~~~l~~~~------~~l~~~k~Gs~Vve~~l~~~~~~~~~~ii~~l~~-~~  264 (322)
T cd07920         198 DQFGNYVVQHVLELGDP------DDTSRIIEKLLGNI------VQLSCHKFASNVVEKCLKHASKEERELIIDEILA-SG  264 (322)
T ss_pred             CCchhhHHHHHHhcCCH------HHHHHHHHHHHHHH------HHHHcCcchHHHHHHHHHHCCHHHHHHHHHHHhc-CC
Confidence            67788888887774211      12344555554332      123566788777777776651   2345555555 22


Q ss_pred             C-----CcccCCCCCCcHHHHHHhCCC
Q 048228          327 I-----NLNIQDGEGMTPLDLLKQHPR  348 (629)
Q Consensus       327 a-----dvn~~d~~G~TpLh~A~~~~~  348 (629)
                      .     .-=..|..|+-.+..+.....
T Consensus       265 ~~~~~l~~l~~d~~Gn~Viq~~l~~~~  291 (322)
T cd07920         265 NETSALDTLMKDQYGNYVIQTALDVAK  291 (322)
T ss_pred             CchhHHHHHhCCCcccHHHHHHHHhCC
Confidence            1     011345666666666655555


No 132
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=43.42  E-value=8.1  Score=41.74  Aligned_cols=96  Identities=13%  Similarity=0.013  Sum_probs=67.9

Q ss_pred             CCchHHHHHHHcCCcHHHHHHHhcCCCCCcccCCCCCCcHHHHHHhCCCCchHHHHHHHHHHcCCCCCCCCCCCccH---
Q 048228          300 NGRTALHLAVSENIQCNLVELLMTVPSINLNIQDGEGMTPLDLLKQHPRSASSEILIKQLISAGGISNCQDNVARNA---  376 (629)
Q Consensus       300 ~g~TpLh~A~~~~~~~~iv~~Ll~~~gadvn~~d~~G~TpLh~A~~~~~~~~~~~lv~~Ll~~Gadvn~~d~~G~Tp---  376 (629)
                      +.+|+|++|+..| ..+++.+++...-.++|-.-.+|..  |.+.........+ .+..|+..++..+.+|..|.-+   
T Consensus        57 ~qR~~~~v~~~~G-s~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e-~~~hL~~~k~~~~~tda~g~~~~~v  132 (528)
T KOG1595|consen   57 NQRRRRPVARRDG-SFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTE-RTYHLRYYKTLPCVTDARGNCVKNV  132 (528)
T ss_pred             ccccccchhhhcC-ccccccceeecchhhccccCCCCcc--cchhcccccCCcc-eeEeccccccccCccccCCCcccCc
Confidence            5679999999999 9999999998566778877777777  6665554433222 5677788999999999888765   


Q ss_pred             HHHHHHhCCCCCCCCCCCChhhHHHHHHcC
Q 048228          377 IACHLKGQGIGVSPGSSFRVPDAEIFLYTG  406 (629)
Q Consensus       377 L~~A~~~~~~~~~~~~~~~~~~v~~LL~~G  406 (629)
                      ||.|+......       .-.+++.|++.+
T Consensus       133 ~~~~~~~~~~~-------~r~~~~~l~e~~  155 (528)
T KOG1595|consen  133 LHCAFAHGPND-------LRPPVEDLLELQ  155 (528)
T ss_pred             ccccccCCccc-------cccHHHHHHhcc
Confidence            44444332111       346777777776


No 133
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=36.09  E-value=5.6  Score=43.56  Aligned_cols=44  Identities=11%  Similarity=0.110  Sum_probs=25.2

Q ss_pred             CCCCCcHHHHHHhcCCcce--ecccCCCCccccCCCCCchHHHHHh
Q 048228          219 DVQGSTILHSASGRGQVEV--LIAKSPSLISVTNSHGDTFLHMVVA  262 (629)
Q Consensus       219 d~~g~TpLh~A~~~g~~~i--lL~~~gadin~~d~~g~TpLh~A~~  262 (629)
                      -....++++..+.....+.  .++..+......+..|.|+||.+..
