Query 048238
Match_columns 395
No_of_seqs 159 out of 1714
Neff 9.0
Searched_HMMs 46136
Date Fri Mar 29 07:41:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048238.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048238hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02992 coniferyl-alcohol glu 100.0 2E-57 4.4E-62 448.1 37.3 357 6-381 82-470 (481)
2 PLN03015 UDP-glucosyl transfer 100.0 2.7E-57 5.9E-62 444.9 36.2 359 3-378 82-466 (470)
3 PLN02863 UDP-glucoronosyl/UDP- 100.0 5.4E-57 1.2E-61 447.3 37.1 370 3-382 89-473 (477)
4 PLN02534 UDP-glycosyltransfera 100.0 7.2E-57 1.6E-61 445.8 36.9 370 5-380 96-486 (491)
5 PLN02555 limonoid glucosyltran 100.0 9.2E-57 2E-61 444.5 37.4 371 6-386 90-475 (480)
6 PLN02410 UDP-glucoronosyl/UDP- 100.0 1E-56 2.2E-61 442.5 36.1 352 7-380 79-450 (451)
7 PLN02173 UDP-glucosyl transfer 100.0 1.3E-56 2.8E-61 440.0 36.5 357 5-379 77-447 (449)
8 PLN03007 UDP-glucosyltransfera 100.0 2.5E-56 5.5E-61 445.7 36.5 367 6-380 102-480 (482)
9 PLN00164 glucosyltransferase; 100.0 4.9E-56 1.1E-60 441.7 37.7 360 10-382 92-475 (480)
10 PLN02764 glycosyltransferase f 100.0 3.4E-56 7.4E-61 435.8 35.8 350 4-382 86-447 (453)
11 PLN02208 glycosyltransferase f 100.0 3.6E-56 7.8E-61 437.5 35.3 344 6-381 87-440 (442)
12 PLN03004 UDP-glycosyltransfera 100.0 1.7E-56 3.8E-61 439.3 32.5 348 5-369 87-450 (451)
13 PLN02207 UDP-glycosyltransfera 100.0 1.2E-55 2.6E-60 434.7 37.0 364 4-380 84-465 (468)
14 PLN02210 UDP-glucosyl transfer 100.0 1.2E-55 2.7E-60 436.2 36.8 362 6-379 82-454 (456)
15 PLN02670 transferase, transfer 100.0 1.5E-55 3.3E-60 434.4 35.6 365 6-382 90-467 (472)
16 PLN02152 indole-3-acetate beta 100.0 1.2E-55 2.6E-60 433.8 34.7 354 5-379 80-455 (455)
17 PLN02562 UDP-glycosyltransfera 100.0 1E-53 2.3E-58 422.0 36.6 356 4-378 76-447 (448)
18 PLN00414 glycosyltransferase f 100.0 7.1E-54 1.5E-58 421.7 34.8 343 6-381 87-441 (446)
19 PLN02167 UDP-glycosyltransfera 100.0 9.7E-54 2.1E-58 426.0 35.3 361 6-380 88-472 (475)
20 PLN02554 UDP-glycosyltransfera 100.0 3.2E-53 6.9E-58 422.9 34.5 338 28-380 113-478 (481)
21 PLN02448 UDP-glycosyltransfera 100.0 3.4E-52 7.3E-57 413.9 36.9 363 6-381 85-458 (459)
22 PHA03392 egt ecdysteroid UDP-g 100.0 3.3E-43 7.1E-48 352.1 22.1 321 15-382 123-468 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 1.4E-42 2.9E-47 351.3 12.8 221 125-384 226-447 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 9.3E-35 2E-39 293.8 17.0 327 27-381 114-456 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 7E-32 1.5E-36 264.9 27.4 302 12-376 78-388 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 1.5E-30 3.2E-35 256.2 16.9 180 147-357 205-386 (401)
27 COG1819 Glycosyl transferases, 100.0 2.3E-28 4.9E-33 238.9 20.7 192 149-382 211-402 (406)
28 PRK12446 undecaprenyldiphospho 99.8 7.8E-18 1.7E-22 162.4 22.0 173 151-351 154-335 (352)
29 PF13528 Glyco_trans_1_3: Glyc 99.8 1.6E-17 3.4E-22 158.4 21.5 230 13-336 81-317 (318)
30 COG0707 MurG UDP-N-acetylgluco 99.7 1.6E-15 3.4E-20 145.3 22.2 138 191-341 182-326 (357)
31 TIGR00661 MJ1255 conserved hyp 99.7 2.1E-15 4.5E-20 144.1 20.7 124 191-340 187-315 (321)
32 PF04101 Glyco_tran_28_C: Glyc 99.5 2.3E-15 5E-20 129.9 0.9 135 194-340 1-145 (167)
33 PRK13608 diacylglycerol glucos 99.5 2.1E-12 4.6E-17 126.8 21.4 146 190-351 200-351 (391)
34 PRK00726 murG undecaprenyldiph 99.5 5E-12 1.1E-16 122.6 23.0 136 191-340 182-325 (357)
35 cd03785 GT1_MurG MurG is an N- 99.5 2.5E-12 5.5E-17 124.1 20.7 138 191-340 180-325 (350)
36 PLN02605 monogalactosyldiacylg 99.5 2.5E-11 5.3E-16 118.9 27.5 136 190-339 204-347 (382)
37 PRK13609 diacylglycerol glucos 99.4 1.2E-10 2.5E-15 114.0 25.7 135 191-341 201-340 (380)
38 TIGR00215 lpxB lipid-A-disacch 99.4 6.4E-11 1.4E-15 115.9 19.8 169 190-376 189-384 (385)
39 TIGR01133 murG undecaprenyldip 99.3 3.6E-10 7.9E-15 108.9 19.1 139 191-341 178-323 (348)
40 TIGR03590 PseG pseudaminic aci 99.2 7.1E-10 1.5E-14 103.7 15.9 105 192-302 170-278 (279)
41 PRK00025 lpxB lipid-A-disaccha 99.2 2.1E-09 4.6E-14 105.0 19.1 152 191-355 185-358 (380)
42 TIGR03492 conserved hypothetic 99.1 8.5E-08 1.8E-12 94.2 24.9 136 191-340 204-365 (396)
43 PRK05749 3-deoxy-D-manno-octul 98.9 6.4E-07 1.4E-11 89.0 25.1 82 257-351 314-401 (425)
44 cd03814 GT1_like_2 This family 98.8 2.1E-06 4.5E-11 82.3 25.4 130 192-341 196-334 (364)
45 COG4671 Predicted glycosyl tra 98.8 7.7E-08 1.7E-12 89.2 14.2 137 191-340 218-366 (400)
46 TIGR00236 wecB UDP-N-acetylglu 98.8 4.7E-07 1E-11 88.1 20.6 130 192-340 197-335 (365)
47 PRK14089 ipid-A-disaccharide s 98.8 4.6E-07 1E-11 86.8 17.5 151 192-356 167-332 (347)
48 PLN02871 UDP-sulfoquinovose:DA 98.8 4.6E-06 1E-10 83.9 25.4 140 193-352 263-414 (465)
49 cd03801 GT1_YqgM_like This fam 98.6 2.5E-05 5.4E-10 74.1 24.0 252 14-341 73-343 (374)
50 cd03794 GT1_wbuB_like This fam 98.6 2.4E-05 5.1E-10 75.2 23.7 143 191-351 218-378 (394)
51 cd05844 GT1_like_7 Glycosyltra 98.6 2.6E-05 5.5E-10 75.4 23.6 131 193-341 188-338 (367)
52 cd03817 GT1_UGDG_like This fam 98.6 5E-05 1.1E-09 72.7 25.3 131 192-341 201-345 (374)
53 PRK01021 lpxB lipid-A-disaccha 98.6 2.3E-05 4.9E-10 79.3 23.1 199 136-356 370-589 (608)
54 cd03823 GT1_ExpE7_like This fa 98.5 2E-05 4.4E-10 75.1 22.0 134 191-341 189-331 (359)
55 COG1519 KdtA 3-deoxy-D-manno-o 98.5 5.1E-05 1.1E-09 72.9 23.9 266 15-356 112-404 (419)
56 cd03786 GT1_UDP-GlcNAc_2-Epime 98.5 3.3E-06 7.2E-11 81.8 16.5 132 191-340 197-338 (363)
57 PF02684 LpxB: Lipid-A-disacch 98.5 3E-05 6.5E-10 74.9 21.5 204 136-363 142-361 (373)
58 cd03798 GT1_wlbH_like This fam 98.5 0.00018 4E-09 68.4 27.1 132 192-341 201-346 (377)
59 COG3980 spsG Spore coat polysa 98.5 2.1E-05 4.6E-10 71.2 17.8 146 192-354 158-305 (318)
60 cd03808 GT1_cap1E_like This fa 98.4 9.1E-05 2E-09 70.2 22.9 136 191-341 186-331 (359)
61 cd03800 GT1_Sucrose_synthase T 98.4 0.00038 8.2E-09 67.9 26.5 135 192-341 219-370 (398)
62 cd03820 GT1_amsD_like This fam 98.4 0.00015 3.2E-09 68.4 22.6 144 192-353 177-334 (348)
63 cd04962 GT1_like_5 This family 98.4 0.00027 5.9E-09 68.3 24.7 143 192-352 196-350 (371)
64 KOG3349 Predicted glycosyltran 98.3 3.2E-06 7E-11 69.0 9.0 121 192-315 3-134 (170)
65 cd03822 GT1_ecORF704_like This 98.3 0.00033 7.2E-09 67.0 24.8 144 192-352 184-348 (366)
66 cd03818 GT1_ExpC_like This fam 98.3 0.00088 1.9E-08 65.8 27.2 84 245-341 280-368 (396)
67 cd03799 GT1_amsK_like This is 98.3 0.00035 7.6E-09 66.8 23.2 135 192-341 178-329 (355)
68 cd03795 GT1_like_4 This family 98.3 0.00018 4E-09 68.8 20.8 143 192-351 190-345 (357)
69 cd03804 GT1_wbaZ_like This fam 98.2 7.9E-05 1.7E-09 71.8 18.1 127 195-340 197-327 (351)
70 cd03811 GT1_WabH_like This fam 98.2 0.00047 1E-08 65.0 22.1 132 191-340 187-333 (353)
71 cd03816 GT1_ALG1_like This fam 98.2 0.0012 2.6E-08 65.5 25.7 142 192-353 231-399 (415)
72 cd03825 GT1_wcfI_like This fam 98.2 0.00066 1.4E-08 65.2 23.4 82 245-341 243-332 (365)
73 PF02350 Epimerase_2: UDP-N-ac 98.1 7.2E-05 1.6E-09 72.1 15.3 255 7-340 48-319 (346)
74 TIGR02149 glgA_Coryne glycogen 98.1 0.0032 6.9E-08 61.3 27.2 138 193-341 201-354 (388)
75 cd03819 GT1_WavL_like This fam 98.1 0.0018 3.9E-08 62.1 25.0 148 191-353 183-346 (355)
76 PRK10307 putative glycosyl tra 98.1 0.0045 9.7E-08 61.2 28.1 143 192-352 228-387 (412)
77 TIGR03087 stp1 sugar transfera 98.1 0.00037 8E-09 68.6 20.3 136 194-350 225-374 (397)
78 COG0763 LpxB Lipid A disacchar 98.1 0.00047 1E-08 65.7 19.5 224 126-378 137-379 (381)
79 TIGR03449 mycothiol_MshA UDP-N 98.1 0.00089 1.9E-08 65.9 22.4 145 192-351 218-381 (405)
80 TIGR02472 sucr_P_syn_N sucrose 98.1 0.0032 6.9E-08 62.9 26.5 82 245-341 316-408 (439)
81 cd04949 GT1_gtfA_like This fam 98.1 0.00054 1.2E-08 66.5 20.4 100 245-356 260-363 (372)
82 PRK09922 UDP-D-galactose:(gluc 98.1 0.00072 1.6E-08 65.5 21.1 131 193-341 180-326 (359)
83 cd03807 GT1_WbnK_like This fam 98.1 0.0038 8.1E-08 59.3 25.2 133 192-341 192-334 (365)
84 cd03821 GT1_Bme6_like This fam 98.0 0.0026 5.7E-08 60.6 23.8 144 191-352 201-359 (375)
85 cd03806 GT1_ALG11_like This fa 98.0 0.0049 1.1E-07 61.2 25.3 81 245-341 304-394 (419)
86 TIGR02918 accessory Sec system 97.9 0.0018 3.8E-08 65.7 21.6 152 193-356 319-484 (500)
87 cd03809 GT1_mtfB_like This fam 97.9 0.00058 1.3E-08 65.3 17.4 131 192-341 194-338 (365)
88 cd03805 GT1_ALG2_like This fam 97.9 0.0019 4.1E-08 63.0 21.3 144 191-351 209-377 (392)
89 TIGR03088 stp2 sugar transfera 97.9 0.008 1.7E-07 58.3 25.5 133 191-341 192-340 (374)
90 TIGR03568 NeuC_NnaA UDP-N-acet 97.9 0.0014 3.1E-08 63.8 18.9 127 191-337 200-337 (365)
91 cd03796 GT1_PIG-A_like This fa 97.9 0.0051 1.1E-07 60.5 23.0 129 192-340 192-334 (398)
92 PF00534 Glycos_transf_1: Glyc 97.9 0.0002 4.3E-09 61.4 11.5 145 191-350 13-170 (172)
93 PRK15179 Vi polysaccharide bio 97.9 0.0075 1.6E-07 63.3 24.9 82 245-339 573-659 (694)
94 cd03813 GT1_like_3 This family 97.9 0.0074 1.6E-07 61.0 24.4 135 192-341 292-444 (475)
95 PLN02949 transferase, transfer 97.8 0.009 2E-07 60.0 24.4 93 245-352 334-437 (463)
96 TIGR02468 sucrsPsyn_pln sucros 97.8 0.0073 1.6E-07 65.3 23.4 94 245-353 547-652 (1050)
97 cd03812 GT1_CapH_like This fam 97.7 0.0068 1.5E-07 58.1 21.1 131 192-341 191-333 (358)
98 cd04946 GT1_AmsK_like This fam 97.7 0.00098 2.1E-08 65.9 15.5 136 192-341 229-379 (407)
99 PF04007 DUF354: Protein of un 97.7 0.0068 1.5E-07 57.9 20.4 136 178-337 168-308 (335)
100 PRK15427 colanic acid biosynth 97.7 0.0014 3.1E-08 64.7 16.2 132 192-341 221-373 (406)
101 cd03792 GT1_Trehalose_phosphor 97.7 0.012 2.5E-07 57.3 22.3 143 192-351 189-350 (372)
102 PRK15484 lipopolysaccharide 1, 97.7 0.0034 7.3E-08 61.5 18.4 83 245-341 256-346 (380)
103 COG5017 Uncharacterized conser 97.6 0.00086 1.9E-08 54.1 10.7 109 195-315 2-123 (161)
104 PF13844 Glyco_transf_41: Glyc 97.6 0.00076 1.6E-08 66.8 11.7 153 190-357 282-446 (468)
105 PLN02275 transferase, transfer 97.5 0.033 7.1E-07 54.3 21.8 75 246-337 286-371 (371)
106 cd04951 GT1_WbdM_like This fam 97.4 0.0033 7.1E-08 60.2 14.1 129 192-340 187-327 (360)
107 cd04955 GT1_like_6 This family 97.4 0.083 1.8E-06 50.5 23.5 124 196-340 196-331 (363)
108 PLN02846 digalactosyldiacylgly 97.3 0.067 1.5E-06 53.5 21.6 74 249-340 287-364 (462)
109 COG0381 WecB UDP-N-acetylgluco 97.3 0.052 1.1E-06 52.1 19.6 138 191-351 203-350 (383)
110 PLN00142 sucrose synthase 97.2 0.15 3.3E-06 54.2 24.5 72 263-349 667-747 (815)
111 PLN02501 digalactosyldiacylgly 97.1 0.23 5E-06 51.6 23.3 76 247-340 602-682 (794)
112 TIGR02470 sucr_synth sucrose s 97.0 0.64 1.4E-05 49.4 26.9 89 246-349 619-724 (784)
113 PF13692 Glyco_trans_1_4: Glyc 96.9 0.0031 6.7E-08 51.6 6.7 124 195-339 4-135 (135)
114 COG3914 Spy Predicted O-linked 96.8 0.034 7.4E-07 55.6 14.4 133 190-334 427-573 (620)
115 cd04950 GT1_like_1 Glycosyltra 96.8 0.08 1.7E-06 51.6 17.2 126 193-340 205-341 (373)
116 cd03802 GT1_AviGT4_like This f 96.8 0.041 8.8E-07 52.1 14.4 129 194-339 172-308 (335)
117 PRK09814 beta-1,6-galactofuran 96.7 0.016 3.4E-07 55.6 11.0 96 245-357 206-317 (333)
118 PHA01633 putative glycosyl tra 96.4 0.15 3.2E-06 48.9 15.4 84 245-339 200-307 (335)
119 PRK14098 glycogen synthase; Pr 96.2 0.16 3.6E-06 51.4 15.4 131 193-337 307-449 (489)
120 cd03791 GT1_Glycogen_synthase_ 96.1 0.12 2.6E-06 52.0 13.9 135 192-338 295-441 (476)
121 KOG4626 O-linked N-acetylgluco 96.1 0.08 1.7E-06 53.4 11.6 123 190-315 756-889 (966)
122 PRK15490 Vi polysaccharide bio 95.9 0.31 6.7E-06 49.7 15.4 64 245-315 454-522 (578)
123 TIGR02095 glgA glycogen/starch 95.6 0.3 6.6E-06 49.2 14.4 135 192-338 290-436 (473)
124 PRK00654 glgA glycogen synthas 95.5 0.61 1.3E-05 46.9 16.0 135 192-338 281-427 (466)
125 PF06258 Mito_fiss_Elm1: Mitoc 94.6 1.8 3.9E-05 41.1 15.4 154 151-315 113-282 (311)
126 PRK10017 colanic acid biosynth 94.6 1.5 3.3E-05 43.5 15.4 160 180-356 224-407 (426)
127 PLN02316 synthase/transferase 94.6 2 4.4E-05 47.1 17.4 102 246-363 900-1017(1036)
128 PF13524 Glyco_trans_1_2: Glyc 94.5 0.52 1.1E-05 35.6 9.6 70 271-357 9-78 (92)
129 TIGR03713 acc_sec_asp1 accesso 93.5 0.65 1.4E-05 47.4 10.8 92 246-357 409-507 (519)
130 PHA01630 putative group 1 glyc 93.5 6.1 0.00013 37.9 16.9 39 253-293 197-242 (331)
131 PLN02939 transferase, transfer 93.4 3.2 6.9E-05 45.1 15.8 83 245-338 836-930 (977)
132 PRK10125 putative glycosyl tra 92.8 4 8.8E-05 40.3 14.9 101 208-333 256-365 (405)
133 cd01635 Glycosyltransferase_GT 92.4 0.62 1.3E-05 40.7 7.9 95 198-294 109-215 (229)
134 TIGR02919 accessory Sec system 92.3 4.7 0.0001 40.3 14.6 187 120-356 234-426 (438)
135 cd03789 GT1_LPS_heptosyltransf 89.8 1.6 3.5E-05 40.5 8.2 96 192-290 121-223 (279)
136 TIGR02400 trehalose_OtsA alpha 88.6 7.2 0.00016 39.2 12.3 103 251-378 341-454 (456)
137 PRK06718 precorrin-2 dehydroge 87.0 10 0.00022 33.5 11.1 147 191-359 10-165 (202)
138 COG1817 Uncharacterized protei 86.6 29 0.00063 32.7 14.1 43 13-57 71-113 (346)
139 TIGR02201 heptsyl_trn_III lipo 84.6 7.8 0.00017 37.1 9.9 97 191-290 180-285 (344)
140 TIGR02193 heptsyl_trn_I lipopo 84.0 4.5 9.8E-05 38.3 7.9 134 191-337 178-319 (319)
141 PF01075 Glyco_transf_9: Glyco 83.7 4.1 8.8E-05 36.9 7.2 95 191-290 104-208 (247)
142 COG0438 RfaG Glycosyltransfera 83.5 35 0.00076 31.1 16.1 131 194-340 200-343 (381)
143 PRK14099 glycogen synthase; Pr 83.3 35 0.00075 34.6 14.3 134 195-340 297-448 (485)
144 PLN03063 alpha,alpha-trehalose 82.4 8 0.00017 41.8 9.7 98 258-381 371-478 (797)
145 COG4370 Uncharacterized protei 82.3 4.2 9.1E-05 38.0 6.4 78 252-341 301-381 (412)
146 PF06722 DUF1205: Protein of u 82.2 1.5 3.3E-05 33.8 3.1 53 177-231 27-84 (97)
147 TIGR01470 cysG_Nterm siroheme 82.1 17 0.00037 32.2 10.2 150 191-359 9-165 (205)
148 PRK02797 4-alpha-L-fucosyltran 80.6 33 0.00072 32.4 11.7 131 194-337 146-292 (322)
149 PRK10422 lipopolysaccharide co 80.5 12 0.00026 36.0 9.5 97 191-290 182-287 (352)
150 PF07429 Glyco_transf_56: 4-al 80.3 57 0.0012 31.3 13.5 133 192-338 183-332 (360)
151 cd03788 GT1_TPS Trehalose-6-Ph 80.0 12 0.00026 37.6 9.6 73 250-340 345-428 (460)
152 PF06925 MGDG_synth: Monogalac 79.4 5.7 0.00012 33.8 6.2 44 12-56 75-124 (169)
153 TIGR02195 heptsyl_trn_II lipop 78.9 13 0.00029 35.3 9.2 96 191-290 173-276 (334)
154 KOG1387 Glycosyltransferase [C 78.5 65 0.0014 31.0 19.7 61 4-66 129-190 (465)
155 PF05159 Capsule_synth: Capsul 78.3 22 0.00047 32.8 10.1 77 213-292 146-226 (269)
156 PRK10916 ADP-heptose:LPS hepto 75.7 16 0.00034 35.1 8.7 97 191-290 179-286 (348)
157 cd03793 GT1_Glycogen_synthase_ 74.1 19 0.00042 37.1 9.0 81 256-340 468-553 (590)
158 PRK10964 ADP-heptose:LPS hepto 73.6 11 0.00023 35.8 6.9 136 192-338 178-321 (322)
159 TIGR02398 gluc_glyc_Psyn gluco 72.3 1.2E+02 0.0025 30.9 15.7 109 248-380 364-482 (487)
160 PF04464 Glyphos_transf: CDP-G 71.0 5.2 0.00011 38.7 4.2 129 210-358 219-353 (369)
161 KOG2941 Beta-1,4-mannosyltrans 70.0 1.1E+02 0.0023 29.6 13.2 144 190-352 252-423 (444)
162 KOG0853 Glycosyltransferase [C 68.6 59 0.0013 32.9 10.8 55 276-341 381-435 (495)
163 PF03033 Glyco_transf_28: Glyc 67.8 7.2 0.00016 31.6 3.8 33 27-59 100-132 (139)
164 COG0859 RfaF ADP-heptose:LPS h 67.0 19 0.00042 34.4 7.1 94 192-290 175-276 (334)
165 PRK02155 ppnK NAD(+)/NADH kina 66.8 38 0.00083 31.8 8.8 96 208-340 21-120 (291)
166 PRK14501 putative bifunctional 66.7 70 0.0015 34.3 11.9 112 249-381 345-463 (726)
167 TIGR00725 conserved hypothetic 64.5 37 0.00079 28.7 7.5 101 176-292 19-123 (159)
168 PRK10637 cysG siroheme synthas 62.9 45 0.00098 33.5 9.1 147 191-359 12-168 (457)
169 PRK05562 precorrin-2 dehydroge 62.6 56 0.0012 29.4 8.6 145 191-358 25-179 (223)
170 PLN02929 NADH kinase 62.2 42 0.0009 31.7 8.0 97 207-340 33-138 (301)
171 PRK14077 pnk inorganic polypho 62.0 44 0.00095 31.3 8.2 58 258-340 60-121 (287)
172 PF02826 2-Hacid_dh_C: D-isome 61.9 40 0.00087 28.9 7.5 104 191-335 36-143 (178)
173 PF00982 Glyco_transf_20: Glyc 59.7 2E+02 0.0044 29.1 13.2 107 250-379 357-473 (474)
174 COG3660 Predicted nucleoside-d 58.8 83 0.0018 29.1 8.9 97 192-290 161-271 (329)
175 PRK03359 putative electron tra 57.3 17 0.00038 33.4 4.6 42 15-57 101-148 (256)
176 PF00731 AIRC: AIR carboxylase 56.0 1.2E+02 0.0026 25.4 11.8 141 193-358 1-148 (150)
177 PRK06487 glycerate dehydrogena 55.4 48 0.001 31.5 7.4 100 191-334 148-248 (317)
178 PRK04885 ppnK inorganic polyph 55.2 23 0.00051 32.7 5.1 54 262-340 35-94 (265)
179 PRK12342 hypothetical protein; 54.7 21 0.00045 32.8 4.6 42 15-57 98-145 (254)
180 PRK06932 glycerate dehydrogena 54.3 53 0.0011 31.2 7.5 101 191-334 147-248 (314)
181 cd07039 TPP_PYR_POX Pyrimidine 52.3 1.4E+02 0.0031 25.1 10.7 28 265-292 64-97 (164)
182 KOG1111 N-acetylglucosaminyltr 51.0 1.8E+02 0.0038 28.3 10.1 82 207-290 210-301 (426)
183 COG0801 FolK 7,8-dihydro-6-hyd 49.2 40 0.00088 28.5 5.1 35 194-228 3-37 (160)
184 cd01840 SGNH_hydrolase_yrhL_li 47.8 71 0.0015 26.3 6.5 39 191-230 50-88 (150)
185 COG1052 LdhA Lactate dehydroge 47.5 92 0.002 29.8 7.9 104 191-335 146-252 (324)
186 PRK01231 ppnK inorganic polyph 46.8 1.1E+02 0.0023 28.9 8.1 55 261-340 61-119 (295)
187 PRK08410 2-hydroxyacid dehydro 46.5 81 0.0018 29.9 7.4 101 191-335 145-248 (311)
188 PLN02470 acetolactate synthase 46.2 53 0.0011 34.2 6.6 91 199-292 3-110 (585)
189 PRK04539 ppnK inorganic polyph 45.5 41 0.00089 31.7 5.2 58 258-340 64-125 (296)
190 cd01981 Pchlide_reductase_B Pc 44.8 33 0.00072 34.1 4.7 38 15-56 359-396 (430)
191 COG1737 RpiR Transcriptional r 44.7 64 0.0014 30.0 6.3 88 180-295 123-215 (281)
192 PRK02649 ppnK inorganic polyph 44.4 40 0.00088 31.9 4.9 56 260-340 66-125 (305)
193 PRK15438 erythronate-4-phospha 43.3 1.2E+02 0.0026 29.7 8.1 61 191-273 116-176 (378)
194 PRK01911 ppnK inorganic polyph 42.8 47 0.001 31.2 5.1 58 258-340 60-121 (292)
195 CHL00076 chlB photochlorophyll 42.6 39 0.00086 34.5 4.9 37 15-55 363-399 (513)
196 cd01141 TroA_d Periplasmic bin 42.5 36 0.00077 29.1 4.1 38 16-55 60-99 (186)
197 COG0052 RpsB Ribosomal protein 42.2 54 0.0012 29.8 5.1 30 28-57 157-188 (252)
198 TIGR01278 DPOR_BchB light-inde 41.8 42 0.00091 34.3 5.0 37 16-56 354-390 (511)
199 COG1422 Predicted membrane pro 41.4 80 0.0017 27.7 5.8 70 276-363 24-95 (201)
200 PRK03378 ppnK inorganic polyph 41.3 46 0.00099 31.3 4.8 58 258-340 59-120 (292)
201 cd01965 Nitrogenase_MoFe_beta_ 41.1 45 0.00097 33.2 5.0 36 15-54 360-395 (428)
202 cd07037 TPP_PYR_MenD Pyrimidin 40.8 1.4E+02 0.003 25.2 7.3 27 266-292 62-94 (162)
203 PRK03372 ppnK inorganic polyph 40.8 46 0.001 31.5 4.7 57 259-340 69-129 (306)
204 PRK02910 light-independent pro 40.7 45 0.00098 34.1 5.0 37 15-55 351-387 (519)
205 PRK07313 phosphopantothenoylcy 40.7 2.4E+02 0.0052 24.3 11.2 142 192-338 2-179 (182)
206 KOG0069 Glyoxylate/hydroxypyru 40.5 1.7E+02 0.0037 28.1 8.4 106 191-335 162-269 (336)
207 PF07355 GRDB: Glycine/sarcosi 40.2 54 0.0012 31.4 5.0 48 9-57 63-120 (349)
208 PRK15409 bifunctional glyoxyla 40.2 1E+02 0.0022 29.4 7.1 66 191-275 145-211 (323)
209 PF10820 DUF2543: Protein of u 39.5 86 0.0019 22.4 4.6 42 331-382 38-79 (81)
210 cd03466 Nitrogenase_NifN_2 Nit 39.2 50 0.0011 32.8 5.0 36 15-54 361-396 (429)
211 PF13477 Glyco_trans_4_2: Glyc 38.4 63 0.0014 25.8 4.8 39 17-56 65-107 (139)
212 cd03412 CbiK_N Anaerobic cobal 38.0 53 0.0012 26.5 4.1 38 192-229 1-40 (127)
213 cd07038 TPP_PYR_PDC_IPDC_like 37.8 2.5E+02 0.0053 23.6 10.6 28 265-292 60-93 (162)
214 PLN03064 alpha,alpha-trehalose 37.7 6.1E+02 0.013 28.2 13.5 104 253-381 447-562 (934)
215 PRK05579 bifunctional phosphop 36.9 4.2E+02 0.0092 26.1 11.3 142 191-338 6-182 (399)
216 TIGR00730 conserved hypothetic 36.9 1.7E+02 0.0037 25.2 7.3 98 177-291 21-133 (178)
217 cd03784 GT1_Gtf_like This fami 36.6 1.7E+02 0.0037 28.3 8.3 37 193-231 2-38 (401)
218 PRK01185 ppnK inorganic polyph 36.3 59 0.0013 30.2 4.6 54 262-340 52-106 (271)
219 cd01976 Nitrogenase_MoFe_alpha 36.1 44 0.00095 33.2 4.0 37 15-55 358-394 (421)
220 PRK09219 xanthine phosphoribos 36.0 89 0.0019 27.3 5.4 42 14-56 38-81 (189)
221 PF06180 CbiK: Cobalt chelatas 35.7 47 0.001 30.6 3.8 39 193-231 2-43 (262)
222 PRK03501 ppnK inorganic polyph 35.5 71 0.0015 29.5 5.0 55 262-340 39-98 (264)
223 PF06506 PrpR_N: Propionate ca 35.5 37 0.00081 29.1 3.0 32 262-294 32-63 (176)
224 COG3200 AroG 3-deoxy-D-arabino 35.3 94 0.002 29.8 5.6 54 176-231 295-351 (445)
225 PRK08155 acetolactate synthase 35.1 1.2E+02 0.0025 31.4 7.1 27 265-291 77-109 (564)
226 TIGR01285 nifN nitrogenase mol 34.8 53 0.0012 32.7 4.4 35 16-54 363-397 (432)
227 cd01974 Nitrogenase_MoFe_beta 34.1 71 0.0015 31.9 5.1 38 14-55 365-402 (435)
228 PRK15062 hydrogenase isoenzyme 34.0 1.4E+02 0.0031 28.8 6.8 46 178-226 119-164 (364)
229 PRK14075 pnk inorganic polypho 33.8 73 0.0016 29.3 4.8 54 262-340 41-95 (256)
230 PRK06436 glycerate dehydrogena 33.6 2.1E+02 0.0044 27.1 7.9 64 191-276 122-185 (303)
231 PF02776 TPP_enzyme_N: Thiamin 33.4 1.6E+02 0.0035 24.9 6.6 27 266-292 66-98 (172)
232 PRK00923 sirohydrochlorin coba 33.1 2.5E+02 0.0054 22.3 7.7 28 192-219 2-29 (126)
233 PLN02935 Bifunctional NADH kin 32.7 77 0.0017 32.1 5.0 54 261-340 261-319 (508)
234 PF05728 UPF0227: Uncharacteri 32.6 1E+02 0.0022 26.8 5.3 44 15-59 46-92 (187)
235 TIGR01286 nifK nitrogenase mol 32.3 75 0.0016 32.5 5.0 37 14-54 425-461 (515)
236 TIGR01917 gly_red_sel_B glycin 32.2 84 0.0018 31.0 5.0 46 11-57 61-116 (431)
237 TIGR01918 various_sel_PB selen 32.2 85 0.0019 31.0 5.1 46 11-57 61-116 (431)
238 PRK02231 ppnK inorganic polyph 31.8 96 0.0021 28.8 5.2 58 256-338 36-97 (272)
239 cd01143 YvrC Periplasmic bindi 31.7 73 0.0016 27.2 4.3 39 16-56 51-90 (195)
240 TIGR00661 MJ1255 conserved hyp 31.3 3.6E+02 0.0078 25.3 9.3 27 262-290 93-119 (321)
241 cd07035 TPP_PYR_POX_like Pyrim 31.1 2.2E+02 0.0048 23.3 7.0 27 266-292 61-93 (155)
242 cd01147 HemV-2 Metal binding p 30.8 69 0.0015 28.9 4.2 40 16-57 65-107 (262)
243 COG0503 Apt Adenine/guanine ph 30.6 1.2E+02 0.0025 26.2 5.3 37 17-54 44-82 (179)
244 PRK12595 bifunctional 3-deoxy- 30.6 5.1E+02 0.011 25.1 10.9 128 195-338 120-250 (360)
245 PF13579 Glyco_trans_4_4: Glyc 30.3 43 0.00094 26.9 2.5 41 15-56 60-104 (160)
246 PF01497 Peripla_BP_2: Peripla 30.2 65 0.0014 28.5 3.8 40 17-58 52-93 (238)
247 PRK13243 glyoxylate reductase; 30.0 2E+02 0.0044 27.4 7.4 67 191-276 150-216 (333)
248 cd01018 ZntC Metal binding pro 29.3 1.8E+02 0.0038 26.7 6.6 43 15-58 206-250 (266)
249 PRK03708 ppnK inorganic polyph 29.2 78 0.0017 29.5 4.2 29 262-292 57-88 (277)
250 cd07025 Peptidase_S66 LD-Carbo 29.1 1.2E+02 0.0027 28.1 5.6 76 203-293 44-121 (282)
251 PRK15469 ghrA bifunctional gly 28.9 3.4E+02 0.0074 25.7 8.6 66 191-276 136-202 (312)
252 PRK00257 erythronate-4-phospha 28.9 2.8E+02 0.006 27.2 8.1 63 191-275 116-178 (381)
253 COG0496 SurE Predicted acid ph 28.8 66 0.0014 29.4 3.5 41 16-57 73-126 (252)
254 smart00851 MGS MGS-like domain 28.2 1.1E+02 0.0025 22.6 4.3 36 16-52 45-89 (90)
255 COG2159 Predicted metal-depend 28.1 2.9E+02 0.0063 25.9 7.9 91 177-280 115-210 (293)
256 COG3195 Uncharacterized protei 28.1 3.1E+02 0.0067 23.4 7.0 96 255-357 64-164 (176)
257 cd06330 PBP1_Arsenic_SBP_like 27.7 5.1E+02 0.011 24.2 11.4 12 176-187 184-195 (346)
258 PRK07449 2-succinyl-5-enolpyru 27.4 1.8E+02 0.0039 30.0 7.0 82 208-292 10-106 (568)
259 PRK05282 (alpha)-aspartyl dipe 27.4 4.5E+02 0.0097 23.8 8.6 45 179-227 23-67 (233)
260 PRK14478 nitrogenase molybdenu 27.0 72 0.0016 32.3 3.8 34 15-52 382-415 (475)
261 PRK07574 formate dehydrogenase 26.9 2.4E+02 0.0051 27.7 7.2 71 191-278 192-262 (385)
262 PLN02293 adenine phosphoribosy 26.8 1.7E+02 0.0037 25.4 5.7 42 12-54 48-91 (187)
263 cd01424 MGS_CPS_II Methylglyox 26.7 1.3E+02 0.0029 23.2 4.6 38 15-53 56-100 (110)
264 PLN02928 oxidoreductase family 26.6 3E+02 0.0065 26.5 7.9 76 191-275 159-237 (347)
265 PF01995 DUF128: Domain of unk 26.2 2.3E+02 0.0049 25.8 6.4 81 191-292 144-224 (236)
266 PF08660 Alg14: Oligosaccharid 26.0 2.3E+02 0.005 24.2 6.2 44 11-56 78-129 (170)
267 PRK06270 homoserine dehydrogen 25.6 6E+02 0.013 24.3 9.7 59 255-314 80-150 (341)
268 PRK08322 acetolactate synthase 25.5 1.5E+02 0.0033 30.4 6.0 27 265-291 64-96 (547)
269 PRK14571 D-alanyl-alanine synt 25.4 2.9E+02 0.0062 25.7 7.4 34 195-228 3-39 (299)
270 PF05693 Glycogen_syn: Glycoge 25.2 94 0.002 32.3 4.2 94 255-356 462-566 (633)
271 PRK13982 bifunctional SbtC-lik 25.2 7.3E+02 0.016 25.2 12.8 141 191-337 70-246 (475)
272 KOG1344 Predicted histone deac 24.9 2.1E+02 0.0046 25.8 5.8 47 12-59 234-302 (324)
273 TIGR00173 menD 2-succinyl-5-en 24.7 5.9E+02 0.013 25.2 9.8 26 265-290 64-95 (432)
274 PF12689 Acid_PPase: Acid Phos 24.5 1.3E+02 0.0029 25.7 4.5 47 282-335 119-165 (169)
275 PF04493 Endonuclease_5: Endon 24.5 1.1E+02 0.0024 27.1 4.1 42 15-56 76-125 (206)
276 PRK11790 D-3-phosphoglycerate 24.4 3E+02 0.0066 27.2 7.6 64 191-275 151-214 (409)
277 PF09547 Spore_IV_A: Stage IV 24.3 4.7E+02 0.01 26.2 8.5 74 259-337 141-233 (492)
278 PRK14076 pnk inorganic polypho 24.2 1.1E+02 0.0023 31.9 4.5 54 262-340 348-405 (569)
279 PLN02757 sirohydrochlorine fer 24.2 4.3E+02 0.0092 22.1 7.8 29 191-219 13-41 (154)
280 PRK00039 ruvC Holliday junctio 24.2 1.5E+02 0.0033 25.1 4.8 48 10-58 45-107 (164)
281 cd01980 Chlide_reductase_Y Chl 24.1 1.2E+02 0.0026 30.1 4.7 33 19-55 343-375 (416)
282 PF03033 Glyco_transf_28: Glyc 24.1 1.5E+02 0.0034 23.5 4.8 35 194-230 1-35 (139)
283 COG0111 SerA Phosphoglycerate 24.0 3.7E+02 0.0079 25.7 7.8 104 191-335 142-249 (324)
284 PLN03139 formate dehydrogenase 23.9 3.3E+02 0.0071 26.8 7.6 68 191-275 199-266 (386)
285 PRK05340 UDP-2,3-diacylglucosa 23.8 1.7E+02 0.0037 26.3 5.4 90 177-274 19-117 (241)
286 TIGR01918 various_sel_PB selen 23.6 2.8E+02 0.0061 27.5 6.9 50 12-62 322-378 (431)
287 TIGR01744 XPRTase xanthine pho 23.6 1.9E+02 0.0041 25.2 5.4 40 15-55 39-80 (191)
288 PF10093 DUF2331: Uncharacteri 23.6 2.2E+02 0.0047 27.8 6.2 82 206-292 193-290 (374)
289 TIGR01862 N2-ase-Ialpha nitrog 23.5 83 0.0018 31.5 3.5 36 15-54 376-411 (443)
290 cd06559 Endonuclease_V Endonuc 23.5 81 0.0018 28.0 3.0 40 16-55 81-128 (208)
291 TIGR02836 spore_IV_A stage IV 23.4 3.2E+02 0.0069 27.4 7.2 75 257-337 138-233 (492)
292 COG2086 FixA Electron transfer 23.4 1.3E+02 0.0029 27.7 4.5 41 15-56 100-146 (260)
293 PRK04940 hypothetical protein; 23.4 2.3E+02 0.005 24.5 5.7 31 27-57 60-91 (180)
294 COG1938 Archaeal enzymes of AT 23.4 5.7E+02 0.012 23.3 11.0 23 268-290 153-175 (244)
295 TIGR01162 purE phosphoribosyla 23.3 4.6E+02 0.0099 22.1 12.1 135 197-359 3-147 (156)
296 TIGR02015 BchY chlorophyllide 23.3 86 0.0019 31.2 3.5 32 20-55 349-380 (422)
297 cd01423 MGS_CPS_I_III Methylgl 23.1 86 0.0019 24.6 2.9 36 16-52 61-105 (116)
298 TIGR01860 VNFD nitrogenase van 23.0 92 0.002 31.4 3.7 32 17-52 388-419 (461)
299 PRK15411 rcsA colanic acid cap 23.0 1.5E+02 0.0033 26.0 4.7 41 17-58 38-87 (207)
300 cd07062 Peptidase_S66_mccF_lik 22.8 1.8E+02 0.0039 27.4 5.5 74 204-292 49-124 (308)
301 TIGR01284 alt_nitrog_alph nitr 22.7 75 0.0016 31.9 3.0 36 15-54 384-419 (457)
302 PF05225 HTH_psq: helix-turn-h 22.6 1.4E+02 0.0031 19.1 3.3 26 325-352 1-26 (45)
303 PRK06456 acetolactate synthase 22.4 1.7E+02 0.0036 30.3 5.6 26 266-291 70-101 (572)
304 PRK08527 acetolactate synthase 22.2 2.2E+02 0.0048 29.3 6.5 27 265-291 67-99 (563)
305 TIGR01283 nifE nitrogenase mol 22.2 1.2E+02 0.0027 30.4 4.4 36 15-54 384-419 (456)
306 cd03818 GT1_ExpC_like This fam 22.1 2.8E+02 0.0061 26.8 6.9 24 208-231 11-34 (396)
307 TIGR03609 S_layer_CsaB polysac 22.1 6E+02 0.013 23.4 8.9 97 192-291 172-276 (298)
308 PRK00048 dihydrodipicolinate r 21.9 6.1E+02 0.013 23.1 10.6 104 194-315 4-115 (257)
309 cd03415 CbiX_CbiC Archaeal sir 21.8 4.3E+02 0.0092 21.3 9.4 34 193-226 2-36 (125)
310 cd01715 ETF_alpha The electron 21.8 1.9E+02 0.0041 24.3 5.0 43 14-57 71-116 (168)
311 PRK08558 adenine phosphoribosy 21.7 1.9E+02 0.0042 26.2 5.2 28 27-54 111-140 (238)
312 COG3947 Response regulator con 21.7 1.5E+02 0.0032 28.0 4.3 43 19-62 37-86 (361)
313 PRK06276 acetolactate synthase 21.6 2E+02 0.0043 29.9 6.0 27 265-291 64-96 (586)
314 TIGR00521 coaBC_dfp phosphopan 21.3 7.9E+02 0.017 24.1 11.5 142 191-338 3-178 (390)
315 cd03409 Chelatase_Class_II Cla 21.1 3.5E+02 0.0077 20.0 6.8 36 193-228 1-39 (101)
316 PF08030 NAD_binding_6: Ferric 21.1 87 0.0019 25.7 2.7 39 193-231 3-46 (156)
317 PRK13810 orotate phosphoribosy 20.9 2.5E+02 0.0053 24.4 5.5 38 16-54 63-102 (187)
318 PF01012 ETF: Electron transfe 20.9 1.3E+02 0.0028 25.2 3.7 42 14-56 78-122 (164)
319 cd01977 Nitrogenase_VFe_alpha 20.8 92 0.002 30.8 3.2 34 17-54 349-382 (415)
320 PRK11557 putative DNA-binding 20.8 2.4E+02 0.0052 25.9 5.8 34 259-292 172-210 (278)
321 PRK02645 ppnK inorganic polyph 20.8 2.4E+02 0.0052 26.6 5.9 30 261-292 56-89 (305)
322 PRK00994 F420-dependent methyl 20.7 1.3E+02 0.0029 27.2 3.7 39 16-55 50-94 (277)
323 PRK06882 acetolactate synthase 20.5 2.4E+02 0.0051 29.2 6.3 27 265-291 68-100 (574)
324 TIGR01917 gly_red_sel_B glycin 20.5 3.3E+02 0.0071 27.0 6.6 50 12-62 322-378 (431)
325 PRK13931 stationary phase surv 20.4 1.6E+02 0.0034 27.2 4.4 37 18-55 79-128 (261)
326 cd01968 Nitrogenase_NifE_I Nit 20.4 1.2E+02 0.0025 30.0 3.8 36 15-54 345-380 (410)
327 cd03146 GAT1_Peptidase_E Type 20.4 5.9E+02 0.013 22.3 8.7 50 176-227 16-66 (212)
328 TIGR01743 purR_Bsub pur operon 20.3 2.4E+02 0.0051 26.2 5.5 35 20-55 122-158 (268)
329 TIGR02720 pyruv_oxi_spxB pyruv 20.2 2.3E+02 0.0049 29.4 6.0 28 265-292 64-97 (575)
330 PRK07710 acetolactate synthase 20.2 3.3E+02 0.0072 28.1 7.3 27 265-291 79-111 (571)
331 PF03641 Lysine_decarbox: Poss 20.1 1.2E+02 0.0026 24.6 3.2 36 256-291 46-91 (133)
332 PRK03379 vitamin B12-transport 20.0 1.7E+02 0.0037 26.7 4.6 40 16-57 63-104 (260)
No 1
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=2e-57 Score=448.13 Aligned_cols=357 Identities=29% Similarity=0.514 Sum_probs=292.0
Q ss_pred HHHHHHHhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc-CCCCCCCC-CC
Q 048238 6 PFTRATKLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANR-SLSGVQSD-DE 82 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~-p~~~~~~~-~~ 82 (395)
.+..++..+.+.++++|++. .+|+|||+|++++|+.++|+++|||+++|++++++.++.+.+.+... +....... ..
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02992 82 KIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQRK 161 (481)
T ss_pred HHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCCC
Confidence 44555677889999999874 47899999999999999999999999999999998877655443211 11000001 12
Q ss_pred ccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhh------cCCccccc
Q 048238 83 LVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRV------VKPKSWCV 156 (395)
Q Consensus 83 ~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~------~~~~~~~v 156 (395)
+..+|++|. ++..+++..+... .......+.+......+++++++|||++||++++++++.. ..++++.|
T Consensus 162 ~~~iPg~~~--l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~V 237 (481)
T PLN02992 162 PLAMPGCEP--VRFEDTLDAYLVP--DEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPI 237 (481)
T ss_pred CcccCCCCc--cCHHHhhHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEe
Confidence 445778876 6667777544322 1223445555666677899999999999999999887642 12579999
Q ss_pred CCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC-----
Q 048238 157 GPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA----- 231 (395)
Q Consensus 157 Gpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~----- 231 (395)
||++..... ...+.+|.+|||++ ++++||||||||...++.+++.+++.+|+..+++|||++++.
T Consensus 238 GPl~~~~~~--------~~~~~~c~~wLd~~--~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~ 307 (481)
T PLN02992 238 GPLCRPIQS--------SKTDHPVLDWLNKQ--PNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSA 307 (481)
T ss_pred cCccCCcCC--------CcchHHHHHHHHcC--CCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCccccc
Confidence 999864221 12456799999998 889999999999999999999999999999999999999631
Q ss_pred -------------C---CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCc
Q 048238 232 -------------E---SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMAD 295 (395)
Q Consensus 232 -------------~---~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~D 295 (395)
+ ..+|++|.+|.++.|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~D 387 (481)
T PLN02992 308 CSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAE 387 (481)
T ss_pred ccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecCccch
Confidence 0 137889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhh--hCCCchHHHHHH
Q 048238 296 QPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAME--EEKGSSWRCLDM 373 (395)
Q Consensus 296 Q~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~--~~~g~~~~~~~~ 373 (395)
|+.||+++++.||+|+.++.. ++.++.++|.++|+++|.+++|+.+|++++++++.+++|+. +| |||++++++
T Consensus 388 Q~~na~~~~~~~g~gv~~~~~----~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~Av~~~~G-GSS~~~l~~ 462 (481)
T PLN02992 388 QNMNAALLSDELGIAVRSDDP----KEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMSLSIDGG-GVAHESLCR 462 (481)
T ss_pred hHHHHHHHHHHhCeeEEecCC----CCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhcCCCC-CchHHHHHH
Confidence 999999997677999999741 13589999999999999988888999999999999999994 59 999999999
Q ss_pred HHHHHHHh
Q 048238 374 LLDETCKY 381 (395)
Q Consensus 374 l~~~~~~~ 381 (395)
|++++.+.
T Consensus 463 ~v~~~~~~ 470 (481)
T PLN02992 463 VTKECQRF 470 (481)
T ss_pred HHHHHHHH
Confidence 99998774
No 2
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=2.7e-57 Score=444.86 Aligned_cols=359 Identities=30% Similarity=0.494 Sum_probs=291.1
Q ss_pred chhHHHHHHHhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCC-cEEEecchHHHHHHHHhhhhcc-CCCCCCC
Q 048238 3 LYVPFTRATKLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFP-RFVFYGMNNYVMCVSSSVGANR-SLSGVQS 79 (395)
Q Consensus 3 ~~~~~~~a~~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP-~i~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 79 (395)
....++.+++.+.++++++|++. .+++|||+|.+++|+.++|+++||| .++|++++++....+.+++... +......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~~~~~~~~~ 161 (470)
T PLN03015 82 IFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLDTVVEGEYV 161 (470)
T ss_pred HHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhhcccccccC
Confidence 34467778888999999999975 3689999999999999999999999 5888888887765555443211 1100000
Q ss_pred C-CCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhc------CCc
Q 048238 80 D-DELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVV------KPK 152 (395)
Q Consensus 80 ~-~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~------~~~ 152 (395)
. .++..+||+|. ++..+++..+.... ...+.. +.+......+++++++|||++||+.+++.++..+ .++
T Consensus 162 ~~~~~~~vPg~p~--l~~~dlp~~~~~~~-~~~~~~-~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~ 237 (470)
T PLN03015 162 DIKEPLKIPGCKP--VGPKELMETMLDRS-DQQYKE-CVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVP 237 (470)
T ss_pred CCCCeeeCCCCCC--CChHHCCHhhcCCC-cHHHHH-HHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCc
Confidence 1 12456788876 77788876554321 111233 3345556788999999999999999999887642 256
Q ss_pred ccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC-
Q 048238 153 SWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA- 231 (395)
Q Consensus 153 ~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~- 231 (395)
++.|||++..... ...+.+|.+|||++ ++++||||||||...++.+++.+++.+|+..+++|+|+++.+
T Consensus 238 v~~VGPl~~~~~~--------~~~~~~~~~WLd~~--~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~ 307 (470)
T PLN03015 238 VYPIGPIVRTNVH--------VEKRNSIFEWLDKQ--GERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPA 307 (470)
T ss_pred eEEecCCCCCccc--------ccchHHHHHHHHhC--CCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCc
Confidence 9999999843211 11245799999998 889999999999999999999999999999999999999632
Q ss_pred -------------CCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhH
Q 048238 232 -------------ESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPL 298 (395)
Q Consensus 232 -------------~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~ 298 (395)
...+|++|.+|.++.++++.+|+||.++|+|+++++|||||||||++|++++|||||++|+++||+.
T Consensus 308 ~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P~~~DQ~~ 387 (470)
T PLN03015 308 SYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWM 387 (470)
T ss_pred cccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecccccchHH
Confidence 1137889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHH
Q 048238 299 NARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG--EKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLD 376 (395)
Q Consensus 299 na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~ 376 (395)
||+++++.||+|+.+... ...+.++.++|+++|+++|.+ ++|+.+|+||++|++++++|+++| |||++++++|++
T Consensus 388 na~~~~~~~gvg~~~~~~--~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~eG-GSS~~nl~~~~~ 464 (470)
T PLN03015 388 NATLLTEEIGVAVRTSEL--PSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWSHG-GSSYNSLFEWAK 464 (470)
T ss_pred HHHHHHHHhCeeEEeccc--ccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHH
Confidence 999998999999999520 112468999999999999963 568999999999999999999999 999999999998
Q ss_pred HH
Q 048238 377 ET 378 (395)
Q Consensus 377 ~~ 378 (395)
++
T Consensus 465 ~~ 466 (470)
T PLN03015 465 RC 466 (470)
T ss_pred hc
Confidence 75
No 3
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=5.4e-57 Score=447.32 Aligned_cols=370 Identities=32% Similarity=0.530 Sum_probs=298.6
Q ss_pred chhHHHHHHHhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCC-CCCC
Q 048238 3 LYVPFTRATKLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSG-VQSD 80 (395)
Q Consensus 3 ~~~~~~~a~~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~-~~~~ 80 (395)
.+..++.++..+.+++.++|++. .+++|||+|.+++|+.++|+++|||+++|++++++.++.+.++....+... ....
T Consensus 89 ~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~ 168 (477)
T PLN02863 89 GFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQ 168 (477)
T ss_pred hHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccccccccc
Confidence 34567788888899999999874 368999999999999999999999999999999999988887654433210 0001
Q ss_pred CCc---cCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcC-Cccccc
Q 048238 81 DEL---VTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVK-PKSWCV 156 (395)
Q Consensus 81 ~~~---~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~-~~~~~v 156 (395)
.++ ..+||++. ++.++++.++............+.+.......++++++|||++||++++++++..+. ++++.|
T Consensus 169 ~~~~~~~~iPg~~~--~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~I 246 (477)
T PLN02863 169 NEILSFSKIPNCPK--YPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAV 246 (477)
T ss_pred ccccccCCCCCCCC--cChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEe
Confidence 112 24677766 778888876653322223444444555555678889999999999999999987654 689999
Q ss_pred CCCcccCCCCC--CCCC-CCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC-
Q 048238 157 GPLCLAELSPK--NEEP-KNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE- 232 (395)
Q Consensus 157 Gpl~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~- 232 (395)
||+++...... ...+ .....+++|.+|||++ ++++||||||||+...+.+++.+++.+|+..+++|||+++...