T Consensus       133 ~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~g~t~L~~tl~  178 (503)
T KOG0513|consen  133 KGDLNLALRILVSGDKYSGAEVLLTKYEIADAREVLGNTKLHLTLT  178 (503)
T ss_pred             ccccccceeeeecCccccceeecccccccchhhhhcCCceeeeecc
Confidence            3445566666665555544  2222555555556667777777766


No 134
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=34.63  E-value=18  Score=39.15  Aligned_cols=84  Identities=6%  Similarity=0.004  Sum_probs=61.0

Q ss_pred             CCCcHHHHHHhCCCCchHHHHHHHHHH-cCCCCCCCCCCCccHHHHHHHhCCCCCCCCCCCChhhHHHHHHcCCCCcccc
Q 048228          335 EGMTPLDLLKQHPRSASSEILIKQLIS-AGGISNCQDNVARNAIACHLKGQGIGVSPGSSFRVPDAEIFLYTGIENASDA  413 (629)
Q Consensus       335 ~G~TpLh~A~~~~~~~~~~~lv~~Ll~-~Gadvn~~d~~G~TpL~~A~~~~~~~~~~~~~~~~~~v~~LL~~Gad~~~~d  413 (629)
                      +.+|||++|+..|..+    .+...+. .-.++|-.--+|..  |+++.....+       ..|.+..|+..++..+..|
T Consensus        57 ~qR~~~~v~~~~Gs~~----~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~-------~~e~~~hL~~~k~~~~~td  123 (528)
T KOG1595|consen   57 NQRRRRPVARRDGSFN----YSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVG-------DTERTYHLRYYKTLPCVTD  123 (528)
T ss_pred             ccccccchhhhcCccc----cccceeecchhhccccCCCCcc--cchhcccccC-------CcceeEeccccccccCccc
Confidence            5789999999999998    4444443 34566666666666  5555433222       4788899999999999999


Q ss_pred             ccCCChhhhhhhhccCCC
Q 048228          414 ICDAASVEYSSCLSEQSD  431 (629)
Q Consensus       414 ~~g~t~~~~a~~~~e~g~  431 (629)
                      ..|..+.....|...++.
T Consensus       124 a~g~~~~~v~~~~~~~~~  141 (528)
T KOG1595|consen  124 ARGNCVKNVLHCAFAHGP  141 (528)
T ss_pred             cCCCcccCcccccccCCc
Confidence            999988887766666555


No 135
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=26.61  E-value=1.3e+02  Score=32.83  Aligned_cols=49  Identities=16%  Similarity=0.070  Sum_probs=25.2

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCccccCCCCCCCHHHHHHHHcCCHHHHHHHHHcC
Q 048228          105 LYTAASAGDVRFVKELLQRDPLLVFGEGEYGVTDILYAAARSKNSEVFRLLLDNA  159 (629)
Q Consensus       105 Lh~A~~~g~~~~v~~LL~~g~~~~~~~d~~g~tpL~~AA~~~g~~~iv~~Ll~~G  159 (629)
                      +.+|...|+++.+..+.+.-.      +..-|.-|--+|...|+.++++.-+.+.
T Consensus       325 FeLAl~lg~L~~A~~~a~~~~------~~~~W~~Lg~~AL~~g~~~lAe~c~~k~  373 (443)
T PF04053_consen  325 FELALQLGNLDIALEIAKELD------DPEKWKQLGDEALRQGNIELAEECYQKA  373 (443)
T ss_dssp             HHHHHHCT-HHHHHHHCCCCS------THHHHHHHHHHHHHTTBHHHHHHHHHHC
T ss_pred             hHHHHhcCCHHHHHHHHHhcC------cHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence            566666666666655554322      1112333444455666666666666553


No 136
>PF01671 ASFV_360:  African swine fever virus multigene family 360 protein;  InterPro: IPR002595 The multigene family 360 protein are found within the African swine fever virus (ASFV) genome which consist of dsDNA and has similar structural features to the poxviruses []. The biological function of this family is not known [], although Q65137 from SWISSPROT is a major structural protein [].; GO: 0042330 taxis
Probab=25.39  E-value=1e+02  Score=29.33  Aligned_cols=20  Identities=15%  Similarity=0.084  Sum_probs=11.3

Q ss_pred             HHHHcCCHHHHHHHHhcCCC
Q 048228          107 TAASAGDVRFVKELLQRDPL  126 (629)
Q Consensus       107 ~A~~~g~~~~v~~LL~~g~~  126 (629)
                      .|+..+-.+.++++-++-+.