T Consensus 247 GPL~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~--~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~ 324 (477)
T PLN02863 247 GPILPLSGEKSGLMERGGPSSVSVDDVMTWLDTC--EDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVN 324 (477)
T ss_pred CCCcccccccccccccCCcccccHHHHHHHHhcC--CCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcc
Confidence 99985432100 0011 1111356899999998 8889999999999999999999999999999999999998531
Q ss_pred -----CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhh
Q 048238 233 -----SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEI 307 (395)
Q Consensus 233 -----~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~l 307 (395)
..+|++|.++.++.|+++.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+++++.|
T Consensus 325 ~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~ 404 (477)
T PLN02863 325 EESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDEL 404 (477)
T ss_pred cccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhh
Confidence 247889999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred ceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 308 KVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 308 g~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
|+|+.+.. +..+..+.+++.++|+++|.+ +++||+||+++++++++|+.++ |||++++++|++++...+
T Consensus 405 gvG~~~~~---~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~a~~Av~~g-GSS~~~l~~~v~~i~~~~ 473 (477)
T PLN02863 405 KVAVRVCE---GADTVPDSDELARVFMESVSE--NQVERERAKELRRAALDAIKER-GSSVKDLDGFVKHVVELG 473 (477)
T ss_pred ceeEEecc---CCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHhc
Confidence 99999953 112356899999999999942 3499999999999999999999 999999999999998653
No 4
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=7.2e-57 Score=445.85 Aligned_cols=370 Identities=37% Similarity=0.652 Sum_probs=294.1
Q ss_pred hHHHHHHHhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCc
Q 048238 5 VPFTRATKLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDEL 83 (395)
Q Consensus 5 ~~~~~a~~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 83 (395)
..+..++..+.+.+.++|++. .+++|||+|.+++|+.++|+++|||+++|++++++....+..+....+.........+
T Consensus 96 ~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~ 175 (491)
T PLN02534 96 RKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSVSSDSEP 175 (491)
T ss_pred HHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccCCCCCce
Confidence 355566677889999999863 3789999999999999999999999999999999887766544333222100111225
Q ss_pred cCCCCCCC-CCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCccc
Q 048238 84 VTPPEFPW-IKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLA 162 (395)
Q Consensus 84 ~~~p~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~ 162 (395)
+.+|++|. ..++..+++.++... .....+..........++++++|||++||+++++.++..++++++.|||++..
T Consensus 176 ~~iPg~p~~~~l~~~dlp~~~~~~---~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~ 252 (491)
T PLN02534 176 FVVPGMPQSIEITRAQLPGAFVSL---PDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLC 252 (491)
T ss_pred eecCCCCccccccHHHCChhhcCc---ccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECccccc
Confidence 66888875 557777887654321 11333333333334467899999999999999999987666789999999753
Q ss_pred CCCCC-C-CCCCC-CCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC------C
Q 048238 163 ELSPK-N-EEPKN-ELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE------S 233 (395)
Q Consensus 163 ~~~~~-~-~~~~~-~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~ 233 (395)
..... . .++.. ...+.+|.+|||++ ++++||||||||......+++.+++.+|+..+++|+|+++... .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~cl~wLd~~--~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~ 330 (491)
T PLN02534 253 NKRNLDKFERGNKASIDETQCLEWLDSM--KPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEE 330 (491)
T ss_pred ccccccccccCCccccchHHHHHHHhcC--CCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhh
Confidence 21100 0 00100 11235799999999 8899999999999999999999999999999999999998421 1
Q ss_pred -ccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEE
Q 048238 234 -ELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALR 312 (395)
Q Consensus 234 -~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~ 312 (395)
.+|++|.++..+.|+++.+|+||.++|+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.
T Consensus 331 ~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~ 410 (491)
T PLN02534 331 WLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVR 410 (491)
T ss_pred hcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEE
Confidence 2578999888889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeccC---CC-Cc--C-ccCHHHHHHHHHHHhC--CChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 313 VETCD---GS-VR--G-FVKWQGLEKTVRELMG--GEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 313 ~~~~~---~~-~~--~-~~~~~~l~~~i~~~l~--~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
+.... ++ .+ + .+++++|.++|+++|. +++|+.+|+||++|++++++++.+| |||++++++||+++..
T Consensus 411 ~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~a~~Av~~G-GSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 411 VGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVMARKAMELG-GSSHINLSILIQDVLK 486 (491)
T ss_pred ecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHH
Confidence 85211 11 11 1 4899999999999997 5668899999999999999999999 9999999999999963
No 5
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=9.2e-57 Score=444.49 Aligned_cols=371 Identities=23% Similarity=0.405 Sum_probs=295.4
Q ss_pred HHHHHH-HhcHHHHHHHHhcC---CC-ccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc-CCCCCCC
Q 048238 6 PFTRAT-KLMQPHFERALESL---PH-VSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANR-SLSGVQS 79 (395)
Q Consensus 6 ~~~~a~-~~~~~~l~~~l~~~---~k-pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 79 (395)
.++.++ ..+.++++++|++. .+ ++|||+|.++.|+.++|+++|||.++|++++++.++.+.+..... +.. ...
T Consensus 90 ~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~-~~~ 168 (480)
T PLN02555 90 LYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFP-TET 168 (480)
T ss_pred HHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCcc-ccc
Confidence 455666 46788999998853 13 499999999999999999999999999999999888877653321 211 111
Q ss_pred C-CCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCC
Q 048238 80 D-DELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGP 158 (395)
Q Consensus 80 ~-~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGp 158 (395)
. ..++.+||+|. ++.++++.++..........+.+.+......+++++++|||++||+++++.++... + ++.|||
T Consensus 169 ~~~~~~~iPglp~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~-~-v~~iGP 244 (480)
T PLN02555 169 EPEIDVQLPCMPL--LKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLC-P-IKPVGP 244 (480)
T ss_pred CCCceeecCCCCC--cCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCC-C-EEEeCc
Confidence 1 12456888887 77888887764322222334445555666778999999999999999998887643 4 999999
Q ss_pred CcccCCCCCCCC-CCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC------
Q 048238 159 LCLAELSPKNEE-PKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA------ 231 (395)
Q Consensus 159 l~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~------ 231 (395)
++.......... +.....+.+|.+|||++ ++++||||||||+..++.+++.+++.+|+..+++|||+++..
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~wLd~~--~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~ 322 (480)
T PLN02555 245 LFKMAKTPNSDVKGDISKPADDCIEWLDSK--PPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGV 322 (480)
T ss_pred ccCccccccccccccccccchhHHHHHhCC--CCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccc
Confidence 986422100011 11123457899999999 778999999999999999999999999999999999998742
Q ss_pred -CCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceE
Q 048238 232 -ESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVA 310 (395)
Q Consensus 232 -~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g 310 (395)
...+|+++.++.. .|..+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|
T Consensus 323 ~~~~lp~~~~~~~~-~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG 401 (480)
T PLN02555 323 EPHVLPEEFLEKAG-DKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTG 401 (480)
T ss_pred hhhcCChhhhhhcC-CceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCce
Confidence 1137778877764 45566799999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhhhhhc
Q 048238 311 LRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYEQQLH 386 (395)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~~~ 386 (395)
+.+.... ...+.++.++|.++|+++|.+++|+.+|+||++|++++++|+.++ |||++++++||+++......+-
T Consensus 402 v~l~~~~-~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~eg-GSS~~~l~~~v~~i~~~~~~~~ 475 (480)
T PLN02555 402 VRLCRGE-AENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEG-GSSDRNFQEFVDKLVRKSVEIV 475 (480)
T ss_pred EEccCCc-cccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHhccceec
Confidence 9995210 012468999999999999988889999999999999999999999 9999999999999988744443
No 6
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1e-56 Score=442.47 Aligned_cols=352 Identities=30% Similarity=0.491 Sum_probs=284.0
Q ss_pred HHHHH-HhcHHHHHHHHhcC-----CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc------CC
Q 048238 7 FTRAT-KLMQPHFERALESL-----PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANR------SL 74 (395)
Q Consensus 7 ~~~a~-~~~~~~l~~~l~~~-----~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~------p~ 74 (395)
++.++ +.+.+.++++|++. ++++|||+|.+++|+.++|+++|||++.|++++++.+..+..+.... |.
T Consensus 79 ~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~ 158 (451)
T PLN02410 79 FLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPL 158 (451)
T ss_pred HHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCc
Confidence 44444 56677788887652 35799999999999999999999999999999998887666542211 21
Q ss_pred CCCCC-CCCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcc
Q 048238 75 SGVQS-DDELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKS 153 (395)
Q Consensus 75 ~~~~~-~~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~ 153 (395)
... ..++..+|++|. ++.++++.+.... .......+... ..+.+++++++|||++||++++++++..+++++
T Consensus 159 --~~~~~~~~~~iPg~~~--~~~~dlp~~~~~~--~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v 231 (451)
T PLN02410 159 --KEPKGQQNELVPEFHP--LRCKDFPVSHWAS--LESIMELYRNT-VDKRTASSVIINTASCLESSSLSRLQQQLQIPV 231 (451)
T ss_pred --cccccCccccCCCCCC--CChHHCcchhcCC--cHHHHHHHHHH-hhcccCCEEEEeChHHhhHHHHHHHHhccCCCE
Confidence 111 112446788876 5666666543221 11122333222 235679999999999999999999987666799
Q ss_pred cccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC-
Q 048238 154 WCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE- 232 (395)
Q Consensus 154 ~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~- 232 (395)
++|||++...... . .....+.+|.+|||++ ++++||||||||...++.+++.+++.+|+..+++|+|+++...
T Consensus 232 ~~vGpl~~~~~~~---~-~~~~~~~~~~~wLd~~--~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~ 305 (451)
T PLN02410 232 YPIGPLHLVASAP---T-SLLEENKSCIEWLNKQ--KKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSV 305 (451)
T ss_pred EEecccccccCCC---c-cccccchHHHHHHHhC--CCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcc
Confidence 9999998643210 0 0012345789999998 8899999999999999999999999999999999999998431
Q ss_pred ------CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhh
Q 048238 233 ------SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEE 306 (395)
Q Consensus 233 ------~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~ 306 (395)
..+|++|++|..+.+ .+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.
T Consensus 306 ~~~~~~~~lp~~f~er~~~~g-~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~ 384 (451)
T PLN02410 306 RGSEWIESLPKEFSKIISGRG-YIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECV 384 (451)
T ss_pred cccchhhcCChhHHHhccCCe-EEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEeccccccCHHHHHHHHHH
Confidence 137889999987665 5559999999999999999999999999999999999999999999999999999999
Q ss_pred hceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 307 IKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 307 lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
||+|+.+. ..+++++|+++|+++|.+++|+.||++++++++.+++++.++ |||++++++|++++..
T Consensus 385 ~~~G~~~~-------~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~g-GsS~~~l~~fv~~~~~ 450 (451)
T PLN02410 385 WKIGIQVE-------GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISG-GSSHNSLEEFVHFMRT 450 (451)
T ss_pred hCeeEEeC-------CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHh
Confidence 99999996 478999999999999988778899999999999999999999 9999999999999864
No 7
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-56 Score=439.98 Aligned_cols=357 Identities=26% Similarity=0.463 Sum_probs=287.6
Q ss_pred hHHHHHH-HhcHHHHHHHHhcC---CCc-cEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCC
Q 048238 5 VPFTRAT-KLMQPHFERALESL---PHV-SFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQS 79 (395)
Q Consensus 5 ~~~~~a~-~~~~~~l~~~l~~~---~kp-D~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~ 79 (395)
..++.++ ..+.++++++|++. .+| +|||+|.+++|+.++|+++|||++.|++++++.+..+...... .
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~------~- 149 (449)
T PLN02173 77 PEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYIN------N- 149 (449)
T ss_pred HHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhc------c-
Confidence 3566666 47889999999863 145 9999999999999999999999999999988776555432110 0
Q ss_pred CCCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCC
Q 048238 80 DDELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPL 159 (395)
Q Consensus 80 ~~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl 159 (395)
...+..+|++|. ++.++++.++............+.+......+++++++|||++||+++++.++.. ++++.|||+
T Consensus 150 ~~~~~~~pg~p~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~--~~v~~VGPl 225 (449)
T PLN02173 150 GSLTLPIKDLPL--LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKV--CPVLTIGPT 225 (449)
T ss_pred CCccCCCCCCCC--CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhc--CCeeEEccc
Confidence 011455788876 7778888766432222223444445566678899999999999999999888753 479999999
Q ss_pred cccCC---CCCCCCC---CCC--CCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 048238 160 CLAEL---SPKNEEP---KNE--LSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA 231 (395)
Q Consensus 160 ~~~~~---~~~~~~~---~~~--~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~ 231 (395)
++... ......+ ..+ ..+++|.+|||++ +++++|||||||+...+.+++.+++.+| .+.+|+|++...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~--~~~svvyvsfGS~~~~~~~~~~ela~gL--s~~~flWvvr~~ 301 (449)
T PLN02173 226 VPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKR--PQGSVVYIAFGSMAKLSSEQMEEIASAI--SNFSYLWVVRAS 301 (449)
T ss_pred CchhhccccccccccccccccccccchHHHHHHhcC--CCCceEEEEecccccCCHHHHHHHHHHh--cCCCEEEEEecc
Confidence 74311 0000011 001 2345699999999 8889999999999999999999999999 678899999753
Q ss_pred C-CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceE
Q 048238 232 E-SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVA 310 (395)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g 310 (395)
. ..+|++|.++..+.|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|
T Consensus 302 ~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~G 381 (449)
T PLN02173 302 EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVG 381 (449)
T ss_pred chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCce
Confidence 2 247889988887788998999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHH
Q 048238 311 LRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETC 379 (395)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~ 379 (395)
+.+... ...+.++.++|+++|+++|.+++|+.+|+||+++++++++++.++ |||++++++|++++.
T Consensus 382 v~v~~~--~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~g-GSS~~~l~~~v~~~~ 447 (449)
T PLN02173 382 VRVKAE--KESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEG-GSTDININTFVSKIQ 447 (449)
T ss_pred EEEeec--ccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHhc
Confidence 998741 011247999999999999998888999999999999999999999 999999999999875
No 8
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=2.5e-56 Score=445.66 Aligned_cols=367 Identities=37% Similarity=0.683 Sum_probs=292.3
Q ss_pred HHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccC
Q 048238 6 PFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVT 85 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 85 (395)
.+..+...+.+.+++++++. +|||||+|.+++|+.++|+++|||+++|++++++..+.+.......+.........+..
T Consensus 102 ~~~~~~~~l~~~l~~~l~~~-~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (482)
T PLN03007 102 KFLFSTKYFKDQLEKLLETT-RPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIRVHKPQKKVASSSEPFV 180 (482)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHHhcccccccCCCCceee
Confidence 44555678889999999887 99999999999999999999999999999999887776654433322210001112334
Q ss_pred CCCCCC-CCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcccCC
Q 048238 86 PPEFPW-IKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAEL 164 (395)
Q Consensus 86 ~p~lp~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~ 164 (395)
+|++|. +.++..+++.. .........+........+++++++||+++||+++.+.+++.+..++++|||+.....
T Consensus 181 ~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~ 256 (482)
T PLN03007 181 IPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNR 256 (482)
T ss_pred CCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCCCEEEEcccccccc
Confidence 788875 54555555531 1112234455555566778999999999999999888887766668999999865322
Q ss_pred CCC--CCCC-CCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC------Ccc
Q 048238 165 SPK--NEEP-KNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE------SEL 235 (395)
Q Consensus 165 ~~~--~~~~-~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~ 235 (395)
... ..++ .....+.+|.+|||++ +++++|||||||+...+.+++.+++.+|+..+++|||+++... ..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~wLd~~--~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~l 334 (482)
T PLN03007 257 GFEEKAERGKKANIDEQECLKWLDSK--KPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWL 334 (482)
T ss_pred ccccccccCCccccchhHHHHHHhcC--CCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcC
Confidence 100 0001 0112357899999998 7899999999999888899999999999999999999998631 137
Q ss_pred chhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeec
Q 048238 236 GDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~ 315 (395)
|++|.++..+.|+++.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.|++|+.+..
T Consensus 335 p~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~ 414 (482)
T PLN03007 335 PEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGA 414 (482)
T ss_pred CHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEecc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999887777777632
Q ss_pred cCCC--CcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 316 CDGS--VRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 316 ~~~~--~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
.+.. ..+.++.++|+++|+++|.+++|++||+||+++++++++++.++ |||++++++|++++.+
T Consensus 415 ~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~~g-GsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 415 KKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVEEG-GSSFNDLNKFMEELNS 480 (482)
T ss_pred ccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHh
Confidence 1000 12468999999999999998889999999999999999999999 9999999999999875
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=4.9e-56 Score=441.74 Aligned_cols=360 Identities=35% Similarity=0.567 Sum_probs=292.0
Q ss_pred HHHhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCC-CCCCC-CCccCC
Q 048238 10 ATKLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLS-GVQSD-DELVTP 86 (395)
Q Consensus 10 a~~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~-~~~~~-~~~~~~ 86 (395)
++..+.+.++++|++. ++++|||+|.+++|+.++|+++|||++.|++++++.+..+.+.+...... ..... .++..+
T Consensus 92 ~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 171 (480)
T PLN00164 92 YIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEEVAVEFEEMEGAVDV 171 (480)
T ss_pred HHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhcccccCcccccCcceec
Confidence 5578899999999875 35699999999999999999999999999999999888777653321100 00000 124457
Q ss_pred CCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhc------CCcccccCCCc
Q 048238 87 PEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVV------KPKSWCVGPLC 160 (395)
Q Consensus 87 p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~------~~~~~~vGpl~ 160 (395)
||+|. ++..+++.++.... ......+........+++++++|||++||+++++.++... .++++.|||++
T Consensus 172 PGlp~--l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~~~~~~v~~vGPl~ 247 (480)
T PLN00164 172 PGLPP--VPASSLPAPVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVLAAIADGRCTPGRPAPTVYPIGPVI 247 (480)
T ss_pred CCCCC--CChHHCCchhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHHHHHHhccccccCCCCceEEeCCCc
Confidence 88876 77788887654321 1223344444566678999999999999999999887532 25899999998
Q ss_pred ccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC--------
Q 048238 161 LAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE-------- 232 (395)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~-------- 232 (395)
..... +.....+.+|.+|||++ ++++||||||||+..++.+++.+++.+|+..+++|||+++...
T Consensus 248 ~~~~~-----~~~~~~~~~~~~wLd~~--~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~ 320 (480)
T PLN00164 248 SLAFT-----PPAEQPPHECVRWLDAQ--PPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPT 320 (480)
T ss_pred ccccc-----CCCccchHHHHHHHHhC--CCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEEEcCCccccccccc
Confidence 53211 00022467899999999 8899999999999889999999999999999999999998531
Q ss_pred -----CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhh
Q 048238 233 -----SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEI 307 (395)
Q Consensus 233 -----~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~l 307 (395)
..+|++|.++.+++++++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.|
T Consensus 321 ~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~ 400 (480)
T PLN00164 321 DADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADM 400 (480)
T ss_pred ccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCCccccchhHHHHHHHHh
Confidence 127789999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred ceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC--hhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 308 KVALRVETCDGSVRGFVKWQGLEKTVRELMGGE--KGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 308 g~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
|+|+.+...+ ...+.++.++|.++|+++|.++ +|+.+|++|+++++++++++.+| |||++++++|++++...+
T Consensus 401 gvG~~~~~~~-~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~~~a~~~g-GSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 401 GVAVAMKVDR-KRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAACRKAVEEG-GSSYAALQRLAREIRHGA 475 (480)
T ss_pred CeEEEecccc-ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHhcc
Confidence 9999986410 0013479999999999999864 48899999999999999999999 999999999999998653
No 10
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=3.4e-56 Score=435.84 Aligned_cols=350 Identities=25% Similarity=0.381 Sum_probs=287.4
Q ss_pred hhHHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCc
Q 048238 4 YVPFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDEL 83 (395)
Q Consensus 4 ~~~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 83 (395)
+..+..++..+.++++++|++. ++||||+|+ ++|+.++|+++|||++.|++++++.++.+.. +. .. . .
T Consensus 86 ~~~~~~a~~~~~~~~~~~l~~~-~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-----~~--~~-~--~ 153 (453)
T PLN02764 86 ADLLMSAMDLTRDQVEVVVRAV-EPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-----PG--GE-L--G 153 (453)
T ss_pred HHHHHHHHHHhHHHHHHHHHhC-CCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-----cc--cc-C--C
Confidence 3457778888899999999998 899999996 8899999999999999999999988877653 11 00 0 1
Q ss_pred cCCCCCCC--CCcCcccCCCCCC--CCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCC
Q 048238 84 VTPPEFPW--IKITKKDFDPPIT--DPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPL 159 (395)
Q Consensus 84 ~~~p~lp~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl 159 (395)
..+|++|. +.++.++++.+.. ..........+..+.......++++++|||++||++++++++...+++++.|||+
T Consensus 154 ~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL 233 (453)
T PLN02764 154 VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPV 233 (453)
T ss_pred CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccC
Confidence 23477763 2355666665322 1111122334455554667789999999999999999999876545789999999
Q ss_pred cccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC------CC
Q 048238 160 CLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA------ES 233 (395)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~------~~ 233 (395)
+...... ...+.+|.+|||++ ++++||||||||+..++.+++.+++.+|+..+.+|+|+++.. ..
T Consensus 234 ~~~~~~~-------~~~~~~cl~WLD~q--~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~ 304 (453)
T PLN02764 234 FPEPDKT-------RELEERWVKWLSGY--EPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQE 304 (453)
T ss_pred ccCcccc-------ccchhHHHHHHhCC--CCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhh
Confidence 7543110 11357899999999 899999999999999999999999999999999999999853 12
Q ss_pred ccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEe
Q 048238 234 ELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRV 313 (395)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~ 313 (395)
.+|++|+++.++.|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|++.||+.||+++++.||+|+.+
T Consensus 305 ~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~ 384 (453)
T PLN02764 305 ALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEV 384 (453)
T ss_pred hCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEe
Confidence 48899999999999999999999999999999999999999999999999999999999999999999998777999988
Q ss_pred eccCCCCcCccCHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 314 ETCDGSVRGFVKWQGLEKTVRELMGG--EKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
... ..+.++.++|+++|+++|++ ++|+.+|++++++++.++ ++ |||.+++++|++++....
T Consensus 385 ~~~---~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~----~~-GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 385 ARE---ETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLA----SP-GLLTGYVDNFIESLQDLV 447 (453)
T ss_pred ccc---cCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHH----hc-CCHHHHHHHHHHHHHHhc
Confidence 541 01368999999999999987 348899999999999994 57 999999999999988753
No 11
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=3.6e-56 Score=437.49 Aligned_cols=344 Identities=24% Similarity=0.389 Sum_probs=281.9
Q ss_pred HHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccC
Q 048238 6 PFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVT 85 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 85 (395)
.+..+++.+.+.+++++++. ++||||+| ++.|+.++|+++|||++.|++++++.+. +.+.. .. . ....
T Consensus 87 ~~~~~~~~~~~~l~~~L~~~-~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~----~~--~---~~~~ 154 (442)
T PLN02208 87 LLSEALDLTRDQVEAAVRAL-RPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVP----GG--K---LGVP 154 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhC-CCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccC----cc--c---cCCC
Confidence 45666788999999999998 99999999 5889999999999999999999998654 33221 10 0 0123
Q ss_pred CCCCCC--CCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcccC
Q 048238 86 PPEFPW--IKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAE 163 (395)
Q Consensus 86 ~p~lp~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~ 163 (395)
+|++|. +.++.++++.+ .. ....+..+..+......+++++++|||++||+++++++++.+.++++.|||++...
T Consensus 155 ~pglp~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~ 231 (442)
T PLN02208 155 PPGYPSSKVLFRENDAHAL-AT--LSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEP 231 (442)
T ss_pred CCCCCCcccccCHHHcCcc-cc--cchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCc
Confidence 577775 34566677653 11 11112233333445667899999999999999999998877778999999998653
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC-C-----Cccch
Q 048238 164 LSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA-E-----SELGD 237 (395)
Q Consensus 164 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~-~-----~~~~~ 237 (395)
... .+++.+|.+|||++ ++++||||||||+..++.+++.+++.+++..+.+|+|+++.. . ..+|+
T Consensus 232 ~~~-------~~~~~~~~~wLd~~--~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~ 302 (442)
T PLN02208 232 DTS-------KPLEEQWSHFLSGF--PPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPE 302 (442)
T ss_pred CCC-------CCCHHHHHHHHhcC--CCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCH
Confidence 311 33578999999998 788999999999998899999999999988899999988753 1 24889
Q ss_pred hHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccC
Q 048238 238 GFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCD 317 (395)
Q Consensus 238 ~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~ 317 (395)
+|+++.++.|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.++..
T Consensus 303 ~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~- 381 (442)
T PLN02208 303 GFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSRE- 381 (442)
T ss_pred HHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999988877999999751
Q ss_pred CCCcCccCHHHHHHHHHHHhCCC--hhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 318 GSVRGFVKWQGLEKTVRELMGGE--KGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 318 ~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
.++.+++++|+++|+++|+++ +|+.+|++++++++.+. ++ |||.+++++|++++..+
T Consensus 382 --~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~-gsS~~~l~~~v~~l~~~ 440 (442)
T PLN02208 382 --KTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SP-GLLTGYVDKFVEELQEY 440 (442)
T ss_pred --cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cC-CcHHHHHHHHHHHHHHh
Confidence 113489999999999999765 38899999999999984 47 99999999999998653
No 12
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=1.7e-56 Score=439.31 Aligned_cols=348 Identities=32% Similarity=0.542 Sum_probs=284.5
Q ss_pred hHHHHHHHhcHHHHHHHHhcC---CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc-CCCCCC-C
Q 048238 5 VPFTRATKLMQPHFERALESL---PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANR-SLSGVQ-S 79 (395)
Q Consensus 5 ~~~~~a~~~~~~~l~~~l~~~---~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~-p~~~~~-~ 79 (395)
..++.++..+.+.+.++|++. .+++|||+|.+++|+.++|+++|||+++|++++++.++.+.+.+... +..... .
T Consensus 87 ~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~ 166 (451)
T PLN03004 87 SLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTIDETTPGKNLK 166 (451)
T ss_pred HHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhccccccccccc
Confidence 356666678888999999864 24599999999999999999999999999999999888877644211 100001 1
Q ss_pred CCCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcC-CcccccCC
Q 048238 80 DDELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVK-PKSWCVGP 158 (395)
Q Consensus 80 ~~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~-~~~~~vGp 158 (395)
...+..+||+|. ++.++++.++... .......+.+......+++++++|||++||+++++.++..+. ++++.|||
T Consensus 167 ~~~~v~iPg~p~--l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGP 242 (451)
T PLN03004 167 DIPTVHIPGVPP--MKGSDMPKAVLER--DDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGP 242 (451)
T ss_pred cCCeecCCCCCC--CChHHCchhhcCC--chHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEee
Confidence 112456888887 7788888766532 122345556666677789999999999999999998876432 68999999
Q ss_pred CcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC------
Q 048238 159 LCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE------ 232 (395)
Q Consensus 159 l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~------ 232 (395)
++...... ..+ ...+.+|.+|||++ ++++||||||||+..++.+++++|+.+|+..+++|+|+++...
T Consensus 243 l~~~~~~~--~~~--~~~~~~c~~wLd~~--~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~~~ 316 (451)
T PLN03004 243 LIVNGRIE--DRN--DNKAVSCLNWLDSQ--PEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEKTE 316 (451)
T ss_pred eccCcccc--ccc--cchhhHHHHHHHhC--CCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccccc
Confidence 98532110 000 11245799999999 8899999999999999999999999999999999999998531
Q ss_pred ---Cc-cchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhc
Q 048238 233 ---SE-LGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIK 308 (395)
Q Consensus 233 ---~~-~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg 308 (395)
.. +|++|++|.++.|+++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||
T Consensus 317 ~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g 396 (451)
T PLN03004 317 LDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIK 396 (451)
T ss_pred cchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhC
Confidence 12 78899999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred eEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHH
Q 048238 309 VALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWR 369 (395)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~ 369 (395)
+|+.++.. ..+.++.++|+++|+++|+|+ +||+++++++++++.|+++| |||++
T Consensus 397 ~g~~l~~~---~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~G-GSS~~ 450 (451)
T PLN03004 397 IAISMNES---ETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTET-GSSHT 450 (451)
T ss_pred ceEEecCC---cCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCC-CCCCC
Confidence 99999751 113579999999999999876 89999999999999999999 99864
No 13
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-55 Score=434.72 Aligned_cols=364 Identities=27% Similarity=0.503 Sum_probs=283.7
Q ss_pred hhHHHHHHHhc----HHHHHHHHhcC----CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhcc-CC
Q 048238 4 YVPFTRATKLM----QPHFERALESL----PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANR-SL 74 (395)
Q Consensus 4 ~~~~~~a~~~~----~~~l~~~l~~~----~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~-p~ 74 (395)
...++.+++.+ .+.+.+++++. ++++|||+|.+++|+.++|+++|||+++|++++++.++.+.+.+... +.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~~~~ 163 (468)
T PLN02207 84 EAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRHSKD 163 (468)
T ss_pred HHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhccccc
Confidence 34555666666 55667776642 13489999999999999999999999999999998877766543211 11
Q ss_pred CC-CCCC-CCccCCCCC-CCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhh-hcC
Q 048238 75 SG-VQSD-DELVTPPEF-PWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNR-VVK 150 (395)
Q Consensus 75 ~~-~~~~-~~~~~~p~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~-~~~ 150 (395)
.. .... ..++.+||+ |. ++..+++.++... .. ...+.+......+++++++||+++||+++++.++. ...
T Consensus 164 ~~~~~~~~~~~~~vPgl~~~--l~~~dlp~~~~~~---~~-~~~~~~~~~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~ 237 (468)
T PLN02207 164 TSVFVRNSEEMLSIPGFVNP--VPANVLPSALFVE---DG-YDAYVKLAILFTKANGILVNSSFDIEPYSVNHFLDEQNY 237 (468)
T ss_pred cccCcCCCCCeEECCCCCCC--CChHHCcchhcCC---cc-HHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHHhccCC
Confidence 00 0000 124567888 45 7778888766422 11 33344555567889999999999999999888854 234
Q ss_pred CcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 048238 151 PKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRK 230 (395)
Q Consensus 151 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~ 230 (395)
++++.|||++...... .... ....+.+|.+|||++ ++++||||||||...++.+++++++.+|+..+++|||+++.
T Consensus 238 p~v~~VGPl~~~~~~~-~~~~-~~~~~~~~~~WLd~~--~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~ 313 (468)
T PLN02207 238 PSVYAVGPIFDLKAQP-HPEQ-DLARRDELMKWLDDQ--PEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRT 313 (468)
T ss_pred CcEEEecCCcccccCC-CCcc-ccchhhHHHHHHhcC--CCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 7899999998643210 0000 011236799999998 78899999999999999999999999999999999999985
Q ss_pred CC----CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhh
Q 048238 231 AE----SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEE 306 (395)
Q Consensus 231 ~~----~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~ 306 (395)
.. ..+|++|+++..+.+ .+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.
T Consensus 314 ~~~~~~~~lp~~f~er~~~~g-~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~ 392 (468)
T PLN02207 314 EEVTNDDLLPEGFLDRVSGRG-MICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKE 392 (468)
T ss_pred CCccccccCCHHHHhhcCCCe-EEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecCccccchhhHHHHHHH
Confidence 31 237789988876555 5669999999999999999999999999999999999999999999999999999897
Q ss_pred hceEEEeeccC-CCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 307 IKVALRVETCD-GSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 307 lg~g~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
||+|+.+..+. .+..+.++.++|.++|+++|.+ ++++||+||+++++++++|+.+| |||.+++++|++++..
T Consensus 393 ~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~G-GSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 393 LKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNG-GSSFAAIEKFIHDVIG 465 (468)
T ss_pred hCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHHh
Confidence 89999884210 0112346999999999999973 36699999999999999999999 9999999999999864
No 14
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.2e-55 Score=436.19 Aligned_cols=362 Identities=27% Similarity=0.438 Sum_probs=285.2
Q ss_pred HHHHHH-HhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhc-cCCCCCCCC-CC
Q 048238 6 PFTRAT-KLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGAN-RSLSGVQSD-DE 82 (395)
Q Consensus 6 ~~~~a~-~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~-~p~~~~~~~-~~ 82 (395)
.++.++ +.+.+.++++|++. +|||||+|.+++|+.++|+++|||.++|++++++.+..+.+.... .+.. .... .+
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~~-~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~-~~~~~~~ 159 (456)
T PLN02210 82 TLLKSLNKVGAKNLSKIIEEK-RYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFP-DLEDLNQ 159 (456)
T ss_pred HHHHHHHHhhhHHHHHHHhcC-CCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCC-cccccCC
Confidence 455566 57788999999988 899999999999999999999999999999999887776654221 1110 1111 12
Q ss_pred ccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCccc
Q 048238 83 LVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLA 162 (395)
Q Consensus 83 ~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~ 162 (395)
+..+|+++. ++.++++.++.... .......+.+.......++++++|||++||+++++.+++ . +++++|||+++.
T Consensus 160 ~~~~Pgl~~--~~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~-~~v~~VGPl~~~ 234 (456)
T PLN02210 160 TVELPALPL--LEVRDLPSFMLPSG-GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-L-KPVIPIGPLVSP 234 (456)
T ss_pred eeeCCCCCC--CChhhCChhhhcCC-chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-c-CCEEEEcccCch
Confidence 355788876 66677776554321 111333344454556678999999999999999998876 3 689999999852
Q ss_pred C---CCCCC-CCC---CCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC-Cc
Q 048238 163 E---LSPKN-EEP---KNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE-SE 234 (395)
Q Consensus 163 ~---~~~~~-~~~---~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~-~~ 234 (395)
. ..... ..+ ..+..+.+|.+|||++ +++++|||||||....+.+++++++.+|+..+++|||+++... ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~--~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~ 312 (456)
T PLN02210 235 FLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQ--ARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQ 312 (456)
T ss_pred hhcCcccccccccccccccccchHHHHHHhCC--CCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCcccc
Confidence 1 11000 001 0123467899999998 7889999999999888999999999999999999999997531 12
Q ss_pred cchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEee
Q 048238 235 LGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVE 314 (395)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~ 314 (395)
.+.++.++....+..+.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.+.
T Consensus 313 ~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~ 392 (456)
T PLN02210 313 NVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMR 392 (456)
T ss_pred chhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEe
Confidence 34456666532334566999999999999999999999999999999999999999999999999999988779999996
Q ss_pred ccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHH
Q 048238 315 TCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETC 379 (395)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~ 379 (395)
.. ...+.+++++|+++|+++|.+++|+++|+||++|++.+++|+++| |||++++++|+++++
T Consensus 393 ~~--~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~g-GSS~~~l~~~v~~~~ 454 (456)
T PLN02210 393 ND--AVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPG-GSSARNLDLFISDIT 454 (456)
T ss_pred cc--ccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHh
Confidence 41 012468999999999999998888899999999999999999999 999999999999876
No 15
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.5e-55 Score=434.42 Aligned_cols=365 Identities=26% Similarity=0.406 Sum_probs=286.0
Q ss_pred HHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCC-CCCCCCCcc
Q 048238 6 PFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLS-GVQSDDELV 84 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ 84 (395)
.+..+.+.+.+.+++++++. +++|||+|.+++|+.++|+++|||+++|++++++.++.+.......... .........
T Consensus 90 ~~~~~~~~~~~~~~~~l~~~-~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (472)
T PLN02670 90 LLKKAFDLLEPPLTTFLETS-KPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFT 168 (472)
T ss_pred HHHHHHHHhHHHHHHHHHhC-CCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCcccccc
Confidence 45566688999999999998 8999999999999999999999999999999998877765332111000 001111111
Q ss_pred CCCCC-C---CCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCc
Q 048238 85 TPPEF-P---WIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLC 160 (395)
Q Consensus 85 ~~p~l-p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~ 160 (395)
.+|++ | .+.++.++++.++............+.+....+.+++++++|||++||+++++.++..++++++.|||+.
T Consensus 169 ~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~ 248 (472)
T PLN02670 169 VVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLP 248 (472)
T ss_pred CCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCC
Confidence 23433 2 1235566777666432212122333344445567899999999999999999999876567899999997
Q ss_pred ccC-CCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC-------
Q 048238 161 LAE-LSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE------- 232 (395)
Q Consensus 161 ~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~------- 232 (395)
... ......... .....+|.+|||++ ++++||||||||+..++.+++.+++.+|+..+++|||+++...
T Consensus 249 ~~~~~~~~~~~~~-~~~~~~~~~wLd~~--~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~ 325 (472)
T PLN02670 249 PVIEDDEEDDTID-VKGWVRIKEWLDKQ--RVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNAL 325 (472)
T ss_pred ccccccccccccc-cchhHHHHHHHhcC--CCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchh
Confidence 531 110000000 01125799999998 7899999999999999999999999999999999999998531
Q ss_pred CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEE
Q 048238 233 SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALR 312 (395)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~ 312 (395)
..+|++|.++.++.++++.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++ +|+|+.
T Consensus 326 ~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~ 404 (472)
T PLN02670 326 EMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLE 404 (472)
T ss_pred hcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEE
Confidence 1488899999999999999999999999999999999999999999999999999999999999999999966 599999
Q ss_pred eeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 313 VETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
+... ..++.++.++|+++|+++|.+++|++||+||+++++.+++. +...+++++|+.++....
T Consensus 405 l~~~--~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~-----~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 405 VPRD--ERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDM-----DRNNRYVDELVHYLRENR 467 (472)
T ss_pred eecc--ccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCc-----chhHHHHHHHHHHHHHhc
Confidence 9751 11245899999999999998887889999999999999843 557889999999998876
No 16
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=1.2e-55 Score=433.77 Aligned_cols=354 Identities=26% Similarity=0.461 Sum_probs=281.4
Q ss_pred hHHHHHHHhcHHHHHHHHhcC----CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCC
Q 048238 5 VPFTRATKLMQPHFERALESL----PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSD 80 (395)
Q Consensus 5 ~~~~~a~~~~~~~l~~~l~~~----~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 80 (395)
..+..+...+.+.+.++|++. .+++|||+|.+++|+.++|+++|||++.|++++++.+..+.+.....+
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~------- 152 (455)
T PLN02152 80 NRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNN------- 152 (455)
T ss_pred HHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCC-------
Confidence 345555577889999998863 245999999999999999999999999999999998887765432111
Q ss_pred CCccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhcc--CcceeeeccccccchhhHHHhhhhcCCcccccCC
Q 048238 81 DELVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTS--NSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGP 158 (395)
Q Consensus 81 ~~~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGp 158 (395)
.+..+|++|. ++.++++.++............+.+..+... .++++++|||++||+++++.++. .+++.|||
T Consensus 153 -~~~~iPglp~--l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~---~~v~~VGP 226 (455)
T PLN02152 153 -SVFEFPNLPS--LEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN---IEMVAVGP 226 (455)
T ss_pred -CeeecCCCCC--CchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc---CCEEEEcc
Confidence 1456888876 7778888877533222323444545555443 35799999999999999988865 36999999
Q ss_pred CcccCCCCCCCCC---CCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC---
Q 048238 159 LCLAELSPKNEEP---KNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE--- 232 (395)
Q Consensus 159 l~~~~~~~~~~~~---~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~--- 232 (395)
+++.........+ .....+.+|.+|||++ ++++||||||||+..++.+++++++.+|+..+++|||+++...
T Consensus 227 L~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~--~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~ 304 (455)
T PLN02152 227 LLPAEIFTGSESGKDLSVRDQSSSYTLWLDSK--TESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNRE 304 (455)
T ss_pred cCccccccccccCccccccccchHHHHHhhCC--CCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccc
Confidence 9853210000001 0012345799999998 7789999999999999999999999999999999999997520
Q ss_pred -----C-----ccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHH
Q 048238 233 -----S-----ELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARM 302 (395)
Q Consensus 233 -----~-----~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~ 302 (395)
. .++++|.++.++.+ .+.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||++
T Consensus 305 ~~~~~~~~~~~~~~~~f~e~~~~~g-~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~ 383 (455)
T PLN02152 305 AKIEGEEETEIEKIAGFRHELEEVG-MIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKL 383 (455)
T ss_pred cccccccccccccchhHHHhccCCe-EEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEeccccccchHHHHH
Confidence 0 13578877765544 666999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHH
Q 048238 303 VTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETC 379 (395)
Q Consensus 303 v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~ 379 (395)
+++.||+|+.+.. +..+.++.++|+++|+++|+++ ++.||+||++++++++++..++ |||.+++++|+++++
T Consensus 384 ~~~~~~~G~~~~~---~~~~~~~~e~l~~av~~vm~~~-~~~~r~~a~~~~~~~~~a~~~g-gsS~~nl~~li~~i~ 455 (455)
T PLN02152 384 LEEIWKTGVRVRE---NSEGLVERGEIRRCLEAVMEEK-SVELRESAEKWKRLAIEAGGEG-GSSDKNVEAFVKTLC 455 (455)
T ss_pred HHHHhCceEEeec---CcCCcCcHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHhC
Confidence 9998888888753 1123569999999999999743 5679999999999999999999 999999999999864
No 17
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1e-53 Score=422.04 Aligned_cols=356 Identities=25% Similarity=0.398 Sum_probs=281.3
Q ss_pred hhHHHHHHH-hcHHHHHHHHhcC---CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCC-CCC
Q 048238 4 YVPFTRATK-LMQPHFERALESL---PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLS-GVQ 78 (395)
Q Consensus 4 ~~~~~~a~~-~~~~~l~~~l~~~---~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~-~~~ 78 (395)
+..++.++. .+.+.+.+++++. .+++|||+|.+++|+.++|+++|||+++|++++++.+..+.+.+...... ...
T Consensus 76 ~~~l~~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~ 155 (448)
T PLN02562 76 FFSIENSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISE 155 (448)
T ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcccccc
Confidence 335667775 6899999999875 13489999999999999999999999999999998777665443211110 000
Q ss_pred C----CCCc-cCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhh----hc
Q 048238 79 S----DDEL-VTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNR----VV 149 (395)
Q Consensus 79 ~----~~~~-~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~----~~ 149 (395)
. ..++ ..+|++|. ++.++++.++............+.+......+++++++|||++||+.+++..+. ..
T Consensus 156 ~~~~~~~~~~~~~Pg~~~--l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~ 233 (448)
T PLN02562 156 TGCPRQLEKICVLPEQPL--LSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNGQ 233 (448)
T ss_pred ccccccccccccCCCCCC--CChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhcccc
Confidence 0 0012 25778876 777888876643321222345556666777789999999999999988876642 23
Q ss_pred CCcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccc-cCCHHHHHHHHHHHHhCCCcEEEEE
Q 048238 150 KPKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQA-EISAQQLKEIATGLEQSKVNFLWVI 228 (395)
Q Consensus 150 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~-~~~~~~~~~l~~~l~~~~~~~i~~~ 228 (395)
.++++.|||++...... .......+.+.+|.+|||++ +++++|||||||+. .++.+++++++.+|+..+++|||++
T Consensus 234 ~~~v~~iGpl~~~~~~~-~~~~~~~~~~~~c~~wLd~~--~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~ 310 (448)
T PLN02562 234 NPQILQIGPLHNQEATT-ITKPSFWEEDMSCLGWLQEQ--KPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVL 310 (448)
T ss_pred CCCEEEecCcccccccc-cCCCccccchHHHHHHHhcC--CCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 47899999998654210 00000012346788999998 77899999999986 6788999999999999999999999
Q ss_pred cCCC-CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhh
Q 048238 229 RKAE-SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEI 307 (395)
Q Consensus 229 ~~~~-~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~l 307 (395)
+... ..++++|.++.. .|+.+.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.|
T Consensus 311 ~~~~~~~l~~~~~~~~~-~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~ 389 (448)
T PLN02562 311 NPVWREGLPPGYVERVS-KQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVW 389 (448)
T ss_pred cCCchhhCCHHHHHHhc-cCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHh
Confidence 7532 247888888764 46677799999999999999999999999999999999999999999999999999998878
Q ss_pred ceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHH
Q 048238 308 KVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDET 378 (395)
Q Consensus 308 g~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~ 378 (395)
|+|+.+. .++.++|.++|+++|.|+ +||+||+++++.++++ .++ |||.+++++|++++
T Consensus 390 g~g~~~~--------~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~g-GSS~~nl~~~v~~~ 447 (448)
T PLN02562 390 KIGVRIS--------GFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EAR-LRSMMNFTTLKDEL 447 (448)
T ss_pred CceeEeC--------CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCC-CCHHHHHHHHHHHh
Confidence 9998884 368999999999999887 8999999999999887 778 99999999999986
No 18
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=7.1e-54 Score=421.70 Aligned_cols=343 Identities=27% Similarity=0.425 Sum_probs=276.5
Q ss_pred HHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccC
Q 048238 6 PFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVT 85 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 85 (395)
.+..++..+.+.++++++.. +|||||+|+ ++|+.++|+++|||++.|++++++.++.+.+.... . ...
T Consensus 87 ~~~~a~~~l~~~l~~~L~~~-~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~--------~--~~~ 154 (446)
T PLN00414 87 PIFDAMDLLRDQIEAKVRAL-KPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAE--------L--GFP 154 (446)
T ss_pred HHHHHHHHHHHHHHHHHhcC-CCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhh--------c--CCC
Confidence 46677788999999999887 899999996 88999999999999999999999888776652110 0 123
Q ss_pred CCCCCC--CCcCcccC--CCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcc
Q 048238 86 PPEFPW--IKITKKDF--DPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCL 161 (395)
Q Consensus 86 ~p~lp~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~ 161 (395)
+|++|. +.++..+. +.++.. ....+.+......+++++++|||++||+.+++.++..++++++.|||++.
T Consensus 155 ~pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~ 228 (446)
T PLN00414 155 PPDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLP 228 (446)
T ss_pred CCCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCC
Confidence 466664 11222222 222211 12344555566778999999999999999999988765678999999975
Q ss_pred cCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC------CCcc
Q 048238 162 AELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA------ESEL 235 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~------~~~~ 235 (395)
..... .+ ...+.+|.+|||++ ++++||||||||....+.+++.+++.+|+..+.+|+|++... ...+
T Consensus 229 ~~~~~---~~--~~~~~~~~~WLD~q--~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~l 301 (446)
T PLN00414 229 EPQNK---SG--KPLEDRWNHWLNGF--EPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEAL 301 (446)
T ss_pred Ccccc---cC--cccHHHHHHHHhcC--CCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhC
Confidence 33110 00 11245799999999 899999999999999999999999999999999999999763 1248
Q ss_pred chhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeec
Q 048238 236 GDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~ 315 (395)
|++|+++.++.++++.+|+||.+||+|+++++|||||||||++|++++|||||++|++.||+.||+++++.||+|+.+..
T Consensus 302 p~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~ 381 (446)
T PLN00414 302 PEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQR 381 (446)
T ss_pred ChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEecc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999887899999964
Q ss_pred cCCCCcCccCHHHHHHHHHHHhCCC--hhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 316 CDGSVRGFVKWQGLEKTVRELMGGE--KGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 316 ~~~~~~~~~~~~~l~~~i~~~l~~~--~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
+ ..+.+++++|+++++++|.++ .|+.+|++++++++.+. +++ |++ ..+++|++++...
T Consensus 382 ~---~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~g-g~s-s~l~~~v~~~~~~ 441 (446)
T PLN00414 382 E---DSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPG-LLS-GYADKFVEALENE 441 (446)
T ss_pred c---cCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCC-CcH-HHHHHHHHHHHHh
Confidence 1 013589999999999999764 37889999999999974 556 633 4589999988543
No 19
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.7e-54 Score=425.97 Aligned_cols=361 Identities=35% Similarity=0.538 Sum_probs=278.7
Q ss_pred HHHHHHHhcHHHHHHHHhcC--------C-CccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCC
Q 048238 6 PFTRATKLMQPHFERALESL--------P-HVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSG 76 (395)
Q Consensus 6 ~~~~a~~~~~~~l~~~l~~~--------~-kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~ 76 (395)
.+..++..+.+.+++.|++. + +++|||+|.+++|+.++|+++|||+++|++++++.++.+.+.+.......
T Consensus 88 ~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~~~~~~~ 167 (475)
T PLN02167 88 YILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPERHRKTA 167 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHHhccccc
Confidence 44444556666666666542 1 35999999999999999999999999999999988887765432110000
Q ss_pred -C--CCC-CCccCCCCCC-CCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhc--
Q 048238 77 -V--QSD-DELVTPPEFP-WIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVV-- 149 (395)
Q Consensus 77 -~--~~~-~~~~~~p~lp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~-- 149 (395)
. ... .++..+||++ . ++..+++.++... . ....+.+......+++++++|||++||+++++.++...
T Consensus 168 ~~~~~~~~~~~~~iPgl~~~--l~~~dlp~~~~~~---~-~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~ 241 (475)
T PLN02167 168 SEFDLSSGEEELPIPGFVNS--VPTKVLPPGLFMK---E-SYEAWVEIAERFPEAKGILVNSFTELEPNAFDYFSRLPEN 241 (475)
T ss_pred cccccCCCCCeeECCCCCCC--CChhhCchhhhCc---c-hHHHHHHHHHhhcccCEeeeccHHHHHHHHHHHHHhhccc
Confidence 0 001 1245578873 4 5555666544322 1 13344455566778999999999999999998886531
Q ss_pred CCcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEc
Q 048238 150 KPKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIR 229 (395)
Q Consensus 150 ~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~ 229 (395)
-|++++|||++...... ........+.+|.+|||++ +++++|||||||+...+.+++.+++.+|+..+++|||+++
T Consensus 242 ~p~v~~vGpl~~~~~~~--~~~~~~~~~~~~~~wld~~--~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~ 317 (475)
T PLN02167 242 YPPVYPVGPILSLKDRT--SPNLDSSDRDRIMRWLDDQ--PESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIR 317 (475)
T ss_pred CCeeEEecccccccccc--CCCCCcchhHHHHHHHhcC--CCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEe
Confidence 16899999998643210 0000011236799999998 7889999999999888999999999999999999999997
Q ss_pred CCC-------CccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHH
Q 048238 230 KAE-------SELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARM 302 (395)
Q Consensus 230 ~~~-------~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~ 302 (395)
... ..+|++|.+++.+.++ +.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||++
T Consensus 318 ~~~~~~~~~~~~lp~~~~er~~~rg~-v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~ 396 (475)
T PLN02167 318 TNPAEYASPYEPLPEGFMDRVMGRGL-VCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQLNAFT 396 (475)
T ss_pred cCcccccchhhhCChHHHHHhccCee-eeccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEeccccccchhhHHH
Confidence 531 1378899988877764 55999999999999999999999999999999999999999999999999988
Q ss_pred HhhhhceEEEeeccCCCC-cCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 303 VTEEIKVALRVETCDGSV-RGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 303 v~~~lg~g~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
+++.||+|+.+....+.+ ...+++++|+++|+++|.+++ .||++++++++.+++++.++ |||++++++||+++..
T Consensus 397 ~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~--~~r~~a~~~~~~~~~av~~g-GsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 397 MVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGED--VPRKKVKEIAEAARKAVMDG-GSSFVAVKRFIDDLLG 472 (475)
T ss_pred HHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHh
Confidence 767779999986411000 135799999999999997653 89999999999999999999 9999999999999875
No 20
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.2e-53 Score=422.88 Aligned_cols=338 Identities=31% Similarity=0.491 Sum_probs=267.3
Q ss_pred ccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCC--CC-CC-CCC-CccCCCCCC-CCCcCcccCCC
Q 048238 28 VSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSL--SG-VQ-SDD-ELVTPPEFP-WIKITKKDFDP 101 (395)
Q Consensus 28 pD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~--~~-~~-~~~-~~~~~p~lp-~~~~~~~~~~~ 101 (395)
.+|||+|.+++|+.++|+++|||+++|++++++.++.+.+++..... .. .. ... .+..+|+++ . ++..+++.
T Consensus 113 v~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~p--l~~~dlp~ 190 (481)
T PLN02554 113 LAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRP--YPVKCLPS 190 (481)
T ss_pred eEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCC--CCHHHCCC
Confidence 38999999999999999999999999999999998888765432110 00 00 111 234577773 3 56667776
Q ss_pred CCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhh--cCCcccccCCCcccCCCCCCCCCCCCCCchH
Q 048238 102 PITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRV--VKPKSWCVGPLCLAELSPKNEEPKNELSKPA 179 (395)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~--~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~ 179 (395)
++... .....+.+....+.+++++++||+++||+.+...+.+. ..++++.|||++...... .......+.+
T Consensus 191 ~~~~~----~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~---~~~~~~~~~~ 263 (481)
T PLN02554 191 VLLSK----EWLPLFLAQARRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSG---DDSKDEKQSE 263 (481)
T ss_pred cccCH----HHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccc---cccccccchH
Confidence 55321 23445556666778899999999999999998877652 237899999995322110 0000234578
Q ss_pred HHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC---------------CccchhHHHHhc
Q 048238 180 WIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE---------------SELGDGFEERVK 244 (395)
Q Consensus 180 l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~---------------~~~~~~~~~~~~ 244 (395)
|.+|||++ ++++||||||||+..++.+++.+++.+|+..+++|||+++... ..+|++|+++..
T Consensus 264 ~~~wLd~~--~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~ 341 (481)
T PLN02554 264 ILRWLDEQ--PPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTK 341 (481)
T ss_pred HHHHHhcC--CCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhc
Confidence 99999998 7789999999999889999999999999999999999997521 125788888876
Q ss_pred CCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCC-----C
Q 048238 245 GRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDG-----S 319 (395)
Q Consensus 245 ~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~-----~ 319 (395)
+.+ .+.+|+||.+||+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.+....+ +
T Consensus 342 ~~g-~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~ 420 (481)
T PLN02554 342 DIG-KVIGWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAG 420 (481)
T ss_pred cCc-eEEeeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeecccccccccc
Confidence 555 5569999999999999999999999999999999999999999999999999776677799999863100 0
Q ss_pred CcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 320 VRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
+...+++++|.++|+++|.++ ++||+||+++++++++++.++ ||+.+++++|++++..
T Consensus 421 ~~~~~~~e~l~~av~~vm~~~--~~~r~~a~~l~~~~~~av~~g-Gss~~~l~~lv~~~~~ 478 (481)
T PLN02554 421 EMETVTAEEIERGIRCLMEQD--SDVRKRVKEMSEKCHVALMDG-GSSHTALKKFIQDVTK 478 (481)
T ss_pred ccCeEcHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhcCC-ChHHHHHHHHHHHHHh
Confidence 124689999999999999732 289999999999999999999 9999999999999875
No 21
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=3.4e-52 Score=413.92 Aligned_cols=363 Identities=30% Similarity=0.494 Sum_probs=281.6
Q ss_pred HHHHHH-HhcHHHHHHHHhcC-CCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCC---CCCCC-
Q 048238 6 PFTRAT-KLMQPHFERALESL-PHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSL---SGVQS- 79 (395)
Q Consensus 6 ~~~~a~-~~~~~~l~~~l~~~-~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~---~~~~~- 79 (395)
.++.++ +.+.+.+.+++++. .++||||+|.+++|+..+|+++|||++.|++++++.++.+.+....... .....
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 164 (459)
T PLN02448 85 GFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELSE 164 (459)
T ss_pred HHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCcccc
Confidence 344454 57888999999874 3689999999999999999999999999999999777766554321110 00110
Q ss_pred -CCC-ccCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccC
Q 048238 80 -DDE-LVTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVG 157 (395)
Q Consensus 80 -~~~-~~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vG 157 (395)
..+ ...+|+++. ++..+++.++... .....+.+.+......+++++++|||++||+.+++++++.++++++.||
T Consensus 165 ~~~~~~~~iPg~~~--l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iG 240 (459)
T PLN02448 165 SGEERVDYIPGLSS--TRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIG 240 (459)
T ss_pred ccCCccccCCCCCC--CChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEec
Confidence 011 113677765 6666777655432 1222334455555667788999999999999999988876667899999
Q ss_pred CCcccCCCCCCCCC-CCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccc
Q 048238 158 PLCLAELSPKNEEP-KNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELG 236 (395)
Q Consensus 158 pl~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~ 236 (395)
|+.+.......... .....+.++.+|++.+ +++++|||||||....+.+++++++.+|+..+++|||+++.. .
T Consensus 241 P~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~--~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~----~ 314 (459)
T PLN02448 241 PSIPYMELKDNSSSSNNEDNEPDYFQWLDSQ--PEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGE----A 314 (459)
T ss_pred CcccccccCCCccccccccchhHHHHHHcCC--CCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCc----h
Confidence 99763211000000 0011235899999998 789999999999988889999999999999999999987642 1
Q ss_pred hhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeecc
Q 048238 237 DGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETC 316 (395)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~ 316 (395)
.++.++.. .|+.+.+|+||.+||+|+++++|||||||||++||+++|||||++|+++||+.||+++++.||+|+.+...
T Consensus 315 ~~~~~~~~-~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~ 393 (459)
T PLN02448 315 SRLKEICG-DMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE 393 (459)
T ss_pred hhHhHhcc-CCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc
Confidence 24444332 46777799999999999999999999999999999999999999999999999999999988999998631
Q ss_pred CCCCcCccCHHHHHHHHHHHhCC--ChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 317 DGSVRGFVKWQGLEKTVRELMGG--EKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 317 ~~~~~~~~~~~~l~~~i~~~l~~--~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
. +..+.+++++|+++|+++|.+ ++|+.||++|++|++++++++.++ |||.+++++|++++.+.
T Consensus 394 ~-~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~g-Gss~~~l~~~v~~~~~~ 458 (459)
T PLN02448 394 V-GEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKG-GSSDTNLDAFIRDISQG 458 (459)
T ss_pred c-ccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC-CcHHHHHHHHHHHHhcc
Confidence 0 011357999999999999986 358899999999999999999999 99999999999999864
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.3e-43 Score=352.11 Aligned_cols=321 Identities=19% Similarity=0.231 Sum_probs=237.9
Q ss_pred HHHHHHHHh--cCCCccEEEECCchhhHHHHHHHc-CCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccCCC----
Q 048238 15 QPHFERALE--SLPHVSFMVSDGFLWWTLDSANKF-GFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVTPP---- 87 (395)
Q Consensus 15 ~~~l~~~l~--~~~kpD~vI~D~~~~~~~~~A~~l-gIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p---- 87 (395)
.+.+.++|+ +. +||+||+|.+..|++.+|+.+ ++|.|.++++....... ...+ ..|.. +.++|
T Consensus 123 ~~~~~~~L~~~~~-kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~-~~~g-g~p~~-------~syvP~~~~ 192 (507)
T PHA03392 123 LPNVKNLIANKNN-KFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF-ETMG-AVSRH-------PVYYPNLWR 192 (507)
T ss_pred CHHHHHHHhcCCC-ceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH-Hhhc-cCCCC-------CeeeCCccc
Confidence 567788887 65 899999999988999999999 99988887765533211 1111 01111 22333
Q ss_pred CCCC-CCcCcccCCCCC------CCCCCCCchHHHHHHH--------HhhccCcceeeeccccccchhhHHHhhhhcCCc
Q 048238 88 EFPW-IKITKKDFDPPI------TDPEPKGPQFELFIDQ--------IVSTSNSYGMIVNSFYELEPLFADHCNRVVKPK 152 (395)
Q Consensus 88 ~lp~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~--------~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~ 152 (395)
++.. |++..|...... ..........++..+. .+...+.+.+++|+.+.++.+ ++++|+
T Consensus 193 ~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~------rp~~p~ 266 (507)
T PHA03392 193 SKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN------RPVPPS 266 (507)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC------CCCCCC
Confidence 2222 443333211100 0000001122222222 233456778999998877754 367899
Q ss_pred ccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEeccccc---CCHHHHHHHHHHHHhCCCcEEEEEc
Q 048238 153 SWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAE---ISAQQLKEIATGLEQSKVNFLWVIR 229 (395)
Q Consensus 153 ~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~---~~~~~~~~l~~~l~~~~~~~i~~~~ 229 (395)
+++|||++.+..+. +++++++.+|++++ ++++|||||||+.. .+.+.++.+++++++.+.+|||+++
T Consensus 267 v~~vGgi~~~~~~~-------~~l~~~l~~fl~~~---~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~ 336 (507)
T PHA03392 267 VQYLGGLHLHKKPP-------QPLDDYLEEFLNNS---TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYD 336 (507)
T ss_pred eeeecccccCCCCC-------CCCCHHHHHHHhcC---CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEEC
Confidence 99999998754221 45789999999986 56899999999853 5678999999999999999999998
Q ss_pred CCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhce
Q 048238 230 KAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKV 309 (395)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~ 309 (395)
.... + ...++|+.+.+|+||.++|+|+.+++||||||+||++||+++|||+|++|+++||+.||+++++. |+
T Consensus 337 ~~~~--~-----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~-G~ 408 (507)
T PHA03392 337 GEVE--A-----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVEL-GI 408 (507)
T ss_pred CCcC--c-----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHc-Cc
Confidence 6311 1 11357999999999999999999999999999999999999999999999999999999999888 99
Q ss_pred EEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 310 ALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 310 g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
|+.+++ .+++.++|.++|+++++|+ +|++||+++++.+++. . -+..+.+-..++++.+++
T Consensus 409 G~~l~~------~~~t~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~---p-~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 409 GRALDT------VTVSAAQLVLAIVDVIENP---KYRKNLKELRHLIRHQ---P-MTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred EEEecc------CCcCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhC---C-CCHHHHHHHHHHHHHhCC
Confidence 999997 6899999999999999998 8999999999999853 2 223344556677776665
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=1.4e-42 Score=351.27 Aligned_cols=221 Identities=25% Similarity=0.396 Sum_probs=157.3
Q ss_pred CcceeeeccccccchhhHHHhhhhcCCcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEeccccc
Q 048238 125 NSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAE 204 (395)
Q Consensus 125 ~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~ 204 (395)
+.+.+++|+.+.++ ++++ ++|++++||+++..+. ++++.++..|++.. .++++|||||||+..
T Consensus 226 ~~~l~l~ns~~~ld-----~prp-~~p~v~~vGgl~~~~~---------~~l~~~~~~~~~~~--~~~~vv~vsfGs~~~ 288 (500)
T PF00201_consen 226 NASLVLINSHPSLD-----FPRP-LLPNVVEVGGLHIKPA---------KPLPEELWNFLDSS--GKKGVVYVSFGSIVS 288 (500)
T ss_dssp HHHHCCSSTEEE---------HH-HHCTSTTGCGC-S-------------TCHHHHHHHTSTT--TTTEEEEEE-TSSST
T ss_pred HHHHHhhhccccCc-----CCcc-hhhcccccCccccccc---------cccccccchhhhcc--CCCCEEEEecCcccc
Confidence 34456777766555 3343 4689999999987654 45889999999984 478999999999975
Q ss_pred -CCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhc
Q 048238 205 -ISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICA 283 (395)
Q Consensus 205 -~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~ 283 (395)
++.+..++++++|++.+++|||++++. .+.. .++|+.+.+|+||.+||+|+++++||||||+||++||+++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~iW~~~~~---~~~~-----l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~ 360 (500)
T PF00201_consen 289 SMPEEKLKEIAEAFENLPQRFIWKYEGE---PPEN-----LPKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYH 360 (500)
T ss_dssp T-HHHHHHHHHHHHHCSTTEEEEEETCS---HGCH-----HHTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHC
T ss_pred hhHHHHHHHHHHHHhhCCCccccccccc---cccc-----ccceEEEeccccchhhhhcccceeeeeccccchhhhhhhc
Confidence 445668999999999999999999873 1111 1268999999999999999999999999999999999999
Q ss_pred CCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhC
Q 048238 284 GVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEE 363 (395)
Q Consensus 284 GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~ 363 (395)
|||||++|+++||+.||+++++. |+|+.++. .+++.++|.++|+++|+|+ +|++||+++++++++....
T Consensus 361 gvP~l~~P~~~DQ~~na~~~~~~-G~g~~l~~------~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~~~p~~- 429 (500)
T PF00201_consen 361 GVPMLGIPLFGDQPRNAARVEEK-GVGVVLDK------NDLTEEELRAAIREVLENP---SYKENAKRLSSLFRDRPIS- 429 (500)
T ss_dssp T--EEE-GCSTTHHHHHHHHHHT-TSEEEEGG------GC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT------
T ss_pred cCCccCCCCcccCCccceEEEEE-eeEEEEEe------cCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHhcCCCC-
Confidence 99999999999999999999998 99999997 7899999999999999998 8999999999999964332
Q ss_pred CCchHHHHHHHHHHHHHhhhh
Q 048238 364 KGSSWRCLDMLLDETCKYEQQ 384 (395)
Q Consensus 364 ~g~~~~~~~~l~~~~~~~~~~ 384 (395)
..+.+...+|++.+++..
T Consensus 430 ---p~~~~~~~ie~v~~~~~~ 447 (500)
T PF00201_consen 430 ---PLERAVWWIEYVARHGGA 447 (500)
T ss_dssp ---------------------
T ss_pred ---HHHHHHHHHHHHHhcCCC
Confidence 344556677777775433
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=9.3e-35 Score=293.81 Aligned_cols=327 Identities=28% Similarity=0.390 Sum_probs=208.2
Q ss_pred CccEEEECCchhhHHHHHHHcC-CCcEEEecchHHHHHHHHhh-hhccCCCCCCCCCCccCCCCCCCCCcCcccCCCCCC
Q 048238 27 HVSFMVSDGFLWWTLDSANKFG-FPRFVFYGMNNYVMCVSSSV-GANRSLSGVQSDDELVTPPEFPWIKITKKDFDPPIT 104 (395)
Q Consensus 27 kpD~vI~D~~~~~~~~~A~~lg-IP~i~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~p~lp~~~~~~~~~~~~~~ 104 (395)
++|++|+|.+..|...+|.... |+..++.+.+.......... ..++|.......++...+++... .+....++....
T Consensus 114 ~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~-n~~~~~~~~~~~ 192 (496)
T KOG1192|consen 114 KFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSYVPSPFSLSSGDDMSFPERVP-NLIKKDLPSFLF 192 (496)
T ss_pred CccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccccCcccCccccccCcHHHHHH-HHHHHHHHHHHH
Confidence 4999999998778888887775 89888887776554333211 11222210000000000000000 000001111110
Q ss_pred CCCCCCchHHHHHHHHhh----ccCcceeeecc-ccccchhhHHHh-hhhcCCcccccCCCcccCCCCCCCCCCCCCCch
Q 048238 105 DPEPKGPQFELFIDQIVS----TSNSYGMIVNS-FYELEPLFADHC-NRVVKPKSWCVGPLCLAELSPKNEEPKNELSKP 178 (395)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~----~~~~~~vlins-~~~le~~~~~~~-~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~ 178 (395)
.................. ....+.++.++ +..+++...... .....+++++|||++..... . ...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~~~~~~~~~~~~v~~IG~l~~~~~~--------~-~~~ 263 (496)
T KOG1192|consen 193 SLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPLLDFEPRPLLPKVIPIGPLHVKDSK--------Q-KSP 263 (496)
T ss_pred HHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcccCCCCCCCCCCceEECcEEecCcc--------c-ccc
Confidence 000000001111111110 11222344444 555555444333 23346999999999987432 1 111
Q ss_pred HHHHHhhhccCCCC--CeeEEEecccc---cCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCc-cchhHHHHhcCCCeEEe
Q 048238 179 AWIRWLDRKLDEGS--SVMYVAFGSQA---EISAQQLKEIATGLEQS-KVNFLWVIRKAESE-LGDGFEERVKGRGLVVR 251 (395)
Q Consensus 179 ~l~~~l~~~~~~~~--~vv~vs~Gs~~---~~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~ 251 (395)
.+.+|++.. +.. ++|||||||+. .++.++..+++.+|+.. +++|+|++...... +++++.++ ...|++..
T Consensus 264 ~~~~wl~~~--~~~~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~~~~~~~~~~-~~~nV~~~ 340 (496)
T KOG1192|consen 264 LPLEWLDIL--DESRHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDDSIYFPEGLPNR-GRGNVVLS 340 (496)
T ss_pred ccHHHHHHH--hhccCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCcchhhhhcCCCC-CcCceEEe
Confidence 466677665 444 99999999998 78999999999999998 88999999874221 33333322 23578888
Q ss_pred cCCCHHHH-hcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHH
Q 048238 252 DWVNQKEI-LWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLE 330 (395)
Q Consensus 252 ~~~pq~~l-l~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~ 330 (395)
+|+||.++ |+|+++++|||||||||++|++++|||||++|+++||+.||+++++++++++... .+.+.+.+.
T Consensus 341 ~W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~-------~~~~~~~~~ 413 (496)
T KOG1192|consen 341 KWAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK-------RDLVSEELL 413 (496)
T ss_pred cCCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh-------hhcCcHHHH
Confidence 99999998 6999999999999999999999999999999999999999999999955555544 456665699
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 331 KTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 331 ~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
+++.++++++ +|+++++++++..++ +. .+. +.+...++.+..+
T Consensus 414 ~~~~~il~~~---~y~~~~~~l~~~~~~---~p-~~~-~~~~~~~e~~~~~ 456 (496)
T KOG1192|consen 414 EAIKEILENE---EYKEAAKRLSEILRD---QP-ISP-ELAVKWVEFVARH 456 (496)
T ss_pred HHHHHHHcCh---HHHHHHHHHHHHHHc---CC-CCH-HHHHHHHHHHHhc
Confidence 9999999998 899999999999983 34 444 4444444555553
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=7e-32 Score=264.86 Aligned_cols=302 Identities=18% Similarity=0.202 Sum_probs=203.5
Q ss_pred HhcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccCCCCCC-
Q 048238 12 KLMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVTPPEFP- 90 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~lp- 90 (395)
..+.+.+.+++++. +||+||+|.+++++..+|+.+|||+|.+++...... .. +...+.+.
T Consensus 78 ~~~~~~l~~~~~~~-~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~-------~~-----------~~~~~~~~~ 138 (392)
T TIGR01426 78 EDVLPQLEEAYKGD-RPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANE-------EF-----------EEMVSPAGE 138 (392)
T ss_pred HHHHHHHHHHhcCC-CCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccc-------cc-----------cccccccch
Confidence 33445667777777 999999999988999999999999998865422110 00 00000000
Q ss_pred CCCcCcccCCCCCCCCCCCCchHHHHHHHHhhc--------cCcceeeeccccccchhhHHHhhhhcCCcccccCCCccc
Q 048238 91 WIKITKKDFDPPITDPEPKGPQFELFIDQIVST--------SNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLA 162 (395)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~ 162 (395)
.+..........+.. ....+.+++.+..-.. ...+..+..+ ++.+.+....++++++++||+...
T Consensus 139 ~~~~~~~~~~~~~~~--~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~-----~~~l~~~~~~~~~~~~~~Gp~~~~ 211 (392)
T TIGR01426 139 GSAEEGAIAERGLAE--YVARLSALLEEHGITTPPVEFLAAPRRDLNLVYT-----PKAFQPAGETFDDSFTFVGPCIGD 211 (392)
T ss_pred hhhhhhccccchhHH--HHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeC-----ChHhCCCccccCCCeEEECCCCCC
Confidence 000000000000000 0001111111111000 0111122222 344444445678899999998765
Q ss_pred CCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHH
Q 048238 163 ELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEER 242 (395)
Q Consensus 163 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (395)
... ...|.... .++++|||++||+.......+..+++++...+.+++|.+++... ...+.
T Consensus 212 ~~~--------------~~~~~~~~--~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~-- 271 (392)
T TIGR01426 212 RKE--------------DGSWERPG--DGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG-- 271 (392)
T ss_pred ccc--------------cCCCCCCC--CCCCEEEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc--
Confidence 322 11266554 57899999999986666678889999999999999999876311 11111
Q ss_pred hcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcC
Q 048238 243 VKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRG 322 (395)
Q Consensus 243 ~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~ 322 (395)
..+.|+.+.+|+|+.++|+++++ +|||||+||++|++++|+|+|++|...||+.||+++++. |+|..+.. .
T Consensus 272 ~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~-g~g~~l~~------~ 342 (392)
T TIGR01426 272 ELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGADQPMTARRIAEL-GLGRHLPP------E 342 (392)
T ss_pred cCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCcccHHHHHHHHHHC-CCEEEecc------c
Confidence 12468999999999999999998 999999999999999999999999999999999999877 99999885 6
Q ss_pred ccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHH
Q 048238 323 FVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLD 376 (395)
Q Consensus 323 ~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~ 376 (395)
.++.++|.++|++++.|+ +|+++++++++.++.. ++..++.+.+.+
T Consensus 343 ~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~~-----~~~~~aa~~i~~ 388 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDP---RYAERLRKMRAEIREA-----GGARRAADEIEG 388 (392)
T ss_pred cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHc-----CCHHHHHHHHHH
Confidence 789999999999999988 8999999999999742 334444444443
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=1.5e-30 Score=256.25 Aligned_cols=180 Identities=18% Similarity=0.166 Sum_probs=144.8
Q ss_pred hhcCCcccccC-CCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCC-HHHHHHHHHHHHhCCCcE
Q 048238 147 RVVKPKSWCVG-PLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEIS-AQQLKEIATGLEQSKVNF 224 (395)
Q Consensus 147 ~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~~~~~~ 224 (395)
..++++..++| ++...+.. ...+.++..|++.. +++|||++||+.... ......+++++...+.++
T Consensus 205 ~~~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~~~~----~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~ 272 (401)
T cd03784 205 PDWPRFDLVTGYGFRDVPYN--------GPPPPELWLFLAAG----RPPVYVGFGSMVVRDPEALARLDVEAVATLGQRA 272 (401)
T ss_pred CCccccCcEeCCCCCCCCCC--------CCCCHHHHHHHhCC----CCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeE
Confidence 35567777775 44433222 23567888998765 899999999997644 467788889999889999
Q ss_pred EEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHh
Q 048238 225 LWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVT 304 (395)
Q Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~ 304 (395)
||.++...... ...++|+.+.+|+||.++|.++++ ||||||+||++|++++|||+|++|+..||+.||++++
T Consensus 273 i~~~g~~~~~~------~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~ 344 (401)
T cd03784 273 ILSLGWGGLGA------EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVA 344 (401)
T ss_pred EEEccCccccc------cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHH
Confidence 99998742110 123479999999999999999999 9999999999999999999999999999999999998
Q ss_pred hhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Q 048238 305 EEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIAR 357 (395)
Q Consensus 305 ~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 357 (395)
+. |+|+.+.. ..++.++|.++|+++++++ ++++++++++.++
T Consensus 345 ~~-G~g~~l~~------~~~~~~~l~~al~~~l~~~----~~~~~~~~~~~~~ 386 (401)
T cd03784 345 EL-GAGPALDP------RELTAERLAAALRRLLDPP----SRRRAAALLRRIR 386 (401)
T ss_pred HC-CCCCCCCc------ccCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHH
Confidence 77 99999986 5689999999999999854 5566666666664
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-28 Score=238.89 Aligned_cols=192 Identities=23% Similarity=0.324 Sum_probs=158.6
Q ss_pred cCCcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048238 149 VKPKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVI 228 (395)
Q Consensus 149 ~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~ 228 (395)
+|....++||+...+.. +...|.. .++++||||+||.... .+.+..+++++...+.+||+.+
T Consensus 211 ~p~~~~~~~~~~~~~~~-------------~~~~~~~----~d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~ 272 (406)
T COG1819 211 LPFIGPYIGPLLGEAAN-------------ELPYWIP----ADRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSL 272 (406)
T ss_pred CCCCcCccccccccccc-------------cCcchhc----CCCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEec
Confidence 35567777777755432 2333333 3589999999999876 8889999999999999999998
Q ss_pred cCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhc
Q 048238 229 RKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIK 308 (395)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg 308 (395)
+...... ...+.|+.+.+|+||.++|.++++ ||||||+||++||+++|||+|++|...||+.||.++++. |
T Consensus 273 ~~~~~~~------~~~p~n~~v~~~~p~~~~l~~ad~--vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~-G 343 (406)
T COG1819 273 GGARDTL------VNVPDNVIVADYVPQLELLPRADA--VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEEL-G 343 (406)
T ss_pred ccccccc------ccCCCceEEecCCCHHHHhhhcCE--EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHc-C
Confidence 7621111 123469999999999999999999 999999999999999999999999999999999999777 9
Q ss_pred eEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 309 VALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
+|+.+.. ..++.+.++++|+++|+++ +|+++++++++.+++. . | .+.++++++.+...+
T Consensus 344 ~G~~l~~------~~l~~~~l~~av~~vL~~~---~~~~~~~~~~~~~~~~---~-g--~~~~a~~le~~~~~~ 402 (406)
T COG1819 344 AGIALPF------EELTEERLRAAVNEVLADD---SYRRAAERLAEEFKEE---D-G--PAKAADLLEEFAREK 402 (406)
T ss_pred CceecCc------ccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHhhhc---c-c--HHHHHHHHHHHHhcc
Confidence 9999997 7899999999999999998 8999999999999843 3 3 456777777765543
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.80 E-value=7.8e-18 Score=162.41 Aligned_cols=173 Identities=21% Similarity=0.236 Sum_probs=123.9
Q ss_pred CcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCH-HHHHHHHHHHHhCCCcEEEEEc
Q 048238 151 PKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISA-QQLKEIATGLEQSKVNFLWVIR 229 (395)
Q Consensus 151 ~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~-~~~~~l~~~l~~~~~~~i~~~~ 229 (395)
.+++++|+-...... ........+.+.-. +++++|+|..||.+.... +.+.+++..+. .+.+++|++|
T Consensus 154 ~k~~~tG~Pvr~~~~--------~~~~~~~~~~~~l~--~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G 222 (352)
T PRK12446 154 EKVIYTGSPVREEVL--------KGNREKGLAFLGFS--RKKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCG 222 (352)
T ss_pred CCeEEECCcCCcccc--------cccchHHHHhcCCC--CCCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeC
Confidence 578899976654321 11122222223322 468999999999986443 44555555553 2488999999
Q ss_pred CCCCccchhHHHHh-cCCCeEEecCC-C-HHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCC-----CchhHHHH
Q 048238 230 KAESELGDGFEERV-KGRGLVVRDWV-N-QKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIM-----ADQPLNAR 301 (395)
Q Consensus 230 ~~~~~~~~~~~~~~-~~~~~~~~~~~-p-q~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~-----~DQ~~na~ 301 (395)
.. .+++.. ...++.+.+|+ + ..++++++|+ +|||||.+|++|++++|+|+|++|+. .||..||+
T Consensus 223 ~~------~~~~~~~~~~~~~~~~f~~~~m~~~~~~adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~ 294 (352)
T PRK12446 223 KG------NLDDSLQNKEGYRQFEYVHGELPDILAITDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAE 294 (352)
T ss_pred Cc------hHHHHHhhcCCcEEecchhhhHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHH
Confidence 74 121111 11355566887 4 5579999999 99999999999999999999999984 48999999
Q ss_pred HHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHH
Q 048238 302 MVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKE 351 (395)
Q Consensus 302 ~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~ 351 (395)
.+++. |+|..+.. .+++++.|.+++.++++|++ .+++++++
T Consensus 295 ~l~~~-g~~~~l~~------~~~~~~~l~~~l~~ll~~~~--~~~~~~~~ 335 (352)
T PRK12446 295 SFERQ-GYASVLYE------EDVTVNSLIKHVEELSHNNE--KYKTALKK 335 (352)
T ss_pred HHHHC-CCEEEcch------hcCCHHHHHHHHHHHHcCHH--HHHHHHHH
Confidence 99888 99999985 78899999999999998763 55554443
No 29
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.79 E-value=1.6e-17 Score=158.42 Aligned_cols=230 Identities=18% Similarity=0.188 Sum_probs=153.9
Q ss_pred hcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccCCCCCCCC
Q 048238 13 LMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVTPPEFPWI 92 (395)
Q Consensus 13 ~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~lp~~ 92 (395)
.....+.+++++. +||+||+|. .+.+..+|+..|||++.+........ +...
T Consensus 81 ~~~~~~~~~l~~~-~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~~~------------------------~~~~-- 132 (318)
T PF13528_consen 81 RRIRREIRWLREF-RPDLVISDF-YPLAALAARRAGIPVIVISNQYWFLH------------------------PNFW-- 132 (318)
T ss_pred HHHHHHHHHHHhc-CCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHccc------------------------ccCC--
Confidence 3445566677887 999999997 44466789999999998877543110 0000
Q ss_pred CcCcccCCCCCCCCCCCCchHHHHHHHHhh--ccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcccCCCCCCCC
Q 048238 93 KITKKDFDPPITDPEPKGPQFELFIDQIVS--TSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAELSPKNEE 170 (395)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~ 170 (395)
+.. ......++.+.... ...++..+.-+++-.. ....++.++||+..++...
T Consensus 133 -~~~------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~~p~~~~~~~~---- 186 (318)
T PF13528_consen 133 -LPW------------DQDFGRLIERYIDRYHFPPADRRLALSFYPPL---------PPFFRVPFVGPIIRPEIRE---- 186 (318)
T ss_pred -cch------------hhhHHHHHHHhhhhccCCcccceecCCccccc---------cccccccccCchhcccccc----
Confidence 000 00122222222221 2334444443333100 1124567789888654321
Q ss_pred CCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCccchhHHHHhcCCCeE
Q 048238 171 PKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSK-VNFLWVIRKAESELGDGFEERVKGRGLV 249 (395)
Q Consensus 171 ~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 249 (395)
.+ . .+++.|+|++|+.... .++++++..+ +.|++. |... .....+|+.
T Consensus 187 -----~~-------~----~~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~--------~~~~~~ni~ 235 (318)
T PF13528_consen 187 -----LP-------P----EDEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA--------ADPRPGNIH 235 (318)
T ss_pred -----cC-------C----CCCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc--------ccccCCCEE
Confidence 10 1 2367899999998653 5566666655 677666 5531 111257999
Q ss_pred EecCC--CHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccC--CCchhHHHHHHhhhhceEEEeeccCCCCcCccC
Q 048238 250 VRDWV--NQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPI--MADQPLNARMVTEEIKVALRVETCDGSVRGFVK 325 (395)
Q Consensus 250 ~~~~~--pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~--~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~ 325 (395)
+..+. ...++|+.+++ +|||||+||++|++++|+|+|++|. +.||..||+++.+. |+|..++. .+++
T Consensus 236 ~~~~~~~~~~~~m~~ad~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~-G~~~~~~~------~~~~ 306 (318)
T PF13528_consen 236 VRPFSTPDFAELMAAADL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEEL-GLGIVLSQ------EDLT 306 (318)
T ss_pred EeecChHHHHHHHHhCCE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHC-CCeEEccc------ccCC
Confidence 98887 35679999999 9999999999999999999999999 78999999999777 99999986 7899
Q ss_pred HHHHHHHHHHH
Q 048238 326 WQGLEKTVREL 336 (395)
Q Consensus 326 ~~~l~~~i~~~ 336 (395)
++.|+++|+++
T Consensus 307 ~~~l~~~l~~~ 317 (318)
T PF13528_consen 307 PERLAEFLERL 317 (318)
T ss_pred HHHHHHHHhcC
Confidence 99999999764
No 30
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.71 E-value=1.6e-15 Score=145.29 Aligned_cols=138 Identities=17% Similarity=0.261 Sum_probs=110.7
Q ss_pred CCCeeEEEecccccCC-HHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCC-eEEecCCCHH-HHhcccCccc
Q 048238 191 GSSVMYVAFGSQAEIS-AQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRG-LVVRDWVNQK-EILWHESVQG 267 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pq~-~ll~~~~~~~ 267 (395)
++++|+|..||++... ++.+.++...+.+ +..+++.+|... .+.........| +.+..|..+. .+++.+|+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~---~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADL-- 255 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND---LEELKSAYNELGVVRVLPFIDDMAALLAAADL-- 255 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch---HHHHHHHHhhcCcEEEeeHHhhHHHHHHhccE--
Confidence 5899999999997644 3555555555544 688999998741 223333333344 7788888754 59999999
Q ss_pred eeecCCchhHHHHHhcCCcEEeccC-C---CchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 268 FLSHCGWNSALESICAGVPILAWPI-M---ADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~P~-~---~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+||++|++|+.|++++|+|+|.+|+ . .||..||+.++++ |+|..+.. .+++.+.+.+.|.+++.+++
T Consensus 256 vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~-gaa~~i~~------~~lt~~~l~~~i~~l~~~~~ 326 (357)
T COG0707 256 VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKA-GAALVIRQ------SELTPEKLAELILRLLSNPE 326 (357)
T ss_pred EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhC-CCEEEecc------ccCCHHHHHHHHHHHhcCHH
Confidence 9999999999999999999999998 3 4899999999999 99999996 78999999999999998753
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.69 E-value=2.1e-15 Score=144.12 Aligned_cols=124 Identities=17% Similarity=0.243 Sum_probs=90.8
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCC-cEEEEEcCCCCccchhHHHHhcCCCeEEecCCC--HHHHhcccCccc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKV-NFLWVIRKAESELGDGFEERVKGRGLVVRDWVN--QKEILWHESVQG 267 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--q~~ll~~~~~~~ 267 (395)
+++.|+|.+|+... ..+++++.+.+. .|+ ++... ..... ...|+.+.+|.| ..++|+.+++
T Consensus 187 ~~~~iLv~~g~~~~------~~l~~~l~~~~~~~~i--~~~~~-~~~~~-----~~~~v~~~~~~~~~~~~~l~~ad~-- 250 (321)
T TIGR00661 187 GEDYILVYIGFEYR------YKILELLGKIANVKFV--CYSYE-VAKNS-----YNENVEIRRITTDNFKELIKNAEL-- 250 (321)
T ss_pred CCCcEEEECCcCCH------HHHHHHHHhCCCeEEE--EeCCC-CCccc-----cCCCEEEEECChHHHHHHHHhCCE--
Confidence 35778888888642 345666766553 443 22211 11111 136888889997 4568899888
Q ss_pred eeecCCchhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 268 FLSHCGWNSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+|||||++|++|++++|+|++++|..+ ||..||+.+++. |+|+.++. .++ ++.+++.++++|+
T Consensus 251 vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~-g~~~~l~~------~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 251 VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDL-GCGIALEY------KEL---RLLEAILDIRNMK 315 (321)
T ss_pred EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHC-CCEEEcCh------hhH---HHHHHHHhccccc
Confidence 999999999999999999999999954 899999999888 99999985 444 5566666677666
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.52 E-value=2.3e-15 Score=129.94 Aligned_cols=135 Identities=19% Similarity=0.293 Sum_probs=97.6
Q ss_pred eeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHhc--CCCeEEecCCC-HHHHhcccCccc
Q 048238 194 VMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERVK--GRGLVVRDWVN-QKEILWHESVQG 267 (395)
Q Consensus 194 vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p-q~~ll~~~~~~~ 267 (395)
+|+|+.||..... .+.+..+...+.. ....|++++|... ......... +.++.+.+|.+ ..++++.+|+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~---~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDl-- 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNN---YEELKIKVENFNPNVKVFGFVDNMAELMAAADL-- 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCE---CHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSE--
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCc---HHHHHHHHhccCCcEEEEechhhHHHHHHHcCE--
Confidence 5899999886521 1222223333332 3578999998741 111111111 26889999999 7789999999
Q ss_pred eeecCCchhHHHHHhcCCcEEeccCCC----chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 268 FLSHCGWNSALESICAGVPILAWPIMA----DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~P~~~----DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+|||||++|++|++++|+|+|++|... +|..||..+++. |+|..+.. ...+.+.|.++|.+++.++
T Consensus 76 vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~-g~~~~~~~------~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKK-GAAIMLDE------SELNPEELAEAIEELLSDP 145 (167)
T ss_dssp EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHC-CCCCCSEC------CC-SCCCHHHHHHCHCCCH
T ss_pred EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHc-CCccccCc------ccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999987 999999999898 99999885 6677999999999999876
No 33
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.51 E-value=2.1e-12 Score=126.76 Aligned_cols=146 Identities=12% Similarity=0.210 Sum_probs=103.2
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHH-Hh-CCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCCH-HHHhcccCc
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGL-EQ-SKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVNQ-KEILWHESV 265 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l-~~-~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq-~~ll~~~~~ 265 (395)
+++++|++..|+.+.. ..+..+++++ +. .+.++++++|.+. .+-+.+.+.. ...++.+.+|+++ .++++.+|+
T Consensus 200 ~~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~-~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl 276 (391)
T PRK13608 200 PDKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK-ELKRSLTAKFKSNENVLILGYTKHMNEWMASSQL 276 (391)
T ss_pred CCCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH-HHHHHHHHHhccCCCeEEEeccchHHHHHHhhhE
Confidence 3567888888988632 2344444443 22 3567777777531 1112232222 2357888899975 469999999
Q ss_pred cceeecCCchhHHHHHhcCCcEEec-cCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh-hH
Q 048238 266 QGFLSHCGWNSALESICAGVPILAW-PIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK-GE 343 (395)
Q Consensus 266 ~~~IthgG~~s~~Ea~~~GvP~i~~-P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~ 343 (395)
+|+.+|..|+.||+++|+|+|+. |..++|..|+..+.+. |+|+... +.+++.++|.++++|++ .+
T Consensus 277 --~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~-G~g~~~~----------~~~~l~~~i~~ll~~~~~~~ 343 (391)
T PRK13608 277 --MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEEK-GFGKIAD----------TPEEAIKIVASLTNGNEQLT 343 (391)
T ss_pred --EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhC-CcEEEeC----------CHHHHHHHHHHHhcCHHHHH
Confidence 99999989999999999999998 7767778899999888 9998654 68889999999998774 23
Q ss_pred HHHHHHHH
Q 048238 344 KARTKVKE 351 (395)
Q Consensus 344 ~~~~~a~~ 351 (395)
++++++++
T Consensus 344 ~m~~~~~~ 351 (391)
T PRK13608 344 NMISTMEQ 351 (391)
T ss_pred HHHHHHHH
Confidence 34444433
No 34
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.50 E-value=5e-12 Score=122.57 Aligned_cols=136 Identities=18% Similarity=0.239 Sum_probs=97.8
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCC--cEEEEEcCCCCccchhHHHHhc-CCCeEEecCCC-HHHHhcccCcc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKV--NFLWVIRKAESELGDGFEERVK-GRGLVVRDWVN-QKEILWHESVQ 266 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~--~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p-q~~ll~~~~~~ 266 (395)
+.++|++..|+..... ....+.+++.+... .+++.+|... . +.+.+... +-++.+.+|+. ..++++.+++
T Consensus 182 ~~~~i~~~gg~~~~~~--~~~~l~~a~~~~~~~~~~~~~~G~g~--~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~- 255 (357)
T PRK00726 182 GKPTLLVVGGSQGARV--LNEAVPEALALLPEALQVIHQTGKGD--L-EEVRAAYAAGINAEVVPFIDDMAAAYAAADL- 255 (357)
T ss_pred CCeEEEEECCcHhHHH--HHHHHHHHHHHhhhCcEEEEEcCCCc--H-HHHHHHhhcCCcEEEeehHhhHHHHHHhCCE-
Confidence 4566776656543211 11222244443222 4566777642 1 23332222 22377888884 5679999999
Q ss_pred ceeecCCchhHHHHHhcCCcEEeccC----CCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 267 GFLSHCGWNSALESICAGVPILAWPI----MADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 267 ~~IthgG~~s~~Ea~~~GvP~i~~P~----~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+|+|+|.++++|++++|+|+|++|. .++|..|+..+.+. |.|..+.. .+++++.+.++|.++++|+
T Consensus 256 -~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~-~~g~~~~~------~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 256 -VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVDA-GAALLIPQ------SDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred -EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHC-CCEEEEEc------ccCCHHHHHHHHHHHHcCH
Confidence 9999999999999999999999997 36899999999888 99999986 5678999999999999987
No 35
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.50 E-value=2.5e-12 Score=124.05 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=101.1
Q ss_pred CCCeeEEEecccccCCH-HHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhc--CCCeEEecCC-CHHHHhcccCcc
Q 048238 191 GSSVMYVAFGSQAEISA-QQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVK--GRGLVVRDWV-NQKEILWHESVQ 266 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~-~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-pq~~ll~~~~~~ 266 (395)
++++|++..|+...... +.+.+.+..+.+.+..+++.+|.. ..+.+.+... ..|+.+.+|+ +..++|+.+++
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g---~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~- 255 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG---DLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADL- 255 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc---cHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCE-
Confidence 45666666666643222 233344455544455667777764 1122332222 3689999998 55679999999
Q ss_pred ceeecCCchhHHHHHhcCCcEEeccC----CCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 267 GFLSHCGWNSALESICAGVPILAWPI----MADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 267 ~~IthgG~~s~~Ea~~~GvP~i~~P~----~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+|+++|.+++.||+++|+|+|+.|. ..+|..|+..+.+. |.|+.+.. +..+.+++.++|++++.++
T Consensus 256 -~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~-g~g~~v~~------~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 256 -VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVKA-GAAVLIPQ------EELTPERLAAALLELLSDP 325 (350)
T ss_pred -EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhC-CCEEEEec------CCCCHHHHHHHHHHHhcCH
Confidence 9999999999999999999999986 36788999999888 99999985 4568999999999999876
No 36
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.49 E-value=2.5e-11 Score=118.90 Aligned_cols=136 Identities=16% Similarity=0.200 Sum_probs=96.0
Q ss_pred CCCCeeEEEecccccCCH-HHHHHHHHHHH-----hCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCH-HHHhcc
Q 048238 190 EGSSVMYVAFGSQAEISA-QQLKEIATGLE-----QSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQ-KEILWH 262 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~-~~~~~l~~~l~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq-~~ll~~ 262 (395)
+++++|++..|+...... ..++.+...+. ..+..+++++|... .+-..+.+.....++.+.+|+++ .++++.
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~~~~v~~~G~~~~~~~l~~a 282 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDWKIPVKVRGFVTNMEEWMGA 282 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcccCCeEEEeccccHHHHHHh
Confidence 456788877777654333 33333333221 23456777887631 11122222222346888899985 569999
Q ss_pred cCccceeecCCchhHHHHHhcCCcEEeccCCCchh-HHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 263 ESVQGFLSHCGWNSALESICAGVPILAWPIMADQP-LNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 263 ~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~-~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
+|+ +|+.+|.+|++||+++|+|+|+.+....|. .|+..+.+. |.|+.+. +++++.++|.+++.+
T Consensus 283 aDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~~-g~g~~~~----------~~~~la~~i~~ll~~ 347 (382)
T PLN02605 283 CDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVDN-GFGAFSE----------SPKEIARIVAEWFGD 347 (382)
T ss_pred CCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHhC-CceeecC----------CHHHHHHHHHHHHcC
Confidence 999 999999999999999999999998766665 699999888 9998653 789999999999987
No 37
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.41 E-value=1.2e-10 Score=113.98 Aligned_cols=135 Identities=17% Similarity=0.289 Sum_probs=98.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCccchhHHHHh--cCCCeEEecCCCH-HHHhcccCcc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQ-SKVNFLWVIRKAESELGDGFEERV--KGRGLVVRDWVNQ-KEILWHESVQ 266 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq-~~ll~~~~~~ 266 (395)
++++|++..|+.... ..+..+++++.+ .+.+++++.|.. ..+.+.+.+.. .+.++.+.+|+++ .++++.+|+
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~-~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~- 276 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKN-EALKQSLEDLQETNPDALKVFGYVENIDELFRVTSC- 276 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCC-HHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccE-
Confidence 467788877887542 234556666654 456777777642 11112232222 2357999999986 469999999
Q ss_pred ceeecCCchhHHHHHhcCCcEEec-cCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 267 GFLSHCGWNSALESICAGVPILAW-PIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 267 ~~IthgG~~s~~Ea~~~GvP~i~~-P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+|+.+|..++.||+++|+|+|+. |..+.+..|+..+.+. |+|+... +.+++.++|.++++|++
T Consensus 277 -~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~~-G~~~~~~----------~~~~l~~~i~~ll~~~~ 340 (380)
T PRK13609 277 -MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFERK-GAAVVIR----------DDEEVFAKTEALLQDDM 340 (380)
T ss_pred -EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHhC-CcEEEEC----------CHHHHHHHHHHHHCCHH
Confidence 99999988999999999999985 6677788899988777 9887553 57899999999998873
No 38
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.36 E-value=6.4e-11 Score=115.88 Aligned_cols=169 Identities=14% Similarity=0.111 Sum_probs=111.0
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHHH---h--CCCcEEEEEcCCCCccchhHHH---Hhc-CCCeEEecCCCHHHHh
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGLE---Q--SKVNFLWVIRKAESELGDGFEE---RVK-GRGLVVRDWVNQKEIL 260 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~---~--~~~~~i~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~pq~~ll 260 (395)
+++++|.+..||....-......+++++. + .+.++++..... .....+.+ ... ...+.+..+ ....++
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l 265 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNF--KRRLQFEQIKAEYGPDLQLHLIDG-DARKAM 265 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCc--hhHHHHHHHHHHhCCCCcEEEECc-hHHHHH
Confidence 45788888888886532333344443333 2 234565544332 11112222 111 122333222 345699
Q ss_pred cccCccceeecCCchhHHHHHhcCCcEEec----cCC---C------chhHHHHHHhhhhceEEEeeccCCCCcCccCHH
Q 048238 261 WHESVQGFLSHCGWNSALESICAGVPILAW----PIM---A------DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQ 327 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~----P~~---~------DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~ 327 (395)
+.+|+ +|+.+|..|+ |++++|+|+|++ |+. . .|..|+..++++ ++...+.. ++++++
T Consensus 266 ~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~-~~~pel~q------~~~~~~ 335 (385)
T TIGR00215 266 FAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR-LLVPELLQ------EECTPH 335 (385)
T ss_pred HhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC-ccchhhcC------CCCCHH
Confidence 99999 9999999888 999999999999 873 1 277799999888 99888875 789999
Q ss_pred HHHHHHHHHhCCC----h-hHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHH
Q 048238 328 GLEKTVRELMGGE----K-GEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLD 376 (395)
Q Consensus 328 ~l~~~i~~~l~~~----~-~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~ 376 (395)
.|.+.+.++++|+ + .+++++...++++.+ .++ |.+.+..+.+++
T Consensus 336 ~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~-~~~~~~a~~i~~ 384 (385)
T TIGR00215 336 PLAIALLLLLENGLKAYKEMHRERQFFEELRQRI----YCN-ADSERAAQAVLE 384 (385)
T ss_pred HHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCC-CHHHHHHHHHhh
Confidence 9999999999987 5 356666666666665 455 656666555543
No 39
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.27 E-value=3.6e-10 Score=108.88 Aligned_cols=139 Identities=18% Similarity=0.238 Sum_probs=91.7
Q ss_pred CCCeeEEEecccccCCH-HHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCe-EEecCC--CHHHHhcccCcc
Q 048238 191 GSSVMYVAFGSQAEISA-QQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGL-VVRDWV--NQKEILWHESVQ 266 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~-~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--pq~~ll~~~~~~ 266 (395)
++++|.+..|+...... +.+...+..+...+..+++..|.. .. +.+.+.....++ .+..|. +..++|+.+|+
T Consensus 178 ~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~--~~-~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~- 253 (348)
T TIGR01133 178 GKPTILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKN--DL-EKVKNVYQELGIEAIVTFIDENMAAAYAAADL- 253 (348)
T ss_pred CCeEEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcc--hH-HHHHHHHhhCCceEEecCcccCHHHHHHhCCE-
Confidence 34555554455542111 112223333433456676666653 11 233332322221 122333 56779999999
Q ss_pred ceeecCCchhHHHHHhcCCcEEeccCC---CchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 267 GFLSHCGWNSALESICAGVPILAWPIM---ADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 267 ~~IthgG~~s~~Ea~~~GvP~i~~P~~---~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+. +.|..+.. ++.+.+.+.+++.++++|++
T Consensus 254 -~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~-~~G~~~~~------~~~~~~~l~~~i~~ll~~~~ 323 (348)
T TIGR01133 254 -VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDL-GAGLVIRQ------KELLPEKLLEALLKLLLDPA 323 (348)
T ss_pred -EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHC-CCEEEEec------ccCCHHHHHHHHHHHHcCHH
Confidence 99999988999999999999999873 5678899999887 99998875 56689999999999998873
No 40
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.18 E-value=7.1e-10 Score=103.68 Aligned_cols=105 Identities=16% Similarity=0.237 Sum_probs=79.3
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCCHH-HHhcccCccc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVNQK-EILWHESVQG 267 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~-~ll~~~~~~~ 267 (395)
.+.|+|+||+..... ....+++++.. .+.++.+++|+... ..+.+.+.. ...|+.+..++++. ++|+.+|+
T Consensus 170 ~~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~-~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl-- 244 (279)
T TIGR03590 170 LRRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP-NLDELKKFAKEYPNIILFIDVENMAELMNEADL-- 244 (279)
T ss_pred cCeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc-CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 367999999876533 33445555554 45678888887522 223343322 24588899999875 69999999
Q ss_pred eeecCCchhHHHHHhcCCcEEeccCCCchhHHHHH
Q 048238 268 FLSHCGWNSALESICAGVPILAWPIMADQPLNARM 302 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~ 302 (395)
+||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 245 ~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 245 AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 999999 9999999999999999999999999975
No 41
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.17 E-value=2.1e-09 Score=105.00 Aligned_cols=152 Identities=13% Similarity=0.122 Sum_probs=85.2
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHH---h--CCCcEEEEEcCCCCccchhHHHHhcC---CCeEEecCCCHHHHhcc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLE---Q--SKVNFLWVIRKAESELGDGFEERVKG---RGLVVRDWVNQKEILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~---~--~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~pq~~ll~~ 262 (395)
++++|++..||...........+++++. + .+..++|+.+.. ...+.+.+.... -++.+.. -.-..+++.
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~ 261 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP--KRREQIEEALAEYAGLEVTLLD-GQKREAMAA 261 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh--hhHHHHHHHHhhcCCCCeEEEc-ccHHHHHHh
Confidence 4566677667664321122333333332 2 245677776532 111223332221 2333322 134679999
Q ss_pred cCccceeecCCchhHHHHHhcCCcEEeccCCCc--------hhHH-----HHHHhhhhceEEEeeccCCCCcCccCHHHH
Q 048238 263 ESVQGFLSHCGWNSALESICAGVPILAWPIMAD--------QPLN-----ARMVTEEIKVALRVETCDGSVRGFVKWQGL 329 (395)
Q Consensus 263 ~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~D--------Q~~n-----a~~v~~~lg~g~~~~~~~~~~~~~~~~~~l 329 (395)
+|+ +|+.+|.+++ |++++|+|+|..|...- |..| +..+.+. +++..+.. ...+++.+
T Consensus 262 aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~------~~~~~~~l 331 (380)
T PRK00025 262 ADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGR-ELVPELLQ------EEATPEKL 331 (380)
T ss_pred CCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCC-CcchhhcC------CCCCHHHH
Confidence 999 9999998887 99999999999965322 1111 1222222 33333332 46789999
Q ss_pred HHHHHHHhCCCh-hHHHHHHHHHHHHH
Q 048238 330 EKTVRELMGGEK-GEKARTKVKELSEI 355 (395)
Q Consensus 330 ~~~i~~~l~~~~-~~~~~~~a~~l~~~ 355 (395)
.+++.++++|++ .++++++++++.+.
T Consensus 332 ~~~i~~ll~~~~~~~~~~~~~~~~~~~ 358 (380)
T PRK00025 332 ARALLPLLADGARRQALLEGFTELHQQ 358 (380)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999999999985 23444444444433
No 42
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.06 E-value=8.5e-08 Score=94.17 Aligned_cols=136 Identities=18% Similarity=0.174 Sum_probs=89.0
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHh----CCCcEEEEEcCCCCccchhHHHHhc------------------CCCe
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQ----SKVNFLWVIRKAESELGDGFEERVK------------------GRGL 248 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~----~~~~~i~~~~~~~~~~~~~~~~~~~------------------~~~~ 248 (395)
++++|.+--||-...-...+..+++++.. .+..|++.+.+. ... ..+.+... ..++
T Consensus 204 ~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~-~~~-~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 281 (396)
T TIGR03492 204 GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPS-LSL-EKLQAILEDLGWQLEGSSEDQTSLFQKGTL 281 (396)
T ss_pred CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCC-CCH-HHHHHHHHhcCceecCCccccchhhccCce
Confidence 46788888888854322233334444333 367888887432 111 12222111 1234
Q ss_pred EEecCCC-HHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhh---hceEEEeeccCCCCcCcc
Q 048238 249 VVRDWVN-QKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEE---IKVALRVETCDGSVRGFV 324 (395)
Q Consensus 249 ~~~~~~p-q~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~---lg~g~~~~~~~~~~~~~~ 324 (395)
.+..+.. ..++++.+++ +||.+|..| .|++..|+|+|.+|.-..|. |+...++. .|.++.+.. .
T Consensus 282 ~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~~~~l~g~~~~l~~--------~ 349 (396)
T TIGR03492 282 EVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEAQSRLLGGSVFLAS--------K 349 (396)
T ss_pred EEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHhhHhhcCCEEecCC--------C
Confidence 4444443 4669999999 999999766 99999999999999877776 98766442 266666652 3
Q ss_pred CHHHHHHHHHHHhCCC
Q 048238 325 KWQGLEKTVRELMGGE 340 (395)
Q Consensus 325 ~~~~l~~~i~~~l~~~ 340 (395)
+.+.|.+++.++++|+
T Consensus 350 ~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 350 NPEQAAQVVRQLLADP 365 (396)
T ss_pred CHHHHHHHHHHHHcCH
Confidence 5599999999999887
No 43
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.91 E-value=6.4e-07 Score=88.99 Aligned_cols=82 Identities=17% Similarity=0.142 Sum_probs=60.1
Q ss_pred HHHhcccCccceeec-----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHH
Q 048238 257 KEILWHESVQGFLSH-----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEK 331 (395)
Q Consensus 257 ~~ll~~~~~~~~Ith-----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~ 331 (395)
..+++.+|+ ++.. +|..++.||+++|+|+|+.|..+++......+.+. |.++... +.+++.+
T Consensus 314 ~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~-g~~~~~~----------d~~~La~ 380 (425)
T PRK05749 314 GLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQA-GAAIQVE----------DAEDLAK 380 (425)
T ss_pred HHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHC-CCeEEEC----------CHHHHHH
Confidence 458888887 4432 34446999999999999999988888777776556 7666543 6899999
Q ss_pred HHHHHhCCCh-hHHHHHHHHH
Q 048238 332 TVRELMGGEK-GEKARTKVKE 351 (395)
Q Consensus 332 ~i~~~l~~~~-~~~~~~~a~~ 351 (395)
+|.++++|++ .+.+.+++++
T Consensus 381 ~l~~ll~~~~~~~~m~~~a~~ 401 (425)
T PRK05749 381 AVTYLLTDPDARQAYGEAGVA 401 (425)
T ss_pred HHHHHhcCHHHHHHHHHHHHH
Confidence 9999998874 2334444433
No 44
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.85 E-value=2.1e-06 Score=82.25 Aligned_cols=130 Identities=17% Similarity=0.191 Sum_probs=86.5
Q ss_pred CCeeEEEeccccc-CCHHHHHHHHHHHHhC-CCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHH---HhcccCcc
Q 048238 192 SSVMYVAFGSQAE-ISAQQLKEIATGLEQS-KVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKE---ILWHESVQ 266 (395)
Q Consensus 192 ~~vv~vs~Gs~~~-~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---ll~~~~~~ 266 (395)
++.+++..|+... ...+.+.+++..+... +..+++.-+.. ....+. ....++.+.+|+++.+ +++.+++
T Consensus 196 ~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~---~~~~~~--~~~~~v~~~g~~~~~~~~~~~~~~d~- 269 (364)
T cd03814 196 DRPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP---ARARLE--ARYPNVHFLGFLDGEELAAAYASADV- 269 (364)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc---hHHHHh--ccCCcEEEEeccCHHHHHHHHHhCCE-
Confidence 3456677777653 2335555555555432 45555443321 111111 2356899999988654 8999999
Q ss_pred ceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 267 GFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 267 ~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+|..+. .++++||+++|+|+|+.+..+ +...+.+. +.|..+.. .+.+++.++|.+++.|++
T Consensus 270 -~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~~-~~g~~~~~--------~~~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 270 -FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTDG-ENGLLVEP--------GDAEAFAAALAALLADPE 334 (364)
T ss_pred -EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcCC-cceEEcCC--------CCHHHHHHHHHHHHcCHH
Confidence 887664 378999999999999987653 44556555 88887763 377889999999998874
No 45
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.84 E-value=7.7e-08 Score=89.23 Aligned_cols=137 Identities=17% Similarity=0.228 Sum_probs=102.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHh-CCCc--EEEEEcCCCCccchhHHHH-----hcCCCeEEecCCCH-HHHhc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQ-SKVN--FLWVIRKAESELGDGFEER-----VKGRGLVVRDWVNQ-KEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~-~~~~--~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~pq-~~ll~ 261 (395)
++--|+||-|.-.. -.+.+...+.|-.. .+.+ .++++|+. .|..-..+ .+.+++.+..|..+ ..+++
T Consensus 218 E~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~---MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~ 293 (400)
T COG4671 218 EGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF---MPEAQRQKLLASAPKRPHISIFEFRNDFESLLA 293 (400)
T ss_pred ccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC---CCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHH
Confidence 34578888776642 23445554544433 4443 77788863 55433222 12478999999875 55999
Q ss_pred ccCccceeecCCchhHHHHHhcCCcEEeccCC---CchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 262 HESVQGFLSHCGWNSALESICAGVPILAWPIM---ADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~---~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
.++. +|+-||+||++|-+++|+|.+++|+. -||-.-|.|+++. |..-.+.. ..++++.++++|...+.