T Consensus        91 ~Av~ynL~~AI~Yfyq~y~h  110 (215)
T PF01671_consen   91 IAVQYNLKEAIQYFYQKYPH  110 (215)
T ss_pred             HHHHhhhHHHHHHHHHhccc
Confidence            45555555666666655544


No 137
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=24.21  E-value=7.3e+02  Score=25.14  Aligned_cols=52  Identities=17%  Similarity=0.181  Sum_probs=33.6

Q ss_pred             HHhhhccchHHHHHHhcCCHHH----HHHHHhCCCCcccccCCCCCcHHHHHHhcCCc
Q 048228          182 VFKWEMMNRAVHAVARGGNLDI----LRQLLGDCENVLAYRDVQGSTILHSASGRGQV  235 (629)
Q Consensus       182 ~~~d~~g~t~Lh~A~~~g~~~i----v~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~  235 (629)
                      ...|..|+..+..+...+..+.    ++.|..+-..+  ..++.|...+..+...+..
T Consensus       195 L~~d~~Gn~vvq~~l~~~~~~~~~~i~~~l~~~~~~l--~~~k~Gs~Vve~~l~~~~~  250 (322)
T cd07920         195 LVQDQFGNYVVQHVLELGDPDDTSRIIEKLLGNIVQL--SCHKFASNVVEKCLKHASK  250 (322)
T ss_pred             HhcCCchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHH--HcCcchHHHHHHHHHHCCH
Confidence            3456778888888888876553    34443332233  3678888888888777653


No 138
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.19  E-value=24  Score=38.84  Aligned_cols=46  Identities=28%  Similarity=0.302  Sum_probs=34.0

Q ss_pred             chHHHHHHhcCCHHHHHHHHhCCCCcccccCCCCCcHHHHHHhcCCc
Q 048228          189 NRAVHAVARGGNLDILRQLLGDCENVLAYRDVQGSTILHSASGRGQV  235 (629)
Q Consensus       189 ~t~Lh~A~~~g~~~iv~~Ll~~gad~~~~~d~~g~TpLh~A~~~g~~  235 (629)
                      .++++..+.....+++..++.++..... .+..|.|+||.+...++.
T Consensus       137 ~~~~~~~~s~~~~~~~~~~l~~~~~~~~-~~~~g~t~L~~tl~~~~~  182 (503)
T KOG0513|consen  137 NLALRILVSGDKYSGAEVLLTKYEIADA-REVLGNTKLHLTLTKENL  182 (503)
T ss_pred             ccceeeeecCccccceeecccccccchh-hhhcCCceeeeeccCCCc
Confidence            4777888887888887777775554443 677888888888887665


No 139
>PF09075 STb_secrete:  Heat-stable enterotoxin B, secretory;  InterPro: IPR015160 Members of this family assume a helical secondary structure, with two alpha helices forming a disulphide cross-linked alpha-helical hairpin. The disulphide bonds are crucial for the toxic activity of the protein, and are required for maintenance of the tertiary structure, and subsequent interaction with the particulate form of guanylate cyclase, increasing cyclic GMP levels within the host intestinal epithelial cells []. ; PDB: 1EHS_A.
Probab=20.09  E-value=34  Score=22.86  Aligned_cols=6  Identities=83%  Similarity=1.608  Sum_probs=3.7

Q ss_pred             cccccc
Q 048228          599 LCFGAQ  604 (629)
Q Consensus       599 ~~~~~~  604 (629)
                      -|||||
T Consensus        35 acfgaq   40 (48)
T PF09075_consen   35 ACFGAQ   40 (48)
T ss_dssp             TTTTTH
T ss_pred             cccchh
Confidence            466665


Done!