T Consensus 294 gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~L-GL~dvL~p------e~lt~~~La~al~~~l~ 364 (400)
T COG4671 294 GARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEEL-GLVDVLLP------ENLTPQNLADALKAALA 364 (400)
T ss_pred hhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhc-CcceeeCc------ccCChHHHHHHHHhccc
Confidence 9999 99999999999999999999999994 4899999999555 99888886 78999999999999887
Q ss_pred CC
Q 048238 339 GE 340 (395)
Q Consensus 339 ~~ 340 (395)
.+
T Consensus 365 ~P 366 (400)
T COG4671 365 RP 366 (400)
T ss_pred CC
Confidence 33
No 46
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.84 E-value=4.7e-07 Score=88.10 Aligned_cols=130 Identities=12% Similarity=0.227 Sum_probs=80.3
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHhC-----CCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCCH---HHHhcc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQS-----KVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVNQ---KEILWH 262 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~-----~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq---~~ll~~ 262 (395)
+.+++++++-.... .+.+..+++++... +.++++..++. ......+.+.. ...++.+.+.++. ..++++
T Consensus 197 ~~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 274 (365)
T TIGR00236 197 KRYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLN-PVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAAN 274 (365)
T ss_pred CCEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCC-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHh
Confidence 35566554432221 13355566655442 45666654432 11111122222 2357888776664 357788
Q ss_pred cCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 263 ESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 263 ~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+++ +|+-.|. .+.||+++|+|+|.++..++++. +.+. |.++.+.. +.++|.+++.++++++
T Consensus 275 ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~~-g~~~lv~~---------d~~~i~~ai~~ll~~~ 335 (365)
T TIGR00236 275 SHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVEA-GTNKLVGT---------DKENITKAAKRLLTDP 335 (365)
T ss_pred CCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHhc-CceEEeCC---------CHHHHHHHHHHHHhCh
Confidence 888 9998764 47999999999999976665542 2245 77766542 7899999999999877
No 47
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.76 E-value=4.6e-07 Score=86.83 Aligned_cols=151 Identities=17% Similarity=0.102 Sum_probs=89.1
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHH---hCCCcEEEEEcCCCCccchhHHHHhcC-CCeEEecCCCHHHHhcccCccc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLE---QSKVNFLWVIRKAESELGDGFEERVKG-RGLVVRDWVNQKEILWHESVQG 267 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pq~~ll~~~~~~~ 267 (395)
+++|.+--||....-...+-.++++.. +....|++ .+.. .. ..+.+.... ..+.+.+ ...++++.+|+
T Consensus 167 ~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i-~~a~--~~-~~i~~~~~~~~~~~~~~--~~~~~m~~aDl-- 238 (347)
T PRK14089 167 EGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVV-PSFF--KG-KDLKEIYGDISEFEISY--DTHKALLEAEF-- 238 (347)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEE-eCCC--cH-HHHHHHHhcCCCcEEec--cHHHHHHhhhH--
Confidence 478989899986533344443333333 32223333 3221 11 222232211 2333322 34579999999
Q ss_pred eeecCCchhHHHHHhcCCcEEeccC--CCchhHHHHHHhh--hhceEEEeec----cC--C-CCcCccCHHHHHHHHHHH
Q 048238 268 FLSHCGWNSALESICAGVPILAWPI--MADQPLNARMVTE--EIKVALRVET----CD--G-SVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~P~--~~DQ~~na~~v~~--~lg~g~~~~~----~~--~-~~~~~~~~~~l~~~i~~~ 336 (395)
.|+.+|..|+ |++.+|+|||+ +. ..-|+.||+++++ ..|.+-.+-. .. + -..++.|++.|.+++.+.
T Consensus 239 al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~~ 316 (347)
T PRK14089 239 AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKEM 316 (347)
T ss_pred HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHHH
Confidence 9999999999 99999999998 54 3568889999873 1154444420 00 0 013568999999999772
Q ss_pred hCCChhHHHHHHHHHHHHHH
Q 048238 337 MGGEKGEKARTKVKELSEIA 356 (395)
Q Consensus 337 l~~~~~~~~~~~a~~l~~~~ 356 (395)
..+++++...++++.+
T Consensus 317 ----~~~~~~~~~~~l~~~l 332 (347)
T PRK14089 317 ----DREKFFKKSKELREYL 332 (347)
T ss_pred ----HHHHHHHHHHHHHHHh
Confidence 1225666666666665
No 48
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.76 E-value=4.6e-06 Score=83.91 Aligned_cols=140 Identities=14% Similarity=0.171 Sum_probs=90.4
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHhC-CCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHH---HHhcccCccce
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQS-KVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQK---EILWHESVQGF 268 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~ll~~~~~~~~ 268 (395)
..+++..|++.. ...+..++++++.. +..++++-++ ...+.+.+.....++.+.++++.. .+++.+|+ |
T Consensus 263 ~~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~ivG~G---~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv--~ 335 (465)
T PLN02871 263 KPLIVYVGRLGA--EKNLDFLKRVMERLPGARLAFVGDG---PYREELEKMFAGTPTVFTGMLQGDELSQAYASGDV--F 335 (465)
T ss_pred CeEEEEeCCCch--hhhHHHHHHHHHhCCCcEEEEEeCC---hHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCE--E
Confidence 345566687753 23455566666654 5565544332 122334444455689999999754 48889999 8
Q ss_pred eecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhh---hhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 269 LSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTE---EIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 269 IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~---~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
|.-.. ..+++||+++|+|+|+....+ ....+.+ . +.|+.++. -+.+++.++|.++++|++
T Consensus 336 V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~-~~G~lv~~--------~d~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 336 VMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEG-KTGFLYTP--------GDVDDCVEKLETLLADPE 402 (465)
T ss_pred EECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCC-CceEEeCC--------CCHHHHHHHHHHHHhCHH
Confidence 76543 346889999999999876432 2333433 4 78888864 378999999999998874
Q ss_pred -hHHHHHHHHHH
Q 048238 342 -GEKARTKVKEL 352 (395)
Q Consensus 342 -~~~~~~~a~~l 352 (395)
.+.+.+++++.
T Consensus 403 ~~~~~~~~a~~~ 414 (465)
T PLN02871 403 LRERMGAAAREE 414 (465)
T ss_pred HHHHHHHHHHHH
Confidence 23455555443
No 49
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.59 E-value=2.5e-05 Score=74.11 Aligned_cols=252 Identities=14% Similarity=0.058 Sum_probs=136.4
Q ss_pred cHHHHHHHHhcCCCccEEEECCchhhHH--HHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccCCCCCCC
Q 048238 14 MQPHFERALESLPHVSFMVSDGFLWWTL--DSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVTPPEFPW 91 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~~~~~~~--~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~lp~ 91 (395)
....+..++++. +||+|++........ .++...++|++..........
T Consensus 73 ~~~~~~~~~~~~-~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~----------------------------- 122 (374)
T cd03801 73 LALRLRRLLRRE-RFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGR----------------------------- 122 (374)
T ss_pred HHHHHHHHhhhc-CCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhc-----------------------------
Confidence 345566777777 999999998666444 477888999887654321100
Q ss_pred CCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcC---CcccccCCCcccCCCCCC
Q 048238 92 IKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVK---PKSWCVGPLCLAELSPKN 168 (395)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~---~~~~~vGpl~~~~~~~~~ 168 (395)
.... . .................++.+++.+-... +......+ .++..+..-.....-
T Consensus 123 --~~~~-------~---~~~~~~~~~~~~~~~~~~d~~i~~s~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~--- 182 (374)
T cd03801 123 --PGNE-------L---GLLLKLARALERRALRRADRIIAVSEATR-----EELRELGGVPPEKITVIPNGVDTERF--- 182 (374)
T ss_pred --cccc-------h---hHHHHHHHHHHHHHHHhCCEEEEecHHHH-----HHHHhcCCCCCCcEEEecCccccccc---
Confidence 0000 0 00011111122333456777777664332 22222222 245555543322111
Q ss_pred CCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccC-CHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHH----
Q 048238 169 EEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEI-SAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEE---- 241 (395)
Q Consensus 169 ~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~---- 241 (395)
.........-... ..++..++.+|+.... ..+.+...+..+... +..+++ +|.. .....+.+
T Consensus 183 -----~~~~~~~~~~~~~---~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i-~G~~--~~~~~~~~~~~~ 251 (374)
T cd03801 183 -----RPAPRAARRRLGI---PEDEPVILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVI-VGDG--PLREELEALAAE 251 (374)
T ss_pred -----CccchHHHhhcCC---cCCCeEEEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEE-EeCc--HHHHHHHHHHHH
Confidence 0000111111111 2345666777877532 223333333333332 344443 3431 11112221
Q ss_pred HhcCCCeEEecCCCHH---HHhcccCccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEee
Q 048238 242 RVKGRGLVVRDWVNQK---EILWHESVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVE 314 (395)
Q Consensus 242 ~~~~~~~~~~~~~pq~---~ll~~~~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~ 314 (395)
.....++.+.+++++. .++..+++ +|.- |..+++.||+++|+|+|+.+. ......+.+. +.|+.++
T Consensus 252 ~~~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~~-~~g~~~~ 324 (374)
T cd03801 252 LGLGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVEDG-ETGLLVP 324 (374)
T ss_pred hCCCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcCC-cceEEeC
Confidence 1245688899999643 48889998 6632 445789999999999999765 3345555445 7788776
Q ss_pred ccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 315 TCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
. .+.+++.++|.+++++++
T Consensus 325 ~--------~~~~~l~~~i~~~~~~~~ 343 (374)
T cd03801 325 P--------GDPEALAEAILRLLDDPE 343 (374)
T ss_pred C--------CCHHHHHHHHHHHHcChH
Confidence 4 358999999999998874
No 50
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.58 E-value=2.4e-05 Score=75.18 Aligned_cols=143 Identities=19% Similarity=0.164 Sum_probs=88.4
Q ss_pred CCCeeEEEeccccc-CCHHHHHHHHHHHHhC-CCcEEEEEcCCCCccchhHHH---HhcCCCeEEecCCCHHH---Hhcc
Q 048238 191 GSSVMYVAFGSQAE-ISAQQLKEIATGLEQS-KVNFLWVIRKAESELGDGFEE---RVKGRGLVVRDWVNQKE---ILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~-~~~~~~~~l~~~l~~~-~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~pq~~---ll~~ 262 (395)
.++.+++..|+... ...+.+.+.+..+... +..+++. |.. .....+.+ .....|+.+.+++++.+ +++.
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~-G~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIV-GDG--PEKEELKELAKALGLDNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEe-CCc--ccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHh
Confidence 35667777888754 2335555555555443 5555444 432 11122222 23457899989997554 7888
Q ss_pred cCccceeecCC---------chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 263 ESVQGFLSHCG---------WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 263 ~~~~~~IthgG---------~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
+++ +|.... -+++.||+++|+|+|+.+..+.+... .+. +.|..++. -+.+++.++|
T Consensus 295 ~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~----~~~-~~g~~~~~--------~~~~~l~~~i 359 (394)
T cd03794 295 ADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELV----EEA-GAGLVVPP--------GDPEALAAAI 359 (394)
T ss_pred hCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhh----ccC-CcceEeCC--------CCHHHHHHHH
Confidence 998 664332 23479999999999999876554332 233 66777763 3789999999
Q ss_pred HHHhCCCh-hHHHHHHHHH
Q 048238 334 RELMGGEK-GEKARTKVKE 351 (395)
Q Consensus 334 ~~~l~~~~-~~~~~~~a~~ 351 (395)
.+++.|++ .+.+++++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~ 378 (394)
T cd03794 360 LELLDDPEERAEMGENGRR 378 (394)
T ss_pred HHHHhChHHHHHHHHHHHH
Confidence 99998774 2334444433
No 51
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.57 E-value=2.6e-05 Score=75.40 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=81.9
Q ss_pred CeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCHH---HHhcc
Q 048238 193 SVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQK---EILWH 262 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq~---~ll~~ 262 (395)
+.+++..|+..... .+.+.+.+..+.+ .+..++ .+|.. .....+.... ...++.+.+++|+. .+++.
T Consensus 188 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~-ivG~g--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ 264 (367)
T cd05844 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLV-IIGDG--PLLAALEALARALGLGGRVTFLGAQPHAEVRELMRR 264 (367)
T ss_pred CcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEE-EEeCc--hHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHh
Confidence 34555667765422 2333333333333 244444 44432 1112222211 24678888999864 46889
Q ss_pred cCccceeecC----------CchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHH
Q 048238 263 ESVQGFLSHC----------GWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKT 332 (395)
Q Consensus 263 ~~~~~~Ithg----------G~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~ 332 (395)
+++ +|..+ -.+++.||+++|+|+|+.+..+ ++..+.+. +.|..++. -+.+++.++
T Consensus 265 ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~~-~~g~~~~~--------~d~~~l~~~ 329 (367)
T cd05844 265 ARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVEDG-ETGLLVPE--------GDVAALAAA 329 (367)
T ss_pred CCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheecC-CeeEEECC--------CCHHHHHHH
Confidence 998 66422 2478999999999999877643 55666566 78887763 377999999
Q ss_pred HHHHhCCCh
Q 048238 333 VRELMGGEK 341 (395)
Q Consensus 333 i~~~l~~~~ 341 (395)
|.++++|++
T Consensus 330 i~~l~~~~~ 338 (367)
T cd05844 330 LGRLLADPD 338 (367)
T ss_pred HHHHHcCHH
Confidence 999998874
No 52
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.56 E-value=5e-05 Score=72.65 Aligned_cols=131 Identities=16% Similarity=0.183 Sum_probs=83.4
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHH---h-cCCCeEEecCCCHHH---Hhc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEER---V-KGRGLVVRDWVNQKE---ILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~pq~~---ll~ 261 (395)
++.+++..|+.... ..+.+..++..+.. .+..+++.-+.. ..+.+.+. . ...++.+.+++|+.+ +++
T Consensus 201 ~~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (374)
T cd03817 201 DEPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP---EREELEELARELGLADRVIFTGFVPREELPDYYK 277 (374)
T ss_pred CCeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc---hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHH
Confidence 45566777877542 33445555555544 345555554332 11222222 1 246889999998654 788
Q ss_pred ccCccceeecC----CchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFLSHC----GWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~Ithg----G~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
++++ +|..+ ...++.||+++|+|+|+.... ..+..+.+. +.|..++. . +. ++.+++.+++
T Consensus 278 ~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~~-~~g~~~~~------~--~~-~~~~~i~~l~ 341 (374)
T cd03817 278 AADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVADG-ENGFLFPP------G--DE-ALAEALLRLL 341 (374)
T ss_pred HcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----ChhhheecC-ceeEEeCC------C--CH-HHHHHHHHHH
Confidence 9998 66443 346899999999999997643 345555555 77888874 1 22 8999999999
Q ss_pred CCCh
Q 048238 338 GGEK 341 (395)
Q Consensus 338 ~~~~ 341 (395)
++++
T Consensus 342 ~~~~ 345 (374)
T cd03817 342 QDPE 345 (374)
T ss_pred hChH
Confidence 8874
No 53
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.55 E-value=2.3e-05 Score=79.25 Aligned_cols=199 Identities=13% Similarity=0.126 Sum_probs=107.1
Q ss_pred ccchhhHHHhhhhcCCcccccC-CCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHH
Q 048238 136 ELEPLFADHCNRVVKPKSWCVG-PLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIA 214 (395)
Q Consensus 136 ~le~~~~~~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~ 214 (395)
.+|.+++. + .+-++.+|| |+...-+. .....+..+-+.-. +++++|-+--||-...=...+-.++
T Consensus 370 PFE~~~y~---~-~gv~v~yVGHPL~d~i~~--------~~~~~~~r~~lgl~--~~~~iIaLLPGSR~~EI~rllPv~l 435 (608)
T PRK01021 370 PFEQNLFK---D-SPLRTVYLGHPLVETISS--------FSPNLSWKEQLHLP--SDKPIVAAFPGSRRGDILRNLTIQV 435 (608)
T ss_pred ccCHHHHH---h-cCCCeEEECCcHHhhccc--------CCCHHHHHHHcCCC--CCCCEEEEECCCCHHHHHHHHHHHH
Confidence 34555543 2 367899999 77654221 11233333433332 4678899989997543233344445
Q ss_pred HHHH--h--CCCcEEEEEcCCCCccchhHHHHhcCCC---eEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcE
Q 048238 215 TGLE--Q--SKVNFLWVIRKAESELGDGFEERVKGRG---LVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPI 287 (395)
Q Consensus 215 ~~l~--~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~ 287 (395)
++.+ . .+.+|++..... ...+.+++.....+ +.+..--...++++.+++ .+.-+| +.++|+...|+||
T Consensus 436 ~aa~~~~l~~~l~fvvp~a~~--~~~~~i~~~~~~~~~~~~~ii~~~~~~~~m~aaD~--aLaaSG-TaTLEaAL~g~Pm 510 (608)
T PRK01021 436 QAFLASSLASTHQLLVSSANP--KYDHLILEVLQQEGCLHSHIVPSQFRYELMRECDC--ALAKCG-TIVLETALNQTPT 510 (608)
T ss_pred HHHHHHHhccCeEEEEecCch--hhHHHHHHHHhhcCCCCeEEecCcchHHHHHhcCe--eeecCC-HHHHHHHHhCCCE
Confidence 5444 2 345666543321 11122233222222 122110013579999998 888888 5778999999999
Q ss_pred EeccCC-CchhHHHHHHhhh--hceEE-------EeeccCCCC--cCccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHH
Q 048238 288 LAWPIM-ADQPLNARMVTEE--IKVAL-------RVETCDGSV--RGFVKWQGLEKTVRELMGGEK-GEKARTKVKELSE 354 (395)
Q Consensus 288 i~~P~~-~DQ~~na~~v~~~--lg~g~-------~~~~~~~~~--~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~ 354 (395)
+++=.. .=...-++++.+. -=+|+ .+-+ .-- .++.+++.|.+++ ++|.|++ .+++++..+++++
T Consensus 511 VV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvP--EllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~lr~ 587 (608)
T PRK01021 511 IVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFP--EFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRDLYQ 587 (608)
T ss_pred EEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcch--hhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHH
Confidence 976332 1223345555441 01111 1111 001 1478999999997 7887774 3455566666655
Q ss_pred HH
Q 048238 355 IA 356 (395)
Q Consensus 355 ~~ 356 (395)
.+
T Consensus 588 ~L 589 (608)
T PRK01021 588 AM 589 (608)
T ss_pred Hh
Confidence 55
No 54
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.54 E-value=2e-05 Score=75.07 Aligned_cols=134 Identities=16% Similarity=0.136 Sum_probs=83.9
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHH---HhcccCcc
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKE---ILWHESVQ 266 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---ll~~~~~~ 266 (395)
+++.+++..|+.... ..+.+.+.+..+...+..+++. |......... .......++.+.+++++.+ +++.+++
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~-G~~~~~~~~~-~~~~~~~~v~~~g~~~~~~~~~~~~~ad~- 265 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIV-GNGLELEEES-YELEGDPRVEFLGAYPQEEIDDFYAEIDV- 265 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEE-cCchhhhHHH-HhhcCCCeEEEeCCCCHHHHHHHHHhCCE-
Confidence 345667777887542 2344444444444335565544 4321111000 0012346889999997544 7889998
Q ss_pred ceeec----CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 267 GFLSH----CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 267 ~~Ith----gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+|.. .|+ .++.||+++|+|+|+.+.. .....+.+. +.|+.+.. -+.+++.+++.+++++++
T Consensus 266 -~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~~-~~g~~~~~--------~d~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 266 -LVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRDG-VNGLLFPP--------GDAEDLAAALERLIDDPD 331 (359)
T ss_pred -EEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcCC-CcEEEECC--------CCHHHHHHHHHHHHhChH
Confidence 6632 333 4799999999999987643 345556454 67887764 358999999999998774
No 55
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.54 E-value=5.1e-05 Score=72.88 Aligned_cols=266 Identities=15% Similarity=0.134 Sum_probs=149.1
Q ss_pred HHHHHHHHhcCCCccE-EEECCchh-hHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCccCCCCCCCC
Q 048238 15 QPHFERALESLPHVSF-MVSDGFLW-WTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDELVTPPEFPWI 92 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~-vI~D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~lp~~ 92 (395)
...+..+|+.+ +||+ ||++.=++ ....-++..|||.+....=-+
T Consensus 112 ~~~v~rFl~~~-~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRLS--------------------------------- 157 (419)
T COG1519 112 PIAVRRFLRKW-RPKLLIIMETELWPNLINELKRRGIPLVLVNARLS--------------------------------- 157 (419)
T ss_pred hHHHHHHHHhc-CCCEEEEEeccccHHHHHHHHHcCCCEEEEeeeec---------------------------------
Confidence 34567788888 9997 56666444 566677899999997743100
Q ss_pred CcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcccCCCCCCCCCC
Q 048238 93 KITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAELSPKNEEPK 172 (395)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~ 172 (395)
-+.+..+ .....+.+..+ .+.++++.-|-. + .+.+...-.+++.-+|-+=-+-...
T Consensus 158 ---~rS~~~y-------~k~~~~~~~~~---~~i~li~aQse~--D---~~Rf~~LGa~~v~v~GNlKfd~~~~------ 213 (419)
T COG1519 158 ---DRSFARY-------AKLKFLARLLF---KNIDLILAQSEE--D---AQRFRSLGAKPVVVTGNLKFDIEPP------ 213 (419)
T ss_pred ---hhhhHHH-------HHHHHHHHHHH---HhcceeeecCHH--H---HHHHHhcCCcceEEecceeecCCCC------
Confidence 0000000 00111222222 345556655422 1 2222332234577777554332210
Q ss_pred CCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHHHhcCC----
Q 048238 173 NELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEERVKGR---- 246 (395)
Q Consensus 173 ~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~---- 246 (395)
..+......|-..- ..+++ +.|..+|.. -..+.+.+...++.+. +...||+=+.+ +.-+.+.+.....
T Consensus 214 -~~~~~~~~~~r~~l-~~~r~-v~iaaSTH~-GEeei~l~~~~~l~~~~~~~llIlVPRHp--ERf~~v~~l~~~~gl~~ 287 (419)
T COG1519 214 -PQLAAELAALRRQL-GGHRP-VWVAASTHE-GEEEIILDAHQALKKQFPNLLLILVPRHP--ERFKAVENLLKRKGLSV 287 (419)
T ss_pred -hhhHHHHHHHHHhc-CCCCc-eEEEecCCC-chHHHHHHHHHHHHhhCCCceEEEecCCh--hhHHHHHHHHHHcCCeE
Confidence 11233333333332 11133 455556643 3455566666666553 45566665543 2222222222223
Q ss_pred -------------CeEEecCCC-HHHHhcccCc----cceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhc
Q 048238 247 -------------GLVVRDWVN-QKEILWHESV----QGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIK 308 (395)
Q Consensus 247 -------------~~~~~~~~p-q~~ll~~~~~----~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg 308 (395)
++++.+-+- ...++.-+++ +-++-+||+| ..|.+++|+|+|.-|+..-|..-++++.+. |
T Consensus 288 ~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~-g 365 (419)
T COG1519 288 TRRSQGDPPFSDTDVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQA-G 365 (419)
T ss_pred EeecCCCCCCCCCcEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHhc-C
Confidence 333333332 3446666666 4466799987 679999999999999999999999999999 9
Q ss_pred eEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHH
Q 048238 309 VALRVETCDGSVRGFVKWQGLEKTVRELMGGEK-GEKARTKVKELSEIA 356 (395)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~ 356 (395)
+|+.++ +.+.+.+++..+++|++ .++|.+++.++-+..
T Consensus 366 a~~~v~----------~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 366 AGLQVE----------DADLLAKAVELLLADEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred CeEEEC----------CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 999997 48889999988888764 344545554444443
No 56
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.54 E-value=3.3e-06 Score=81.83 Aligned_cols=132 Identities=16% Similarity=0.173 Sum_probs=84.4
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHhCCC-cEEEEEcCCCCccchhHHHH---hc--CCCeEEecCCCH---HHHh
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQSKV-NFLWVIRKAESELGDGFEER---VK--GRGLVVRDWVNQ---KEIL 260 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~pq---~~ll 260 (395)
+++.+++.+|..... ..+.+..+++++..... .+.++.... ......+.+. .. ..++.+.+..+. ..++
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~-~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~ 275 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNH-PRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLL 275 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECC-CChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHH
Confidence 456788888876543 34567777777765432 233333221 1111223222 11 367777766553 3578
Q ss_pred cccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 261 WHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+.+++ +|+.+| +.+.|++++|+|+|.++-. |. +..+.+. |+++.+.. +.++|.++|.++++++
T Consensus 276 ~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~~-g~~~~~~~---------~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 276 KNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVES-GTNVLVGT---------DPEAILAAIEKLLSDE 338 (363)
T ss_pred HcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhhe-eeEEecCC---------CHHHHHHHHHHHhcCc
Confidence 88999 999999 7778999999999998643 22 3334455 77665542 5899999999999876
No 57
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.49 E-value=3e-05 Score=74.93 Aligned_cols=204 Identities=16% Similarity=0.145 Sum_probs=110.3
Q ss_pred ccchhhHHHhhhhcCCcccccC-CCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHH
Q 048238 136 ELEPLFADHCNRVVKPKSWCVG-PLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIA 214 (395)
Q Consensus 136 ~le~~~~~~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~ 214 (395)
.+|++++. ..+-++.||| |+...-.. ........+.+ -. .++++|.+--||-...=...+-.++
T Consensus 142 PFE~~~y~----~~g~~~~~VGHPl~d~~~~--------~~~~~~~~~~~-l~--~~~~iIaLLPGSR~~EI~rllP~~l 206 (373)
T PF02684_consen 142 PFEPEFYK----KHGVPVTYVGHPLLDEVKP--------EPDRAEAREKL-LD--PDKPIIALLPGSRKSEIKRLLPIFL 206 (373)
T ss_pred cccHHHHh----ccCCCeEEECCcchhhhcc--------CCCHHHHHHhc-CC--CCCcEEEEeCCCCHHHHHHHHHHHH
Confidence 34555543 2357899999 77754432 12233333333 22 4588999999997542222222333
Q ss_pred HH---HHh--CCCcEEEEEcCCCCccchh-HHHHh--cCCCeEEe-cCCCHHHHhcccCccceeecCCchhHHHHHhcCC
Q 048238 215 TG---LEQ--SKVNFLWVIRKAESELGDG-FEERV--KGRGLVVR-DWVNQKEILWHESVQGFLSHCGWNSALESICAGV 285 (395)
Q Consensus 215 ~~---l~~--~~~~~i~~~~~~~~~~~~~-~~~~~--~~~~~~~~-~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~Gv 285 (395)
++ +.+ .+.+|++...+. .... +.+.. ...++.+. ..-.-.++++.+++ .+.-+| +.++|+...|+
T Consensus 207 ~aa~~l~~~~p~l~fvvp~a~~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~ 280 (373)
T PF02684_consen 207 EAAKLLKKQRPDLQFVVPVAPE---VHEELIEEILAEYPPDVSIVIIEGESYDAMAAADA--ALAASG-TATLEAALLGV 280 (373)
T ss_pred HHHHHHHHhCCCeEEEEecCCH---HHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcc--hhhcCC-HHHHHHHHhCC
Confidence 33 333 456777665432 1112 21111 12222222 22245668888888 777776 57889999999
Q ss_pred cEEeccCC-CchhHHHHHHhhhhceEEE--eeccC--C-CCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHh
Q 048238 286 PILAWPIM-ADQPLNARMVTEEIKVALR--VETCD--G-SVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKA 359 (395)
Q Consensus 286 P~i~~P~~-~DQ~~na~~v~~~lg~g~~--~~~~~--~-~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~ 359 (395)
|||++=-. .=.++-|+++++.-=+|+. +-... + -..++.+++.|.+++.+++.|++ .++..+...+.+++.
T Consensus 281 P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~~---~~~~~~~~~~~~~~~ 357 (373)
T PF02684_consen 281 PMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENPE---KRKKQKELFREIRQL 357 (373)
T ss_pred CEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHh
Confidence 99976332 2233455555433112211 10000 0 01357899999999999999884 455555555555544
Q ss_pred hhhC
Q 048238 360 MEEE 363 (395)
Q Consensus 360 ~~~~ 363 (395)
.+.+
T Consensus 358 ~~~~ 361 (373)
T PF02684_consen 358 LGPG 361 (373)
T ss_pred hhhc
Confidence 4444
No 58
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.49 E-value=0.00018 Score=68.41 Aligned_cols=132 Identities=16% Similarity=0.152 Sum_probs=82.9
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCHH---HHhc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQK---EILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq~---~ll~ 261 (395)
++.+++..|+.... ..+.+...+..+... +..+++. |.. .....+.+.. ...++.+.+++++. .++.
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~-g~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIV-GDG--PLREALEALAAELGLEDRVTFLGAVPHEEVPAYYA 277 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEE-cCC--cchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHH
Confidence 45667777887542 234444444554443 3344333 332 1111222221 24688999999864 4788
Q ss_pred ccCccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
.+++ +|.. |..+++.||+++|+|+|+.+..+ ....+.+. +.|..++. -+.+++.++|.+++
T Consensus 278 ~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~~-~~g~~~~~--------~~~~~l~~~i~~~~ 342 (377)
T cd03798 278 AADV--FVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITDG-ENGLLVPP--------GDPEALAEAILRLL 342 (377)
T ss_pred hcCe--eecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcCC-cceeEECC--------CCHHHHHHHHHHHh
Confidence 8888 5532 44578999999999999876543 34455455 66777763 48899999999999
Q ss_pred CCCh
Q 048238 338 GGEK 341 (395)
Q Consensus 338 ~~~~ 341 (395)
++++
T Consensus 343 ~~~~ 346 (377)
T cd03798 343 ADPW 346 (377)
T ss_pred cCcH
Confidence 8873
No 59
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=98.45 E-value=2.1e-05 Score=71.20 Aligned_cols=146 Identities=17% Similarity=0.212 Sum_probs=106.7
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCC-HHHHhcccCcccee
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVN-QKEILWHESVQGFL 269 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p-q~~ll~~~~~~~~I 269 (395)
..-|+|++|.... ....-+++..|.+.++.+-+++|.....++ ....+. ..+|+...-... ...++..+++ .|
T Consensus 158 ~r~ilI~lGGsDp--k~lt~kvl~~L~~~~~nl~iV~gs~~p~l~-~l~k~~~~~~~i~~~~~~~dma~LMke~d~--aI 232 (318)
T COG3980 158 KRDILITLGGSDP--KNLTLKVLAELEQKNVNLHIVVGSSNPTLK-NLRKRAEKYPNINLYIDTNDMAELMKEADL--AI 232 (318)
T ss_pred hheEEEEccCCCh--hhhHHHHHHHhhccCeeEEEEecCCCcchh-HHHHHHhhCCCeeeEecchhHHHHHHhcch--he
Confidence 4459999998753 235566777788888888778875433332 333322 345666555554 5569999999 99
Q ss_pred ecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHH
Q 048238 270 SHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKV 349 (395)
Q Consensus 270 thgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a 349 (395)
+.+| .|+.|++.-|+|.+++|+...|.--|...+.. |+-..+.. .++.+.+...+.+++.|. ..|++.
T Consensus 233 ~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~l-g~~~~l~~-------~l~~~~~~~~~~~i~~d~---~~rk~l 300 (318)
T COG3980 233 SAAG-STLYEALLLGVPSLVLPLAENQIATAKEFEAL-GIIKQLGY-------HLKDLAKDYEILQIQKDY---ARRKNL 300 (318)
T ss_pred eccc-hHHHHHHHhcCCceEEeeeccHHHHHHHHHhc-CchhhccC-------CCchHHHHHHHHHhhhCH---HHhhhh
Confidence 9988 48999999999999999999999999999666 88887764 378888888898999888 555554
Q ss_pred HHHHH
Q 048238 350 KELSE 354 (395)
Q Consensus 350 ~~l~~ 354 (395)
-.-.+
T Consensus 301 ~~~~~ 305 (318)
T COG3980 301 SFGSK 305 (318)
T ss_pred hhccc
Confidence 44333
No 60
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.42 E-value=9.1e-05 Score=70.18 Aligned_cols=136 Identities=16% Similarity=0.138 Sum_probs=85.0
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchh--HHHHhcCCCeEEecCCC-HHHHhcccC
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDG--FEERVKGRGLVVRDWVN-QKEILWHES 264 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p-q~~ll~~~~ 264 (395)
.++.+++..|+.... ..+.+.+.+..+.+ .+..+++.-+......... ........++.+.++.. ...+++.++
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 346677888887542 33555555555543 3455554433321111111 11112245777777754 456999999
Q ss_pred ccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 265 VQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 265 ~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+ +|..+. .++++||+++|+|+|+.+..+ ....+.+. +.|..++. -+.+++.++|.+++.++
T Consensus 266 i--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~~-~~g~~~~~--------~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 V--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVIDG-VNGFLVPP--------GDAEALADAIERLIEDP 330 (359)
T ss_pred E--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhcC-cceEEECC--------CCHHHHHHHHHHHHhCH
Confidence 8 775543 478999999999999976543 34445445 77887763 37899999999999887
Q ss_pred h
Q 048238 341 K 341 (395)
Q Consensus 341 ~ 341 (395)
+
T Consensus 331 ~ 331 (359)
T cd03808 331 E 331 (359)
T ss_pred H
Confidence 4
No 61
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.37 E-value=0.00038 Score=67.88 Aligned_cols=135 Identities=16% Similarity=0.206 Sum_probs=85.1
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccch---h---HHHHh-cCCCeEEecCCCHHH---
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGD---G---FEERV-KGRGLVVRDWVNQKE--- 258 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~---~---~~~~~-~~~~~~~~~~~pq~~--- 258 (395)
+..+++..|+.... ..+.+.+.+..+.. .+..++++.+........ . +.+.. ...++.+.+|+|+.+
T Consensus 219 ~~~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 298 (398)
T cd03800 219 DKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPA 298 (398)
T ss_pred CCcEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHH
Confidence 44566777887542 23444444444432 345666665543211111 1 11111 236799999999755
Q ss_pred HhcccCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 259 ILWHESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 259 ll~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
+++.+++ ++..+ | ..+++||+++|+|+|+....+ ....+.+. +.|+.++. .+.+++.++|.
T Consensus 299 ~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~~-~~g~~~~~--------~~~~~l~~~i~ 363 (398)
T cd03800 299 LYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVDG-VTGLLVDP--------RDPEALAAALR 363 (398)
T ss_pred HHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccCC-CCeEEeCC--------CCHHHHHHHHH
Confidence 6889998 77442 2 368999999999999876543 44556555 78888864 36899999999
Q ss_pred HHhCCCh
Q 048238 335 ELMGGEK 341 (395)
Q Consensus 335 ~~l~~~~ 341 (395)
+++++++
T Consensus 364 ~l~~~~~ 370 (398)
T cd03800 364 RLLTDPA 370 (398)
T ss_pred HHHhCHH
Confidence 9998763
No 62
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.36 E-value=0.00015 Score=68.38 Aligned_cols=144 Identities=15% Similarity=0.186 Sum_probs=85.9
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHH---Hh-cCCCeEEecCCC-HHHHhccc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEE---RV-KGRGLVVRDWVN-QKEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~p-q~~ll~~~ 263 (395)
+..+++..|+.... ..+.+.+.+..+.+ .+..+++.-... ....+.+ .. ...++.+.++.. ...+++.+
T Consensus 177 ~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 253 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP---EREALEALIKELGLEDRVILLGFTKNIEEYYAKA 253 (348)
T ss_pred CCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC---CHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhC
Confidence 34556667776542 23445555555543 344554443321 1112221 11 235677777743 45699999
Q ss_pred CccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhc-eEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 264 SVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIK-VALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 264 ~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg-~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
++ +|.... .++++||+++|+|+|+.+..+.+. .+.+. + .|..++. .+.+++.++|.++++
T Consensus 254 d~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~-~~~g~~~~~--------~~~~~~~~~i~~ll~ 318 (348)
T cd03820 254 SI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIED-GVNGLLVPN--------GDVEALAEALLRLME 318 (348)
T ss_pred CE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhcc-CcceEEeCC--------CCHHHHHHHHHHHHc
Confidence 98 776542 468999999999999876544332 23344 4 7877763 368999999999999
Q ss_pred CCh-hHHHHHHHHHHH
Q 048238 339 GEK-GEKARTKVKELS 353 (395)
Q Consensus 339 ~~~-~~~~~~~a~~l~ 353 (395)
|++ .+.+++++++..
T Consensus 319 ~~~~~~~~~~~~~~~~ 334 (348)
T cd03820 319 DEELRKRMGANARESA 334 (348)
T ss_pred CHHHHHHHHHHHHHHH
Confidence 884 234444444333
No 63
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.35 E-value=0.00027 Score=68.33 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=86.2
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh-CCCcEEEEEcCCCCccchhHHHH---hc-CCCeEEecCCCH-HHHhcccC
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ-SKVNFLWVIRKAESELGDGFEER---VK-GRGLVVRDWVNQ-KEILWHES 264 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~pq-~~ll~~~~ 264 (395)
+..+++.+|..... ..+.+.+.+..+.+ .+.++++.-... ..+.+.+. .. ..++.+.++.++ ..+++.++
T Consensus 196 ~~~~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d 272 (371)
T cd04962 196 GEKVLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP---ERSPAERLARELGLQDDVLFLGKQDHVEELLSIAD 272 (371)
T ss_pred CCeEEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc---CHHHHHHHHHHcCCCceEEEecCcccHHHHHHhcC
Confidence 44566777877542 22333333333333 355665553332 11222221 11 356888888764 45899999
Q ss_pred ccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 265 VQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 265 ~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+ +|.- |...++.||+++|+|+|+.... ..+..+.+. ..|..++. -+.+++.+++.++++++
T Consensus 273 ~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~~-~~G~~~~~--------~~~~~l~~~i~~l~~~~ 337 (371)
T cd04962 273 L--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKHG-ETGFLVDV--------GDVEAMAEYALSLLEDD 337 (371)
T ss_pred E--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcCC-CceEEcCC--------CCHHHHHHHHHHHHhCH
Confidence 8 6633 2346999999999999996543 345555454 57776653 37899999999999876
Q ss_pred h-hHHHHHHHHHH
Q 048238 341 K-GEKARTKVKEL 352 (395)
Q Consensus 341 ~-~~~~~~~a~~l 352 (395)
+ .+.+++++++.
T Consensus 338 ~~~~~~~~~~~~~ 350 (371)
T cd04962 338 ELWQEFSRAARNR 350 (371)
T ss_pred HHHHHHHHHHHHH
Confidence 4 23444554443
No 64
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.35 E-value=3.2e-06 Score=69.01 Aligned_cols=121 Identities=20% Similarity=0.235 Sum_probs=84.6
Q ss_pred CCeeEEEecccccCC---HHHHHHHHHHHHhCCC-cEEEEEcCCCCccchhHHHHhcCCCeE--EecCCCH-HHHhcccC
Q 048238 192 SSVMYVAFGSQAEIS---AQQLKEIATGLEQSKV-NFLWVIRKAESELGDGFEERVKGRGLV--VRDWVNQ-KEILWHES 264 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~---~~~~~~l~~~l~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~pq-~~ll~~~~ 264 (395)
...+||+-||....+ --.-.+..+.|.+.|+ +.++..|....-.++.........++. ..+|.|- .+..+.++
T Consensus 3 ~~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Ad 82 (170)
T KOG3349|consen 3 LMTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSAD 82 (170)
T ss_pred ceEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhcc
Confidence 457999999987311 1112345566777775 678888886333333333221234443 4567775 66888899
Q ss_pred ccceeecCCchhHHHHHhcCCcEEeccC----CCchhHHHHHHhhhhceEEEeec
Q 048238 265 VQGFLSHCGWNSALESICAGVPILAWPI----MADQPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 265 ~~~~IthgG~~s~~Ea~~~GvP~i~~P~----~~DQ~~na~~v~~~lg~g~~~~~ 315 (395)
+ +|+|+|+||++|.+..|+|.|+++- -.+|..-|..+++. |.=+....
T Consensus 83 l--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e-gyL~~C~p 134 (170)
T KOG3349|consen 83 L--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE-GYLYYCTP 134 (170)
T ss_pred E--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc-CcEEEeec
Confidence 9 9999999999999999999999985 36788899999888 77666654
No 65
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.34 E-value=0.00033 Score=67.03 Aligned_cols=144 Identities=17% Similarity=0.200 Sum_probs=83.7
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchh-------HHHHhcCCCeEEec-CCCHH---
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDG-------FEERVKGRGLVVRD-WVNQK--- 257 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~pq~--- 257 (395)
.+.+++.+|+.... ..+.+...+..+.. .+..+++. |......... ..+.....++.+.+ |+|+.
T Consensus 184 ~~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~-G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 184 GRPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVA-GETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEe-ccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 45566777877543 23444444444433 24444444 4321111111 11212245777765 48753
Q ss_pred HHhcccCccceeec------CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHH
Q 048238 258 EILWHESVQGFLSH------CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEK 331 (395)
Q Consensus 258 ~ll~~~~~~~~Ith------gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~ 331 (395)
.+++.+++ +|.- +-.++++||+++|+|+|+.+..+ ...+.+. +.|+.+.. -+.+++.+
T Consensus 263 ~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~~-~~g~~~~~--------~d~~~~~~ 326 (366)
T cd03822 263 ELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLDG-GTGLLVPP--------GDPAALAE 326 (366)
T ss_pred HHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeeeC-CCcEEEcC--------CCHHHHHH
Confidence 58888888 6632 22458899999999999987654 2334455 77877764 36899999
Q ss_pred HHHHHhCCCh-hHHHHHHHHHH
Q 048238 332 TVRELMGGEK-GEKARTKVKEL 352 (395)
Q Consensus 332 ~i~~~l~~~~-~~~~~~~a~~l 352 (395)
++.+++++++ .+++++++++.
T Consensus 327 ~l~~l~~~~~~~~~~~~~~~~~ 348 (366)
T cd03822 327 AIRRLLADPELAQALRARAREY 348 (366)
T ss_pred HHHHHHcChHHHHHHHHHHHHH
Confidence 9999998863 23344444443
No 66
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.30 E-value=0.00088 Score=65.82 Aligned_cols=84 Identities=18% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCeEEecCCCHHH---HhcccCccceeec-CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCC
Q 048238 245 GRGLVVRDWVNQKE---ILWHESVQGFLSH-CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGS 319 (395)
Q Consensus 245 ~~~~~~~~~~pq~~---ll~~~~~~~~Ith-gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~ 319 (395)
..++.+.+++|+.+ +++.+++-++.+. .|. .+++||+++|+|+|+... ......+.+. ..|+.++.
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~~-~~G~lv~~---- 350 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITDG-ENGLLVDF---- 350 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhcccC-CceEEcCC----
Confidence 46799999998654 7788888322232 222 479999999999998643 3344555444 56877764
Q ss_pred CcCccCHHHHHHHHHHHhCCCh
Q 048238 320 VRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
.+.++++++|.++++|++
T Consensus 351 ----~d~~~la~~i~~ll~~~~ 368 (396)
T cd03818 351 ----FDPDALAAAVIELLDDPA 368 (396)
T ss_pred ----CCHHHHHHHHHHHHhCHH
Confidence 379999999999998874
No 67
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.27 E-value=0.00035 Score=66.83 Aligned_cols=135 Identities=13% Similarity=0.142 Sum_probs=81.9
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCCHH---HHhcccC
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVNQK---EILWHES 264 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~---~ll~~~~ 264 (395)
++..++.+|+.... ..+.+.+.+..+... +..+++.-+.........+.++. ...++.+.+++|+. .++++++
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCC
Confidence 45666777877432 234444444444443 34554443322111111111111 24689999999754 4788888
Q ss_pred ccceeec----------CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 265 VQGFLSH----------CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 265 ~~~~Ith----------gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
+ +|.. |.-++++||+++|+|+|+.+..+ ....+.+. ..|..+.. -+.+++.++|.
T Consensus 258 i--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~~-~~g~~~~~--------~~~~~l~~~i~ 322 (355)
T cd03799 258 L--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVEDG-ETGLLVPP--------GDPEALADAIE 322 (355)
T ss_pred E--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhCC-CceEEeCC--------CCHHHHHHHHH
Confidence 8 6652 23468999999999999876532 22334233 47877763 38899999999
Q ss_pred HHhCCCh
Q 048238 335 ELMGGEK 341 (395)
Q Consensus 335 ~~l~~~~ 341 (395)
+++++++
T Consensus 323 ~~~~~~~ 329 (355)
T cd03799 323 RLLDDPE 329 (355)
T ss_pred HHHhCHH
Confidence 9998874
No 68
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.25 E-value=0.00018 Score=68.84 Aligned_cols=143 Identities=15% Similarity=0.115 Sum_probs=88.3
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHhCC-CcEEEEEcCCCCccchhHHHH----hcCCCeEEecCCCHH---HHhccc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQSK-VNFLWVIRKAESELGDGFEER----VKGRGLVVRDWVNQK---EILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~pq~---~ll~~~ 263 (395)
+..+++..|+.... .....+++++.... ..+++.-.+. ....+.+. ....|+.+.+|+|+. .+++.+
T Consensus 190 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~l~i~G~g~---~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a 264 (357)
T cd03795 190 GRPFFLFVGRLVYY--KGLDVLLEAAAALPDAPLVIVGEGP---LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC 264 (357)
T ss_pred CCcEEEEecccccc--cCHHHHHHHHHhccCcEEEEEeCCh---hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC
Confidence 44566777877532 33444556665544 5555544321 22222221 235689999999964 488888
Q ss_pred Cccceeec---CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 264 SVQGFLSH---CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 264 ~~~~~Ith---gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
++.++-++ -|. .++.||+++|+|+|+....+....... +. +.|..++. -+.+++.++|.++++|
T Consensus 265 d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~~-~~g~~~~~--------~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 265 DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---HG-VTGLVVPP--------GDPAALAEAIRRLLED 332 (357)
T ss_pred CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---CC-CceEEeCC--------CCHHHHHHHHHHHHHC
Confidence 88333332 333 479999999999999765544433222 24 67877763 3799999999999988
Q ss_pred Ch-hHHHHHHHHH
Q 048238 340 EK-GEKARTKVKE 351 (395)
Q Consensus 340 ~~-~~~~~~~a~~ 351 (395)
++ .+++++++++
T Consensus 333 ~~~~~~~~~~~~~ 345 (357)
T cd03795 333 PELRERLGEAARE 345 (357)
T ss_pred HHHHHHHHHHHHH
Confidence 74 3344444444
No 69
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.24 E-value=7.9e-05 Score=71.81 Aligned_cols=127 Identities=12% Similarity=0.175 Sum_probs=83.5
Q ss_pred eEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHH---HHhcccCccceeec
Q 048238 195 MYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQK---EILWHESVQGFLSH 271 (395)
Q Consensus 195 v~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~---~ll~~~~~~~~Ith 271 (395)
.++..|.+.. ......+++++...+.+++++-++. ..+.+.+ ....|+.+.+++|+. .+++.+++-++-+.
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~---~~~~l~~-~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~ 270 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP---ELDRLRA-KAGPNVTFLGRVSDEELRDLYARARAFLFPAE 270 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh---hHHHHHh-hcCCCEEEecCCCHHHHHHHHHhCCEEEECCc
Confidence 3455677653 2345556677777667766554432 1122222 345789999999974 47889998332234
Q ss_pred CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 272 CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 272 gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
-|+ .++.||+++|+|+|+....+ ....+.+. +.|+.++. -+.+.++++|.++++|+
T Consensus 271 e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~~-~~G~~~~~--------~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 271 EDFGIVPVEAMASGTPVIAYGKGG----ALETVIDG-VTGILFEE--------QTVESLAAAVERFEKNE 327 (351)
T ss_pred CCCCchHHHHHHcCCCEEEeCCCC----CcceeeCC-CCEEEeCC--------CCHHHHHHHHHHHHhCc
Confidence 344 46789999999999986533 33345454 67888764 37888999999999887
No 70
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.20 E-value=0.00047 Score=65.02 Aligned_cols=132 Identities=14% Similarity=0.121 Sum_probs=79.0
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHH---HHh-cCCCeEEecCCCH-HHHhcc
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFE---ERV-KGRGLVVRDWVNQ-KEILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~pq-~~ll~~ 262 (395)
.++.+++..|+.... ..+.+.+.+..+... +..+++. |.. .....+. +.. ...++.+.++.+. .++++.
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~-G~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVIL-GDG--PLREELEALAKELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEE-cCC--ccHHHHHHHHHhcCCCccEEEecccCCHHHHHHh
Confidence 355677778887532 224444444444443 4555554 432 1111221 111 2457888888764 468999
Q ss_pred cCccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHH---HHHHHH
Q 048238 263 ESVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGL---EKTVRE 335 (395)
Q Consensus 263 ~~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l---~~~i~~ 335 (395)
+++ +|.- |..+++.||+++|+|+|+.... .....+.+. +.|+.++. -+.+.+ .+++..
T Consensus 264 ~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~--------~~~~~~~~~~~~i~~ 328 (353)
T cd03811 264 ADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILEDG-ENGLLVPV--------GDEAALAAAALALLD 328 (353)
T ss_pred CCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcCC-CceEEECC--------CCHHHHHHHHHHHHh
Confidence 998 6643 2346899999999999986543 445566555 78888764 366666 555555
Q ss_pred HhCCC
Q 048238 336 LMGGE 340 (395)
Q Consensus 336 ~l~~~ 340 (395)
++.++
T Consensus 329 ~~~~~ 333 (353)
T cd03811 329 LLLDP 333 (353)
T ss_pred ccCCh
Confidence 55555
No 71
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.20 E-value=0.0012 Score=65.47 Aligned_cols=142 Identities=18% Similarity=0.250 Sum_probs=82.4
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--------CCCcEEEEEcCCCCccchhHHHHh---cCCCeEEe-cCCCHH-
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--------SKVNFLWVIRKAESELGDGFEERV---KGRGLVVR-DWVNQK- 257 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--------~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~pq~- 257 (395)
+..++++.|..... ..+.+.+.+..+.+ .+..++ .+|.. ...+.+.+.. .-.++++. +|+|..
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~-ivG~G--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~ 307 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCI-ITGKG--PLKEKYLERIKELKLKKVTIRTPWLSAED 307 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEE-EEecC--ccHHHHHHHHHHcCCCcEEEEcCcCCHHH
Confidence 45566666776532 23444444444432 123443 34432 1222333322 22455544 588744
Q ss_pred --HHhcccCccceee-c---CC---chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHH
Q 048238 258 --EILWHESVQGFLS-H---CG---WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQG 328 (395)
Q Consensus 258 --~ll~~~~~~~~It-h---gG---~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~ 328 (395)
++|+.+++ +|. + -| -+.++||+++|+|+|+.... .....+.+. +.|+.+. +.++
T Consensus 308 ~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~~-~~G~lv~----------d~~~ 370 (415)
T cd03816 308 YPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKHG-ENGLVFG----------DSEE 370 (415)
T ss_pred HHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcCC-CCEEEEC----------CHHH
Confidence 47889999 663 1 12 34699999999999996532 344556555 6888763 6899
Q ss_pred HHHHHHHHhCC---Ch-hHHHHHHHHHHH
Q 048238 329 LEKTVRELMGG---EK-GEKARTKVKELS 353 (395)
Q Consensus 329 l~~~i~~~l~~---~~-~~~~~~~a~~l~ 353 (395)
++++|.++++| ++ .+++.+++++..
T Consensus 371 la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 371 LAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 99999999988 43 344444444433
No 72
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.20 E-value=0.00066 Score=65.18 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=59.9
Q ss_pred CCCeEEecCCC-HH---HHhcccCccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeecc
Q 048238 245 GRGLVVRDWVN-QK---EILWHESVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETC 316 (395)
Q Consensus 245 ~~~~~~~~~~p-q~---~ll~~~~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~ 316 (395)
..++.+.+|++ +. .+++.+++ +|.... .+++.||+++|+|+|+.... .....+.+. +.|+.++.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~~-~~g~~~~~- 314 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDHG-VTGYLAKP- 314 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeCC-CceEEeCC-
Confidence 45788889998 43 47889998 877543 47999999999999987543 222334333 57776653
Q ss_pred CCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 317 DGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 317 ~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
.+.+++.+++.+++++++
T Consensus 315 -------~~~~~~~~~l~~l~~~~~ 332 (365)
T cd03825 315 -------GDPEDLAEGIEWLLADPD 332 (365)
T ss_pred -------CCHHHHHHHHHHHHhCHH
Confidence 478999999999998774
No 73
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.15 E-value=7.2e-05 Score=72.12 Aligned_cols=255 Identities=12% Similarity=0.066 Sum_probs=130.2
Q ss_pred HHHHHHhcHHHHHHHHhcCCCccEEEE--CCchh-hHHHHHHHcCCCcEEEecchHHHHHHHHhhhhccCCCCCCCCCCc
Q 048238 7 FTRATKLMQPHFERALESLPHVSFMVS--DGFLW-WTLDSANKFGFPRFVFYGMNNYVMCVSSSVGANRSLSGVQSDDEL 83 (395)
Q Consensus 7 ~~~a~~~~~~~l~~~l~~~~kpD~vI~--D~~~~-~~~~~A~~lgIP~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 83 (395)
.-..+..+...+.+.+++. +||+||+ |.+.. ++..+|..++||++-+-..
T Consensus 48 ~~~~~~~~~~~~~~~~~~~-~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaG-------------------------- 100 (346)
T PF02350_consen 48 MAKSTGLAIIELADVLERE-KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAG-------------------------- 100 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHH-T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES----------------------------
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCC--------------------------
Confidence 3445567788899999998 9999776 44444 6677889999997755331
Q ss_pred cCCCCCCCCCcCcccCCCCCCCCCCCCchHHHHHHHHhhccCcceeeeccccccchhhHHHhhh-hc-CCcccccCCCcc
Q 048238 84 VTPPEFPWIKITKKDFDPPITDPEPKGPQFELFIDQIVSTSNSYGMIVNSFYELEPLFADHCNR-VV-KPKSWCVGPLCL 161 (395)
Q Consensus 84 ~~~p~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlins~~~le~~~~~~~~~-~~-~~~~~~vGpl~~ 161 (395)
+ +..+.. .....+..+..... -+++.++++-. +.+.+.+ -. +.+++.||-...
T Consensus 101 -----l-----Rs~d~~--------~g~~de~~R~~i~~--la~lhf~~t~~-----~~~~L~~~G~~~~rI~~vG~~~~ 155 (346)
T PF02350_consen 101 -----L-----RSGDRT--------EGMPDEINRHAIDK--LAHLHFAPTEE-----ARERLLQEGEPPERIFVVGNPGI 155 (346)
T ss_dssp -------------S-TT--------SSTTHHHHHHHHHH--H-SEEEESSHH-----HHHHHHHTT--GGGEEE---HHH
T ss_pred -----C-----CccccC--------CCCchhhhhhhhhh--hhhhhccCCHH-----HHHHHHhcCCCCCeEEEEChHHH
Confidence 0 000000 01122333333322 23455555522 2222221 11 367888885543
Q ss_pred cCCCCCCCCCCCCCCchHH--HHHhhhccCCCCCeeEEEecccccCC-H---HHHHHHHHHHHhC-CCcEEEEEcCCCCc
Q 048238 162 AELSPKNEEPKNELSKPAW--IRWLDRKLDEGSSVMYVAFGSQAEIS-A---QQLKEIATGLEQS-KVNFLWVIRKAESE 234 (395)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~l--~~~l~~~~~~~~~vv~vs~Gs~~~~~-~---~~~~~l~~~l~~~-~~~~i~~~~~~~~~ 234 (395)
+.-.. .. ....++. ..++.. ..++.+++++=...... + ..+.++++++.+. +.++||...+.. .
T Consensus 156 D~l~~--~~---~~~~~~~~~~~i~~~---~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p-~ 226 (346)
T PF02350_consen 156 DALLQ--NK---EEIEEKYKNSGILQD---APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP-R 226 (346)
T ss_dssp HHHHH--HH---HTTCC-HHHHHHHHC---TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H-H
T ss_pred HHHHH--hH---HHHhhhhhhHHHHhc---cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc-h
Confidence 32110 00 0011111 122222 35789999885554444 3 4555666666665 788999987531 1
Q ss_pred cchhHHHHhc-CCCeEEecCCCH---HHHhcccCccceeecCCchhHH-HHHhcCCcEEeccCCCchhHHHHHHhhhhce
Q 048238 235 LGDGFEERVK-GRGLVVRDWVNQ---KEILWHESVQGFLSHCGWNSAL-ESICAGVPILAWPIMADQPLNARMVTEEIKV 309 (395)
Q Consensus 235 ~~~~~~~~~~-~~~~~~~~~~pq---~~ll~~~~~~~~IthgG~~s~~-Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~ 309 (395)
....+.+... -+|+.+..-++. ..+|+++++ +||-+| ++. ||.+.|+|+|.+=..++.+. -+ .. |.
T Consensus 227 ~~~~i~~~l~~~~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe---~r-~~-~~ 297 (346)
T PF02350_consen 227 GSDIIIEKLKKYDNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQE---GR-ER-GS 297 (346)
T ss_dssp HHHHHHHHHTT-TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HH---HH-HT-TS
T ss_pred HHHHHHHHhcccCCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHH---HH-hh-cc
Confidence 1112222222 148888777664 458889999 999999 666 99999999999922222222 12 44 66
Q ss_pred EEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 310 ALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 310 g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
.+.+. .+.++|.+++.+++.+.
T Consensus 298 nvlv~---------~~~~~I~~ai~~~l~~~ 319 (346)
T PF02350_consen 298 NVLVG---------TDPEAIIQAIEKALSDK 319 (346)
T ss_dssp EEEET---------SSHHHHHHHHHHHHH-H
T ss_pred eEEeC---------CCHHHHHHHHHHHHhCh
Confidence 66543 48999999999999763
No 74
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.14 E-value=0.0032 Score=61.35 Aligned_cols=138 Identities=14% Similarity=0.179 Sum_probs=79.3
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHhC--CCcEEEEEcCCC-CccchhHHHHhc-----CCCeEE-ecCCCH---HHHh
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQS--KVNFLWVIRKAE-SELGDGFEERVK-----GRGLVV-RDWVNQ---KEIL 260 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~-~~~~~~~~~~~~-----~~~~~~-~~~~pq---~~ll 260 (395)
..+++..|..... +.+..+++++... +..+++..+... ..+...+.+... ..++.. .++++. ..++
T Consensus 201 ~~~i~~~Grl~~~--Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 278 (388)
T TIGR02149 201 RPYILFVGRITRQ--KGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELL 278 (388)
T ss_pred ceEEEEEcccccc--cCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHH
Confidence 4455666776532 3344455555442 556666554431 112222222211 123553 456774 3478
Q ss_pred cccCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 261 WHESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 261 ~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
+++|+ +|.-. | ..+++||+++|+|+|+.... .....+.+. ..|..++..+ .+..-..+++.++|.++
T Consensus 279 ~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~~-~~G~~~~~~~--~~~~~~~~~l~~~i~~l 349 (388)
T TIGR02149 279 SNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVDG-ETGFLVPPDN--SDADGFQAELAKAINIL 349 (388)
T ss_pred HhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhCC-CceEEcCCCC--CcccchHHHHHHHHHHH
Confidence 99998 77532 2 35779999999999997543 345555555 6788887510 00111238999999999
Q ss_pred hCCCh
Q 048238 337 MGGEK 341 (395)
Q Consensus 337 l~~~~ 341 (395)
++|++
T Consensus 350 ~~~~~ 354 (388)
T TIGR02149 350 LADPE 354 (388)
T ss_pred HhCHH
Confidence 98874
No 75
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.14 E-value=0.0018 Score=62.05 Aligned_cols=148 Identities=14% Similarity=0.083 Sum_probs=86.3
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCC-ccchhHHH---Hh-cCCCeEEecCCC-HHHHhc
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAES-ELGDGFEE---RV-KGRGLVVRDWVN-QKEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~-~~~~~~~~---~~-~~~~~~~~~~~p-q~~ll~ 261 (395)
++..+++..|..... ..+.+.+.+..+.. .+..++++-..... .....+.+ +. ...++.+.++.+ ...+++
T Consensus 183 ~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~ 262 (355)
T cd03819 183 KGKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYA 262 (355)
T ss_pred CCceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHH
Confidence 345566777776543 34556666666655 34454444332211 11111111 11 235788888865 355899
Q ss_pred ccCccceeecC----C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 262 HESVQGFLSHC----G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 262 ~~~~~~~Ithg----G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
.+++ +|.-. | .++++||+++|+|+|+.-.. .....+.+. +.|..++. -+.+++.++|..+
T Consensus 263 ~ad~--~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i~~~-~~g~~~~~--------~~~~~l~~~i~~~ 327 (355)
T cd03819 263 LADI--VVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETVRPG-ETGLLVPP--------GDAEALAQALDQI 327 (355)
T ss_pred hCCE--EEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHHhCC-CceEEeCC--------CCHHHHHHHHHHH
Confidence 9998 55432 3 36999999999999987543 234445344 57887763 3889999999765
Q ss_pred hC-CCh-hHHHHHHHHHHH
Q 048238 337 MG-GEK-GEKARTKVKELS 353 (395)
Q Consensus 337 l~-~~~-~~~~~~~a~~l~ 353 (395)
+. +++ .+++++++++..
T Consensus 328 ~~~~~~~~~~~~~~a~~~~ 346 (355)
T cd03819 328 LSLLPEGRAKMFAKARMCV 346 (355)
T ss_pred HhhCHHHHHHHHHHHHHHH
Confidence 54 443 334444444443
No 76
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.13 E-value=0.0045 Score=61.16 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=84.5
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHh----CCCcEEEEEcCCCCccchhHHHH---hcCCCeEEecCCCHH---HHhc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQ----SKVNFLWVIRKAESELGDGFEER---VKGRGLVVRDWVNQK---EILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~----~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~pq~---~ll~ 261 (395)
++.+++..|++... ..+..+++++.. .+.+++ ++|.. ...+.+.+. ..-.|+.+.+|+|+. ++++
T Consensus 228 ~~~~i~~~G~l~~~--kg~~~li~a~~~l~~~~~~~l~-ivG~g--~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~ 302 (412)
T PRK10307 228 GKKIVLYSGNIGEK--QGLELVIDAARRLRDRPDLIFV-ICGQG--GGKARLEKMAQCRGLPNVHFLPLQPYDRLPALLK 302 (412)
T ss_pred CCEEEEEcCccccc--cCHHHHHHHHHHhccCCCeEEE-EECCC--hhHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHH
Confidence 34566667887532 233334444432 234554 34432 122223322 223479999999864 4788
Q ss_pred ccCccceeecCCc------hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 262 HESVQGFLSHCGW------NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 262 ~~~~~~~IthgG~------~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
.+|+.++.+..+. +.+.|++++|+|+|+....+.. ....+ + +.|+.++. -+.++++++|.+
T Consensus 303 ~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~--~~~~i-~--~~G~~~~~--------~d~~~la~~i~~ 369 (412)
T PRK10307 303 MADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTE--LGQLV-E--GIGVCVEP--------ESVEALVAAIAA 369 (412)
T ss_pred hcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCch--HHHHH-h--CCcEEeCC--------CCHHHHHHHHHH
Confidence 9998555555432 2368999999999998654321 11222 2 56777763 378999999999
Q ss_pred HhCCCh-hHHHHHHHHHH
Q 048238 336 LMGGEK-GEKARTKVKEL 352 (395)
Q Consensus 336 ~l~~~~-~~~~~~~a~~l 352 (395)
+++|++ .+.+++++++.
T Consensus 370 l~~~~~~~~~~~~~a~~~ 387 (412)
T PRK10307 370 LARQALLRPKLGTVAREY 387 (412)
T ss_pred HHhCHHHHHHHHHHHHHH
Confidence 998774 34455555543
No 77
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.12 E-value=0.00037 Score=68.56 Aligned_cols=136 Identities=15% Similarity=0.171 Sum_probs=81.7
Q ss_pred eeEEEecccccCC-HHHHH----HHHHHHHh--CCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCH-HHHhcccCc
Q 048238 194 VMYVAFGSQAEIS-AQQLK----EIATGLEQ--SKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQ-KEILWHESV 265 (395)
Q Consensus 194 vv~vs~Gs~~~~~-~~~~~----~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq-~~ll~~~~~ 265 (395)
.+++..|++.... .+.+. .++..+.+ .+.++++ +|... .....+.....++.+.+++++ ..+++++++
T Consensus 225 ~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~i-vG~g~---~~~~~~l~~~~~V~~~G~v~~~~~~~~~adv 300 (397)
T TIGR03087 225 RVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYI-VGAKP---SPAVRALAALPGVTVTGSVADVRPYLAHAAV 300 (397)
T ss_pred cEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEE-ECCCC---hHHHHHhccCCCeEEeeecCCHHHHHHhCCE
Confidence 3455678876533 23333 22222322 3455544 45421 122333334578999999985 458999999
Q ss_pred ccee--ec--CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 266 QGFL--SH--CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 266 ~~~I--th--gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+| ++ .|. +.+.||+++|+|+|+.+...+.. .... |.|+.+. .+.+++.++|.++++|+
T Consensus 301 --~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~~-~~g~lv~---------~~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 301 --AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DALP-GAELLVA---------ADPADFAAAILALLANP 363 (397)
T ss_pred --EEecccccCCcccHHHHHHHcCCCEEecCcccccc-----cccC-CcceEeC---------CCHHHHHHHHHHHHcCH
Confidence 66 32 354 36999999999999987643221 1123 5676654 27899999999999887
Q ss_pred h-hHHHHHHHH
Q 048238 341 K-GEKARTKVK 350 (395)
Q Consensus 341 ~-~~~~~~~a~ 350 (395)
+ .+.+.++++
T Consensus 364 ~~~~~~~~~ar 374 (397)
T TIGR03087 364 AEREELGQAAR 374 (397)
T ss_pred HHHHHHHHHHH
Confidence 4 233444443
No 78
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.00047 Score=65.66 Aligned_cols=224 Identities=17% Similarity=0.147 Sum_probs=123.7
Q ss_pred cceeeeccccccchhhHHHhhhhcCCcccccC-CCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEeccccc
Q 048238 126 SYGMIVNSFYELEPLFADHCNRVVKPKSWCVG-PLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQAE 204 (395)
Q Consensus 126 ~~~vlins~~~le~~~~~~~~~~~~~~~~~vG-pl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~ 204 (395)
+|.++. +.-+|+++++ ..+-+..||| |+....+- .+..+.+.+-+... .+++++.+--||-.+
T Consensus 137 ~D~lLa--ilPFE~~~y~----k~g~~~~yVGHpl~d~i~~--------~~~r~~ar~~l~~~--~~~~~lalLPGSR~s 200 (381)
T COG0763 137 VDHLLA--ILPFEPAFYD----KFGLPCTYVGHPLADEIPL--------LPDREAAREKLGID--ADEKTLALLPGSRRS 200 (381)
T ss_pred hhHeee--ecCCCHHHHH----hcCCCeEEeCChhhhhccc--------cccHHHHHHHhCCC--CCCCeEEEecCCcHH
Confidence 444443 2334566554 2344589999 66544322 33445555555444 678999999999854
Q ss_pred CC---HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCC-C-H-HHHhcccCccceeecCCch
Q 048238 205 IS---AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWV-N-Q-KEILWHESVQGFLSHCGWN 275 (395)
Q Consensus 205 ~~---~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-p-q-~~ll~~~~~~~~IthgG~~ 275 (395)
.- ...+.+.++.++. .+.+|+.-+-.. ..+...+.. ........-++ + + .+++..+|+ .+.-+| +
T Consensus 201 EI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~--al~aSG-T 274 (381)
T COG0763 201 EIRRLLPPFVQAAQELKARYPDLKFVLPLVNA---KYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADA--ALAASG-T 274 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEEEecCcH---HHHHHHHHHhhccccCceEEecCchHHHHHHHhhH--HHHhcc-H
Confidence 21 2334444444442 567887766542 111111111 11111111112 2 2 347788887 777777 4
Q ss_pred hHHHHHhcCCcEEeccCC-CchhHHHHHHhhhhceEEE-------eeccCCCCcCccCHHHHHHHHHHHhCCCh-hHHHH
Q 048238 276 SALESICAGVPILAWPIM-ADQPLNARMVTEEIKVALR-------VETCDGSVRGFVKWQGLEKTVRELMGGEK-GEKAR 346 (395)
Q Consensus 276 s~~Ea~~~GvP~i~~P~~-~DQ~~na~~v~~~lg~g~~-------~~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~ 346 (395)
-+.|+..+|+|||+.=-. .=-++-|++..+.+=+++- +-+ .--..+.+++.|.+++..++.|++ .+.++
T Consensus 275 ~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivP--Eliq~~~~pe~la~~l~~ll~~~~~~~~~~ 352 (381)
T COG0763 275 ATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVP--ELIQEDCTPENLARALEELLLNGDRREALK 352 (381)
T ss_pred HHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccch--HHHhhhcCHHHHHHHHHHHhcChHhHHHHH
Confidence 678999999999976332 1123344444444222221 110 001246889999999999999873 45677
Q ss_pred HHHHHHHHHHHHhhhhCCCchHHHHHHHHHHH
Q 048238 347 TKVKELSEIARKAMEEEKGSSWRCLDMLLDET 378 (395)
Q Consensus 347 ~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~ 378 (395)
+...++++.++ .+ +.++.+.+.+++.+
T Consensus 353 ~~~~~l~~~l~----~~-~~~e~aA~~vl~~~ 379 (381)
T COG0763 353 EKFRELHQYLR----ED-PASEIAAQAVLELL 379 (381)
T ss_pred HHHHHHHHHHc----CC-cHHHHHHHHHHHHh
Confidence 77777777775 33 45666666666544
No 79
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.10 E-value=0.00089 Score=65.85 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=85.5
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHh--CC--CcEEEEEcCCC-C-ccchhHHHHh----cCCCeEEecCCCHH---
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQ--SK--VNFLWVIRKAE-S-ELGDGFEERV----KGRGLVVRDWVNQK--- 257 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~--~~~i~~~~~~~-~-~~~~~~~~~~----~~~~~~~~~~~pq~--- 257 (395)
++.+++..|.+.... .+.+...+..+.+ .+ ..++++-+... . .....+.+.. ...++.+.++++..
T Consensus 218 ~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~ 297 (405)
T TIGR03449 218 DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELV 297 (405)
T ss_pred CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHH
Confidence 345667788875432 3433333333322 22 34444432110 1 1112233222 13579999999854
Q ss_pred HHhcccCccceeec---CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSH---CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~Ith---gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
++++.+++ +|.. -|+ .++.||+++|+|+|+....+ ....+.+. +.|+.++. -+.++++++|
T Consensus 298 ~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~~-~~g~~~~~--------~d~~~la~~i 362 (405)
T TIGR03449 298 HVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVADG-ETGLLVDG--------HDPADWADAL 362 (405)
T ss_pred HHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhccC-CceEECCC--------CCHHHHHHHH
Confidence 48999998 6632 233 58999999999999976532 33445444 67877763 3789999999
Q ss_pred HHHhCCCh-hHHHHHHHHH
Q 048238 334 RELMGGEK-GEKARTKVKE 351 (395)
Q Consensus 334 ~~~l~~~~-~~~~~~~a~~ 351 (395)
.+++++++ .+.+++++++
T Consensus 363 ~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 363 ARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred HHHHhCHHHHHHHHHHHHH
Confidence 99998764 2344555444
No 80
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.09 E-value=0.0032 Score=62.90 Aligned_cols=82 Identities=11% Similarity=0.221 Sum_probs=58.7
Q ss_pred CCCeEEecCCCHHH---Hhccc----CccceeecC---Cc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEe
Q 048238 245 GRGLVVRDWVNQKE---ILWHE----SVQGFLSHC---GW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRV 313 (395)
Q Consensus 245 ~~~~~~~~~~pq~~---ll~~~----~~~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~ 313 (395)
..++.+.+++++.+ +++.+ ++ ||... |+ .+++||+++|+|+|+....+ ....+.+. ..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~~-~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIANC-RNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcCC-CcEEEe
Confidence 35677778877654 46655 66 87654 43 58999999999999886532 34445344 578877
Q ss_pred eccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 314 ETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+. -+.++++++|.++++|++
T Consensus 389 ~~--------~d~~~la~~i~~ll~~~~ 408 (439)
T TIGR02472 389 DV--------LDLEAIASALEDALSDSS 408 (439)
T ss_pred CC--------CCHHHHHHHHHHHHhCHH
Confidence 64 378999999999998873
No 81
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=98.08 E-value=0.00054 Score=66.50 Aligned_cols=100 Identities=15% Similarity=0.225 Sum_probs=69.5
Q ss_pred CCCeEEecCCCH-HHHhcccCccceeecC-C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCc
Q 048238 245 GRGLVVRDWVNQ-KEILWHESVQGFLSHC-G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVR 321 (395)
Q Consensus 245 ~~~~~~~~~~pq-~~ll~~~~~~~~Ithg-G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~ 321 (395)
..++.+.++.++ ..+++.+++-++.++. | ..+++||+++|+|+|+..... .+...+.+. ..|..++.
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~~-~~G~lv~~------ 329 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIEDG-ENGYLVPK------ 329 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHcccC-CCceEeCC------
Confidence 356777777664 4589999994444443 3 458999999999999875421 133445455 67887763
Q ss_pred CccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHH
Q 048238 322 GFVKWQGLEKTVRELMGGEK-GEKARTKVKELSEIA 356 (395)
Q Consensus 322 ~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~ 356 (395)
-+.++++++|.+++.+++ .+.+.+++.+..+.+
T Consensus 330 --~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~ 363 (372)
T cd04949 330 --GDIEALAEAIIELLNDPKLLQKFSEAAYENAERY 363 (372)
T ss_pred --CcHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 478999999999999874 456666666655444
No 82
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.08 E-value=0.00072 Score=65.55 Aligned_cols=131 Identities=12% Similarity=0.177 Sum_probs=80.1
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCH-----HHHhc
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQ-----KEILW 261 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq-----~~ll~ 261 (395)
+.+++..|.........+..+++++... +..++++ |.. +..+.+.+.. .+.++.+.+|+++ .+.++
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~iv-G~g--~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~ 256 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHII-GDG--SDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIK 256 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEE-eCC--ccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHh
Confidence 4556677776432233455566666553 3455444 432 1112232222 2467999998753 23455
Q ss_pred ccCccceeecCC----chhHHHHHhcCCcEEecc-CCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 262 HESVQGFLSHCG----WNSALESICAGVPILAWP-IMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 262 ~~~~~~~IthgG----~~s~~Ea~~~GvP~i~~P-~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
.+++ +|...- -.++.||+++|+|+|+.- ..+ ....+.+. ..|..+.. .+.+++.++|.++
T Consensus 257 ~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~~-~~G~lv~~--------~d~~~la~~i~~l 321 (359)
T PRK09922 257 NVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKPG-LNGELYTP--------GNIDEFVGKLNKV 321 (359)
T ss_pred cCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccCC-CceEEECC--------CCHHHHHHHHHHH
Confidence 6777 665322 479999999999999875 322 22344344 56877763 4899999999999
Q ss_pred hCCCh
Q 048238 337 MGGEK 341 (395)
Q Consensus 337 l~~~~ 341 (395)
++|++
T Consensus 322 ~~~~~ 326 (359)
T PRK09922 322 ISGEV 326 (359)
T ss_pred HhCcc
Confidence 99885
No 83
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.05 E-value=0.0038 Score=59.25 Aligned_cols=133 Identities=15% Similarity=0.124 Sum_probs=76.7
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHH-Hh-cCCCeEEecCCC-HHHHhcccCc
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEE-RV-KGRGLVVRDWVN-QKEILWHESV 265 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~p-q~~ll~~~~~ 265 (395)
+..+++..|+..... .+.+...+..+.. .+.++++.-..........+.. .. ...++.+.+... ...+++.+++
T Consensus 192 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi 271 (365)
T cd03807 192 DTFLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGERSDVPALLNALDV 271 (365)
T ss_pred CCeEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEccccccHHHHHHhCCE
Confidence 455667778775422 2333333333333 3455555433211111111111 11 124566656544 4569999998
Q ss_pred cceeecCCc----hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 266 QGFLSHCGW----NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 266 ~~~IthgG~----~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+|..+.. +++.||+++|+|+|+.... .+...+.+ .|..++. -+.+++.++|.+++++++
T Consensus 272 --~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~~--------~~~~~l~~~i~~l~~~~~ 334 (365)
T cd03807 272 --FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVPP--------GDPEALAEAIEALLADPA 334 (365)
T ss_pred --EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeCC--------CCHHHHHHHHHHHHhChH
Confidence 7765543 7999999999999986543 34444433 4555553 268999999999998863
No 84
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.03 E-value=0.0026 Score=60.57 Aligned_cols=144 Identities=10% Similarity=0.096 Sum_probs=84.1
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHH---HH-hcCCCeEEecCCCHH---HHh
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFE---ER-VKGRGLVVRDWVNQK---EIL 260 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~pq~---~ll 260 (395)
+++.+++..|+.... ..+.+.+.+..+.. .+..+++ +|........... ++ ....++.+.+|+++. .++
T Consensus 201 ~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i-~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 279 (375)
T cd03821 201 PDKRIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVI-AGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAAL 279 (375)
T ss_pred CCCcEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEE-ECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHH
Confidence 345566777877532 23444444444444 3445544 4432111111111 11 124678999999854 368
Q ss_pred cccCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 261 WHESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 261 ~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
..+++ +|... | .+++.||+++|+|+|+.+..+ ....+ .. +.|..... +.+++.++|.++
T Consensus 280 ~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~-~~-~~~~~~~~---------~~~~~~~~i~~l 342 (375)
T cd03821 280 ADADL--FVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELI-EY-GCGWVVDD---------DVDALAAALRRA 342 (375)
T ss_pred hhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHh-hc-CceEEeCC---------ChHHHHHHHHHH
Confidence 88888 55433 2 468999999999999976432 33333 34 77776653 449999999999
Q ss_pred hCCCh-hHHHHHHHHHH
Q 048238 337 MGGEK-GEKARTKVKEL 352 (395)
Q Consensus 337 l~~~~-~~~~~~~a~~l 352 (395)
+++++ .+.+.+++++.
T Consensus 343 ~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 343 LELPQRLKAMGENGRAL 359 (375)
T ss_pred HhCHHHHHHHHHHHHHH
Confidence 98863 23344444333
No 85
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=97.99 E-value=0.0049 Score=61.21 Aligned_cols=81 Identities=12% Similarity=0.044 Sum_probs=55.1
Q ss_pred CCCeEEecCCCHH---HHhcccCccceeecC---Cc-hhHHHHHhcCCcEEeccCCCchhHHHHHHh---hhhceEEEee
Q 048238 245 GRGLVVRDWVNQK---EILWHESVQGFLSHC---GW-NSALESICAGVPILAWPIMADQPLNARMVT---EEIKVALRVE 314 (395)
Q Consensus 245 ~~~~~~~~~~pq~---~ll~~~~~~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~---~~lg~g~~~~ 314 (395)
.+++.+.+++|+. .+|+.+++ +|+.. |+ .++.||+++|+|+|+.-..+. ....+. +. ..|+...
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~g-~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP---LLDIVVPWDGG-PTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC---chheeeccCCC-CceEEeC
Confidence 3578899999865 48888888 55422 22 488999999999998643221 111221 23 4666532
Q ss_pred ccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 315 TCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
+.++++++|.+++++++
T Consensus 378 ----------d~~~la~ai~~ll~~~~ 394 (419)
T cd03806 378 ----------TAEEYAEAIEKILSLSE 394 (419)
T ss_pred ----------CHHHHHHHHHHHHhCCH
Confidence 78999999999998653
No 86
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.95 E-value=0.0018 Score=65.71 Aligned_cols=152 Identities=9% Similarity=0.141 Sum_probs=88.3
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHH----h-CCCcEEEEEcCCCCccchhHHHHhc----CCCeEEecCCCHHHHhccc
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLE----Q-SKVNFLWVIRKAESELGDGFEERVK----GRGLVVRDWVNQKEILWHE 263 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~----~-~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~pq~~ll~~~ 263 (395)
+.+++..|.+... ..+..+++|+. . .+..+ ..+|.. ...+.+.+.+. ..++.+.++.+..++++.+
T Consensus 319 ~~~il~vGrl~~~--Kg~~~li~A~~~l~~~~p~~~l-~i~G~G--~~~~~l~~~i~~~~l~~~V~f~G~~~~~~~~~~a 393 (500)
T TIGR02918 319 PFSIITASRLAKE--KHIDWLVKAVVKAKKSVPELTF-DIYGEG--GEKQKLQKIINENQAQDYIHLKGHRNLSEVYKDY 393 (500)
T ss_pred CeEEEEEeccccc--cCHHHHHHHHHHHHhhCCCeEE-EEEECc--hhHHHHHHHHHHcCCCCeEEEcCCCCHHHHHHhC
Confidence 4456667877542 23333444432 2 33443 334542 11223333222 3568888888888999999
Q ss_pred Cccceeec---CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccC-HHHHHHHHHHHhC
Q 048238 264 SVQGFLSH---CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVK-WQGLEKTVRELMG 338 (395)
Q Consensus 264 ~~~~~Ith---gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~-~~~l~~~i~~~l~ 338 (395)
++ +|.- =|+ .+++||+++|+|+|+.-..+ .+...+.+. ..|..+.... +....-+ .+.++++|.++++
T Consensus 394 dv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~g-~nG~lv~~~~-~~~d~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 394 EL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIEDN-KNGYLIPIDE-EEDDEDQIITALAEKIVEYFN 466 (500)
T ss_pred CE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccCC-CCEEEEeCCc-cccchhHHHHHHHHHHHHHhC
Confidence 98 7653 333 58999999999999975421 133445344 5688776300 0000112 7889999999995
Q ss_pred CChhHHHHHHHHHHHHHH
Q 048238 339 GEKGEKARTKVKELSEIA 356 (395)
Q Consensus 339 ~~~~~~~~~~a~~l~~~~ 356 (395)
++...++.+++.+.++.+
T Consensus 467 ~~~~~~~~~~a~~~a~~f 484 (500)
T TIGR02918 467 SNDIDAFHEYSYQIAEGF 484 (500)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 443456667776655544
No 87
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=97.94 E-value=0.00058 Score=65.29 Aligned_cols=131 Identities=15% Similarity=0.167 Sum_probs=77.0
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhCC--CcEEEEEcCCCCccchhHH----HHhcCCCeEEecCCCHH---HHhc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQSK--VNFLWVIRKAESELGDGFE----ERVKGRGLVVRDWVNQK---EILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~~--~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~pq~---~ll~ 261 (395)
+..+++..|+.... ..+.+.+.+..+...+ ..+++. |...... .... +.....++.+.+++|+. .+++
T Consensus 194 ~~~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~~~-~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 194 PRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGWLN-EELLARLRELGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred CCCeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCcccc-HHHHHHHHHcCCCCeEEECCCCChhHHHHHHh
Confidence 34556667877542 2344444444444433 455444 3321111 1111 12245789999999865 4788
Q ss_pred ccCccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
.+++ +|.. +..+++.||+++|+|+|+....+ ....+ . ..|..+.. -+.+++.++|.+++
T Consensus 272 ~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~-~--~~~~~~~~--------~~~~~~~~~i~~l~ 334 (365)
T cd03809 272 GARA--FVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVA-G--DAALYFDP--------LDPEALAAAIERLL 334 (365)
T ss_pred hhhh--hcccchhccCCCCHHHHhcCCCcEEecCCCC----cccee-c--CceeeeCC--------CCHHHHHHHHHHHh
Confidence 8888 5433 23458999999999999865421 11122 2 23444543 27899999999999
Q ss_pred CCCh
Q 048238 338 GGEK 341 (395)
Q Consensus 338 ~~~~ 341 (395)
.|++
T Consensus 335 ~~~~ 338 (365)
T cd03809 335 EDPA 338 (365)
T ss_pred cCHH
Confidence 8874
No 88
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.94 E-value=0.0019 Score=63.03 Aligned_cols=144 Identities=10% Similarity=0.103 Sum_probs=86.6
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHhC-----CCcEEEEEcCCCCccc------hhHHHHh-----cCCCeEEecC
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQS-----KVNFLWVIRKAESELG------DGFEERV-----KGRGLVVRDW 253 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~-----~~~~i~~~~~~~~~~~------~~~~~~~-----~~~~~~~~~~ 253 (395)
+...+++..|+.... ..+.+.+.+..+... +..++++-+.. .... +.+.+.. ...++.+.++
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~-~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~ 287 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYD-PRVAENVEYLEELQRLAEELLLLEDQVIFLPS 287 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCC-CCCchhHHHHHHHHHHHHHhcCCCceEEEeCC
Confidence 345677778887542 334444444444332 44555443322 1111 2222222 1368999999
Q ss_pred CCHH---HHhcccCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCH
Q 048238 254 VNQK---EILWHESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKW 326 (395)
Q Consensus 254 ~pq~---~ll~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~ 326 (395)
+|.. .++..+++ ++... | ..+++||+++|+|+|+.-..+ ....+.+. +.|..+.. +.
T Consensus 288 ~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~~-~~g~~~~~---------~~ 351 (392)
T cd03805 288 ISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVDG-ETGFLCEP---------TP 351 (392)
T ss_pred CChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhccC-CceEEeCC---------CH
Confidence 9865 47888888 66432 2 257899999999999874432 33445444 56776652 78
Q ss_pred HHHHHHHHHHhCCCh-hHHHHHHHHH
Q 048238 327 QGLEKTVRELMGGEK-GEKARTKVKE 351 (395)
Q Consensus 327 ~~l~~~i~~~l~~~~-~~~~~~~a~~ 351 (395)
+++.++|.+++++++ .+++.+++++
T Consensus 352 ~~~a~~i~~l~~~~~~~~~~~~~a~~ 377 (392)
T cd03805 352 EEFAEAMLKLANDPDLADRMGAAGRK 377 (392)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHH
Confidence 999999999998874 2344444443
No 89
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=97.94 E-value=0.008 Score=58.33 Aligned_cols=133 Identities=15% Similarity=0.159 Sum_probs=79.4
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHH-HhC-----CCcEEEEEcCCCCccchhHHHHhc----CCCeEEecCCC-HHH
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGL-EQS-----KVNFLWVIRKAESELGDGFEERVK----GRGLVVRDWVN-QKE 258 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l-~~~-----~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p-q~~ 258 (395)
+++.++++.|..... ..+.+...+..+ .+. +..++++-.+. ..+.+.+... ..++.+.++.. ..+
T Consensus 192 ~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 268 (374)
T TIGR03088 192 DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP---ARGACEQMVRAAGLAHLVWLPGERDDVPA 268 (374)
T ss_pred CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc---hHHHHHHHHHHcCCcceEEEcCCcCCHHH
Confidence 346677778887642 233333322222 221 34555543321 2223333221 23455655544 456
Q ss_pred HhcccCccceee--c--CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 259 ILWHESVQGFLS--H--CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 259 ll~~~~~~~~It--h--gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
+++.+|+ +|. + |-.++++||+++|+|+|+....+ +...+.+. ..|..++. -+.+++.++|.
T Consensus 269 ~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~~-~~g~~~~~--------~d~~~la~~i~ 333 (374)
T TIGR03088 269 LMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQHG-VTGALVPP--------GDAVALARALQ 333 (374)
T ss_pred HHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcCC-CceEEeCC--------CCHHHHHHHHH
Confidence 8999999 663 2 33468999999999999976533 44455444 56877763 37899999999
Q ss_pred HHhCCCh
Q 048238 335 ELMGGEK 341 (395)
Q Consensus 335 ~~l~~~~ 341 (395)
+++++++
T Consensus 334 ~l~~~~~ 340 (374)
T TIGR03088 334 PYVSDPA 340 (374)
T ss_pred HHHhCHH
Confidence 9998763
No 90
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.88 E-value=0.0014 Score=63.76 Aligned_cols=127 Identities=15% Similarity=0.238 Sum_probs=80.1
Q ss_pred CCCeeEEEecccc--c-CCHHHHHHHHHHHHhCCCcEEEEEcCCC---CccchhHHHHhc-CCCeEEecCCC---HHHHh
Q 048238 191 GSSVMYVAFGSQA--E-ISAQQLKEIATGLEQSKVNFLWVIRKAE---SELGDGFEERVK-GRGLVVRDWVN---QKEIL 260 (395)
Q Consensus 191 ~~~vv~vs~Gs~~--~-~~~~~~~~l~~~l~~~~~~~i~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~p---q~~ll 260 (395)
+++.|+|.+=... . ...+.+..+++++...+.++++...... ....+.+.+... .+++.+.+-++ ...++
T Consensus 200 ~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 200 DKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 3578778775442 2 3457889999999887766666543321 011222222222 46788877655 45588
Q ss_pred cccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEE-eeccCCCCcCccCHHHHHHHHHHHh
Q 048238 261 WHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALR-VETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~-~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
+++++ +||-++.+. .||.+.|+|.|.+- +.+ ...+. |..+. +. .+.++|.+++.+++
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~~-g~nvl~vg---------~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRLR-ADSVIDVD---------PDKEEIVKAIEKLL 337 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc----hhhhh-cCeEEEeC---------CCHHHHHHHHHHHh
Confidence 89999 999886555 99999999999773 311 11133 44333 33 37899999999854
No 91
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=97.87 E-value=0.0051 Score=60.50 Aligned_cols=129 Identities=12% Similarity=0.138 Sum_probs=77.4
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHH---Hhc-CCCeEEecCCCHH---HHhc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEE---RVK-GRGLVVRDWVNQK---EILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~pq~---~ll~ 261 (395)
++.+++..|..... ..+.+.+.+..+.+ .+..++++-++. ..+.+.+ +.. ..++.+.+|+++. .+++
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~---~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP---KRILLEEMREKYNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc---hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHH
Confidence 45677777877542 23444444444433 345555443321 1222322 222 3568888999854 4888
Q ss_pred ccCccceeecC---Cc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFLSHC---GW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
.+++ +|.-. |. .++.||+++|+|+|+.+..+ ....+ .. |.+.... . +.+++.+++.+++
T Consensus 269 ~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~--------~-~~~~l~~~l~~~l 331 (398)
T cd03796 269 QGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE--------P-DVESIVRKLEEAI 331 (398)
T ss_pred hCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC--------C-CHHHHHHHHHHHH
Confidence 8998 66432 33 49999999999999977643 22333 34 4443332 2 7899999999999
Q ss_pred CCC
Q 048238 338 GGE 340 (395)
Q Consensus 338 ~~~ 340 (395)
++.
T Consensus 332 ~~~ 334 (398)
T cd03796 332 SIL 334 (398)
T ss_pred hCh
Confidence 764
No 92
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.87 E-value=0.0002 Score=61.44 Aligned_cols=145 Identities=17% Similarity=0.210 Sum_probs=89.5
Q ss_pred CCCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCC--ccchhHHHHhcCCCeEEecCCCH---HHHhcc
Q 048238 191 GSSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAES--ELGDGFEERVKGRGLVVRDWVNQ---KEILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~pq---~~ll~~ 262 (395)
+++.+++..|..... ..+.+..++.-+.. .+.-.++++|.... .+-..........++.+.++.++ ..++..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~~ 92 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYVPDDELDELYKS 92 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESHSHHHHHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccccccccccccccc
Confidence 567777788888653 34444444444432 23334455552100 01111111123467888898872 458888
Q ss_pred cCccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 263 ESVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 263 ~~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+++ +|+. +...++.||+++|+|+|+. +...+...+.+. +.|+.++. .+.+++.++|.+++.
T Consensus 93 ~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~~-~~g~~~~~--------~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 93 SDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIINDG-VNGFLFDP--------NDIEELADAIEKLLN 157 (172)
T ss_dssp TSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGTT-TSEEEEST--------TSHHHHHHHHHHHHH
T ss_pred cee--ccccccccccccccccccccccceeec----cccCCceeeccc-cceEEeCC--------CCHHHHHHHHHHHHC
Confidence 888 7776 5567999999999999986 355666666555 77998874 399999999999998
Q ss_pred CCh-hHHHHHHHH
Q 048238 339 GEK-GEKARTKVK 350 (395)
Q Consensus 339 ~~~-~~~~~~~a~ 350 (395)
+++ .+.+.++++
T Consensus 158 ~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 158 DPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhc
Confidence 763 234444444
No 93
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=97.86 E-value=0.0075 Score=63.26 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=59.0
Q ss_pred CCCeEEecCCCH-HHHhcccCccceee---cCCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCC
Q 048238 245 GRGLVVRDWVNQ-KEILWHESVQGFLS---HCGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGS 319 (395)
Q Consensus 245 ~~~~~~~~~~pq-~~ll~~~~~~~~It---hgG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~ 319 (395)
.+++.+.+|.+. ..+++.+++ ||. +-|+ ++++||+++|+|+|+.... .....+.+. ..|+.++.
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV~dg-~~GlLv~~---- 641 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAVQEG-VTGLTLPA---- 641 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHccCC-CCEEEeCC----
Confidence 467888899875 458999998 664 4454 6899999999999997643 244455444 57888875
Q ss_pred CcCccCHHHHHHHHHHHhCC
Q 048238 320 VRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~ 339 (395)
++.+.+++.+++.+++.+
T Consensus 642 --~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 642 --DTVTAPDVAEALARIHDM 659 (694)
T ss_pred --CCCChHHHHHHHHHHHhC
Confidence 555667777777776653
No 94
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.86 E-value=0.0074 Score=60.96 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=81.3
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCC--CccchhHHHHh----cCCCeEEecCCCHHHHhcc
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAE--SELGDGFEERV----KGRGLVVRDWVNQKEILWH 262 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~pq~~ll~~ 262 (395)
.+.+++..|.+.... .+.+.+.+..+.+ .+.++ +++|... ....+.+.+.. ...++.+.+.....++++.
T Consensus 292 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l-~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G~~~v~~~l~~ 370 (475)
T cd03813 292 EPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEG-WVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEYLPK 370 (475)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEE-EEECCCCcChHHHHHHHHHHHHhCCCCeEEEcCCccHHHHHHh
Confidence 445666678876432 3443333333333 23444 4555431 11112222222 2467888886667789999
Q ss_pred cCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhh----h-ceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 263 ESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEE----I-KVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 263 ~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~----l-g~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
+++ +|... | -++++||+++|+|+|+... ......+.+. + ..|..++. .+.+++.++|
T Consensus 371 aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~~~~~~~g~~G~lv~~--------~d~~~la~ai 436 (475)
T cd03813 371 LDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEGADDEALGPAGEVVPP--------ADPEALARAI 436 (475)
T ss_pred CCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcCCcccccCCceEEECC--------CCHHHHHHHH
Confidence 998 66443 2 3689999999999999543 2333444331 1 26777763 4789999999
Q ss_pred HHHhCCCh
Q 048238 334 RELMGGEK 341 (395)
Q Consensus 334 ~~~l~~~~ 341 (395)
.++++|++
T Consensus 437 ~~ll~~~~ 444 (475)
T cd03813 437 LRLLKDPE 444 (475)
T ss_pred HHHhcCHH
Confidence 99999874
No 95
>PLN02949 transferase, transferring glycosyl groups
Probab=97.84 E-value=0.009 Score=59.99 Aligned_cols=93 Identities=11% Similarity=0.090 Sum_probs=56.8
Q ss_pred CCCeEEecCCCHHH---HhcccCccceee---cCCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhh--hhceEEEeec
Q 048238 245 GRGLVVRDWVNQKE---ILWHESVQGFLS---HCGW-NSALESICAGVPILAWPIMADQPLNARMVTE--EIKVALRVET 315 (395)
Q Consensus 245 ~~~~~~~~~~pq~~---ll~~~~~~~~It---hgG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~--~lg~g~~~~~ 315 (395)
.+++.+.+++|+.+ +|+.+++ +|. +=|+ .++.||+++|+|+|+....+-- ...+.+ .-..|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC--
Confidence 46788889998554 7888887 663 2233 3799999999999998543200 000100 00123222
Q ss_pred cCCCCcCccCHHHHHHHHHHHhCCC-h-hHHHHHHHHHH
Q 048238 316 CDGSVRGFVKWQGLEKTVRELMGGE-K-GEKARTKVKEL 352 (395)
Q Consensus 316 ~~~~~~~~~~~~~l~~~i~~~l~~~-~-~~~~~~~a~~l 352 (395)
-+.++++++|.++++++ + .+++.+++++.
T Consensus 407 --------~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~ 437 (463)
T PLN02949 407 --------TTVEEYADAILEVLRMRETERLEIAAAARKR 437 (463)
T ss_pred --------CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 17899999999999853 2 23455555443
No 96
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.77 E-value=0.0073 Score=65.31 Aligned_cols=94 Identities=14% Similarity=0.140 Sum_probs=64.7
Q ss_pred CCCeEEecCCCHHH---Hhccc----CccceeecC---Cc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEe
Q 048238 245 GRGLVVRDWVNQKE---ILWHE----SVQGFLSHC---GW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRV 313 (395)
Q Consensus 245 ~~~~~~~~~~pq~~---ll~~~----~~~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~ 313 (395)
..++.+.+++++.+ ++..+ ++ ||.-. |+ .+++||+++|+|+|+....+ ....+... ..|+.+
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DV--FV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~g-~nGlLV 619 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRVL-DNGLLV 619 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCe--eeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhccC-CcEEEE
Confidence 35677888887654 56655 35 77652 43 58899999999999986533 22333333 568877
Q ss_pred eccCCCCcCccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHH
Q 048238 314 ETCDGSVRGFVKWQGLEKTVRELMGGEK-GEKARTKVKELS 353 (395)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~ 353 (395)
+. .+.+.|+++|.++++|++ .+.+.+++.+..
T Consensus 620 dP--------~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v 652 (1050)
T TIGR02468 620 DP--------HDQQAIADALLKLVADKQLWAECRQNGLKNI 652 (1050)
T ss_pred CC--------CCHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 64 478999999999999875 455666655543
No 97
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=97.74 E-value=0.0068 Score=58.08 Aligned_cols=131 Identities=16% Similarity=0.129 Sum_probs=80.1
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCH-HHHhccc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQ-KEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq-~~ll~~~ 263 (395)
++.+++..|+.... ..+.+.+.+..+.+ .+.+++++-+.. ....+.+.. ...++.+.++..+ .++++.+
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 267 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE---LEEEIKKKVKELGLEDKVIFLGVRNDVPELLQAM 267 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc---hHHHHHHHHHhcCCCCcEEEecccCCHHHHHHhc
Confidence 45666777877543 23445555555543 244555543221 112222211 2457888887543 5689999
Q ss_pred Cccceeec----CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 264 SVQGFLSH----CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 264 ~~~~~Ith----gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
++ +|.- |-.++++||+++|+|+|+....+ ....+ .. +.|..... -++++++++|.++++|
T Consensus 268 di--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~~--------~~~~~~a~~i~~l~~~ 331 (358)
T cd03812 268 DV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSLD--------ESPEIWAEEILKLKSE 331 (358)
T ss_pred CE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeCC--------CCHHHHHHHHHHHHhC
Confidence 98 6654 33578999999999999876543 22333 33 55555442 2589999999999998
Q ss_pred Ch
Q 048238 340 EK 341 (395)
Q Consensus 340 ~~ 341 (395)
++
T Consensus 332 ~~ 333 (358)
T cd03812 332 DR 333 (358)
T ss_pred cc
Confidence 84
No 98
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.74 E-value=0.00098 Score=65.88 Aligned_cols=136 Identities=14% Similarity=0.222 Sum_probs=81.4
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHhC--CCcEEEE-EcCCCCccchhHHHHh----cCCCeEEecCCCHHH---Hh
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQS--KVNFLWV-IRKAESELGDGFEERV----KGRGLVVRDWVNQKE---IL 260 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~~--~~~~i~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq~~---ll 260 (395)
++..+++.|.+.... .+.+.+.+..+... +..+.|. +|.. .....+.+.. ...++.+.+|+++.+ ++
T Consensus 229 ~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g--~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~ 306 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGG--PLEDTLKELAESKPENISVNFTGELSNSEVYKLY 306 (407)
T ss_pred CCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCc--hHHHHHHHHHHhcCCCceEEEecCCChHHHHHHH
Confidence 455667778775432 33333333333332 2455543 3332 1112232222 245688899999664 55
Q ss_pred cccCccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 261 WHESVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 261 ~~~~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
..+++.+||...- -++++||+++|+|+|+....+ ....+.+. +.|..+.. ..+.+++.++|.++
T Consensus 307 ~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~~-~~G~l~~~-------~~~~~~la~~I~~l 374 (407)
T cd04946 307 KENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDNG-GNGLLLSK-------DPTPNELVSSLSKF 374 (407)
T ss_pred hhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcCC-CcEEEeCC-------CCCHHHHHHHHHHH
Confidence 5444434776553 368999999999999865432 44555333 48887763 45789999999999
Q ss_pred hCCCh
Q 048238 337 MGGEK 341 (395)
Q Consensus 337 l~~~~ 341 (395)
++|++
T Consensus 375 l~~~~ 379 (407)
T cd04946 375 IDNEE 379 (407)
T ss_pred HhCHH
Confidence 98774
No 99
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.73 E-value=0.0068 Score=57.90 Aligned_cols=136 Identities=16% Similarity=0.185 Sum_probs=80.0
Q ss_pred hHHHHHhhhccCCCCCeeEEEeccccc----CCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEE-ec
Q 048238 178 PAWIRWLDRKLDEGSSVMYVAFGSQAE----ISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVV-RD 252 (395)
Q Consensus 178 ~~l~~~l~~~~~~~~~vv~vs~Gs~~~----~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 252 (395)
++..+-+.. ++++.|++-+-+... .....+.++++.|++.+..++...+.. +... ..+ .-++.+ ..
T Consensus 168 ~~vl~~lg~---~~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~--~~~~-~~~---~~~~~i~~~ 238 (335)
T PF04007_consen 168 PEVLKELGL---DDEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYE--DQRE-LFE---KYGVIIPPE 238 (335)
T ss_pred hhHHHHcCC---CCCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCc--chhh-HHh---ccCccccCC
Confidence 344444442 256788887776422 234557788899988887755554332 1111 111 112322 23
Q ss_pred CCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHH
Q 048238 253 WVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKT 332 (395)
Q Consensus 253 ~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~ 332 (395)
-+.-.++|.++++ +|+-|| ++..||...|+|.|.+ +-++-...-+.+.++ |. ... .-+.+++.+.
T Consensus 239 ~vd~~~Ll~~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~--------~~~~~ei~~~ 303 (335)
T PF04007_consen 239 PVDGLDLLYYADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYH--------STDPDEIVEY 303 (335)
T ss_pred CCCHHHHHHhcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEe--------cCCHHHHHHH
Confidence 3445689999999 999887 8889999999999964 222321222445566 65 222 2367777776
Q ss_pred HHHHh
Q 048238 333 VRELM 337 (395)
Q Consensus 333 i~~~l 337 (395)
+++.+
T Consensus 304 v~~~~ 308 (335)
T PF04007_consen 304 VRKNL 308 (335)
T ss_pred HHHhh
Confidence 65543
No 100
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.72 E-value=0.0014 Score=64.72 Aligned_cols=132 Identities=13% Similarity=0.162 Sum_probs=81.4
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCHHH---Hhc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQS--KVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQKE---ILW 261 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq~~---ll~ 261 (395)
.+..+++.|..... ..+.+.+.+..+.+. +.++++ +|.. +..+.+.+.. ...++.+.+|+|+.+ +++
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i-vG~G--~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~ 297 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRI-LGIG--PWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLD 297 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEE-EECc--hhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHH
Confidence 34556667777532 223333333444333 344444 3432 1222333222 245788999998754 788
Q ss_pred ccCccceeec---------CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHH
Q 048238 262 HESVQGFLSH---------CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEK 331 (395)
Q Consensus 262 ~~~~~~~Ith---------gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~ 331 (395)
.+++ ||.- -|. ++++||+++|+|+|+....+ ....+.+. ..|+.++. -+.+++++
T Consensus 298 ~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~~-~~G~lv~~--------~d~~~la~ 362 (406)
T PRK15427 298 DADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEAD-KSGWLVPE--------NDAQALAQ 362 (406)
T ss_pred hCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcCC-CceEEeCC--------CCHHHHHH
Confidence 8998 6653 244 57899999999999975432 33444344 57887763 37999999
Q ss_pred HHHHHhC-CCh
Q 048238 332 TVRELMG-GEK 341 (395)
Q Consensus 332 ~i~~~l~-~~~ 341 (395)
+|.++++ |++
T Consensus 363 ai~~l~~~d~~ 373 (406)
T PRK15427 363 RLAAFSQLDTD 373 (406)
T ss_pred HHHHHHhCCHH
Confidence 9999998 764
No 101
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=97.70 E-value=0.012 Score=57.33 Aligned_cols=143 Identities=12% Similarity=0.104 Sum_probs=79.3
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCCC-ccchh-HHH---Hh-cCCCeEEecCC--CH---H
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAES-ELGDG-FEE---RV-KGRGLVVRDWV--NQ---K 257 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~-~~~~~-~~~---~~-~~~~~~~~~~~--pq---~ 257 (395)
+..+++..|.+.... .+.+.+.+..+.+ .+.+++++-++... ..... +.+ .. ...++.+.++. +. .
T Consensus 189 ~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 268 (372)
T cd03792 189 ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVN 268 (372)
T ss_pred CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHH
Confidence 345666778775432 3444444443433 34555554433211 11111 111 11 23467777776 33 2
Q ss_pred HHhcccCccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
.+++.+++ |+..+- ..++.||+++|+|+|+....+ ....+.+. ..|+.++ +.+.++.+|
T Consensus 269 ~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~~-~~g~~~~----------~~~~~a~~i 331 (372)
T cd03792 269 ALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIEDG-ETGFLVD----------TVEEAAVRI 331 (372)
T ss_pred HHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhcccC-CceEEeC----------CcHHHHHHH
Confidence 57888888 776542 348999999999999876432 22334344 5676554 346778899
Q ss_pred HHHhCCCh-hHHHHHHHHH
Q 048238 334 RELMGGEK-GEKARTKVKE 351 (395)
Q Consensus 334 ~~~l~~~~-~~~~~~~a~~ 351 (395)
.+++.+++ .+.+.+++++
T Consensus 332 ~~ll~~~~~~~~~~~~a~~ 350 (372)
T cd03792 332 LYLLRDPELRRKMGANARE 350 (372)
T ss_pred HHHHcCHHHHHHHHHHHHH
Confidence 99998763 2333344433
No 102
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.70 E-value=0.0034 Score=61.47 Aligned_cols=83 Identities=12% Similarity=0.134 Sum_probs=60.8
Q ss_pred CCCeEEecCCCHH---HHhcccCccceeecC----Cc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeecc
Q 048238 245 GRGLVVRDWVNQK---EILWHESVQGFLSHC----GW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETC 316 (395)
Q Consensus 245 ~~~~~~~~~~pq~---~ll~~~~~~~~Ithg----G~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~ 316 (395)
+.++.+.+++|+. .+++.+|+ +|... |. .+++||+++|+|+|+....+ +...+.+. ..|..+.
T Consensus 256 ~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~~-~~G~~l~-- 326 (380)
T PRK15484 256 GDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLEG-ITGYHLA-- 326 (380)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhcccC-CceEEEe--
Confidence 4578888999854 47999999 77543 33 57789999999999986532 34445444 5677554
Q ss_pred CCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 317 DGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 317 ~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
...+.++++++|.++++|++
T Consensus 327 -----~~~d~~~la~~I~~ll~d~~ 346 (380)
T PRK15484 327 -----EPMTSDSIISDINRTLADPE 346 (380)
T ss_pred -----CCCCHHHHHHHHHHHHcCHH
Confidence 23479999999999999873
No 103
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.64 E-value=0.00086 Score=54.06 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=71.8
Q ss_pred eEEEecccccCCHHHHH--HHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCC--C-HHHHhcccCcccee
Q 048238 195 MYVAFGSQAEISAQQLK--EIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWV--N-QKEILWHESVQGFL 269 (395)
Q Consensus 195 v~vs~Gs~~~~~~~~~~--~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p-q~~ll~~~~~~~~I 269 (395)
++|+-||....-...+. ++.+-.+....++|+.+|+.. ..| + .+..+.+|. + ...+...+++ +|
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d-~kp------v--agl~v~~F~~~~kiQsli~darI--VI 70 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD-IKP------V--AGLRVYGFDKEEKIQSLIHDARI--VI 70 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC-ccc------c--cccEEEeechHHHHHHHhhcceE--EE
Confidence 78999998431111111 122222334567899998741 121 0 234444543 4 3457778887 99
Q ss_pred ecCCchhHHHHHhcCCcEEeccCCC--------chhHHHHHHhhhhceEEEeec
Q 048238 270 SHCGWNSALESICAGVPILAWPIMA--------DQPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 270 thgG~~s~~Ea~~~GvP~i~~P~~~--------DQ~~na~~v~~~lg~g~~~~~ 315 (395)
+|||.||++.++..++|.|++|--. +|..-|..+++. +.=+.+..
T Consensus 71 SHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae~-~~vv~~sp 123 (161)
T COG5017 71 SHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEI-NYVVACSP 123 (161)
T ss_pred eccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhc-CceEEEcC
Confidence 9999999999999999999999732 466678888777 77777764
No 104
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.57 E-value=0.00076 Score=66.75 Aligned_cols=153 Identities=16% Similarity=0.213 Sum_probs=82.5
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh-----cCCCeEEecCCCHHH---Hhc
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV-----KGRGLVVRDWVNQKE---ILW 261 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~pq~~---ll~ 261 (395)
++..++|.+|......+++.+..-.+-|++.+...+|....+.. -...+.++. ....+.+.++.++.+ .+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~ 360 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS-GEARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQ 360 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT-HHHHHHHHHHHTTS-GGGEEEEE---HHHHHHHGG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-HHHHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhh
Confidence 35679999999999999999999999999989888888765421 112222221 245677878877655 345
Q ss_pred ccCcccee---ecCCchhHHHHHhcCCcEEeccCCCch-hHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFL---SHCGWNSALESICAGVPILAWPIMADQ-PLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~I---thgG~~s~~Ea~~~GvP~i~~P~~~DQ-~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
..|+ ++ ..+|++|++||++.|||+|.+|--.=. ..-|..+ ..+|+.-.+-. +.++-.+..-++-
T Consensus 361 ~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL-~~lGl~ElIA~---------s~~eYv~~Av~La 428 (468)
T PF13844_consen 361 LADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASIL-RALGLPELIAD---------SEEEYVEIAVRLA 428 (468)
T ss_dssp G-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHH-HHHT-GGGB-S---------SHHHHHHHHHHHH
T ss_pred hCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHH-HHcCCchhcCC---------CHHHHHHHHHHHh
Confidence 5666 54 356889999999999999999953222 2233444 44477655542 4555444444555
Q ss_pred CCChhHHHHHHHHHHHHHHH
Q 048238 338 GGEKGEKARTKVKELSEIAR 357 (395)
Q Consensus 338 ~~~~~~~~~~~a~~l~~~~~ 357 (395)
+|.+ ..++--+++++...
T Consensus 429 ~D~~--~l~~lR~~Lr~~~~ 446 (468)
T PF13844_consen 429 TDPE--RLRALRAKLRDRRS 446 (468)
T ss_dssp H-HH--HHHHHHHHHHHHHH
T ss_pred CCHH--HHHHHHHHHHHHHh
Confidence 6663 33333344444443
No 105
>PLN02275 transferase, transferring glycosyl groups
Probab=97.47 E-value=0.033 Score=54.31 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=52.9
Q ss_pred CCeEEec-CCCHHH---HhcccCccceee-c-----CC-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEee
Q 048238 246 RGLVVRD-WVNQKE---ILWHESVQGFLS-H-----CG-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVE 314 (395)
Q Consensus 246 ~~~~~~~-~~pq~~---ll~~~~~~~~It-h-----gG-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~ 314 (395)
.|+.+.. |+|+.+ +|+.+|+ +|. + -| -+++.||+++|+|+|+.... .+...+.+. +.|+.++
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~g-~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKDG-KNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccCC-CCeEEEC
Confidence 4566644 788654 6999999 763 1 12 25799999999999997532 255666555 6898764
Q ss_pred ccCCCCcCccCHHHHHHHHHHHh
Q 048238 315 TCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
+.++++++|.+++
T Consensus 359 ----------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ----------SSSELADQLLELL 371 (371)
T ss_pred ----------CHHHHHHHHHHhC
Confidence 4788999888764
No 106
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.43 E-value=0.0033 Score=60.22 Aligned_cols=129 Identities=13% Similarity=0.123 Sum_probs=77.4
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh----cCCCeEEecCCCH-HHHhccc
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV----KGRGLVVRDWVNQ-KEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~pq-~~ll~~~ 263 (395)
+..+++..|+..... .+.+.+.+..+.. .+.+++++-++. ..+.+.+.. ...++.+.++..+ ..+++.+
T Consensus 187 ~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~a 263 (360)
T cd04951 187 DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP---LRATLERLIKALGLSNRVKLLGLRDDIAAYYNAA 263 (360)
T ss_pred CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC---cHHHHHHHHHhcCCCCcEEEecccccHHHHHHhh
Confidence 456777778764322 2333333333332 246666654332 122232221 2357888887754 5689999
Q ss_pred CccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 264 SVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 264 ~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
++ +|.-.. .+++.||+++|+|+|+.. ...+...+.+ .|..+.. .+.+++.+++.+++++
T Consensus 264 d~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~~----~~~~~e~i~~---~g~~~~~--------~~~~~~~~~i~~ll~~ 326 (360)
T cd04951 264 DL--FVLSSAWEGFGLVVAEAMACELPVVATD----AGGVREVVGD---SGLIVPI--------SDPEALANKIDEILKM 326 (360)
T ss_pred ce--EEecccccCCChHHHHHHHcCCCEEEec----CCChhhEecC---CceEeCC--------CCHHHHHHHHHHHHhC
Confidence 98 665443 468999999999999753 3445555544 3334442 3788999999999854
Q ss_pred C
Q 048238 340 E 340 (395)
Q Consensus 340 ~ 340 (395)
+
T Consensus 327 ~ 327 (360)
T cd04951 327 S 327 (360)
T ss_pred C
Confidence 3
No 107
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.40 E-value=0.083 Score=50.53 Aligned_cols=124 Identities=19% Similarity=0.281 Sum_probs=69.6
Q ss_pred EEEecccccCCHHHHHHHHHHHHhC--CCcEEEEEcCCC-CccchhHHHH-hcCCCeEEecCCCHHH---HhcccCccce
Q 048238 196 YVAFGSQAEISAQQLKEIATGLEQS--KVNFLWVIRKAE-SELGDGFEER-VKGRGLVVRDWVNQKE---ILWHESVQGF 268 (395)
Q Consensus 196 ~vs~Gs~~~~~~~~~~~l~~~l~~~--~~~~i~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~pq~~---ll~~~~~~~~ 268 (395)
++..|+.... ..+..+++++... +.+++++-+... ......+.++ ...+++.+.+++++.+ ++..+++ +
T Consensus 196 i~~~G~~~~~--Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~--~ 271 (363)
T cd04955 196 YLLVGRIVPE--NNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL--F 271 (363)
T ss_pred EEEEeccccc--CCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE--E
Confidence 4567877532 2233445555443 455554433211 1111222211 2356899999998754 6777777 5
Q ss_pred eecCCc-----hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 269 LSHCGW-----NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 269 IthgG~-----~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+.+.-. +++.||+++|+|+|+....+ +...+.+ .|..+.. . + .+.++|.++++++
T Consensus 272 v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~------~--~--~l~~~i~~l~~~~ 331 (363)
T cd04955 272 YLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKV------G--D--DLASLLEELEADP 331 (363)
T ss_pred EeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecC------c--h--HHHHHHHHHHhCH
Confidence 554433 47999999999999875432 1122211 2333332 1 1 2999999999876
No 108
>PLN02846 digalactosyldiacylglycerol synthase
Probab=97.29 E-value=0.067 Score=53.46 Aligned_cols=74 Identities=12% Similarity=0.151 Sum_probs=52.1
Q ss_pred EEecCCCHHHHhcccCccceeecCC----chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCcc
Q 048238 249 VVRDWVNQKEILWHESVQGFLSHCG----WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFV 324 (395)
Q Consensus 249 ~~~~~~pq~~ll~~~~~~~~IthgG----~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~ 324 (395)
++.++.+..++++..|+ ||.-+- .++++||+++|+|+|+.-..+ | ..+.+. +.|...+
T Consensus 287 vf~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~~-~ng~~~~---------- 348 (462)
T PLN02846 287 VYPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQF-PNCRTYD---------- 348 (462)
T ss_pred EECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeecC-CceEecC----------
Confidence 35566666679999998 887743 468999999999999985432 2 333233 4444332
Q ss_pred CHHHHHHHHHHHhCCC
Q 048238 325 KWQGLEKTVRELMGGE 340 (395)
Q Consensus 325 ~~~~l~~~i~~~l~~~ 340 (395)
+.+++.+++.++|.++
T Consensus 349 ~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 349 DGKGFVRATLKALAEE 364 (462)
T ss_pred CHHHHHHHHHHHHccC
Confidence 6789999999999754
No 109
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.27 E-value=0.052 Score=52.09 Aligned_cols=138 Identities=16% Similarity=0.234 Sum_probs=86.5
Q ss_pred CCCeeEEEecccccCCHHHHHHHHH----HHHhC-CCcEEEEEcCCCCccchhHH-HHhc-CCCeEEec---CCCHHHHh
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIAT----GLEQS-KVNFLWVIRKAESELGDGFE-ERVK-GRGLVVRD---WVNQKEIL 260 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~----~l~~~-~~~~i~~~~~~~~~~~~~~~-~~~~-~~~~~~~~---~~pq~~ll 260 (395)
.+..+++++=-..+.. +.+..+.+ .++.. +..||..+... ..-.++. .+.+ .+++.+.+ |.+...++
T Consensus 203 ~~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~--~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~ 279 (383)
T COG0381 203 DKKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPR--PRVRELVLKRLKNVERVKLIDPLGYLDFHNLM 279 (383)
T ss_pred cCcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCC--hhhhHHHHHHhCCCCcEEEeCCcchHHHHHHH
Confidence 3668888755444433 33344444 44443 55666555432 1111221 2222 34566544 55667789
Q ss_pred cccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 261 WHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
.++-+ ++|-+| |-.-||-..|+|++++=...+++. .+ +. |.-..+. .+.+.|.+++.++++++
T Consensus 280 ~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg---------~~~~~i~~~~~~ll~~~ 342 (383)
T COG0381 280 KNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVG---------TDEENILDAATELLEDE 342 (383)
T ss_pred HhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC---------ccHHHHHHHHHHHhhCh
Confidence 99877 999887 456799999999999988888887 23 55 6655554 37799999999999887
Q ss_pred hhHHHHHHHHH
Q 048238 341 KGEKARTKVKE 351 (395)
Q Consensus 341 ~~~~~~~~a~~ 351 (395)
...++...
T Consensus 343 ---~~~~~m~~ 350 (383)
T COG0381 343 ---EFYERMSN 350 (383)
T ss_pred ---HHHHHHhc
Confidence 45444333
No 110
>PLN00142 sucrose synthase
Probab=97.25 E-value=0.15 Score=54.15 Aligned_cols=72 Identities=10% Similarity=0.176 Sum_probs=46.7
Q ss_pred cCccceeec---CCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH--
Q 048238 263 ESVQGFLSH---CGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL-- 336 (395)
Q Consensus 263 ~~~~~~Ith---gG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~-- 336 (395)
+++ ||.- =|+ .++.||+++|+|+|+....+ ....|.+- ..|+.++. .+.++++++|.++
T Consensus 667 aDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~dG-~tG~LV~P--------~D~eaLA~aI~~lLe 731 (815)
T PLN00142 667 KGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVDG-VSGFHIDP--------YHGDEAANKIADFFE 731 (815)
T ss_pred CCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcCC-CcEEEeCC--------CCHHHHHHHHHHHHH
Confidence 455 7654 344 48999999999999875433 44455444 57888874 3677888887664
Q ss_pred --hCCCh-hHHHHHHH
Q 048238 337 --MGGEK-GEKARTKV 349 (395)
Q Consensus 337 --l~~~~-~~~~~~~a 349 (395)
+.|++ ++.+.+++
T Consensus 732 kLl~Dp~lr~~mg~~A 747 (815)
T PLN00142 732 KCKEDPSYWNKISDAG 747 (815)
T ss_pred HhcCCHHHHHHHHHHH
Confidence 45664 34444444
No 111
>PLN02501 digalactosyldiacylglycerol synthase
Probab=97.10 E-value=0.23 Score=51.64 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=52.7
Q ss_pred CeEEecCCCHH-HHhcccCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCc
Q 048238 247 GLVVRDWVNQK-EILWHESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVR 321 (395)
Q Consensus 247 ~~~~~~~~pq~-~ll~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~ 321 (395)
++.+.++.++. ++++.+++ ||.-+ | -++++||+++|+|+|+.-..+... + .. |.+..+..
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V-~~-g~nGll~~------ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----F-RS-FPNCLTYK------ 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----E-ee-cCCeEecC------
Confidence 36666777754 59999998 77643 3 368899999999999986654221 2 22 22222222
Q ss_pred CccCHHHHHHHHHHHhCCC
Q 048238 322 GFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 322 ~~~~~~~l~~~i~~~l~~~ 340 (395)
+.+++.++|.+++.++
T Consensus 667 ---D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 667 ---TSEDFVAKVKEALANE 682 (794)
T ss_pred ---CHHHHHHHHHHHHhCc
Confidence 6899999999999877
No 112
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=97.01 E-value=0.64 Score=49.43 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=56.8
Q ss_pred CCeEEecCC-C---HHHHhcc----cCccceeecC---C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEe
Q 048238 246 RGLVVRDWV-N---QKEILWH----ESVQGFLSHC---G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRV 313 (395)
Q Consensus 246 ~~~~~~~~~-p---q~~ll~~----~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~ 313 (395)
.++.+.++. + ..+++.+ +++ ||.-. | ..+++||+++|+|+|+.-.. -.+..|.+. ..|+.+
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adV--fV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV~dg-~tGfLV 691 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGI--FVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEIIQDG-VSGFHI 691 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcE--EEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHhcCC-CcEEEe
Confidence 467776664 3 2345542 234 77543 2 25899999999999987543 345556555 679888
Q ss_pred eccCCCCcCccCHHHHHHHHHHHh----CCCh-hHHHHHHH
Q 048238 314 ETCDGSVRGFVKWQGLEKTVRELM----GGEK-GEKARTKV 349 (395)
Q Consensus 314 ~~~~~~~~~~~~~~~l~~~i~~~l----~~~~-~~~~~~~a 349 (395)
+. -+.++++++|.+++ .|++ ++.+.+++
T Consensus 692 dp--------~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a 724 (784)
T TIGR02470 692 DP--------YHGEEAAEKIVDFFEKCDEDPSYWQKISQGG 724 (784)
T ss_pred CC--------CCHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 74 37888999998876 4553 34444443
No 113
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=96.88 E-value=0.0031 Score=51.58 Aligned_cols=124 Identities=20% Similarity=0.265 Sum_probs=65.3
Q ss_pred eEEEeccccc-CCHHHHHH-HHHHHHh--CCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCH-HHHhcccCcccee
Q 048238 195 MYVAFGSQAE-ISAQQLKE-IATGLEQ--SKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQ-KEILWHESVQGFL 269 (395)
Q Consensus 195 v~vs~Gs~~~-~~~~~~~~-l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq-~~ll~~~~~~~~I 269 (395)
.++++|+... ...+.+.+ .+..+.+ .+..+.+ +|.. ++.+.+. ..+|+.+.+|++. .++++.+++.+..
T Consensus 4 ~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i-~G~~----~~~l~~~-~~~~v~~~g~~~e~~~~l~~~dv~l~p 77 (135)
T PF13692_consen 4 YIGYLGRIRPDKGLEELIEAALERLKEKHPDIELII-IGNG----PDELKRL-RRPNVRFHGFVEELPEILAAADVGLIP 77 (135)
T ss_dssp EEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEE-ECES----S-HHCCH-HHCTEEEE-S-HHHHHHHHC-SEEEE-
T ss_pred cccccccccccccccchhhhHHHHHHHHCcCEEEEE-EeCC----HHHHHHh-cCCCEEEcCCHHHHHHHHHhCCEEEEE
Confidence 3445555543 33344444 5555544 3344444 3332 1122222 2469999999964 4488999995554
Q ss_pred ecC--C-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 270 SHC--G-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 270 thg--G-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
+.. | -+.+.|++++|+|+|+.+.. ....++.. +.|..+.. +.+++.++|.++++|
T Consensus 78 ~~~~~~~~~k~~e~~~~G~pvi~~~~~-----~~~~~~~~-~~~~~~~~---------~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 78 SRFNEGFPNKLLEAMAAGKPVIASDNG-----AEGIVEED-GCGVLVAN---------DPEELAEAIERLLND 135 (135)
T ss_dssp BSS-SCC-HHHHHHHCTT--EEEEHHH-----CHCHS----SEEEE-TT----------HHHHHHHHHHHHH-
T ss_pred eeCCCcCcHHHHHHHHhCCCEEECCcc-----hhhheeec-CCeEEECC---------CHHHHHHHHHHHhcC
Confidence 432 2 37999999999999998651 12223233 77777632 899999999998864
No 114
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.84 E-value=0.034 Score=55.61 Aligned_cols=133 Identities=15% Similarity=0.174 Sum_probs=93.7
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCC-CccchhHHHHh-----cCCCeEEecCCCHH---HHh
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAE-SELGDGFEERV-----KGRGLVVRDWVNQK---EIL 260 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~~~pq~---~ll 260 (395)
+++.+||+||+......++.+..-.+-|+..+-.++|..+++. .+....+++.. ....+++.+-.|.. +-+
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~ 506 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARY 506 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhh
Confidence 4678999999999999999999988889999999999888742 22222333322 24567777777644 455
Q ss_pred cccCccceee---cCCchhHHHHHhcCCcEEeccCCCchhH--HHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 261 WHESVQGFLS---HCGWNSALESICAGVPILAWPIMADQPL--NARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 261 ~~~~~~~~It---hgG~~s~~Ea~~~GvP~i~~P~~~DQ~~--na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
.-+|+ |.. -||+.|..|++..|||+|.++ ++||. |+.-++..+|+-..+-. -..+=|..+|+
T Consensus 507 ~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA~--------s~~dYV~~av~ 573 (620)
T COG3914 507 GIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVAD--------SRADYVEKAVA 573 (620)
T ss_pred chhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhcC--------CHHHHHHHHHH
Confidence 56777 664 699999999999999999886 88875 55555444466554432 13344666664
No 115
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.82 E-value=0.08 Score=51.60 Aligned_cols=126 Identities=13% Similarity=0.076 Sum_probs=72.8
Q ss_pred CeeEEEeccccc-CCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHH---HhcccCccce
Q 048238 193 SVMYVAFGSQAE-ISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKE---ILWHESVQGF 268 (395)
Q Consensus 193 ~vv~vs~Gs~~~-~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~---ll~~~~~~~~ 268 (395)
+.+++.+|++.. .+.+.+.+++. ...+..|+++-+.. .. .........+|+.+.+++|..+ +++++++.++
T Consensus 205 ~~~i~y~G~l~~~~d~~ll~~la~--~~p~~~~vliG~~~-~~--~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~ 279 (373)
T cd04950 205 RPVIGYYGAIAEWLDLELLEALAK--ARPDWSFVLIGPVD-VS--IDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAIL 279 (373)
T ss_pred CCEEEEEeccccccCHHHHHHHHH--HCCCCEEEEECCCc-Cc--cChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEec
Confidence 345666788864 33344444443 23456666554321 00 1111112347999999998544 7888888332
Q ss_pred e------ecCCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 269 L------SHCGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 269 I------thgG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
- +.++. +-+.|++++|+|+|+.++ ...+ +. +.|..+.. -+.+++.++|.+++.++
T Consensus 280 P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~-~~~~~~~~--------~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 280 PFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RY-EDEVVLIA--------DDPEEFVAAIEKALLED 341 (373)
T ss_pred CCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hh-cCcEEEeC--------CCHHHHHHHHHHHHhcC
Confidence 1 12232 358999999999998763 1222 33 22333332 17999999999977544
No 116
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.77 E-value=0.041 Score=52.10 Aligned_cols=129 Identities=12% Similarity=0.050 Sum_probs=78.3
Q ss_pred eeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh--cCCCeEEecCCCHH---HHhcccCccce
Q 048238 194 VMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV--KGRGLVVRDWVNQK---EILWHESVQGF 268 (395)
Q Consensus 194 vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~---~ll~~~~~~~~ 268 (395)
.+.+..|.... .+....+++++++.+.++++.-............... ...++.+.+++++. .+++.+++.++
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ 249 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLF 249 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEe
Confidence 34455677743 2334556677777787876654432111111111111 25789999999865 47888888333
Q ss_pred ee--cCCc-hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 269 LS--HCGW-NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 269 It--hgG~-~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
-+ +-|+ .++.||+++|+|+|+.... .+...+ +.-..|+.++ . .+++.+++.+++..
T Consensus 250 ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~-------~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 250 PILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD-------S---VEELAAAVARADRL 308 (335)
T ss_pred CCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC-------C---HHHHHHHHHHHhcc
Confidence 23 2343 5899999999999988653 233344 3303677665 2 88999999888653
No 117
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.70 E-value=0.016 Score=55.63 Aligned_cols=96 Identities=17% Similarity=0.368 Sum_probs=69.2
Q ss_pred CCCeEEecCCCHHHH---hcccCccceeecC-------Cc------hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhc
Q 048238 245 GRGLVVRDWVNQKEI---LWHESVQGFLSHC-------GW------NSALESICAGVPILAWPIMADQPLNARMVTEEIK 308 (395)
Q Consensus 245 ~~~~~~~~~~pq~~l---l~~~~~~~~Ithg-------G~------~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg 308 (395)
.+|+.+.+|+|+.++ |+. +.+++...- .+ +-+.|.+++|+|+|+.+ +...+..|.+. +
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~~-~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVEN-G 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHhC-C
Confidence 468999999997764 444 443333221 11 12677899999999964 45677888777 9
Q ss_pred eEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Q 048238 309 VALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIAR 357 (395)
Q Consensus 309 ~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 357 (395)
+|+.++ +.+++.+++.++ .+++.+.|++|+++++++++
T Consensus 280 ~G~~v~----------~~~el~~~l~~~-~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 280 LGFVVD----------SLEELPEIIDNI-TEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred ceEEeC----------CHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHh
Confidence 999886 456888888875 34445689999999999997
No 118
>PHA01633 putative glycosyl transferase group 1
Probab=96.41 E-value=0.15 Score=48.87 Aligned_cols=84 Identities=10% Similarity=0.073 Sum_probs=56.0
Q ss_pred CCCeEEe---cCCCH---HHHhcccCccceeecC---Cc-hhHHHHHhcCCcEEeccC------CCch------hHHHHH
Q 048238 245 GRGLVVR---DWVNQ---KEILWHESVQGFLSHC---GW-NSALESICAGVPILAWPI------MADQ------PLNARM 302 (395)
Q Consensus 245 ~~~~~~~---~~~pq---~~ll~~~~~~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~------~~DQ------~~na~~ 302 (395)
..++.+. +++++ .++++.+++ ||.-+ |+ .+++||+++|+|+|+.-. .+|+ ..++..
T Consensus 200 ~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~ 277 (335)
T PHA01633 200 PANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEE 277 (335)
T ss_pred CCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHH
Confidence 4577776 45554 357889998 87643 43 578899999999998633 2332 223332
Q ss_pred Hh--hhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCC
Q 048238 303 VT--EEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGG 339 (395)
Q Consensus 303 v~--~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~ 339 (395)
.. +. |.|..++ ..++++++++|.+++..
T Consensus 278 ~~~~~~-g~g~~~~--------~~d~~~la~ai~~~~~~ 307 (335)
T PHA01633 278 YYDKEH-GQKWKIH--------KFQIEDMANAIILAFEL 307 (335)
T ss_pred hcCccc-Cceeeec--------CCCHHHHHHHHHHHHhc
Confidence 22 23 6666665 46999999999998643
No 119
>PRK14098 glycogen synthase; Provisional
Probab=96.21 E-value=0.16 Score=51.41 Aligned_cols=131 Identities=9% Similarity=0.052 Sum_probs=76.3
Q ss_pred CeeEEEecccccCC-HHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh--cCCCeEEecCCCHH---HHhcccCcc
Q 048238 193 SVMYVAFGSQAEIS-AQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV--KGRGLVVRDWVNQK---EILWHESVQ 266 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~---~ll~~~~~~ 266 (395)
..++...|...... .+.+.+.+..+...+.+++++ |.......+.+.+.. .+.++.+...++.. .+++.+|+
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lviv-G~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi- 384 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVIC-GSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM- 384 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEE-eCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCE-
Confidence 34555667665432 344444444444456666554 432111122333322 24578888888754 58899999
Q ss_pred ceeecCCc----hhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 267 GFLSHCGW----NSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 267 ~~IthgG~----~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
|+..+=. .+.+||+++|+|.|+....+ |...+ ...+. +.|+.++. .+.+.+.++|.+++
T Consensus 385 -~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~--~~~~~-~~G~l~~~--------~d~~~la~ai~~~l 449 (489)
T PRK14098 385 -LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEE--VSEDK-GSGFIFHD--------YTPEALVAKLGEAL 449 (489)
T ss_pred -EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeec--CCCCC-CceeEeCC--------CCHHHHHHHHHHHH
Confidence 7754321 47889999999888765432 22111 11123 67887763 47899999999876
No 120
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=96.11 E-value=0.12 Score=52.04 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=75.9
Q ss_pred CCeeEEEecccccCC-HHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhc--CCCeEEecCCCHH---HHhcccCc
Q 048238 192 SSVMYVAFGSQAEIS-AQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVK--GRGLVVRDWVNQK---EILWHESV 265 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~-~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~pq~---~ll~~~~~ 265 (395)
+..+++..|...... .+.+.+.+..+.+.+.+++++-... ......+.+... ..++.+....++. .+++.+++
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD-PEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC-HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 445566677775432 3445555555545556665554331 112222322222 4566654333332 47888888
Q ss_pred cceeecC---C-chhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 266 QGFLSHC---G-WNSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 266 ~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
++... | ..+.+||+++|+|+|+....+ |...+.....+. |.|+.++. .+.+++.+++.++++
T Consensus 374 --~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~-~~G~~~~~--------~~~~~l~~~i~~~l~ 441 (476)
T cd03791 374 --FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGE-GTGFVFEG--------YNADALLAALRRALA 441 (476)
T ss_pred --EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCC-CCeEEeCC--------CCHHHHHHHHHHHHH
Confidence 66431 2 247899999999999876532 221111111133 57888874 368999999999885
No 121
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.06 E-value=0.08 Score=53.43 Aligned_cols=123 Identities=15% Similarity=0.283 Sum_probs=81.9
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHH---H--hcCCCeEEecCCCHH-----HH
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEE---R--VKGRGLVVRDWVNQK-----EI 259 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~pq~-----~l 259 (395)
++..+||.+|--...++++.++.-++-|++.+..++|..+.+...- ..|.. . ..++.+.+.+-+... ..
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge-~rf~ty~~~~Gl~p~riifs~va~k~eHvrr~~ 834 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE-QRFRTYAEQLGLEPDRIIFSPVAAKEEHVRRGQ 834 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch-HHHHHHHHHhCCCccceeeccccchHHHHHhhh
Confidence 4567899999888889999999999999999999999998762110 12222 1 134556655544322 23
Q ss_pred hcccCccceeecCCchhHHHHHhcCCcEEeccCCCc-hhHHHHHHhhhhceEEEeec
Q 048238 260 LWHESVQGFLSHCGWNSALESICAGVPILAWPIMAD-QPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 260 l~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~D-Q~~na~~v~~~lg~g~~~~~ 315 (395)
|+.-.+..+.+. |+.|.++.++.|+|||.+|.-.- ...-+..+ -.+|+|-.+-+
T Consensus 835 LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll-~~~Gl~hliak 889 (966)
T KOG4626|consen 835 LADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLL-TALGLGHLIAK 889 (966)
T ss_pred hhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHH-HHcccHHHHhh
Confidence 443333445555 68899999999999999997432 22333344 33488886654
No 122
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.91 E-value=0.31 Score=49.65 Aligned_cols=64 Identities=19% Similarity=0.172 Sum_probs=47.3
Q ss_pred CCCeEEecCCCH-HHHhcccCccceeec---CC-chhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeec
Q 048238 245 GRGLVVRDWVNQ-KEILWHESVQGFLSH---CG-WNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 245 ~~~~~~~~~~pq-~~ll~~~~~~~~Ith---gG-~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~ 315 (395)
..++.+.+|..+ ..+|+.+++ ||.. -| -+++.||+++|+|+|+.... .+...+.+. ..|+.++.
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~dG-~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIEG-VSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHcccC-CcEEEECC
Confidence 467888888654 458999999 8753 34 46999999999999987543 345556555 78888874
No 123
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.61 E-value=0.3 Score=49.19 Aligned_cols=135 Identities=10% Similarity=0.031 Sum_probs=76.5
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh--cCCCeEEecCCCHH---HHhcccCc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV--KGRGLVVRDWVNQK---EILWHESV 265 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~pq~---~ll~~~~~ 265 (395)
...+++..|..... ..+.+.+.+..+.+.+.+++++ |.......+.+.+.. .+.++.+....+.. .+++.+|+
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 368 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADF 368 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE
Confidence 34556667777542 2344444445554456666655 432112222332221 23456655555543 48888998
Q ss_pred cceeecC---Cc-hhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 266 QGFLSHC---GW-NSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 266 ~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+|.-. |. .+++||+++|+|+|+....+ |...+...-... +.|+.+.. .+.+++.++|.+++.
T Consensus 369 --~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~-~~G~l~~~--------~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 --ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAES-GTGFLFEE--------YDPGALLAALSRALR 436 (473)
T ss_pred --EEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCC-CceEEeCC--------CCHHHHHHHHHHHHH
Confidence 77542 33 47889999999999875532 221111000122 67777763 478899999999886
No 124
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.49 E-value=0.61 Score=46.94 Aligned_cols=135 Identities=12% Similarity=0.117 Sum_probs=74.7
Q ss_pred CCeeEEEecccccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh--cCCCeE-EecCCCH--HHHhcccCc
Q 048238 192 SSVMYVAFGSQAEI-SAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV--KGRGLV-VRDWVNQ--KEILWHESV 265 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~-~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~pq--~~ll~~~~~ 265 (395)
+..+++..|..... ..+.+.+.+..+...+.+++++ |.......+.+.+.. .+.++. ..+|-.. ..+++.+|+
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 34566667777542 2344444333343346777666 432111222333222 234444 3455332 257899998
Q ss_pred cceeecC---Cc-hhHHHHHhcCCcEEeccCC--CchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 266 QGFLSHC---GW-NSALESICAGVPILAWPIM--ADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 266 ~~~Ithg---G~-~s~~Ea~~~GvP~i~~P~~--~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+|.-. |. .+.+||+++|+|.|+.... .|.-.+...-.+. +.|+.++. -+.+++.++|.+++.
T Consensus 360 --~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~-~~G~lv~~--------~d~~~la~~i~~~l~ 427 (466)
T PRK00654 360 --FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGE-ATGFVFDD--------FNAEDLLRALRRALE 427 (466)
T ss_pred --EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCC-CceEEeCC--------CCHHHHHHHHHHHHH
Confidence 77532 33 4889999999999986542 2221111111233 67887764 478999999999875
No 125
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.61 E-value=1.8 Score=41.06 Aligned_cols=154 Identities=12% Similarity=0.082 Sum_probs=81.6
Q ss_pred Cc-ccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEecccc---cCCHHHHHHHHH----HHHhCCC
Q 048238 151 PK-SWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAFGSQA---EISAQQLKEIAT----GLEQSKV 222 (395)
Q Consensus 151 ~~-~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~Gs~~---~~~~~~~~~l~~----~l~~~~~ 222 (395)
+| +...|+++.-.+. .+.+.-.+|.+.-...+++.+.|-.|+-. .++.+....++. ..+..+.
T Consensus 113 ~Nvl~t~ga~~~i~~~---------~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~ 183 (311)
T PF06258_consen 113 PNVLPTLGAPNRITPE---------RLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGG 183 (311)
T ss_pred CceEecccCCCcCCHH---------HHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCC
Confidence 44 4677888755432 12233333433211124666776666542 356664444443 3334555
Q ss_pred cEEEEEcCCCC-ccchhHHHHhc-CCCeEEecCC---CHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchh
Q 048238 223 NFLWVIRKAES-ELGDGFEERVK-GRGLVVRDWV---NQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQP 297 (395)
Q Consensus 223 ~~i~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~---pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~ 297 (395)
.+.+.+..... +.-..+.+..+ ...+.+.+-- |...+|+.++. .+||---.+++.||+..|+|+.++|+-.-..
T Consensus 184 ~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~ 262 (311)
T PF06258_consen 184 SLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSG 262 (311)
T ss_pred eEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcch
Confidence 55555544311 12222222222 2344332322 56788888886 4566666799999999999999999865111
Q ss_pred H---HHHHHhhhhceEEEeec
Q 048238 298 L---NARMVTEEIKVALRVET 315 (395)
Q Consensus 298 ~---na~~v~~~lg~g~~~~~ 315 (395)
. -.+.+.+. |.-..++.
T Consensus 263 r~~r~~~~L~~~-g~~r~~~~ 282 (311)
T PF06258_consen 263 RFRRFHQSLEER-GAVRPFTG 282 (311)
T ss_pred HHHHHHHHHHHC-CCEEECCC
Confidence 1 22344445 66665553
No 126
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=94.57 E-value=1.5 Score=43.54 Aligned_cols=160 Identities=11% Similarity=0.138 Sum_probs=89.8
Q ss_pred HHHHhhhccCCCCCeeEEEecccccC------C-H---HHHHHHHHHHHhCCCcEEEEEcCCC------C--ccchhHHH
Q 048238 180 WIRWLDRKLDEGSSVMYVAFGSQAEI------S-A---QQLKEIATGLEQSKVNFLWVIRKAE------S--ELGDGFEE 241 (395)
Q Consensus 180 l~~~l~~~~~~~~~vv~vs~Gs~~~~------~-~---~~~~~l~~~l~~~~~~~i~~~~~~~------~--~~~~~~~~ 241 (395)
+..|+... ..+++|-|+....... . . +.+.++++.|.+.|+++++...... . .....+.+
T Consensus 224 ~~~~~~~~--~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~ 301 (426)
T PRK10017 224 VQHWLDVA--AQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQ 301 (426)
T ss_pred hhhhhccc--ccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHH
Confidence 34565543 3467787776544311 1 1 3344555666567888876653210 0 01122333
Q ss_pred HhcC-CCeE-Ee-cCCCH--HHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEE-eec
Q 048238 242 RVKG-RGLV-VR-DWVNQ--KEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALR-VET 315 (395)
Q Consensus 242 ~~~~-~~~~-~~-~~~pq--~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~-~~~ 315 (395)
.... .+.. +. .+-+. ..+++++++ +|..==+ ++.-|+..|+|.+.++. |+-... .+ +.+|..-. ++.
T Consensus 302 ~~~~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~RlH-a~I~a~~~gvP~i~i~Y--~~K~~~-~~-~~lg~~~~~~~~ 374 (426)
T PRK10017 302 HVSDPARYHVVMDELNDLEMGKILGACEL--TVGTRLH-SAIISMNFGTPAIAINY--EHKSAG-IM-QQLGLPEMAIDI 374 (426)
T ss_pred hcccccceeEecCCCChHHHHHHHhhCCE--EEEecch-HHHHHHHcCCCEEEeee--hHHHHH-HH-HHcCCccEEech
Confidence 3332 2222 22 23343 368888887 7764322 56678899999999987 333222 23 33376644 554
Q ss_pred cCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHH
Q 048238 316 CDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIA 356 (395)
Q Consensus 316 ~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~ 356 (395)
.+++.++|.+.+.++++|.+ .++++.++--+..
T Consensus 375 ------~~l~~~~Li~~v~~~~~~r~--~~~~~l~~~v~~~ 407 (426)
T PRK10017 375 ------RHLLDGSLQAMVADTLGQLP--ALNARLAEAVSRE 407 (426)
T ss_pred ------hhCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHH
Confidence 67889999999999998865 4444444333333
No 127
>PLN02316 synthase/transferase
Probab=94.57 E-value=2 Score=47.10 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=60.9
Q ss_pred CCeEEecCCCHH---HHhcccCccceeecC---C-chhHHHHHhcCCcEEeccCC--CchhHH-------HHHHhhhhce
Q 048238 246 RGLVVRDWVNQK---EILWHESVQGFLSHC---G-WNSALESICAGVPILAWPIM--ADQPLN-------ARMVTEEIKV 309 (395)
Q Consensus 246 ~~~~~~~~~pq~---~ll~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~--~DQ~~n-------a~~v~~~lg~ 309 (395)
.++.+....+.. .+++.+|+ |+..+ | ..+.+||+++|+|.|+.... .|.... +...-.. +.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~-~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLE-PN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccC-Cc
Confidence 356555445543 58999998 88543 1 25899999999988876442 222211 1111012 46
Q ss_pred EEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhC
Q 048238 310 ALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEE 363 (395)
Q Consensus 310 g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~ 363 (395)
|+.++. .+++.|..+|.+++.. |......+++..++.+...
T Consensus 977 Gflf~~--------~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~d 1017 (1036)
T PLN02316 977 GFSFDG--------ADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQD 1017 (1036)
T ss_pred eEEeCC--------CCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhh
Confidence 877763 5888999999999864 2333334455555444444
No 128
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=94.47 E-value=0.52 Score=35.58 Aligned_cols=70 Identities=14% Similarity=0.152 Sum_probs=45.1
Q ss_pred cCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVK 350 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~ 350 (395)
+|-..-+.|++++|+|+|+-+. ......+ +. |.....- . +.+++.++|..+++|++ ..++.++
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~-------~--~~~el~~~i~~ll~~~~--~~~~ia~ 71 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITY-------N--DPEELAEKIEYLLENPE--ERRRIAK 71 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEE-------C--CHHHHHHHHHHHHCCHH--HHHHHHH
Confidence 4445688999999999999854 2222222 33 4222222 1 89999999999999884 4444444
Q ss_pred HHHHHHH
Q 048238 351 ELSEIAR 357 (395)
Q Consensus 351 ~l~~~~~ 357 (395)
+-.+.+.
T Consensus 72 ~a~~~v~ 78 (92)
T PF13524_consen 72 NARERVL 78 (92)
T ss_pred HHHHHHH
Confidence 4444443
No 129
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=93.54 E-value=0.65 Score=47.39 Aligned_cols=92 Identities=13% Similarity=0.142 Sum_probs=67.9
Q ss_pred CCeEEecCCC--H-HHHhcccCccceeecC---CchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCC
Q 048238 246 RGLVVRDWVN--Q-KEILWHESVQGFLSHC---GWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGS 319 (395)
Q Consensus 246 ~~~~~~~~~p--q-~~ll~~~~~~~~Ithg---G~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~ 319 (395)
..+.+.++.. + ..++.++.+ +|.-+ |.++.+||+++|+|+| .......|.+. .-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d~-~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEHN-KNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEcC-CCcEEeC-----
Confidence 4677888777 3 347888887 88755 7789999999999999 33344555555 6677664
Q ss_pred CcCccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHHHHHH
Q 048238 320 VRGFVKWQGLEKTVRELMGGEK-GEKARTKVKELSEIAR 357 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~~~~~ 357 (395)
+..+|.++|..+|.+.+ +..+...+-+.++...
T Consensus 474 -----d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 474 -----DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred -----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhh
Confidence 78899999999999884 6667666666666654
No 130
>PHA01630 putative group 1 glycosyl transferase
Probab=93.49 E-value=6.1 Score=37.86 Aligned_cols=39 Identities=5% Similarity=0.047 Sum_probs=28.4
Q ss_pred CCCHH---HHhcccCccceee--c-CC-chhHHHHHhcCCcEEeccCC
Q 048238 253 WVNQK---EILWHESVQGFLS--H-CG-WNSALESICAGVPILAWPIM 293 (395)
Q Consensus 253 ~~pq~---~ll~~~~~~~~It--h-gG-~~s~~Ea~~~GvP~i~~P~~ 293 (395)
++|.. .+++.+|+ |+. + .| ..++.||+++|+|+|+.-..
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~g 242 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKG 242 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCC
Confidence 36644 47889999 653 3 22 45899999999999997643
No 131
>PLN02939 transferase, transferring glycosyl groups
Probab=93.37 E-value=3.2 Score=45.07 Aligned_cols=83 Identities=11% Similarity=0.089 Sum_probs=54.6
Q ss_pred CCCeEEecCCCHH---HHhcccCccceeecC---C-chhHHHHHhcCCcEEeccCCC--chhHH--HHHH-hhhhceEEE
Q 048238 245 GRGLVVRDWVNQK---EILWHESVQGFLSHC---G-WNSALESICAGVPILAWPIMA--DQPLN--ARMV-TEEIKVALR 312 (395)
Q Consensus 245 ~~~~~~~~~~pq~---~ll~~~~~~~~Ithg---G-~~s~~Ea~~~GvP~i~~P~~~--DQ~~n--a~~v-~~~lg~g~~ 312 (395)
..++.+..+.+.. .+++.+|+ ||..+ | ..+.+||+++|+|.|+....+ |...+ ...+ .+. +.|+.
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg-~NGfL 912 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVEL-RNGFT 912 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCC-CceEE
Confidence 3568887887754 58999999 88642 2 247899999999999876532 22211 1111 112 56777
Q ss_pred eeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 313 VETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 313 ~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+.. .+++.+.++|.+++.
T Consensus 913 f~~--------~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 913 FLT--------PDEQGLNSALERAFN 930 (977)
T ss_pred ecC--------CCHHHHHHHHHHHHH
Confidence 653 478889988888764
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=92.75 E-value=4 Score=40.26 Aligned_cols=101 Identities=13% Similarity=0.043 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHhCCCc-EEEEEcCCCCccchhHHHHhcCCCeEEecCCC-H---HHHhcccCccceeecCC----chhHH
Q 048238 208 QQLKEIATGLEQSKVN-FLWVIRKAESELGDGFEERVKGRGLVVRDWVN-Q---KEILWHESVQGFLSHCG----WNSAL 278 (395)
Q Consensus 208 ~~~~~l~~~l~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q---~~ll~~~~~~~~IthgG----~~s~~ 278 (395)
..+..+++++...+.. -++.+|...... ..++...++.. + ..+++.+|+ ||.-+= -++++
T Consensus 256 Kg~~~li~A~~~l~~~~~L~ivG~g~~~~---------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vil 324 (405)
T PRK10125 256 KTDQQLVREMMALGDKIELHTFGKFSPFT---------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLILC 324 (405)
T ss_pred ccHHHHHHHHHhCCCCeEEEEEcCCCccc---------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHHH
Confidence 4456677888765433 245555421111 13555556653 2 446777888 776442 35899
Q ss_pred HHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 279 ESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 279 Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
||+++|+|+|+....+ ... +++. +.|+.++. -+.++|++++
T Consensus 325 EAmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~--------~d~~~La~~~ 365 (405)
T PRK10125 325 EALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSE--------EEVLQLAQLS 365 (405)
T ss_pred HHHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECC--------CCHHHHHhcc
Confidence 9999999999997754 122 3345 67888874 3677777643
No 133
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=92.37 E-value=0.62 Score=40.74 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=54.7
Q ss_pred Eeccccc-CCHHHHHHHHHHHHhC--CCcEEEEEcCCCCccchh-HHHHhcCCCeEEecCCC---HHH-HhcccCcccee
Q 048238 198 AFGSQAE-ISAQQLKEIATGLEQS--KVNFLWVIRKAESELGDG-FEERVKGRGLVVRDWVN---QKE-ILWHESVQGFL 269 (395)
Q Consensus 198 s~Gs~~~-~~~~~~~~l~~~l~~~--~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~p---q~~-ll~~~~~~~~I 269 (395)
.+|++.. ...+.+.+.+..+... +.++++.-+......... ........|+.+.++++ ... +++.+++ +|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di--~l 186 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADV--FV 186 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCE--EE
Confidence 5566543 2334444444445442 455555444321111000 11122356888888863 222 4555888 88
Q ss_pred ecCC----chhHHHHHhcCCcEEeccCCC
Q 048238 270 SHCG----WNSALESICAGVPILAWPIMA 294 (395)
Q Consensus 270 thgG----~~s~~Ea~~~GvP~i~~P~~~ 294 (395)
+... .+++.||+++|+|+|+.+..+
T Consensus 187 ~~~~~e~~~~~~~Eam~~g~pvi~s~~~~ 215 (229)
T cd01635 187 LPSLREGFGLVVLEAMACGLPVIATDVGG 215 (229)
T ss_pred ecccccCcChHHHHHHhCCCCEEEcCCCC
Confidence 8776 689999999999999988754
No 134
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=92.31 E-value=4.7 Score=40.27 Aligned_cols=187 Identities=12% Similarity=0.112 Sum_probs=104.9
Q ss_pred HhhccCcceeeeccccccchhhHHHhhhhcCCcccccCCCcccCCCCCCCCCCCCCCchHHHHHhhhccCCCCCeeEEEe
Q 048238 120 IVSTSNSYGMIVNSFYELEPLFADHCNRVVKPKSWCVGPLCLAELSPKNEEPKNELSKPAWIRWLDRKLDEGSSVMYVAF 199 (395)
Q Consensus 120 ~~~~~~~~~vlins~~~le~~~~~~~~~~~~~~~~~vGpl~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vv~vs~ 199 (395)
+....+.++++++|-..-+ .......+..+..++++|-+...+.. .+ ....+++++
T Consensus 234 l~~~~~~~~iIv~T~~q~~-di~~r~~~~~~~~~ip~g~i~~~~~~--------------------~r--~~~~~l~~t- 289 (438)
T TIGR02919 234 LDNETRNKKIIIPNKNEYE-KIKELLDNEYQEQISQLGYLYPFKKD--------------------NK--YRKQALILT- 289 (438)
T ss_pred hcCccccCeEEeCCHHHHH-HHHHHhCcccCceEEEEEEEEeeccc--------------------cC--CcccEEEEC-
Confidence 3334567788888843211 01111111223356777877432111 11 234566655
Q ss_pred cccccCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCccchhHHHHhcCCCeEE-ecCCC--HHHHhcccCccceeecCCc-
Q 048238 200 GSQAEISAQQLKEIATGLEQ-SKVNFLWVIRKAESELGDGFEERVKGRGLVV-RDWVN--QKEILWHESVQGFLSHCGW- 274 (395)
Q Consensus 200 Gs~~~~~~~~~~~l~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p--q~~ll~~~~~~~~IthgG~- 274 (395)
+...++.+....++ ++..|-+..+. +....+.+.....|++. .++.+ ..+++..+++-+-|+|+..
T Consensus 290 ------~s~~I~~i~~Lv~~lPd~~f~Iga~t---e~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~ 360 (438)
T TIGR02919 290 ------NSDQIEHLEEIVQALPDYHFHIAALT---EMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEI 360 (438)
T ss_pred ------CHHHHHHHHHHHHhCCCcEEEEEecC---cccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccH
Confidence 24455555555555 55666554443 12233322222366554 44566 3469999999888999874
Q ss_pred -hhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHH
Q 048238 275 -NSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELS 353 (395)
Q Consensus 275 -~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~ 353 (395)
.++.||+.+|+|++..=... .+...+.. |..+. .-+.+++.++|.++|.+++ .+++....-+
T Consensus 361 ~~al~eA~~~G~pI~afd~t~---~~~~~i~~----g~l~~--------~~~~~~m~~~i~~lL~d~~--~~~~~~~~q~ 423 (438)
T TIGR02919 361 LNAVRRAFEYNLLILGFEETA---HNRDFIAS----ENIFE--------HNEVDQLISKLKDLLNDPN--QFRELLEQQR 423 (438)
T ss_pred HHHHHHHHHcCCcEEEEeccc---CCcccccC----Cceec--------CCCHHHHHHHHHHHhcCHH--HHHHHHHHHH
Confidence 79999999999999874321 12222211 44443 3478999999999999874 4555544444
Q ss_pred HHH
Q 048238 354 EIA 356 (395)
Q Consensus 354 ~~~ 356 (395)
+.+
T Consensus 424 ~~a 426 (438)
T TIGR02919 424 EHA 426 (438)
T ss_pred HHh
Confidence 443
No 135
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.76 E-value=1.6 Score=40.50 Aligned_cols=96 Identities=15% Similarity=0.192 Sum_probs=61.3
Q ss_pred CCeeEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCC-eEEecCC---CHHHHhcccC
Q 048238 192 SSVMYVAFGSQA---EISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRG-LVVRDWV---NQKEILWHES 264 (395)
Q Consensus 192 ~~vv~vs~Gs~~---~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---pq~~ll~~~~ 264 (395)
++.|.+..|+.. ..+.+.+.++++.+...++++++..++.+.+....+.+.....+ +.+.+-. ....++++++
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~ 200 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD 200 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence 467777777763 35678999999999877888887655432222222322221122 2222222 2355889999
Q ss_pred ccceeecCCchhHHHHHhcCCcEEec
Q 048238 265 VQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 265 ~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
+ +|+.-. |.++=|.+.|+|++++
T Consensus 201 l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 201 L--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred E--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 9 999865 5666678999999866
No 136
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=88.61 E-value=7.2 Score=39.20 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=66.2
Q ss_pred ecCCCHHH---HhcccCccceee---cCCch-hHHHHHhcCCc----EEeccCCCchhHHHHHHhhhhceEEEeeccCCC
Q 048238 251 RDWVNQKE---ILWHESVQGFLS---HCGWN-SALESICAGVP----ILAWPIMADQPLNARMVTEEIKVALRVETCDGS 319 (395)
Q Consensus 251 ~~~~pq~~---ll~~~~~~~~It---hgG~~-s~~Ea~~~GvP----~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~ 319 (395)
.+.+++.+ +++.+|+ ++. +-|+| ++.|++++|+| +|+--+.+-. ..+ +-|+.++.
T Consensus 341 ~~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~----~~l----~~gllVnP---- 406 (456)
T TIGR02400 341 NRSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA----QEL----NGALLVNP---- 406 (456)
T ss_pred cCCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh----HHh----CCcEEECC----
Confidence 34556544 6788888 775 34764 77799999999 6666554321 212 34676764
Q ss_pred CcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHH
Q 048238 320 VRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDET 378 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~ 378 (395)
.+.+.++++|.++++.+. +..+++.+++.+.+.+ -+...-++.+++.|
T Consensus 407 ----~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~------~~~~~W~~~~l~~l 454 (456)
T TIGR02400 407 ----YDIDGMADAIARALTMPL-EEREERHRAMMDKLRK------NDVQRWREDFLSDL 454 (456)
T ss_pred ----CCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh------CCHHHHHHHHHHHh
Confidence 488999999999998542 1455555566665542 33555566666655
No 137
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=86.99 E-value=10 Score=33.46 Aligned_cols=147 Identities=11% Similarity=0.019 Sum_probs=78.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
+++++.|..|.++ ...++.|...+..+.++... ....+.+......+.......+..-+..+++ +|+
T Consensus 10 ~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs~~----~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl--Via 76 (202)
T PRK06718 10 NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVISPE----LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL--VIA 76 (202)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEcCC----CCHHHHHHHhCCCEEEEecCCChhhcCCceE--EEE
Confidence 5677777777775 34456666778777666432 3233333222234444444445566777887 888
Q ss_pred cCCchhHHHHHh----cCCcEEeccCCCchhHHH-----HHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 271 HCGWNSALESIC----AGVPILAWPIMADQPLNA-----RMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 271 hgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na-----~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
--+--.+.+.++ .++++-+ .|.+..+ ..+... ++-+.+..+ ..+..-...|++.|..++ .++
T Consensus 77 aT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~g-~l~iaIsT~---G~sP~la~~lr~~ie~~~-~~~ 147 (202)
T PRK06718 77 ATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHRG-KLTISVSTD---GASPKLAKKIRDELEALY-DES 147 (202)
T ss_pred cCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEcC-CeEEEEECC---CCChHHHHHHHHHHHHHc-chh
Confidence 777666555544 4554433 3433322 223222 455555531 011223344666666555 233
Q ss_pred hHHHHHHHHHHHHHHHHh
Q 048238 342 GEKARTKVKELSEIARKA 359 (395)
Q Consensus 342 ~~~~~~~a~~l~~~~~~~ 359 (395)
.+.+-+...++++.+++.
T Consensus 148 ~~~~~~~~~~~R~~~k~~ 165 (202)
T PRK06718 148 YESYIDFLYECRQKIKEL 165 (202)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 456777777888877754
No 138
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=86.58 E-value=29 Score=32.73 Aligned_cols=43 Identities=9% Similarity=0.067 Sum_probs=35.0
Q ss_pred hcHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEecc
Q 048238 13 LMQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 13 ~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~ 57 (395)
.....|.+++.++ +||+.|. -...-+..+|--+|+|.+.+.-.
T Consensus 71 eR~~~L~ki~~~~-kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ 113 (346)
T COG1817 71 ERVYKLSKIIAEF-KPDVAIG-KHSPELPRVAFGLGIPSIIFVDN 113 (346)
T ss_pred HHHHHHHHHHhhc-CCceEee-cCCcchhhHHhhcCCceEEecCC
Confidence 4456788888898 9999999 55667888999999999988543
No 139
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=84.58 E-value=7.8 Score=37.12 Aligned_cols=97 Identities=8% Similarity=0.130 Sum_probs=62.6
Q ss_pred CCCeeEEEeccccc---CCHHHHHHHHHHHHhCCCcEEEEEcCCCC--ccchhHHHHhcCCCeE-EecCCC---HHHHhc
Q 048238 191 GSSVMYVAFGSQAE---ISAQQLKEIATGLEQSKVNFLWVIRKAES--ELGDGFEERVKGRGLV-VRDWVN---QKEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~p---q~~ll~ 261 (395)
+++.|.+..|+... .+.+.+.++++.|...++++++..++.+. +....+.+.....+++ +.+-.. -..+++
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 45677777777532 56789999999998778887766543211 1222222222222222 233332 345899
Q ss_pred ccCccceeecCCchhHHHHHhcCCcEEec
Q 048238 262 HESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
++++ +|+. -.|.++=|.+.|+|.|.+
T Consensus 260 ~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 260 HARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred hCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 9998 9998 568889999999999976
No 140
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=84.01 E-value=4.5 Score=38.26 Aligned_cols=134 Identities=10% Similarity=0.026 Sum_probs=77.0
Q ss_pred CCCeeEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCccchhHHHHhcCCCeEEecCCC---HHHHhccc
Q 048238 191 GSSVMYVAFGSQA---EISAQQLKEIATGLEQSKVNFLWVIRKA-ESELGDGFEERVKGRGLVVRDWVN---QKEILWHE 263 (395)
Q Consensus 191 ~~~vv~vs~Gs~~---~~~~~~~~~l~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p---q~~ll~~~ 263 (395)
+++.|.+.-|+.. ..+.+.+.++++.|...++++++..|.+ +.+....+.+... +..+.+-.+ -..+++++
T Consensus 178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~--~~~l~g~~sL~el~ali~~a 255 (319)
T TIGR02193 178 PAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALP--GAVVLPKMSLAEVAALLAGA 255 (319)
T ss_pred CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCC--CCeecCCCCHHHHHHHHHcC
Confidence 4566666666542 2567899999999977778877665542 1112222322221 222333333 34588899
Q ss_pred CccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEE-EeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 264 SVQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVAL-RVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 264 ~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~-~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
++ +|+.- .|.++=|.+.|+|.|++ +... +..+. .-||-.. .+.. .+-...+++++.++++++|
T Consensus 256 ~l--~I~~D-Sgp~HlAaa~g~P~i~l-fg~t---~p~~~-~P~~~~~~~~~~---~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 256 DA--VVGVD-TGLTHLAAALDKPTVTL-YGAT---DPGRT-GGYGKPNVALLG---ESGANPTPDEVLAALEELL 319 (319)
T ss_pred CE--EEeCC-ChHHHHHHHcCCCEEEE-ECCC---CHhhc-ccCCCCceEEcc---CccCCCCHHHHHHHHHhhC
Confidence 98 99875 46777888999999975 2111 11111 0012111 1111 1125789999999998764
No 141
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=83.70 E-value=4.1 Score=36.89 Aligned_cols=95 Identities=8% Similarity=0.113 Sum_probs=54.4
Q ss_pred CCCeeEEEeccccc---CCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhc----CCCeEEecCCC---HHHHh
Q 048238 191 GSSVMYVAFGSQAE---ISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVK----GRGLVVRDWVN---QKEIL 260 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~---~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~p---q~~ll 260 (395)
+++.|.+..|+... ++.+.+.++++.|.+.++++++..++.+. .....+... ...+.+.+-.. ...++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQ--EKEIADQIAAGLQNPVINLAGKTSLRELAALI 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHH--HHHHHHHHHTTHTTTTEEETTTS-HHHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHH--HHHHHHHHHHhcccceEeecCCCCHHHHHHHH
Confidence 46778888887642 56789999999998888776655554210 111111111 12344434333 34588
Q ss_pred cccCccceeecCCchhHHHHHhcCCcEEec
Q 048238 261 WHESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
+++++ +|+.-. |.++=|.+.|+|+|++
T Consensus 182 ~~a~~--~I~~Dt-g~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADL--VIGNDT-GPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSE--EEEESS-HHHHHHHHTT--EEEE
T ss_pred hcCCE--EEecCC-hHHHHHHHHhCCEEEE
Confidence 89998 988754 6888899999999988
No 142
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=83.52 E-value=35 Score=31.09 Aligned_cols=131 Identities=19% Similarity=0.260 Sum_probs=72.8
Q ss_pred eeEEEeccccc-CCHHHHHHHHHHHHhCC--CcEEEEEcCCCC--ccchhHHHHhc-CCCeEEecCCC---HHHHhcccC
Q 048238 194 VMYVAFGSQAE-ISAQQLKEIATGLEQSK--VNFLWVIRKAES--ELGDGFEERVK-GRGLVVRDWVN---QKEILWHES 264 (395)
Q Consensus 194 vv~vs~Gs~~~-~~~~~~~~l~~~l~~~~--~~~i~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~p---q~~ll~~~~ 264 (395)
.+++..|.... ...+.+...+..+.... ..+++....... .+.. +..... ..++.+.++++ ...+++.++
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~ 278 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEK-LAKKLGLEDNVKFLGYVPDEELAELLASAD 278 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHH-HHHHhCCCCcEEEecccCHHHHHHHHHhCC
Confidence 56666777544 33444444445444433 344333332211 1111 222222 36778888888 334677777
Q ss_pred ccceeec---CCch-hHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 265 VQGFLSH---CGWN-SALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 265 ~~~~Ith---gG~~-s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
+ ++.. .|.+ ++.|++++|+|+|..... .....+.+. +.|. +.. ..+.+.+.+++..++++.
T Consensus 279 ~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~~-~~g~-~~~-------~~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 279 V--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVEDG-ETGL-LVP-------PGDVEELADALEQLLEDP 343 (381)
T ss_pred E--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcCC-CceE-ecC-------CCCHHHHHHHHHHHhcCH
Confidence 7 6655 3554 359999999999776543 222223122 2466 332 226899999999998776
No 143
>PRK14099 glycogen synthase; Provisional
Probab=83.31 E-value=35 Score=34.61 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=67.3
Q ss_pred eEEEecccccC-CHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh--cCCCe-EEecCCCHHH-Hh-cccCccce
Q 048238 195 MYVAFGSQAEI-SAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV--KGRGL-VVRDWVNQKE-IL-WHESVQGF 268 (395)
Q Consensus 195 v~vs~Gs~~~~-~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~pq~~-ll-~~~~~~~~ 268 (395)
++...|..... ..+.+.+.+..+.+.+.+++++-++. ..+.+.+.+.. .+.++ .+.+|-.... ++ +.+|+ |
T Consensus 297 li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~-~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~aDi--f 373 (485)
T PRK14099 297 LLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGD-AELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGADA--L 373 (485)
T ss_pred EEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCC-HHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcCCE--E
Confidence 33345665432 22333333333334456665554331 11222333221 12344 4567744332 34 56788 7
Q ss_pred eec---CCc-hhHHHHHhcCCcEEeccCC--CchhHHHHH---HhhhhceEEEeeccCCCCcCccCHHHHHHHHHH---H
Q 048238 269 LSH---CGW-NSALESICAGVPILAWPIM--ADQPLNARM---VTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE---L 336 (395)
Q Consensus 269 Ith---gG~-~s~~Ea~~~GvP~i~~P~~--~DQ~~na~~---v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~---~ 336 (395)
+.- =|. .+.+||+++|+|.|+.... .|...+... .+.. +.|+.++. .+.+++.++|.+ +
T Consensus 374 v~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~-~~G~l~~~--------~d~~~La~ai~~a~~l 444 (485)
T PRK14099 374 LVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGV-ATGVQFSP--------VTADALAAALRKTAAL 444 (485)
T ss_pred EECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCC-CceEEeCC--------CCHHHHHHHHHHHHHH
Confidence 753 232 4778999999766665432 132211110 0111 46877764 478999999987 5
Q ss_pred hCCC
Q 048238 337 MGGE 340 (395)
Q Consensus 337 l~~~ 340 (395)
++|+
T Consensus 445 ~~d~ 448 (485)
T PRK14099 445 FADP 448 (485)
T ss_pred hcCH
Confidence 5565
No 144
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=82.41 E-value=8 Score=41.79 Aligned_cols=98 Identities=14% Similarity=0.190 Sum_probs=62.8
Q ss_pred HHhcccCccceeec---CCch-hHHHHHhcCCc---EEecc-CCCchhHHHHHHhhhhc-eEEEeeccCCCCcCccCHHH
Q 048238 258 EILWHESVQGFLSH---CGWN-SALESICAGVP---ILAWP-IMADQPLNARMVTEEIK-VALRVETCDGSVRGFVKWQG 328 (395)
Q Consensus 258 ~ll~~~~~~~~Ith---gG~~-s~~Ea~~~GvP---~i~~P-~~~DQ~~na~~v~~~lg-~g~~~~~~~~~~~~~~~~~~ 328 (395)
.+++.+++ |+.- -|+| .+.|++++|+| ++++. +.+ .+.. +| .|+.++. .+.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G----~~~~----l~~~allVnP--------~D~~~ 432 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAG----AGQS----LGAGALLVNP--------WNITE 432 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCcC----chhh----hcCCeEEECC--------CCHHH
Confidence 57888888 7754 4886 66699999999 34443 332 1111 24 5777764 58999
Q ss_pred HHHHHHHHhC-CChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 329 LEKTVRELMG-GEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 329 l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
++++|.++|+ +++ ..+++.+++.+.++. -+...-.+.+++.+...
T Consensus 433 lA~AI~~aL~m~~~--er~~r~~~~~~~v~~------~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 433 VSSAIKEALNMSDE--ERETRHRHNFQYVKT------HSAQKWADDFMSELNDI 478 (797)
T ss_pred HHHHHHHHHhCCHH--HHHHHHHHHHHhhhh------CCHHHHHHHHHHHHHHH
Confidence 9999999998 432 444555555555542 23445566677766654
No 145
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.31 E-value=4.2 Score=37.99 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=51.5
Q ss_pred cCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEEeccCCCchhH--HHHHHhhhhceEEEeeccCCCCcCccCHHHH
Q 048238 252 DWVNQKEILWHESVQGFLSHCGWNSALESICAGVPILAWPIMADQPL--NARMVTEEIKVALRVETCDGSVRGFVKWQGL 329 (395)
Q Consensus 252 ~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~--na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l 329 (395)
.|-...++|.++++ .|--.| ..+-.++=.|||+|.+|-.+-|+. .|.+-.+.||+.+.+.. ...+.
T Consensus 301 sqqsfadiLH~ada--algmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~---------~~aq~ 368 (412)
T COG4370 301 SQQSFADILHAADA--ALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR---------PEAQA 368 (412)
T ss_pred eHHHHHHHHHHHHH--HHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC---------Cchhh
Confidence 34444567777776 554443 233445678999999999998865 67777777899988875 23333
Q ss_pred HHHH-HHHhCCCh
Q 048238 330 EKTV-RELMGGEK 341 (395)
Q Consensus 330 ~~~i-~~~l~~~~ 341 (395)
+..+ .+++.|++
T Consensus 369 a~~~~q~ll~dp~ 381 (412)
T COG4370 369 AAQAVQELLGDPQ 381 (412)
T ss_pred HHHHHHHHhcChH
Confidence 3333 34888883
No 146
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=82.19 E-value=1.5 Score=33.78 Aligned_cols=53 Identities=17% Similarity=0.305 Sum_probs=43.7
Q ss_pred chHHHHHhhhccCCCCCeeEEEecccccC---CH--HHHHHHHHHHHhCCCcEEEEEcCC
Q 048238 177 KPAWIRWLDRKLDEGSSVMYVAFGSQAEI---SA--QQLKEIATGLEQSKVNFLWVIRKA 231 (395)
Q Consensus 177 ~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~---~~--~~~~~l~~~l~~~~~~~i~~~~~~ 231 (395)
...+..|+... +.++.|.|++||.... .. ..+..+++++...|..+|..++..
T Consensus 27 ~~~~P~Wl~~~--~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 27 PAVVPDWLLEP--PGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp SEEEEGGGSSS--TSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCCcccccC--CCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 34566788887 8899999999999653 22 578899999999999999999875
No 147
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=82.05 E-value=17 Score=32.16 Aligned_cols=150 Identities=15% Similarity=0.113 Sum_probs=78.2
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
+++++.|..|.++ ..-+..|...|..+.++... ..+++.+.....++....--.+...+..+++ +|.
T Consensus 9 gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~----~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l--Vi~ 75 (205)
T TIGR01470 9 GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEE----LESELTLLAEQGGITWLARCFDADILEGAFL--VIA 75 (205)
T ss_pred CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCC----CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE--EEE
Confidence 4667777666665 23345666778887766543 2233333222335544332334556777777 888
Q ss_pred cCCchhHHH-----HHhcCCcEEec--cCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhH
Q 048238 271 HCGWNSALE-----SICAGVPILAW--PIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGE 343 (395)
Q Consensus 271 hgG~~s~~E-----a~~~GvP~i~~--P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~ 343 (395)
.-|-..+.+ |-..|+|+-++ |-..|= ..-..+ ++=++-+.+... ..+..-...|++.|.+++... .+
T Consensus 76 at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~f-~~pa~~-~~g~l~iaisT~---G~sP~la~~lr~~ie~~l~~~-~~ 149 (205)
T TIGR01470 76 ATDDEELNRRVAHAARARGVPVNVVDDPELCSF-IFPSIV-DRSPVVVAISSG---GAAPVLARLLRERIETLLPPS-LG 149 (205)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEECCCcccCeE-EEeeEE-EcCCEEEEEECC---CCCcHHHHHHHHHHHHhcchh-HH
Confidence 888764433 34568887433 322221 122223 331344555531 012233355777777766432 23
Q ss_pred HHHHHHHHHHHHHHHh
Q 048238 344 KARTKVKELSEIARKA 359 (395)
Q Consensus 344 ~~~~~a~~l~~~~~~~ 359 (395)
.+-+...++++.+++.
T Consensus 150 ~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 150 DLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 5666667777776643
No 148
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=80.57 E-value=33 Score=32.41 Aligned_cols=131 Identities=14% Similarity=0.169 Sum_probs=79.9
Q ss_pred eeEEEecccccCCHHHHHHHHHHHHhCC--CcEEEEEcCCCCccchhHHH-------HhcC-CCeE-EecCCC---HHHH
Q 048238 194 VMYVAFGSQAEISAQQLKEIATGLEQSK--VNFLWVIRKAESELGDGFEE-------RVKG-RGLV-VRDWVN---QKEI 259 (395)
Q Consensus 194 vv~vs~Gs~~~~~~~~~~~l~~~l~~~~--~~~i~~~~~~~~~~~~~~~~-------~~~~-~~~~-~~~~~p---q~~l 259 (395)
.+-|-.|-.+..++.++..+-..-+..+ .++++-.+-+. -...+.+ +.-+ .++. ...++| ..++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~--gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~l 223 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPA--NNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLAL 223 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCC--CCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHH
Confidence 3455567666555555544332223344 45555554421 1112211 1223 4554 356676 4569
Q ss_pred hcccCccceeec--CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 260 LWHESVQGFLSH--CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 260 l~~~~~~~~Ith--gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
|+.+|++.|+++ =|.|+++-.+..|+|+++- -+-+++.... +. |+-+..+. +.++...+.++=+++.
T Consensus 224 L~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~-e~-gv~Vlf~~------d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 224 LRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLT-EQ-GLPVLFTG------DDLDEDIVREAQRQLA 292 (322)
T ss_pred HHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHH-hC-CCeEEecC------CcccHHHHHHHHHHHH
Confidence 999999888886 4889999999999999987 4445555533 56 77776665 6788888877755543
No 149
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=80.46 E-value=12 Score=36.02 Aligned_cols=97 Identities=6% Similarity=0.107 Sum_probs=62.3
Q ss_pred CCCeeEEEecccc---cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCcc--chhHHHHhcCCC-eEEecCCC---HHHHhc
Q 048238 191 GSSVMYVAFGSQA---EISAQQLKEIATGLEQSKVNFLWVIRKAESEL--GDGFEERVKGRG-LVVRDWVN---QKEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~---~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~p---q~~ll~ 261 (395)
+++.|.+.-|+.. .++.+.+.++++.|.+.++++++..++.+.+. ...+.+.....+ +...+-.. -..+++
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 3577878877763 26778999999999877888877666532221 122222111222 22333333 345899
Q ss_pred ccCccceeecCCchhHHHHHhcCCcEEec
Q 048238 262 HESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
++++ ||+.-. |-++=|.+.|+|.|++
T Consensus 262 ~a~l--~v~nDS-Gp~HlAaA~g~P~v~l 287 (352)
T PRK10422 262 HAQL--FIGVDS-APAHIAAAVNTPLICL 287 (352)
T ss_pred hCCE--EEecCC-HHHHHHHHcCCCEEEE
Confidence 9998 999854 6778888999999865
No 150
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=80.32 E-value=57 Score=31.35 Aligned_cols=133 Identities=10% Similarity=0.159 Sum_probs=85.0
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHH---hCCCcEEEEEcCCCCccchhHHH-------Hh-cCCCeEE-ecCCCH---
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLE---QSKVNFLWVIRKAESELGDGFEE-------RV-KGRGLVV-RDWVNQ--- 256 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~---~~~~~~i~~~~~~~~~~~~~~~~-------~~-~~~~~~~-~~~~pq--- 256 (395)
+..+.|-.|-.+..++.++..+- ++. ..+.++++-.+-+. -...+.+ +. ...++.+ .+++|-
T Consensus 183 ~~~ltILvGNSgd~sNnHieaL~-~L~~~~~~~~kIivPLsYg~--~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eY 259 (360)
T PF07429_consen 183 KGKLTILVGNSGDPSNNHIEALE-ALKQQFGDDVKIIVPLSYGA--NNQAYIQQVIQAGKELFGAENFQILTEFMPFDEY 259 (360)
T ss_pred CCceEEEEcCCCCCCccHHHHHH-HHHHhcCCCeEEEEECCCCC--chHHHHHHHHHHHHHhcCccceeEhhhhCCHHHH
Confidence 34566666777665555544432 222 23456666554421 1112221 11 2346654 568884
Q ss_pred HHHhcccCccceeec--CCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 257 KEILWHESVQGFLSH--CGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 257 ~~ll~~~~~~~~Ith--gG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
.++|+.++++.|++. =|.|+++-.+..|+|+++- -+-+++-... +. |+-+.... +.++...|+++=+
T Consensus 260 l~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~~l~-~~-~ipVlf~~------d~L~~~~v~ea~r 328 (360)
T PF07429_consen 260 LALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQDLK-EQ-GIPVLFYG------DELDEALVREAQR 328 (360)
T ss_pred HHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHHHHH-hC-CCeEEecc------ccCCHHHHHHHHH
Confidence 458999999777765 5889999999999999986 4555544443 66 87777664 7899999999988
Q ss_pred HHhC
Q 048238 335 ELMG 338 (395)
Q Consensus 335 ~~l~ 338 (395)
++..
T Consensus 329 ql~~ 332 (360)
T PF07429_consen 329 QLAN 332 (360)
T ss_pred HHhh
Confidence 8764
No 151
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=80.02 E-value=12 Score=37.62 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=48.2
Q ss_pred EecCCCHHH---HhcccCccceee---cCCch-hHHHHHhcCCc----EEeccCCCchhHHHHHHhhhhceEEEeeccCC
Q 048238 250 VRDWVNQKE---ILWHESVQGFLS---HCGWN-SALESICAGVP----ILAWPIMADQPLNARMVTEEIKVALRVETCDG 318 (395)
Q Consensus 250 ~~~~~pq~~---ll~~~~~~~~It---hgG~~-s~~Ea~~~GvP----~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~ 318 (395)
+.+++++.+ +++.+|+ ||. +-|+| ++.||+++|+| +|+--..+--.. . .-|+.++.
T Consensus 345 ~~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~-------~-~~g~lv~p--- 411 (460)
T cd03788 345 LYRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE-------L-SGALLVNP--- 411 (460)
T ss_pred EeCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh-------c-CCCEEECC---
Confidence 346667554 6888888 664 34654 67899999999 554433221110 1 34666653
Q ss_pred CCcCccCHHHHHHHHHHHhCCC
Q 048238 319 SVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 319 ~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
.+.++++++|.++++++
T Consensus 412 -----~d~~~la~ai~~~l~~~ 428 (460)
T cd03788 412 -----YDIDEVADAIHRALTMP 428 (460)
T ss_pred -----CCHHHHHHHHHHHHcCC
Confidence 47899999999999865
No 152
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=79.42 E-value=5.7 Score=33.83 Aligned_cols=44 Identities=11% Similarity=0.191 Sum_probs=30.4
Q ss_pred HhcHHHHHHHHhcCCCccEEEECCchhhHH--H-HH--HHc-CCCcEEEec
Q 048238 12 KLMQPHFERALESLPHVSFMVSDGFLWWTL--D-SA--NKF-GFPRFVFYG 56 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~--~-~A--~~l-gIP~i~~~~ 56 (395)
..+.+.+.++|++. +||+||+...+.... . +- ..+ ++|.+.+.+
T Consensus 75 ~~~~~~l~~~l~~~-~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvT 124 (169)
T PF06925_consen 75 RLFARRLIRLLREF-QPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVT 124 (169)
T ss_pred HHHHHHHHHHHhhc-CCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEc
Confidence 45577899999998 999999998775333 1 11 223 477776655
No 153
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=78.87 E-value=13 Score=35.34 Aligned_cols=96 Identities=9% Similarity=0.104 Sum_probs=60.8
Q ss_pred CCCeeEEEeccc-c---cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeE-EecCCC---HHHHhcc
Q 048238 191 GSSVMYVAFGSQ-A---EISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLV-VRDWVN---QKEILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~-~---~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p---q~~ll~~ 262 (395)
+++.|.+.-|+. . .++.+.+.++++.+...+.++++.-++.+.+....+.+.. +.+++ +.+-.. -..++++
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~-~~~~~~l~g~~sL~el~ali~~ 251 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALL-PGELRNLAGETSLDEAVDLIAL 251 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhC-CcccccCCCCCCHHHHHHHHHh
Confidence 467888887774 2 2567899999999877777776654432222222232221 22222 223222 3458999
Q ss_pred cCccceeecCCchhHHHHHhcCCcEEec
Q 048238 263 ESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 263 ~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
+++ +|+.- .|-++=|.+.|+|.|.+
T Consensus 252 a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 252 AKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred CCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 998 99875 46778888999999865
No 154
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=78.53 E-value=65 Score=30.98 Aligned_cols=61 Identities=8% Similarity=0.002 Sum_probs=44.6
Q ss_pred hhHHHHHHHhcHHHHHHHHhcCCCccEEEECCchhhHHHHH-HHcCCCcEEEecchHHHHHHHH
Q 048238 4 YVPFTRATKLMQPHFERALESLPHVSFMVSDGFLWWTLDSA-NKFGFPRFVFYGMNNYVMCVSS 66 (395)
Q Consensus 4 ~~~~~~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A-~~lgIP~i~~~~~~~~~~~~~~ 66 (395)
|.++.+|+..|--.++++++= .||+-|-..-.++...+- +..++|++.+...+..++.+..
T Consensus 129 fTllgQaigsmIl~~Eai~r~--~Pdi~IDtMGY~fs~p~~r~l~~~~V~aYvHYP~iS~DML~ 190 (465)
T KOG1387|consen 129 FTLLGQAIGSMILAFEAIIRF--PPDIFIDTMGYPFSYPIFRRLRRIPVVAYVHYPTISTDMLK 190 (465)
T ss_pred eehHHHHHHHHHHHHHHHHhC--CchheEecCCCcchhHHHHHHccCceEEEEecccccHHHHH
Confidence 567778887787778777764 699999777666666544 5789999999877766554444
No 155
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=78.26 E-value=22 Score=32.76 Aligned_cols=77 Identities=14% Similarity=0.173 Sum_probs=47.6
Q ss_pred HHHHHHhC-CCcEEEEEcCCCC-ccchhHH-HHhcCCC-eEEecCCCHHHHhcccCccceeecCCchhHHHHHhcCCcEE
Q 048238 213 IATGLEQS-KVNFLWVIRKAES-ELGDGFE-ERVKGRG-LVVRDWVNQKEILWHESVQGFLSHCGWNSALESICAGVPIL 288 (395)
Q Consensus 213 l~~~l~~~-~~~~i~~~~~~~~-~~~~~~~-~~~~~~~-~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~i 288 (395)
+....+.. +..++++.-+.+. ....++. +.....+ +.+..-++-.+++.+++. +||-.+ +.-.||+.+|+|++
T Consensus 146 l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi 222 (269)
T PF05159_consen 146 LESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVI 222 (269)
T ss_pred HHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceE
Confidence 33344433 6777777654211 1111222 2222333 444566788899999998 888765 47789999999999
Q ss_pred eccC
Q 048238 289 AWPI 292 (395)
Q Consensus 289 ~~P~ 292 (395)
++..
T Consensus 223 ~~G~ 226 (269)
T PF05159_consen 223 VFGR 226 (269)
T ss_pred EecC
Confidence 9743
No 156
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=75.67 E-value=16 Score=35.11 Aligned_cols=97 Identities=8% Similarity=0.026 Sum_probs=61.5
Q ss_pred CCCeeEEEecccc----cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCC---C-eEEecCCC---HHHH
Q 048238 191 GSSVMYVAFGSQA----EISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGR---G-LVVRDWVN---QKEI 259 (395)
Q Consensus 191 ~~~vv~vs~Gs~~----~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~p---q~~l 259 (395)
+++.|.+.-|+.. .++.+.+.++++.|...+.++++.-++.+.+....+.+..... + +.+.+-.+ -..+
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sL~el~al 258 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLEQAVIL 258 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCCCHHHHHHH
Confidence 4678888888742 2668899999998877778876654433222222222221111 1 22223333 3458
Q ss_pred hcccCccceeecCCchhHHHHHhcCCcEEec
Q 048238 260 LWHESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 260 l~~~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
++++++ ||+-- .|-++=|.+.|+|+|.+
T Consensus 259 i~~a~l--~I~nD-TGp~HlAaA~g~P~val 286 (348)
T PRK10916 259 IAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHhCCE--EEecC-ChHHHHHHHhCCCEEEE
Confidence 899998 98874 47788899999999865
No 157
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=74.10 E-value=19 Score=37.08 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=47.6
Q ss_pred HHHHhcccCccceee---cCCc-hhHHHHHhcCCcEEeccCCC-chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHH
Q 048238 256 QKEILWHESVQGFLS---HCGW-NSALESICAGVPILAWPIMA-DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLE 330 (395)
Q Consensus 256 q~~ll~~~~~~~~It---hgG~-~s~~Ea~~~GvP~i~~P~~~-DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~ 330 (395)
..+++..+++ +|. +=|+ .+++||+++|+|+|.....+ ....+ ..+...-..|+.+...+ ...-.-+.++|+
T Consensus 468 y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~-~~~~~e~v~~La 543 (590)
T cd03793 468 YEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRR-FKSPDESVQQLT 543 (590)
T ss_pred hHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCC-ccchHHHHHHHH
Confidence 5567888888 665 3454 48999999999999987632 22222 12211101566665210 001123567788
Q ss_pred HHHHHHhCCC
Q 048238 331 KTVRELMGGE 340 (395)
Q Consensus 331 ~~i~~~l~~~ 340 (395)
+++.+++..+
T Consensus 544 ~~m~~~~~~~ 553 (590)
T cd03793 544 QYMYEFCQLS 553 (590)
T ss_pred HHHHHHhCCc
Confidence 8888888543
No 158
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=73.63 E-value=11 Score=35.85 Aligned_cols=136 Identities=10% Similarity=-0.005 Sum_probs=75.0
Q ss_pred CCeeEEEecc-cc--cCCHHHHHHHHHHHHhCCCcEEEEEcCC-CCccchhHHHHhcCCCeEEecCCC---HHHHhcccC
Q 048238 192 SSVMYVAFGS-QA--EISAQQLKEIATGLEQSKVNFLWVIRKA-ESELGDGFEERVKGRGLVVRDWVN---QKEILWHES 264 (395)
Q Consensus 192 ~~vv~vs~Gs-~~--~~~~~~~~~l~~~l~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p---q~~ll~~~~ 264 (395)
++.|.+..|+ .. .++.+.+.++++.+.+.+.++++..|.. +.+....+.+. ..++.+.+-.. -..++++++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~~~~~~i~~~--~~~~~l~g~~sL~elaali~~a~ 255 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEEQRAKRLAEG--FPYVEVLPKLSLEQVARVLAGAK 255 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHcc--CCcceecCCCCHHHHHHHHHhCC
Confidence 4555444444 32 3678899999999977788876654542 11122222111 12233333332 345899999
Q ss_pred ccceeecCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhce-EEEeeccCCCCcCccCHHHHHHHHHHHhC
Q 048238 265 VQGFLSHCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKV-ALRVETCDGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 265 ~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~-g~~~~~~~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+ +|+-.. |.++=|.+.|+|.|++=-..+.....-. |- ...+..+ ..+-.+++++++.++++++|+
T Consensus 256 l--~I~nDS-Gp~HlA~A~g~p~valfGpt~p~~~~p~-----~~~~~~~~~~-~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 256 A--VVSVDT-GLSHLTAALDRPNITLYGPTDPGLIGGY-----GKNQHACRSP-GKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred E--EEecCC-cHHHHHHHhCCCEEEEECCCCcccccCC-----CCCceeecCC-CcccccCCHHHHHHHHHHHhh
Confidence 8 998754 6888899999999865111111111100 10 0111110 011246899999999988763
No 159
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=72.31 E-value=1.2e+02 Score=30.89 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=68.1
Q ss_pred eEEecCCCHHH---HhcccCccceee--cCCchhHH-HHHhcCC----cEEeccCCCchhHHHHHHhhhhceEEEeeccC
Q 048238 248 LVVRDWVNQKE---ILWHESVQGFLS--HCGWNSAL-ESICAGV----PILAWPIMADQPLNARMVTEEIKVALRVETCD 317 (395)
Q Consensus 248 ~~~~~~~pq~~---ll~~~~~~~~It--hgG~~s~~-Ea~~~Gv----P~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~ 317 (395)
+.+.+.+|..+ +++.+|+ ++|| .-|+|-+. |.++++. |+|+--+.+ |. +.+.-|+.+++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVNP-- 432 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTNP-- 432 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEECC--
Confidence 45567778655 6667887 2333 45898665 9999987 555554432 21 22355777764
Q ss_pred CCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHH
Q 048238 318 GSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCK 380 (395)
Q Consensus 318 ~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 380 (395)
.+.++++++|.+.|+.+.. .-+++.+++.+.++. -+...=.+.+++.|..
T Consensus 433 ------~d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~~------~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 433 ------YDPVRMDETIYVALAMPKA-EQQARMREMFDAVNY------YDVQRWADEFLAAVSP 482 (487)
T ss_pred ------CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh------CCHHHHHHHHHHHhhh
Confidence 5899999999999987632 345555555555542 2344456667766654
No 160
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=71.01 E-value=5.2 Score=38.75 Aligned_cols=129 Identities=9% Similarity=0.164 Sum_probs=69.3
Q ss_pred HHHHHHHHHhCCCcEEEEEcCCCCccchhHHH-HhcCCCeEEe-cCCCHHHHhcccCccceeecCCchhHHHHHhcCCcE
Q 048238 210 LKEIATGLEQSKVNFLWVIRKAESELGDGFEE-RVKGRGLVVR-DWVNQKEILWHESVQGFLSHCGWNSALESICAGVPI 287 (395)
Q Consensus 210 ~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~~GvP~ 287 (395)
...+. .+...++.+++..-+. ....... .....++... ...+..++|..+|+ +||=-. +.+.|.+..++|+
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~---~~~~~~~~~~~~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~KPi 291 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPN---MKKKFKDFKEDNSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNKPI 291 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHH---HHTT----TT-TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--E
T ss_pred HHHHH-HHhCCCcEEEEEeCch---hhhchhhhhccCCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCCCE
Confidence 34444 5555666666554331 1011111 1123455543 34467889999999 999874 5788999999999
Q ss_pred EeccCCCchhHHHHH----HhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHH
Q 048238 288 LAWPIMADQPLNARM----VTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARK 358 (395)
Q Consensus 288 i~~P~~~DQ~~na~~----v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~ 358 (395)
|....-.|.+.+.+- ..+. ..|..+ -+.++|.++|..++++++ .++++.++..+.+-.
T Consensus 292 ify~~D~~~Y~~~rg~~~~~~~~-~pg~~~----------~~~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~ 353 (369)
T PF04464_consen 292 IFYQPDLEEYEKERGFYFDYEED-LPGPIV----------YNFEELIEAIENIIENPD--EYKEKREKFRDKFFK 353 (369)
T ss_dssp EEE-TTTTTTTTTSSBSS-TTTS-SSS-EE----------SSHHHHHHHHTTHHHHHH--HTHHHHHHHHHHHST
T ss_pred EEEeccHHHHhhccCCCCchHhh-CCCcee----------CCHHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCC
Confidence 987765555422210 1011 223222 377899999999886553 566666677776643
No 161
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=70.04 E-value=1.1e+02 Score=29.57 Aligned_cols=144 Identities=13% Similarity=0.219 Sum_probs=83.4
Q ss_pred CCCCeeEEEecccccCCHHHHHHHHHHHHhC---------CC-cEE-EEEcCCCCccchhHHHHhcCCC---eE-EecCC
Q 048238 190 EGSSVMYVAFGSQAEISAQQLKEIATGLEQS---------KV-NFL-WVIRKAESELGDGFEERVKGRG---LV-VRDWV 254 (395)
Q Consensus 190 ~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~---------~~-~~i-~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 254 (395)
.+++.++|| |.+..+.+.+..+++|+..- +. ..+ +++|+. .+-+.+...+...| +. ...|.
T Consensus 252 ~~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG--PlkE~Y~~~I~~~~~~~v~~~tpWL 327 (444)
T KOG2941|consen 252 PERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG--PLKEKYSQEIHEKNLQHVQVCTPWL 327 (444)
T ss_pred cCCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC--chhHHHHHHHHHhcccceeeeeccc
Confidence 356788886 44444567777788887721 11 233 444542 34444554444333 22 34676
Q ss_pred C---HHHHhcccCccceeecCCch-----hHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCH
Q 048238 255 N---QKEILWHESVQGFLSHCGWN-----SALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKW 326 (395)
Q Consensus 255 p---q~~ll~~~~~~~~IthgG~~-----s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~ 326 (395)
. ...+|+.+|+|...|-...| -+..-.=+|+|++.+-+- ---..|.+. --|+... +.
T Consensus 328 ~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELVkh~-eNGlvF~----------Ds 392 (444)
T KOG2941|consen 328 EAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELVKHG-ENGLVFE----------DS 392 (444)
T ss_pred ccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHHhcC-CCceEec----------cH
Confidence 4 55699999998877765544 355566688888877442 122334344 4566665 67
Q ss_pred HHHHHHHHHHhCC----Ch-hHHHHHHHHHH
Q 048238 327 QGLEKTVRELMGG----EK-GEKARTKVKEL 352 (395)
Q Consensus 327 ~~l~~~i~~~l~~----~~-~~~~~~~a~~l 352 (395)
+++++.+.-+++| .+ -.++++|+++-
T Consensus 393 ~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~ 423 (444)
T KOG2941|consen 393 EELAEQLQMLFKNFPDNADELNQLKKNLREE 423 (444)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH
Confidence 7888888777762 22 23455555444
No 162
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=68.57 E-value=59 Score=32.85 Aligned_cols=55 Identities=18% Similarity=0.247 Sum_probs=37.5
Q ss_pred hHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh
Q 048238 276 SALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK 341 (395)
Q Consensus 276 s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~ 341 (395)
++.||+++|.|++..=- ---+.-|++. -.|..+++ +.-....+++++.++..|++
T Consensus 381 v~IEAMa~glPvvAt~~----GGP~EiV~~~-~tG~l~dp------~~e~~~~~a~~~~kl~~~p~ 435 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATNN----GGPAEIVVHG-VTGLLIDP------GQEAVAELADALLKLRRDPE 435 (495)
T ss_pred eeHHHHhcCCCEEEecC----CCceEEEEcC-CcceeeCC------chHHHHHHHHHHHHHhcCHH
Confidence 78999999999998732 2223334333 56777764 22233479999999999985
No 163
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=67.85 E-value=7.2 Score=31.58 Aligned_cols=33 Identities=9% Similarity=0.062 Sum_probs=27.6
Q ss_pred CccEEEECCchhhHHHHHHHcCCCcEEEecchH
Q 048238 27 HVSFMVSDGFLWWTLDSANKFGFPRFVFYGMNN 59 (395)
Q Consensus 27 kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~~~~ 59 (395)
..|+++++.....+..+|+++|||++.....+.
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~ 132 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW 132 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence 588888899888899999999999999877654
No 164
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=66.96 E-value=19 Score=34.40 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCeeEEEec-ccc---cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeE-EecCCC---HHHHhccc
Q 048238 192 SSVMYVAFG-SQA---EISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLV-VRDWVN---QKEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~G-s~~---~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p---q~~ll~~~ 263 (395)
++.|.+.-| |.. ..+.+.+.++++.+.+.+.++++..++.+.+....+.... .+.. +.+-.+ -..+++++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~--~~~~~l~~k~sL~e~~~li~~a 252 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGL--PNAVILAGKTSLEELAALIAGA 252 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhc--CCccccCCCCCHHHHHHHHhcC
Confidence 688999988 442 3678999999999999886665555442111222222211 1211 334333 34478888
Q ss_pred CccceeecCCchhHHHHHhcCCcEEec
Q 048238 264 SVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 264 ~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
++ ||+-- .|-++=|.+.|+|.|.+
T Consensus 253 ~l--~I~~D-Sg~~HlAaA~~~P~I~i 276 (334)
T COG0859 253 DL--VIGND-SGPMHLAAALGTPTIAL 276 (334)
T ss_pred CE--EEccC-ChHHHHHHHcCCCEEEE
Confidence 88 88764 46777888999999965
No 165
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=66.82 E-value=38 Score=31.77 Aligned_cols=96 Identities=16% Similarity=0.215 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHh----c
Q 048238 208 QQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESIC----A 283 (395)
Q Consensus 208 ~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~----~ 283 (395)
+.+..+.+.|++.++.+++..... .... ..+. ...+..++-..+++ +|+-||=||+++++. .
T Consensus 21 e~~~~i~~~L~~~g~~v~v~~~~~-~~~~--------~~~~---~~~~~~~~~~~~d~--vi~~GGDGt~l~~~~~~~~~ 86 (291)
T PRK02155 21 EPLESLAAFLAKRGFEVVFEADTA-RNIG--------LTGY---PALTPEEIGARADL--AVVLGGDGTMLGIGRQLAPY 86 (291)
T ss_pred HHHHHHHHHHHHCCCEEEEecchh-hhcC--------cccc---cccChhHhccCCCE--EEEECCcHHHHHHHHHhcCC
Confidence 445667777777777766543210 0000 0000 00122333345677 999999999999977 3
Q ss_pred CCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 284 GVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 284 GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
++|++.+-.. .+|... +++.+++.+++.++++++
T Consensus 87 ~~pilGIn~G--------------~lGFL~---------~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 87 GVPLIGINHG--------------RLGFIT---------DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred CCCEEEEcCC--------------Cccccc---------cCCHHHHHHHHHHHHcCC
Confidence 6788887321 234322 357788888888887654
No 166
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=66.74 E-value=70 Score=34.27 Aligned_cols=112 Identities=17% Similarity=0.136 Sum_probs=64.0
Q ss_pred EEecCCCHHH---HhcccCccceeec---CCch-hHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCc
Q 048238 249 VVRDWVNQKE---ILWHESVQGFLSH---CGWN-SALESICAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVR 321 (395)
Q Consensus 249 ~~~~~~pq~~---ll~~~~~~~~Ith---gG~~-s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~ 321 (395)
.+.+++++.+ +++.+++ |+.- -|+| .+.|++++|+|-...|...+----+..+ .-|+.++.
T Consensus 345 ~~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~P------ 412 (726)
T PRK14501 345 YFYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVNP------ 412 (726)
T ss_pred EEeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEECC------
Confidence 3556777654 7778888 6653 3654 7789999977521112111111111111 23677764
Q ss_pred CccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 322 GFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 322 ~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
.+.++++++|.++++.+.. ..+++.+++.+.++ . -+...-++.+++.+...
T Consensus 413 --~d~~~la~ai~~~l~~~~~-e~~~r~~~~~~~v~-----~-~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 413 --NDIEGIAAAIKRALEMPEE-EQRERMQAMQERLR-----R-YDVHKWASDFLDELREA 463 (726)
T ss_pred --CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHH-----h-CCHHHHHHHHHHHHHHH
Confidence 4799999999999986421 33344444444432 2 34556666777766664
No 167
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=64.48 E-value=37 Score=28.72 Aligned_cols=101 Identities=13% Similarity=0.122 Sum_probs=53.7
Q ss_pred CchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecC-C
Q 048238 176 SKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDW-V 254 (395)
Q Consensus 176 ~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 254 (395)
.-.++-++|.+. ....++.|..+ ......++..+.+-.++=+++.... ....+ ..-....++ .
T Consensus 19 ~A~~lg~~La~~-----g~~lv~Gg~~G-----lM~a~a~ga~~~gg~viGVlp~~l~-~~~~~-----~~~~i~~~~~~ 82 (159)
T TIGR00725 19 IAYRLGKELAKK-----GHILINGGRTG-----VMEAVSKGAREAGGLVVGILPDEDF-AGNPY-----LTIKVKTGMNF 82 (159)
T ss_pred HHHHHHHHHHHC-----CCEEEcCCchh-----HHHHHHHHHHHCCCeEEEECChhhc-cCCCC-----ceEEEECCCcc
Confidence 345566677654 45666644444 2344555555555555444432100 00000 011223344 4
Q ss_pred CHHHHhcccCccceeecCCchhHHH---HHhcCCcEEeccC
Q 048238 255 NQKEILWHESVQGFLSHCGWNSALE---SICAGVPILAWPI 292 (395)
Q Consensus 255 pq~~ll~~~~~~~~IthgG~~s~~E---a~~~GvP~i~~P~ 292 (395)
+...++...+-..++--||.||+.| ++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 5566555444445666788888765 4779999998875
No 168
>PRK10637 cysG siroheme synthase; Provisional
Probab=62.89 E-value=45 Score=33.49 Aligned_cols=147 Identities=12% Similarity=0.045 Sum_probs=76.7
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
+++++.|..|..+. .=++.|...+..+.++... +.+++.+.....++....--.+...+..+.+ +|.
T Consensus 12 ~~~vlvvGgG~vA~-------rk~~~ll~~ga~v~visp~----~~~~~~~l~~~~~i~~~~~~~~~~dl~~~~l--v~~ 78 (457)
T PRK10637 12 DRDCLLVGGGDVAE-------RKARLLLDAGARLTVNALA----FIPQFTAWADAGMLTLVEGPFDESLLDTCWL--AIA 78 (457)
T ss_pred CCEEEEECCCHHHH-------HHHHHHHHCCCEEEEEcCC----CCHHHHHHHhCCCEEEEeCCCChHHhCCCEE--EEE
Confidence 57788887777753 1234555678887776543 4444544333445444333334555666666 777
Q ss_pred cCCchhHHHHHh-----cCCcEEeccCCCchhHHHH-----HHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 271 HCGWNSALESIC-----AGVPILAWPIMADQPLNAR-----MVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 271 hgG~~s~~Ea~~-----~GvP~i~~P~~~DQ~~na~-----~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
--+-..+.+.++ .|+++-+ .|++..+. .+... ++-+.+..+ -.+..-...|++.|.+++. +
T Consensus 79 at~d~~~n~~i~~~a~~~~~lvN~----~d~~~~~~f~~pa~~~~g-~l~iaisT~---G~sP~~a~~lr~~ie~~~~-~ 149 (457)
T PRK10637 79 ATDDDAVNQRVSEAAEARRIFCNV----VDAPKAASFIMPSIIDRS-PLMVAVSSG---GTSPVLARLLREKLESLLP-Q 149 (457)
T ss_pred CCCCHHHhHHHHHHHHHcCcEEEE----CCCcccCeEEEeeEEecC-CEEEEEECC---CCCcHHHHHHHHHHHHhcc-h
Confidence 666555554433 4555433 34433332 23222 355555541 0112333456777776663 3
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 048238 341 KGEKARTKVKELSEIARKA 359 (395)
Q Consensus 341 ~~~~~~~~a~~l~~~~~~~ 359 (395)
+.+.+-+...++++.+++.
T Consensus 150 ~~~~~~~~~~~~R~~~k~~ 168 (457)
T PRK10637 150 HLGQVAKYAGQLRGRVKQQ 168 (457)
T ss_pred hHHHHHHHHHHHHHHHHHh
Confidence 3345666666666666643
No 169
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=62.61 E-value=56 Score=29.35 Aligned_cols=145 Identities=11% Similarity=-0.000 Sum_probs=77.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
+++++.|..|.++. .=+..|...+..+.++... +.+++.+.....++....--.+..-|..+.+ +|.
T Consensus 25 ~~~VLVVGGG~VA~-------RK~~~Ll~~gA~VtVVap~----i~~el~~l~~~~~i~~~~r~~~~~dl~g~~L--Via 91 (223)
T PRK05562 25 KIKVLIIGGGKAAF-------IKGKTFLKKGCYVYILSKK----FSKEFLDLKKYGNLKLIKGNYDKEFIKDKHL--IVI 91 (223)
T ss_pred CCEEEEECCCHHHH-------HHHHHHHhCCCEEEEEcCC----CCHHHHHHHhCCCEEEEeCCCChHHhCCCcE--EEE
Confidence 46677776666652 2234555678888777654 4344444333344443332224445566666 888
Q ss_pred cCCchhHHHHHh-----cCCcEEeccCCCchhHHH-----HHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 271 HCGWNSALESIC-----AGVPILAWPIMADQPLNA-----RMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 271 hgG~~s~~Ea~~-----~GvP~i~~P~~~DQ~~na-----~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
.-+-..+.+.++ .|+++.+. |++..+ ..+ ++-++-+.+... ..+..-...|++.|.+++.
T Consensus 92 ATdD~~vN~~I~~~a~~~~~lvn~v----d~p~~~dFi~PAiv-~rg~l~IaIST~---G~sP~lar~lR~~ie~~l~-- 161 (223)
T PRK05562 92 ATDDEKLNNKIRKHCDRLYKLYIDC----SDYKKGLCIIPYQR-STKNFVFALNTK---GGSPKTSVFIGEKVKNFLK-- 161 (223)
T ss_pred CCCCHHHHHHHHHHHHHcCCeEEEc----CCcccCeEEeeeEE-ecCCEEEEEECC---CcCcHHHHHHHHHHHHHHH--
Confidence 777666655443 36665543 333222 223 331344555431 0122334567888888883
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 048238 341 KGEKARTKVKELSEIARK 358 (395)
Q Consensus 341 ~~~~~~~~a~~l~~~~~~ 358 (395)
+.+.+-+.+.++++.+++
T Consensus 162 ~~~~l~~~l~~~R~~vk~ 179 (223)
T PRK05562 162 KYDDFIEYVTKIRNKAKK 179 (223)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 233677777777777664
No 170
>PLN02929 NADH kinase
Probab=62.23 E-value=42 Score=31.68 Aligned_cols=97 Identities=12% Similarity=0.164 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHh---c
Q 048238 207 AQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESIC---A 283 (395)
Q Consensus 207 ~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~---~ 283 (395)
.+.+..+.+.|++.+..+..+.+. ++ ......+++ +|+-||=||++.+.. .
T Consensus 33 ~~~~~~~~~~L~~~gi~~~~v~r~----------------~~--------~~~~~~~Dl--vi~lGGDGT~L~aa~~~~~ 86 (301)
T PLN02929 33 KDTVNFCKDILQQKSVDWECVLRN----------------EL--------SQPIRDVDL--VVAVGGDGTLLQASHFLDD 86 (301)
T ss_pred HHHHHHHHHHHHHcCCEEEEeecc----------------cc--------ccccCCCCE--EEEECCcHHHHHHHHHcCC
Confidence 455666777777777765322221 00 112245577 999999999998855 4
Q ss_pred CCcEEeccCCC------chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 284 GVPILAWPIMA------DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 284 GvP~i~~P~~~------DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
++|++.+=... .+++|.-.. .+ ..|.... .+.+++.+++.++++++
T Consensus 87 ~iPvlGIN~Gp~~~~~~~~~~~~~~~-~r-~lGfL~~---------~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 87 SIPVLGVNSDPTQKDEVEEYSDEFDA-RR-STGHLCA---------ATAEDFEQVLDDVLFGR 138 (301)
T ss_pred CCcEEEEECCCccccccccccccccc-cc-Ccccccc---------CCHHHHHHHHHHHHcCC
Confidence 78998875431 123333211 12 3554433 46889999999999764
No 171
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=62.04 E-value=44 Score=31.33 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=40.4
Q ss_pred HHhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
++...+++ +|+-||=||++.++. .++|++.+-.. .+|.. .+++.+++.+++
T Consensus 60 ~~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL---------t~~~~~~~~~~l 114 (287)
T PRK14077 60 ELFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL---------TDITVDEAEKFF 114 (287)
T ss_pred hcccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC---------CcCCHHHHHHHH
Confidence 33445777 999999999997765 47898888321 23332 245778888888
Q ss_pred HHHhCCC
Q 048238 334 RELMGGE 340 (395)
Q Consensus 334 ~~~l~~~ 340 (395)
.++++++
T Consensus 115 ~~i~~g~ 121 (287)
T PRK14077 115 QAFFQGE 121 (287)
T ss_pred HHHHcCC
Confidence 8888654
No 172
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=61.88 E-value=40 Score=28.90 Aligned_cols=104 Identities=17% Similarity=0.275 Sum_probs=66.2
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchh-HHHHhcCCCeEEecCCCHHHHhcccCcccee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDG-FEERVKGRGLVVRDWVNQKEILWHESVQGFL 269 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I 269 (395)
.+.+..+.+|.++ +++++.++..|.+++..-... .+.. +. ..++ .+.+..++++.+|+ ++
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~---~~~~~~~----~~~~---~~~~l~ell~~aDi--v~ 96 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSP---KPEEGAD----EFGV---EYVSLDELLAQADI--VS 96 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSC---HHHHHHH----HTTE---EESSHHHHHHH-SE--EE
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccC---Chhhhcc----cccc---eeeehhhhcchhhh--hh
Confidence 4678888999988 567777777899876665542 1111 11 1222 55678899999999 88
Q ss_pred ecCCchhHHHHHhcCCcEEeccCC--CchhHHHHHHhhhhceE-EEeeccCCCCcCccCHHHHHHHHHH
Q 048238 270 SHCGWNSALESICAGVPILAWPIM--ADQPLNARMVTEEIKVA-LRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 270 thgG~~s~~Ea~~~GvP~i~~P~~--~DQ~~na~~v~~~lg~g-~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
.|+ |.. ..+..|+..+... +-| +.++. .|.+-++.+.|.+++++
T Consensus 97 ~~~------------------plt~~T~~li~~~~l~~m-k~ga~lvN~---aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 97 LHL------------------PLTPETRGLINAEFLAKM-KPGAVLVNV---ARGELVDEDALLDALES 143 (178)
T ss_dssp E-S------------------SSSTTTTTSBSHHHHHTS-TTTEEEEES---SSGGGB-HHHHHHHHHT
T ss_pred hhh------------------ccccccceeeeeeeeecc-ccceEEEec---cchhhhhhhHHHHHHhh
Confidence 887 654 3566788887554 644 55555 55677888888888764
No 173
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=59.69 E-value=2e+02 Score=29.07 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=54.5
Q ss_pred EecCCCHHH---HhcccCccceee--cCCchhH-HHHHhcCCc---EEeccCCCchhHHHHHHhhhhc-eEEEeeccCCC
Q 048238 250 VRDWVNQKE---ILWHESVQGFLS--HCGWNSA-LESICAGVP---ILAWPIMADQPLNARMVTEEIK-VALRVETCDGS 319 (395)
Q Consensus 250 ~~~~~pq~~---ll~~~~~~~~It--hgG~~s~-~Ea~~~GvP---~i~~P~~~DQ~~na~~v~~~lg-~g~~~~~~~~~ 319 (395)
+.+-+++.+ ++..+|+ ++|| ..|+|.+ .|-+++-.+ ++++ -++--|. +.|+ .++.+++
T Consensus 357 ~~~~~~~~~~~aly~~aDv-~lvTslrDGmNLva~Eyva~q~~~~GvLiL----SefaGaa---~~L~~~al~VNP---- 424 (474)
T PF00982_consen 357 IYRSLSFEELLALYRAADV-ALVTSLRDGMNLVAKEYVACQDDNPGVLIL----SEFAGAA---EQLSEAALLVNP---- 424 (474)
T ss_dssp E-S---HHHHHHHHHH-SE-EEE--SSBS--HHHHHHHHHS-TS--EEEE----ETTBGGG---GT-TTS-EEE-T----
T ss_pred EecCCCHHHHHHHHHhhhh-EEecchhhccCCcceEEEEEecCCCCceEe----eccCCHH---HHcCCccEEECC----
Confidence 334455443 6667777 3343 6899865 488877665 2222 2233332 3346 5577774
Q ss_pred CcCccCHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHH
Q 048238 320 VRGFVKWQGLEKTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETC 379 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~ 379 (395)
.+.++++++|.+.|+=+. +.-+++.+++.+.+.+ -+...=++.+++.|.
T Consensus 425 ----~d~~~~A~ai~~AL~M~~-~Er~~r~~~~~~~v~~------~~~~~W~~~~l~~L~ 473 (474)
T PF00982_consen 425 ----WDIEEVADAIHEALTMPP-EERKERHARLREYVRE------HDVQWWAESFLRDLK 473 (474)
T ss_dssp ----T-HHHHHHHHHHHHT--H-HHHHHHHHHHHHHHHH------T-HHHHHHHHHHHHH
T ss_pred ----CChHHHHHHHHHHHcCCH-HHHHHHHHHHHHHhHh------CCHHHHHHHHHHHhh
Confidence 689999999999997331 1455555566665542 235555667776654
No 174
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=58.80 E-value=83 Score=29.10 Aligned_cols=97 Identities=13% Similarity=0.193 Sum_probs=56.6
Q ss_pred CCeeEEE-eccccc--CCHHHH----HHHHHHHHhCCCcEEEEEcCCCCc-cchhHHHHhcC-CCeEE----ecCCCHHH
Q 048238 192 SSVMYVA-FGSQAE--ISAQQL----KEIATGLEQSKVNFLWVIRKAESE-LGDGFEERVKG-RGLVV----RDWVNQKE 258 (395)
Q Consensus 192 ~~vv~vs-~Gs~~~--~~~~~~----~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~-~~~~~----~~~~pq~~ 258 (395)
++.|-|- .|+... ..++.. ..+.+.+++.|..|++.......+ ...-+..+... .+++- .++=|..+
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~ 240 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYID 240 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHH
Confidence 4444444 444432 334433 335567777899999888764221 11111111211 22221 24558889
Q ss_pred HhcccCcccee-ecCCchhHHHHHhcCCcEEec
Q 048238 259 ILWHESVQGFL-SHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 259 ll~~~~~~~~I-thgG~~s~~Ea~~~GvP~i~~ 290 (395)
+|+.++. +| |--..|...||.+.|+|+-+.
T Consensus 241 ~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 241 MLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred HHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 9999887 55 455568889999999997654
No 175
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=57.28 E-value=17 Score=33.35 Aligned_cols=42 Identities=10% Similarity=0.052 Sum_probs=32.0
Q ss_pred HHHHHHHHhcCCCccEEEE-----CCchh-hHHHHHHHcCCCcEEEecc
Q 048238 15 QPHFERALESLPHVSFMVS-----DGFLW-WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~-----D~~~~-~~~~~A~~lgIP~i~~~~~ 57 (395)
..-|.+.+++. .||+||+ |.... -+..+|+.||+|++.+...
T Consensus 101 A~~La~ai~~~-~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~ 148 (256)
T PRK03359 101 ASALAAAAQKA-GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSK 148 (256)
T ss_pred HHHHHHHHHHh-CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEEE
Confidence 44566777777 8999998 44333 6777999999999988664
No 176
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=56.02 E-value=1.2e+02 Score=25.38 Aligned_cols=141 Identities=13% Similarity=0.142 Sum_probs=65.5
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecC
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHC 272 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~Ithg 272 (395)
|.|-|-+||.. +....++....|+..+..+-..+-+. ...|+.+.+.. +-+.+...+.||+=.
T Consensus 1 p~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~sa-HR~p~~l~~~~--------------~~~~~~~~~viIa~A 63 (150)
T PF00731_consen 1 PKVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASA-HRTPERLLEFV--------------KEYEARGADVIIAVA 63 (150)
T ss_dssp -EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--T-TTSHHHHHHHH--------------HHTTTTTESEEEEEE
T ss_pred CeEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEec-cCCHHHHHHHH--------------HHhccCCCEEEEEEC
Confidence 34666777775 56778888888888887664444332 12333222110 011111122388887
Q ss_pred CchhHHHHH---hcCCcEEeccCCCchhHHHH---HHhhhh-ceEEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHH
Q 048238 273 GWNSALESI---CAGVPILAWPIMADQPLNAR---MVTEEI-KVALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKA 345 (395)
Q Consensus 273 G~~s~~Ea~---~~GvP~i~~P~~~DQ~~na~---~v~~~l-g~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~ 345 (395)
|...-+-++ ..-.|+|.+|....+..... .+.... |+++..-.- ++..+...++-.|-. +.|+ .+
T Consensus 64 G~~a~Lpgvva~~t~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i----~~~~nAA~~A~~ILa-~~d~---~l 135 (150)
T PF00731_consen 64 GMSAALPGVVASLTTLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGI----NNGFNAALLAARILA-LKDP---EL 135 (150)
T ss_dssp ESS--HHHHHHHHSSS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SS----THHHHHHHHHHHHHH-TT-H---HH
T ss_pred CCcccchhhheeccCCCEEEeecCcccccCcccHHHHHhccCCCCceEEEc----cCchHHHHHHHHHHh-cCCH---HH
Confidence 765333332 23789999998765432221 122222 555544320 122334444443322 2455 67
Q ss_pred HHHHHHHHHHHHH
Q 048238 346 RTKVKELSEIARK 358 (395)
Q Consensus 346 ~~~a~~l~~~~~~ 358 (395)
+++.+..++..++
T Consensus 136 ~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 136 REKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 7777777776653
No 177
>PRK06487 glycerate dehydrogenase; Provisional
Probab=55.38 E-value=48 Score=31.49 Aligned_cols=100 Identities=21% Similarity=0.209 Sum_probs=58.4
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+..|.+|.++ +++++.++..|.+++..-... .+ . ...++...++|+.+|+ ++.
T Consensus 148 gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~~---~~---------~---~~~~~~l~ell~~sDi--v~l 203 (317)
T PRK06487 148 GKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLPG---RP---------A---RPDRLPLDELLPQVDA--LTL 203 (317)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCC---Cc---------c---cccccCHHHHHHhCCE--EEE
Confidence 4788999999998 456666666788875432210 00 0 1135577889999999 888
Q ss_pred cCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhce-EEEeeccCCCCcCccCHHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKV-ALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~-g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
|+-.+.- ..+..|+..+... +- ++.++. +|.+-++.+.|.++++
T Consensus 204 ~lPlt~~----------------T~~li~~~~~~~m-k~ga~lIN~---aRG~vVde~AL~~AL~ 248 (317)
T PRK06487 204 HCPLTEH----------------TRHLIGARELALM-KPGALLINT---ARGGLVDEQALADALR 248 (317)
T ss_pred CCCCChH----------------HhcCcCHHHHhcC-CCCeEEEEC---CCccccCHHHHHHHHH
Confidence 8733211 2334456555333 33 233343 3445566666666654
No 178
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=55.21 E-value=23 Score=32.72 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=38.8
Q ss_pred ccCccceeecCCchhHHHHHh------cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 262 HESVQGFLSHCGWNSALESIC------AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~------~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
.+++ +|+-||=||++.++. .++|++.+-.. .+|.. .++..+++.+.+.+
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL---------~~~~~~~~~~~l~~ 89 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFY---------TDWRPFEVDKLVIA 89 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceec---------ccCCHHHHHHHHHH
Confidence 4566 999999999999976 48899988321 23332 23567778888888
Q ss_pred HhCCC
Q 048238 336 LMGGE 340 (395)
Q Consensus 336 ~l~~~ 340 (395)
+++++
T Consensus 90 i~~g~ 94 (265)
T PRK04885 90 LAKDP 94 (265)
T ss_pred HHcCC
Confidence 88754
No 179
>PRK12342 hypothetical protein; Provisional
Probab=54.73 E-value=21 Score=32.84 Aligned_cols=42 Identities=10% Similarity=0.093 Sum_probs=31.6
Q ss_pred HHHHHHHHhcCCCccEEEECC-----chh-hHHHHHHHcCCCcEEEecc
Q 048238 15 QPHFERALESLPHVSFMVSDG-----FLW-WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~-----~~~-~~~~~A~~lgIP~i~~~~~ 57 (395)
..-|.+.++.. .||+|++-- ... -+..+|+.+|+|++.+...
T Consensus 98 a~~La~~i~~~-~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~~ 145 (254)
T PRK12342 98 AKALAAAIEKI-GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSK 145 (254)
T ss_pred HHHHHHHHHHh-CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEEE
Confidence 34566677777 899999843 333 4788999999999988654
No 180
>PRK06932 glycerate dehydrogenase; Provisional
Probab=54.30 E-value=53 Score=31.18 Aligned_cols=101 Identities=16% Similarity=0.195 Sum_probs=58.3
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+..|.+|.++ +++++.++..|.+++.. ... ... .. ...+.+..++|+.+|+ ++.
T Consensus 147 gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~---~~~---------~~-~~~~~~l~ell~~sDi--v~l 203 (314)
T PRK06932 147 GSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHK---GAS---------VC-REGYTPFEEVLKQADI--VTL 203 (314)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCC---ccc---------cc-ccccCCHHHHHHhCCE--EEE
Confidence 4678899999998 45566666678886543 221 000 01 1245678899999999 988
Q ss_pred cCCchhHHHHHhcCCcEEeccCCCchhHHHHHHhhhhceE-EEeeccCCCCcCccCHHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMADQPLNARMVTEEIKVA-LRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~DQ~~na~~v~~~lg~g-~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
|+-.+.- .....|+..+... +-| +.++. +|..-++.+.|.++++
T Consensus 204 ~~Plt~~----------------T~~li~~~~l~~m-k~ga~lIN~---aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 204 HCPLTET----------------TQNLINAETLALM-KPTAFLINT---GRGPLVDEQALLDALE 248 (314)
T ss_pred cCCCChH----------------HhcccCHHHHHhC-CCCeEEEEC---CCccccCHHHHHHHHH
Confidence 8843221 1234456555333 422 33333 3345566666666554
No 181
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=52.27 E-value=1.4e+02 Score=25.11 Aligned_cols=28 Identities=21% Similarity=0.181 Sum_probs=22.0
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
.+++++|+|- +.+.+|...++|+|++.-
T Consensus 64 ~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 64 LGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred CEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 3348888774 478899999999999963
No 182
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=51.05 E-value=1.8e+02 Score=28.31 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHh--CCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCCHH---HHhcccCccceeecCCc----hh
Q 048238 207 AQQLKEIATGLEQ--SKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVNQK---EILWHESVQGFLSHCGW----NS 276 (395)
Q Consensus 207 ~~~~~~l~~~l~~--~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pq~---~ll~~~~~~~~IthgG~----~s 276 (395)
.+.+.+++..+-+ .+.+|++.-+++....-++..|+. ....+.+.+-+|+. ++|.+-++ |++-.=. ..
T Consensus 210 iDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlTEafc~~ 287 (426)
T KOG1111|consen 210 IDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLTEAFCMV 287 (426)
T ss_pred hHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccHHHHHHHHH
Confidence 3555555554433 567887766553211223333332 36778888888865 47888888 8765421 36
Q ss_pred HHHHHhcCCcEEec
Q 048238 277 ALESICAGVPILAW 290 (395)
Q Consensus 277 ~~Ea~~~GvP~i~~ 290 (395)
+.||.+||.|++..
T Consensus 288 ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 288 IVEAASCGLPVVST 301 (426)
T ss_pred HHHHHhCCCEEEEe
Confidence 78999999999975
No 183
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=49.23 E-value=40 Score=28.53 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=26.0
Q ss_pred eeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEE
Q 048238 194 VMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVI 228 (395)
Q Consensus 194 vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~ 228 (395)
.+|+|+||....+...++..+.+|.+.+..-++..
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~ 37 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAV 37 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEe
Confidence 68999999987677778888888887664323333
No 184
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=47.80 E-value=71 Score=26.30 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=31.1
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRK 230 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~ 230 (395)
...+|++.+||......+.++++++.+. .+.+++++...
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 4689999999998878888899988874 46787776654
No 185
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=47.49 E-value=92 Score=29.75 Aligned_cols=104 Identities=21% Similarity=0.331 Sum_probs=66.8
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+-.+.+|.++ +++++-++..|.+++.--... .+. .+ .-.-..|++..++|+.+|+ ++-
T Consensus 146 gktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~---~~~-~~------~~~~~~y~~l~ell~~sDi--i~l 206 (324)
T COG1052 146 GKTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSP---NPE-AE------KELGARYVDLDELLAESDI--ISL 206 (324)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCC---ChH-HH------hhcCceeccHHHHHHhCCE--EEE
Confidence 4667788888887 445555555677766554332 111 00 0011367788999999999 888
Q ss_pred cCCchhHHHHHhcCCcEEeccCCCc--hhHHHHHHhhhhceEEE-eeccCCCCcCccCHHHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMAD--QPLNARMVTEEIKVALR-VETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~D--Q~~na~~v~~~lg~g~~-~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
|| |+..+ +-.|+..++.. +-|.. +.. +|.+-++.+.+.+++++
T Consensus 207 ~~------------------Plt~~T~hLin~~~l~~m-k~ga~lVNt---aRG~~VDe~ALi~AL~~ 252 (324)
T COG1052 207 HC------------------PLTPETRHLINAEELAKM-KPGAILVNT---ARGGLVDEQALIDALKS 252 (324)
T ss_pred eC------------------CCChHHhhhcCHHHHHhC-CCCeEEEEC---CCccccCHHHHHHHHHh
Confidence 88 66543 45588888655 66444 444 55677888888888765
No 186
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=46.76 E-value=1.1e+02 Score=28.89 Aligned_cols=55 Identities=18% Similarity=0.157 Sum_probs=39.9
Q ss_pred cccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 261 WHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
...++ +|+=||=||+++++. .++|++.+... .+|.. ..++.+++.+++.++
T Consensus 61 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGFl---------~~~~~~~~~~~l~~~ 115 (295)
T PRK01231 61 EVCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGFL---------TDIRPDELEFKLAEV 115 (295)
T ss_pred cCCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------ccccc---------ccCCHHHHHHHHHHH
Confidence 34666 999999999999875 47788888432 23322 245788899999998
Q ss_pred hCCC
Q 048238 337 MGGE 340 (395)
Q Consensus 337 l~~~ 340 (395)
++++
T Consensus 116 ~~g~ 119 (295)
T PRK01231 116 LDGH 119 (295)
T ss_pred HcCC
Confidence 8754
No 187
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=46.54 E-value=81 Score=29.85 Aligned_cols=101 Identities=15% Similarity=0.215 Sum_probs=60.8
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+..|.+|.++ +++++.+...|.+++.. .... ... ..+ ..+++..++|+.+|+ ++.
T Consensus 145 gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~-d~~~--~~~-------~~~---~~~~~l~ell~~sDv--v~l 202 (311)
T PRK08410 145 GKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYY-STSG--KNK-------NEE---YERVSLEELLKTSDI--ISI 202 (311)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhcCCEEEEE-CCCc--ccc-------ccC---ceeecHHHHhhcCCE--EEE
Confidence 5788999999997 44555555567776543 3210 000 011 135578889999999 888
Q ss_pred cCCchhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceE-EEeeccCCCCcCccCHHHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVA-LRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g-~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
|+ |+.. ....|+..+... +-| +.++. .|.+-++.+.|.++++.
T Consensus 203 h~------------------Plt~~T~~li~~~~~~~M-k~~a~lIN~---aRG~vVDe~AL~~AL~~ 248 (311)
T PRK08410 203 HA------------------PLNEKTKNLIAYKELKLL-KDGAILINV---GRGGIVNEKDLAKALDE 248 (311)
T ss_pred eC------------------CCCchhhcccCHHHHHhC-CCCeEEEEC---CCccccCHHHHHHHHHc
Confidence 87 6543 345566666444 433 33443 44566777777776653
No 188
>PLN02470 acetolactate synthase
Probab=46.23 E-value=53 Score=34.16 Aligned_cols=91 Identities=13% Similarity=0.112 Sum_probs=49.8
Q ss_pred ecccccCCH--HHHHHHHHHHHhCCCcEEEEEcCCC-CccchhHHHHhcCCCeEEecCC-CHH-------HHhcccCccc
Q 048238 199 FGSQAEISA--QQLKEIATGLEQSKVNFLWVIRKAE-SELGDGFEERVKGRGLVVRDWV-NQK-------EILWHESVQG 267 (395)
Q Consensus 199 ~Gs~~~~~~--~~~~~l~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-pq~-------~ll~~~~~~~ 267 (395)
|||....+. .....+++.|++.|.+.|+.+.+.. ..+-+.+. ...++.+..-. .+. .-...-..++
T Consensus 3 ~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~~l~dal~---~~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv 79 (585)
T PLN02470 3 FQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASMEIHQALT---RSNCIRNVLCRHEQGEVFAAEGYAKASGKVGV 79 (585)
T ss_pred cccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHh---ccCCceEEEeccHHHHHHHHHHHHHHhCCCEE
Confidence 566543322 3356677888888888777776531 11212221 11233221111 111 1112234556
Q ss_pred eeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 268 FLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 268 ~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
+++|.|- +.+++|...++|||++.-
T Consensus 80 ~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~G 110 (585)
T PLN02470 80 CIATSGPGATNLVTGLADALLDSVPLVAITG 110 (585)
T ss_pred EEECCCccHHHHHHHHHHHHhcCCcEEEEec
Confidence 8898884 478899999999999853
No 189
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=45.51 E-value=41 Score=31.67 Aligned_cols=58 Identities=12% Similarity=0.085 Sum_probs=42.1
Q ss_pred HHhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
++...+++ +|+=||=||++.+.. .++|++.+=.. .+|... +++.+++.+++
T Consensus 64 ~~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL~---------~~~~~~~~~~l 118 (296)
T PRK04539 64 ELGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG--------------HLGFLT---------QIPREYMTDKL 118 (296)
T ss_pred hcCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC--------------CCeEee---------ccCHHHHHHHH
Confidence 34345777 999999999999865 47899988321 234433 35788899999
Q ss_pred HHHhCCC
Q 048238 334 RELMGGE 340 (395)
Q Consensus 334 ~~~l~~~ 340 (395)
.++++++
T Consensus 119 ~~i~~g~ 125 (296)
T PRK04539 119 LPVLEGK 125 (296)
T ss_pred HHHHcCC
Confidence 9998764
No 190
>cd01981 Pchlide_reductase_B Pchlide_reductase_B: B protein of the NB protein complex of Protochlorophyllide (Pchlide)_reductase. Pchlide reductase catalyzes the reductive formation of chlorophyllide (chlide) from protochlorophyllide (pchlide) during biosynthesis of chlorophylls and bacteriochlorophylls. This group contains both the light-independent Pchlide reductase (DPOR) and light-dependent Pchlide reductase (LPOR). Angiosperms contain only LPOR, cyanobacteria, algae and gymnosperms contain both DPOR and LPOR, primitive anoxygenic photosynthetic bacteria contain only DPOR. NB is structurally similar to the FeMo protein of nitrogenase, forming an N2B2 heterotetramer. N and B are homologous to the FeMo alpha and beta subunits respectively. Also in common with nitrogenase in vitro DPOR activity requires ATP hydrolysis and dithoionite or ferredoxin as electron donor. The NB protein complex may serve as a catalytic site for Pchlide reduction similar to MoFe for nitrogen reduction.
Probab=44.75 E-value=33 Score=34.08 Aligned_cols=38 Identities=5% Similarity=0.113 Sum_probs=30.4
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEec
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~ 56 (395)
...+.+.+++. +||++|.+. ....+|+++|+|++.++.
T Consensus 359 ~~e~~~~i~~~-~pdliig~~---~~~~~a~~~gip~~~~~~ 396 (430)
T cd01981 359 HTEVGDMIART-EPELIFGTQ---MERHIGKRLDIPCAVISA 396 (430)
T ss_pred HHHHHHHHHhh-CCCEEEecc---hhhHHHHHcCCCEEEEeC
Confidence 46678888888 999999987 344578999999987744
No 191
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=44.66 E-value=64 Score=30.02 Aligned_cols=88 Identities=18% Similarity=0.159 Sum_probs=56.0
Q ss_pred HHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHH
Q 048238 180 WIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEI 259 (395)
Q Consensus 180 l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~l 259 (395)
..++|.+. +.++++.+|+... ....+...|.+.|.++....+.. . .+ .+...
T Consensus 123 av~~L~~A----~rI~~~G~g~S~~----vA~~~~~~l~~ig~~~~~~~d~~-------~------------~~-~~~~~ 174 (281)
T COG1737 123 AVELLAKA----RRIYFFGLGSSGL----VASDLAYKLMRIGLNVVALSDTH-------G------------QL-MQLAL 174 (281)
T ss_pred HHHHHHcC----CeEEEEEechhHH----HHHHHHHHHHHcCCceeEecchH-------H------------HH-HHHHh
Confidence 34455554 6677777777653 34556667777888877665431 0 11 14556
Q ss_pred hcccCccceeecCCch-h----HHHHHhcCCcEEeccCCCc
Q 048238 260 LWHESVQGFLSHCGWN-S----ALESICAGVPILAWPIMAD 295 (395)
Q Consensus 260 l~~~~~~~~IthgG~~-s----~~Ea~~~GvP~i~~P~~~D 295 (395)
+...|+..+|+|.|.+ . +..+-..|+|+|.+--..+
T Consensus 175 ~~~~Dv~i~iS~sG~t~e~i~~a~~ak~~ga~vIaiT~~~~ 215 (281)
T COG1737 175 LTPGDVVIAISFSGYTREIVEAAELAKERGAKVIAITDSAD 215 (281)
T ss_pred CCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEcCCCC
Confidence 6667777799999975 3 3344568999999854433
No 192
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=44.36 E-value=40 Score=31.86 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=40.3
Q ss_pred hcccCccceeecCCchhHHHHHhc----CCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 260 LWHESVQGFLSHCGWNSALESICA----GVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 260 l~~~~~~~~IthgG~~s~~Ea~~~----GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
...+++ +|+=||=||++.+... ++|++.+-.. .+|.. .+++.+++.+++.+
T Consensus 66 ~~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFL---------t~~~~~~~~~~l~~ 120 (305)
T PRK02649 66 DSSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFL---------TEAYLNQLDEAIDQ 120 (305)
T ss_pred ccCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCccc---------ccCCHHHHHHHHHH
Confidence 345666 9999999999999764 7899988321 23322 23567888899988
Q ss_pred HhCCC
Q 048238 336 LMGGE 340 (395)
Q Consensus 336 ~l~~~ 340 (395)
+++++
T Consensus 121 l~~g~ 125 (305)
T PRK02649 121 VLAGQ 125 (305)
T ss_pred HHcCC
Confidence 88765
No 193
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=43.35 E-value=1.2e+02 Score=29.66 Aligned_cols=61 Identities=20% Similarity=0.274 Sum_probs=37.1
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+-.|.+|.++ ..+++.+...|.+++.. .+. ... .+. ...+.+..++++.+|+ ++.
T Consensus 116 gktvGIIG~G~IG-------~~vA~~l~a~G~~V~~~-dp~---~~~--------~~~-~~~~~~L~ell~~sDi--I~l 173 (378)
T PRK15438 116 DRTVGIVGVGNVG-------RRLQARLEALGIKTLLC-DPP---RAD--------RGD-EGDFRSLDELVQEADI--LTF 173 (378)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEE-CCc---ccc--------ccc-ccccCCHHHHHhhCCE--EEE
Confidence 4667788888887 45566666678776533 221 000 010 1145678889999998 777
Q ss_pred cCC
Q 048238 271 HCG 273 (395)
Q Consensus 271 hgG 273 (395)
|+-
T Consensus 174 h~P 176 (378)
T PRK15438 174 HTP 176 (378)
T ss_pred eCC
Confidence 764
No 194
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=42.76 E-value=47 Score=31.21 Aligned_cols=58 Identities=22% Similarity=0.333 Sum_probs=41.6
Q ss_pred HHhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
.+...+++ +|+=||=||++.+.. .++|++.+-.. .+|.. .+++.+++.+++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL---------t~~~~~~~~~~l 114 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL---------ATVSKEEIEETI 114 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc---------cccCHHHHHHHH
Confidence 33345677 999999999998877 47899988321 23332 245778888999
Q ss_pred HHHhCCC
Q 048238 334 RELMGGE 340 (395)
Q Consensus 334 ~~~l~~~ 340 (395)
.++++++
T Consensus 115 ~~i~~g~ 121 (292)
T PRK01911 115 DELLNGD 121 (292)
T ss_pred HHHHcCC
Confidence 9988765
No 195
>CHL00076 chlB photochlorophyllide reductase subunit B
Probab=42.58 E-value=39 Score=34.50 Aligned_cols=37 Identities=8% Similarity=0.092 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
...+++.|++. +||+||.+. +...+|+++|||++.++
T Consensus 363 ~~ei~~~I~~~-~pdliiGs~---~er~ia~~lgiP~~~is 399 (513)
T CHL00076 363 HTEVGDMIARV-EPSAIFGTQ---MERHIGKRLDIPCGVIS 399 (513)
T ss_pred HHHHHHHHHhc-CCCEEEECc---hhhHHHHHhCCCEEEee
Confidence 46678888888 999999887 55567999999998765
No 196
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=42.54 E-value=36 Score=29.14 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCccEEEECCchhh--HHHHHHHcCCCcEEEe
Q 048238 16 PHFERALESLPHVSFMVSDGFLWW--TLDSANKFGFPRFVFY 55 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~~--~~~~A~~lgIP~i~~~ 55 (395)
+.+++++. . +||+||......- ....-+..|||++.+.
T Consensus 60 ~n~E~ll~-l-~PDlii~~~~~~~~~~~~~l~~~gIpvv~i~ 99 (186)
T cd01141 60 LNVELIVA-L-KPDLVILYGGFQAQTILDKLEQLGIPVLYVN 99 (186)
T ss_pred CCHHHHhc-c-CCCEEEEecCCCchhHHHHHHHcCCCEEEeC
Confidence 44555555 4 8999998654432 3344578999988774
No 197
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=42.21 E-value=54 Score=29.80 Aligned_cols=30 Identities=23% Similarity=0.246 Sum_probs=22.9
Q ss_pred ccE-EEECCchh-hHHHHHHHcCCCcEEEecc
Q 048238 28 VSF-MVSDGFLW-WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 28 pD~-vI~D~~~~-~~~~~A~~lgIP~i~~~~~ 57 (395)
||+ +|.|+..- -+..=|.++|||+|.+.-+
T Consensus 157 Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvDT 188 (252)
T COG0052 157 PDVLFVIDPRKEKIAVKEANKLGIPVVALVDT 188 (252)
T ss_pred CCEEEEeCCcHhHHHHHHHHHcCCCEEEEecC
Confidence 998 55677544 6677889999999988544
No 198
>TIGR01278 DPOR_BchB light-independent protochlorophyllide reductase, B subunit. This enzyme describes the B subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme. This subunit shows homology to the nitrogenase molybdenum-iron protein. It catalyzes a step in bacteriochlorophyll biosynthesis.
Probab=41.80 E-value=42 Score=34.30 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=30.2
Q ss_pred HHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEec
Q 048238 16 PHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~~ 56 (395)
..+.+.|++. +||+||.+. ....+|+++|||++.++.
T Consensus 354 ~ei~~~i~~~-~pdliiG~~---~er~~a~~lgip~~~i~~ 390 (511)
T TIGR01278 354 QEVADAIAAL-EPELVLGTQ---MERHSAKRLDIPCGVISA 390 (511)
T ss_pred HHHHHHHHhc-CCCEEEECh---HHHHHHHHcCCCEEEecC
Confidence 4777788888 999999887 566689999999986644
No 199
>COG1422 Predicted membrane protein [Function unknown]
Probab=41.43 E-value=80 Score=27.70 Aligned_cols=70 Identities=16% Similarity=0.158 Sum_probs=43.0
Q ss_pred hHHHHHhcCCcEEeccCCCch-hHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCCh-hHHHHHHHHHHH
Q 048238 276 SALESICAGVPILAWPIMADQ-PLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGEK-GEKARTKVKELS 353 (395)
Q Consensus 276 s~~Ea~~~GvP~i~~P~~~DQ-~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~-~~~~~~~a~~l~ 353 (395)
|+.++++.+.-.+..|+..=+ |.-.-.|... ...-+..-++..+.|.+ -+++++.+++++
T Consensus 24 ~~~~~i~~~ln~~f~P~i~~~~p~lvilV~av------------------i~gl~~~i~~~~liD~ekm~~~qk~m~efq 85 (201)
T COG1422 24 SIRDGIGGALNVVFGPLLSPLPPHLVILVAAV------------------ITGLYITILQKLLIDQEKMKELQKMMKEFQ 85 (201)
T ss_pred HHHHHHHHHHHHHHhhhccccccHHHHHHHHH------------------HHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 566666666666666664322 2233222211 23344555666666765 368999999999
Q ss_pred HHHHHhhhhC
Q 048238 354 EIARKAMEEE 363 (395)
Q Consensus 354 ~~~~~~~~~~ 363 (395)
+.+++|-+++
T Consensus 86 ~e~~eA~~~~ 95 (201)
T COG1422 86 KEFREAQESG 95 (201)
T ss_pred HHHHHHHHhC
Confidence 9999985555
No 200
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=41.33 E-value=46 Score=31.30 Aligned_cols=58 Identities=9% Similarity=0.063 Sum_probs=40.9
Q ss_pred HHhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHH
Q 048238 258 EILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTV 333 (395)
Q Consensus 258 ~ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i 333 (395)
.+...+++ +|+=||=||++.++. .++|++.+-.. .+|..- .++.+++.+++
T Consensus 59 ~~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~G--------------~lGFl~---------~~~~~~~~~~l 113 (292)
T PRK03378 59 EIGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINRG--------------NLGFLT---------DLDPDNALQQL 113 (292)
T ss_pred hcCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEECC--------------CCCccc---------ccCHHHHHHHH
Confidence 33345677 999999999999975 37888887321 124322 35678899999
Q ss_pred HHHhCCC
Q 048238 334 RELMGGE 340 (395)
Q Consensus 334 ~~~l~~~ 340 (395)
++++++.
T Consensus 114 ~~i~~g~ 120 (292)
T PRK03378 114 SDVLEGH 120 (292)
T ss_pred HHHHcCC
Confidence 9998764
No 201
>cd01965 Nitrogenase_MoFe_beta_like Nitrogenase_MoFe_beta_like: Nitrogenase MoFe protein, beta subunit_like. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. This group contains the beta subunits of component 1 of the three known genetically distinct types of nitrogenase systems: a molybdenum-dependent nitrogenase (Mo-nitrogenase), a vanadium-dependent nitrogenase (V-nitrogenase), and an iron-only nitrogenase (Fe-nitrogenase). These nitrogenase systems consist of component 1 (MoFe protein, VFe protein or, FeFe protein respectively) and, component 2 (Fe protein). The most widespread and best characterized of these systems is the Mo-nitrogenase. MoFe is an alpha2beta2 tetramer, the alternative nitrogenases are alpha2beta2delta2 hexamers having alpha and beta subunits similar to the alpha and beta subunits of MoFe. For MoFe, each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (Fe
Probab=41.06 E-value=45 Score=33.16 Aligned_cols=36 Identities=14% Similarity=0.155 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+.+++. +||+||.+. ....+|+++|||++.+
T Consensus 360 ~~el~~~i~~~-~pdliig~~---~~~~~a~~~~ip~i~~ 395 (428)
T cd01965 360 LWDLESLAKEE-PVDLLIGNS---HGRYLARDLGIPLVRV 395 (428)
T ss_pred HHHHHHHhhcc-CCCEEEECc---hhHHHHHhcCCCEEEe
Confidence 46677778887 999999988 3467899999999855
No 202
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=40.84 E-value=1.4e+02 Score=25.24 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=21.4
Q ss_pred cceeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 266 QGFLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 266 ~~~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
+.+++|+|- +.+.||...++|||++.-
T Consensus 62 gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 62 VAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred EEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 337888774 477899999999999954
No 203
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=40.77 E-value=46 Score=31.51 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=41.5
Q ss_pred HhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHH
Q 048238 259 ILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVR 334 (395)
Q Consensus 259 ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~ 334 (395)
+...+++ +|+=||=||++.+.. .++|++.+... .+|... +...+++.+++.
T Consensus 69 ~~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~---------~~~~~~~~~~l~ 123 (306)
T PRK03372 69 AADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA---------EAEAEDLDEAVE 123 (306)
T ss_pred cccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec---------cCCHHHHHHHHH
Confidence 3345677 999999999999876 48899988432 244433 346788888888
Q ss_pred HHhCCC
Q 048238 335 ELMGGE 340 (395)
Q Consensus 335 ~~l~~~ 340 (395)
++++++
T Consensus 124 ~i~~g~ 129 (306)
T PRK03372 124 RVVDRD 129 (306)
T ss_pred HHHcCC
Confidence 888765
No 204
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=40.71 E-value=45 Score=34.12 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=29.8
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
...+.+.|++. +||+||.+. ....+|+++|||++.++
T Consensus 351 ~~el~~~i~~~-~PdliiG~~---~er~~a~~lgiP~~~i~ 387 (519)
T PRK02910 351 YLEVEDAIAEA-APELVLGTQ---MERHSAKRLGIPCAVIS 387 (519)
T ss_pred HHHHHHHHHhc-CCCEEEEcc---hHHHHHHHcCCCEEEec
Confidence 35777788888 999999776 45668999999998664
No 205
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=40.66 E-value=2.4e+02 Score=24.35 Aligned_cols=142 Identities=11% Similarity=0.104 Sum_probs=70.3
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCc-cchhHHHHhcCCCeEEecCCC-------HHHHhccc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESE-LGDGFEERVKGRGLVVRDWVN-------QKEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p-------q~~ll~~~ 263 (395)
+.+++.-.||++.. ....+++.|.+.++.+-.+..+.... +.....+...+..++...|.+ +-++...+
T Consensus 2 k~Ill~vtGsiaa~---~~~~li~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~~v~~~~~~~~~~~~~~hi~l~~~a 78 (182)
T PRK07313 2 KNILLAVSGSIAAY---KAADLTSQLTKRGYQVTVLMTKAATKFITPLTLQVLSKNPVHLDVMDEHDPKLMNHIELAKRA 78 (182)
T ss_pred CEEEEEEeChHHHH---HHHHHHHHHHHCCCEEEEEEChhHHHHcCHHHHHHHhCCceEeccccccccCCcccccccccc
Confidence 34666666777543 23455666666677765555443222 111111222222343332321 22223333
Q ss_pred CccceeecCCchhHHHH-------------Hhc--CCcEEeccCC----Cch---hHHHHHHhhhhceEEEeeccC----
Q 048238 264 SVQGFLSHCGWNSALES-------------ICA--GVPILAWPIM----ADQ---PLNARMVTEEIKVALRVETCD---- 317 (395)
Q Consensus 264 ~~~~~IthgG~~s~~Ea-------------~~~--GvP~i~~P~~----~DQ---~~na~~v~~~lg~g~~~~~~~---- 317 (395)
| ..+|.-|-+||+.-. ++. ++|+++.|-. ... ..|..++.+. |+=+.-....
T Consensus 79 D-~~vIaPaTantlakiA~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~vi~p~~g~la~ 156 (182)
T PRK07313 79 D-LFLVAPATANTIAKLAHGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTLKED-GVQEIEPKEGLLAC 156 (182)
T ss_pred C-EEEEeeCCHhHHHHHHccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHHHHC-CCEEECCCCCcccc
Confidence 3 246666766654422 344 8999999963 333 4467777555 6554433200
Q ss_pred --CCCcCccCHHHHHHHHHHHhC
Q 048238 318 --GSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 318 --~~~~~~~~~~~l~~~i~~~l~ 338 (395)
.+...-.+.++|.+.+.+.+.
T Consensus 157 ~~~g~g~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 157 GDEGYGALADIETILETIENTLK 179 (182)
T ss_pred CCccCCCCCCHHHHHHHHHHHhc
Confidence 001223566777777766553
No 206
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=40.50 E-value=1.7e+02 Score=28.11 Aligned_cols=106 Identities=18% Similarity=0.274 Sum_probs=65.2
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+..+.+|+++ ..+++.|...+..+....... ..++...+. + ..++...++++.+|+ +|-
T Consensus 162 gK~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~--~~~~~~~~~----~---~~~~d~~~~~~~sD~--ivv 223 (336)
T KOG0069|consen 162 GKTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQ--LPPEEAYEY----Y---AEFVDIEELLANSDV--IVV 223 (336)
T ss_pred CCEEEEecCcHHH-------HHHHHhhhhccceeeeecccC--CchhhHHHh----c---ccccCHHHHHhhCCE--EEE
Confidence 4678899999998 456666666674444443321 112211111 1 125567889999998 777
Q ss_pred cCCchhHHHHHhcCCcEEeccCCC--chhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 271 HCGWNSALESICAGVPILAWPIMA--DQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~~~--DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
|| |+.. ..-.|...+++. +-|..+-- -.|..-++.+.+.+++++
T Consensus 224 ~~------------------pLt~~T~~liNk~~~~~m-k~g~vlVN--~aRG~iide~~l~eaL~s 269 (336)
T KOG0069|consen 224 NC------------------PLTKETRHLINKKFIEKM-KDGAVLVN--TARGAIIDEEALVEALKS 269 (336)
T ss_pred ec------------------CCCHHHHHHhhHHHHHhc-CCCeEEEe--ccccccccHHHHHHHHhc
Confidence 76 7753 456688888666 77666542 144566777777777653
No 207
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=40.21 E-value=54 Score=31.43 Aligned_cols=48 Identities=8% Similarity=0.046 Sum_probs=34.5
Q ss_pred HHHHhcHHHHHHHHhcCCCccEEEECCchh-------hH---HHHHHHcCCCcEEEecc
Q 048238 9 RATKLMQPHFERALESLPHVSFMVSDGFLW-------WT---LDSANKFGFPRFVFYGM 57 (395)
Q Consensus 9 ~a~~~~~~~l~~~l~~~~kpD~vI~D~~~~-------~~---~~~A~~lgIP~i~~~~~ 57 (395)
...+.....+.+.+++. +||++|+-+.+. |+ ..+.++++||.+.-..-
T Consensus 63 en~eea~~~i~~mv~~~-~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vtaM~~ 120 (349)
T PF07355_consen 63 ENKEEALKKILEMVKKL-KPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTAMYE 120 (349)
T ss_pred hCHHHHHHHHHHHHHhc-CCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEEecc
Confidence 33455677888888998 999999998554 22 12457899999976544
No 208
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=40.19 E-value=1e+02 Score=29.37 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=40.4
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHH-hCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCcccee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLE-QSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFL 269 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I 269 (395)
.+.+..|.+|+++ +++++.+. ..|.+++..... .+.... ...++ .+++..++|+.+|+ ++
T Consensus 145 gktvGIiG~G~IG-------~~va~~l~~~fgm~V~~~~~~----~~~~~~---~~~~~---~~~~l~ell~~sDv--v~ 205 (323)
T PRK15409 145 HKTLGIVGMGRIG-------MALAQRAHFGFNMPILYNARR----HHKEAE---ERFNA---RYCDLDTLLQESDF--VC 205 (323)
T ss_pred CCEEEEEcccHHH-------HHHHHHHHhcCCCEEEEECCC----CchhhH---HhcCc---EecCHHHHHHhCCE--EE
Confidence 4678899999998 45555555 567776643221 111100 01122 35578889999999 99
Q ss_pred ecCCch
Q 048238 270 SHCGWN 275 (395)
Q Consensus 270 thgG~~ 275 (395)
.|+-.+
T Consensus 206 lh~plt 211 (323)
T PRK15409 206 IILPLT 211 (323)
T ss_pred EeCCCC
Confidence 888543
No 209
>PF10820 DUF2543: Protein of unknown function (DUF2543); InterPro: IPR020251 This entry contains proteins with no known function.
Probab=39.48 E-value=86 Score=22.35 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=27.7
Q ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHhh
Q 048238 331 KTVRELMGGEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKYE 382 (395)
Q Consensus 331 ~~i~~~l~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~ 382 (395)
--|.++++|+ .+.+.|++ ++.++ . |-..+.++++-+.|++|+
T Consensus 38 lLitRLmnne---eIsEeaQ~--EMA~e----A-gi~~~rID~IA~fLNqWG 79 (81)
T PF10820_consen 38 LLITRLMNNE---EISEEAQQ--EMASE----A-GIDEQRIDDIANFLNQWG 79 (81)
T ss_pred HHHHHHhccH---hhhHHHHH--HHHHH----c-CCcHHHHHHHHHHHHHhc
Confidence 3456667777 55555442 33333 3 777888999999998875
No 210
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=39.21 E-value=50 Score=32.84 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=29.9
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+++++. +||++|.+.. ...+|+++|||++..
T Consensus 361 ~~e~~~~l~~~-~~dliiG~s~---~~~~a~~~~ip~~~~ 396 (429)
T cd03466 361 FFDIESYAKEL-KIDVLIGNSY---GRRIAEKLGIPLIRI 396 (429)
T ss_pred HHHHHHHHHhc-CCCEEEECch---hHHHHHHcCCCEEEe
Confidence 46778888888 9999999883 567899999999855
No 211
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=38.45 E-value=63 Score=25.78 Aligned_cols=39 Identities=0% Similarity=-0.107 Sum_probs=28.3
Q ss_pred HHHHHHhcCCCccEEEECCchh---hHHHHHHHcC-CCcEEEec
Q 048238 17 HFERALESLPHVSFMVSDGFLW---WTLDSANKFG-FPRFVFYG 56 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D~~~~---~~~~~A~~lg-IP~i~~~~ 56 (395)
.+..++++. +||+|.+..... .+..+++..+ +|.+....
T Consensus 65 ~l~k~ik~~-~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 65 RLRKIIKKE-KPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHHHhccC-CCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 778889998 999998887554 2333567788 88885433
No 212
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=38.02 E-value=53 Score=26.51 Aligned_cols=38 Identities=13% Similarity=0.423 Sum_probs=28.0
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHh--CCCcEEEEEc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQ--SKVNFLWVIR 229 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~--~~~~~i~~~~ 229 (395)
+.+++++|||......+.+..+.+.+++ .+..+-|..-
T Consensus 1 ~aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 1 KAILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 3689999999987555778888888854 4556666654
No 213
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=37.75 E-value=2.5e+02 Score=23.60 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=21.2
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
.++++++.|- +.+.||...++|+|++.-
T Consensus 60 ~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 60 LGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 3447777663 477899999999999963
No 214
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=37.72 E-value=6.1e+02 Score=28.19 Aligned_cols=104 Identities=12% Similarity=0.066 Sum_probs=59.7
Q ss_pred CCCHH---HHhcccCccceee---cCCchhHH-HHHhcCC---cEEeccCCCchhHHHHHHhhhhc-eEEEeeccCCCCc
Q 048238 253 WVNQK---EILWHESVQGFLS---HCGWNSAL-ESICAGV---PILAWPIMADQPLNARMVTEEIK-VALRVETCDGSVR 321 (395)
Q Consensus 253 ~~pq~---~ll~~~~~~~~It---hgG~~s~~-Ea~~~Gv---P~i~~P~~~DQ~~na~~v~~~lg-~g~~~~~~~~~~~ 321 (395)
.+|+. .+++.+++ ++. .-|+|-+. |+++++. -+++++-+. --|. .|| -|+.+++
T Consensus 447 ~l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfa---Gaa~----~L~~~AllVNP------ 511 (934)
T PLN03064 447 SLDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFA---GAAQ----SLGAGAILVNP------ 511 (934)
T ss_pred CCCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEEeCCC---chHH----HhCCceEEECC------
Confidence 35544 46677887 554 45887554 9999954 122223221 1122 223 4677764
Q ss_pred CccCHHHHHHHHHHHhC-CChhHHHHHHHHHHHHHHHHhhhhCCCchHHHHHHHHHHHHHh
Q 048238 322 GFVKWQGLEKTVRELMG-GEKGEKARTKVKELSEIARKAMEEEKGSSWRCLDMLLDETCKY 381 (395)
Q Consensus 322 ~~~~~~~l~~~i~~~l~-~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~l~~~~~~~ 381 (395)
.+.+.++++|.+.|+ +++ ..+++.+++.+.+. . -+...-++.|++.|...
T Consensus 512 --~D~~~vA~AI~~AL~M~~~--Er~~r~~~~~~~V~----~--~d~~~Wa~~fl~~L~~~ 562 (934)
T PLN03064 512 --WNITEVAASIAQALNMPEE--EREKRHRHNFMHVT----T--HTAQEWAETFVSELNDT 562 (934)
T ss_pred --CCHHHHHHHHHHHHhCCHH--HHHHHHHHHHhhcc----c--CCHHHHHHHHHHHHHHH
Confidence 589999999999987 442 44445555555443 1 23444566667666654
No 215
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=36.94 E-value=4.2e+02 Score=26.10 Aligned_cols=142 Identities=13% Similarity=0.187 Sum_probs=77.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCcc--chhHHHHhcCCCeEEecC-------CCHHHHhc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESEL--GDGFEERVKGRGLVVRDW-------VNQKEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------~pq~~ll~ 261 (395)
.+.+++.-.||+... ....+++.|.+.++.+-.+.......+ +..++ ...+..++..-| .++-++..
T Consensus 6 ~k~IllgvTGsiaa~---k~~~lv~~L~~~g~~V~vv~T~~A~~fi~~~~l~-~l~~~~V~~~~~~~~~~~~~~hi~l~~ 81 (399)
T PRK05579 6 GKRIVLGVSGGIAAY---KALELVRRLRKAGADVRVVMTEAAKKFVTPLTFQ-ALSGNPVSTDLWDPAAEAAMGHIELAK 81 (399)
T ss_pred CCeEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhHHHHHhHHHHH-HhhCCceEccccccccCCCcchhhccc
Confidence 356777777887542 445566777777887766655432111 11121 122222333222 23444555
Q ss_pred ccCccceeecCCchhHHHH-------------HhcCCcEEeccCCC----c---hhHHHHHHhhhhceEEEeecc-----
Q 048238 262 HESVQGFLSHCGWNSALES-------------ICAGVPILAWPIMA----D---QPLNARMVTEEIKVALRVETC----- 316 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea-------------~~~GvP~i~~P~~~----D---Q~~na~~v~~~lg~g~~~~~~----- 316 (395)
.+|+ .+|.-|-+||+.-. +.+++|+++.|-+. . ...|..++.+. |+-+.-...
T Consensus 82 ~aD~-~vVaPaTaNtlaKiA~GiaDnllt~~~la~~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~-G~~ii~P~~g~la~ 159 (399)
T PRK05579 82 WADL-VLIAPATADLIAKLAHGIADDLLTTTLLATTAPVLVAPAMNTQMWENPATQRNLATLRSR-GVEIIGPASGRLAC 159 (399)
T ss_pred ccCE-EEEeeCCHHHHHHHHcccCCcHHHHHHHhcCCCEEEEeCCChhHcCCHHHHHHHHHHHHC-CCEEECCCCccccC
Confidence 4554 46777777766543 55799999999532 3 34477777555 766542210
Q ss_pred -CCCCcCccCHHHHHHHHHHHhC
Q 048238 317 -DGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 317 -~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+.+...-.+.++|...+.+.+.
T Consensus 160 ~~~g~gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 160 GDVGPGRMAEPEEIVAAAERALS 182 (399)
T ss_pred CCcCCCCCCCHHHHHHHHHHHhh
Confidence 0011223567888888877663
No 216
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=36.87 E-value=1.7e+02 Score=25.20 Aligned_cols=98 Identities=14% Similarity=0.062 Sum_probs=51.4
Q ss_pred chHHHHHhhhccCCCCCeeEEEecc-cccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHH-HhcC---CCeEEe
Q 048238 177 KPAWIRWLDRKLDEGSSVMYVAFGS-QAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEE-RVKG---RGLVVR 251 (395)
Q Consensus 177 ~~~l~~~l~~~~~~~~~vv~vs~Gs-~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~---~~~~~~ 251 (395)
-.++-++|.+. ...+|+.|+ .+ ...++.++..+.+-.++=+... .+.+ +... ...+++
T Consensus 21 A~~lG~~la~~-----g~~lV~GGg~~G-----lM~a~a~ga~~~gG~viGi~p~-------~l~~~~~~~~~~~~~i~~ 83 (178)
T TIGR00730 21 AAELGAYLAGQ-----GWGLVYGGGRVG-----LMGAIADAAMENGGTAVGVNPS-------GLFSGEVVHQNLTELIEV 83 (178)
T ss_pred HHHHHHHHHHC-----CCEEEECCChHh-----HHHHHHHHHHhcCCeEEEecch-------hhhhhhccCCCCCceEEE
Confidence 34555666554 456666665 33 3455666665555554333221 1111 0111 122233
Q ss_pred cCCC-HHHHhcccCccceeecCCchhHHHHHh---------cCCcEEecc
Q 048238 252 DWVN-QKEILWHESVQGFLSHCGWNSALESIC---------AGVPILAWP 291 (395)
Q Consensus 252 ~~~p-q~~ll~~~~~~~~IthgG~~s~~Ea~~---------~GvP~i~~P 291 (395)
.... ...+|...+-..++--||.||+-|.+. +.+|++++=
T Consensus 84 ~~~~~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 84 NGMHERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred CCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 3333 444555544445667788999988844 489988763
No 217
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=36.62 E-value=1.7e+02 Score=28.28 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=27.1
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA 231 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~ 231 (395)
.++++++|+.+- -.-+..++++|.+.|+.|.+.+...
T Consensus 2 rIl~~~~p~~GH--v~P~l~la~~L~~rGh~V~~~t~~~ 38 (401)
T cd03784 2 RVLITTIGSRGD--VQPLVALAWALRAAGHEVRVATPPE 38 (401)
T ss_pred eEEEEeCCCcch--HHHHHHHHHHHHHCCCeEEEeeCHh
Confidence 367888887653 3345678888888999988887753
No 218
>PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=36.26 E-value=59 Score=30.18 Aligned_cols=54 Identities=19% Similarity=0.300 Sum_probs=38.8
Q ss_pred ccCccceeecCCchhHHHHHh-cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 262 HESVQGFLSHCGWNSALESIC-AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~-~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
.+++ +|+=||=||++.++. ..+|++.+-.. .+|.. .+++.+++.++++++++++
T Consensus 52 ~~D~--vi~lGGDGT~L~a~~~~~~PilGIN~G--------------~lGFL---------~~~~~~~~~~~l~~i~~g~ 106 (271)
T PRK01185 52 NADV--IITIGGDGTILRTLQRAKGPILGINMG--------------GLGFL---------TEIEIDEVGSAIKKLIRGE 106 (271)
T ss_pred CCCE--EEEEcCcHHHHHHHHHcCCCEEEEECC--------------CCccC---------cccCHHHHHHHHHHHHcCC
Confidence 5666 999999999999887 45687777221 23332 2457788889999988764
No 219
>cd01976 Nitrogenase_MoFe_alpha Nitrogenase_MoFe_alpha_II: Nitrogenase MoFe protein, beta subunit. A group of proteins similar to the alpha subunit of the MoFe protein of the molybdenum (Mo-) nitrogenase. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Mo-nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=36.12 E-value=44 Score=33.19 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=30.4
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
...+.+++++. +||++|.... ...+|+++|||+..+.
T Consensus 358 ~~e~~~~i~~~-~pDliig~~~---~~~~a~k~giP~~~~~ 394 (421)
T cd01976 358 HYELEEFVKRL-KPDLIGSGIK---EKYVFQKMGIPFRQMH 394 (421)
T ss_pred HHHHHHHHHHh-CCCEEEecCc---chhhhhhcCCCeEeCC
Confidence 56778888888 9999998885 5568999999997553
No 220
>PRK09219 xanthine phosphoribosyltransferase; Validated
Probab=35.95 E-value=89 Score=27.27 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=28.9
Q ss_pred cHHHHHHHHhcCCCccEEEECC--chhhHHHHHHHcCCCcEEEec
Q 048238 14 MQPHFERALESLPHVSFMVSDG--FLWWTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~--~~~~~~~~A~~lgIP~i~~~~ 56 (395)
....+.+.+++. ++|+|++=. -.+.+..+|..+|+|++..--
T Consensus 38 i~~~la~~~~~~-~~D~Ivg~e~~GiplA~~lA~~Lg~p~v~vRK 81 (189)
T PRK09219 38 IGKEFARRFKDE-GITKILTIEASGIAPAVMAALALGVPVVFAKK 81 (189)
T ss_pred HHHHHHHHhccC-CCCEEEEEccccHHHHHHHHHHHCCCEEEEEE
Confidence 344444445555 899988643 344777899999999997743
No 221
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=35.73 E-value=47 Score=30.65 Aligned_cols=39 Identities=10% Similarity=0.296 Sum_probs=25.5
Q ss_pred CeeEEEecccccCC-HHHHHHHHHHHHh--CCCcEEEEEcCC
Q 048238 193 SVMYVAFGSQAEIS-AQQLKEIATGLEQ--SKVNFLWVIRKA 231 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~-~~~~~~l~~~l~~--~~~~~i~~~~~~ 231 (395)
.++++||||..... ...+..+-+.++. +++.|.|.+.+.
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS~ 43 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTSR 43 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-H
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchHH
Confidence 57899999987644 4477777777766 688999998764
No 222
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=35.54 E-value=71 Score=29.53 Aligned_cols=55 Identities=11% Similarity=0.137 Sum_probs=38.2
Q ss_pred ccCccceeecCCchhHHHHHhc-----CCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHH
Q 048238 262 HESVQGFLSHCGWNSALESICA-----GVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVREL 336 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~-----GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~ 336 (395)
.+++ +|+=||=||++.++.. .+|++.+-..+ .+|.. .+++.+++.+++.++
T Consensus 39 ~~D~--vi~lGGDGT~L~a~~~~~~~~~~pilgIn~~G-------------~lGFL---------~~~~~~~~~~~l~~i 94 (264)
T PRK03501 39 NANI--IVSIGGDGTFLQAVRKTGFREDCLYAGISTKD-------------QLGFY---------CDFHIDDLDKMIQAI 94 (264)
T ss_pred CccE--EEEECCcHHHHHHHHHhcccCCCeEEeEecCC-------------CCeEc---------ccCCHHHHHHHHHHH
Confidence 3566 9999999999999874 56777763300 23332 245778888888888
Q ss_pred hCCC
Q 048238 337 MGGE 340 (395)
Q Consensus 337 l~~~ 340 (395)
++++
T Consensus 95 ~~g~ 98 (264)
T PRK03501 95 TKEE 98 (264)
T ss_pred HcCC
Confidence 8654
No 223
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=35.53 E-value=37 Score=29.08 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=20.9
Q ss_pred ccCccceeecCCchhHHHHHhcCCcEEeccCCC
Q 048238 262 HESVQGFLSHCGWNSALESICAGVPILAWPIMA 294 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~GvP~i~~P~~~ 294 (395)
+..+..+|++||...+..... ++|+|-+|..+
T Consensus 32 ~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 32 SEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred hcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 344444999999888888877 99999999853
No 224
>COG3200 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=35.27 E-value=94 Score=29.77 Aligned_cols=54 Identities=13% Similarity=0.326 Sum_probs=38.6
Q ss_pred CchHHHHHhhh---ccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCC
Q 048238 176 SKPAWIRWLDR---KLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKA 231 (395)
Q Consensus 176 ~~~~l~~~l~~---~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~ 231 (395)
.++++.+.+|. .-++.+-.+++-||+... .+.+-.++++.+..|.++||++.+.
T Consensus 295 ~~d~ll~l~d~LnP~nepGRLtLi~RmG~dKV--~d~LP~li~av~~eG~~VvWs~DPM 351 (445)
T COG3200 295 TPDELLELIDRLNPHNEPGRLTLIARMGADKV--GDRLPPLVEAVEAEGHQVIWSSDPM 351 (445)
T ss_pred CHHHHHHHHHhcCCCCCCceEEeehhhcchHH--hhhhhHHHHHHHHcCCceEEecCCC
Confidence 45666666554 213356678888888742 3567778999999999999999875
No 225
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=35.13 E-value=1.2e+02 Score=31.43 Aligned_cols=27 Identities=7% Similarity=0.149 Sum_probs=21.3
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.|- ++++||...++|+|++.
T Consensus 77 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 77 PAVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3447877764 47899999999999885
No 226
>TIGR01285 nifN nitrogenase molybdenum-iron cofactor biosynthesis protein NifN. This protein forms a complex with NifE, and appears as a NifEN in some species. NifEN is a required for producing the molybdenum-iron cofactor of molybdenum-requiring nitrogenases. NifN is closely related to the nitrogenase molybdenum-iron protein beta chain NifK. This model describes most examples of NifN but excludes some cases, such as the putative NifN of Chlorobium tepidum, for which a separate model may be created.
Probab=34.78 E-value=53 Score=32.72 Aligned_cols=35 Identities=9% Similarity=0.153 Sum_probs=29.2
Q ss_pred HHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 16 PHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
..+++++++. ++|++|... ....+|+++|||++-+
T Consensus 363 ~~l~~~i~~~-~~dliig~s---~~k~~A~~l~ip~ir~ 397 (432)
T TIGR01285 363 EDLEDLACAA-GADLLITNS---HGRALAQRLALPLVRA 397 (432)
T ss_pred HHHHHHHhhc-CCCEEEECc---chHHHHHHcCCCEEEe
Confidence 5778888888 999999877 4567999999999854
No 227
>cd01974 Nitrogenase_MoFe_beta Nitrogenase_MoFe_beta: Nitrogenase MoFe protein, beta subunit. The nitrogenase enzyme catalyzes the ATP-dependent reduction of dinitrogen to ammonia. The Molybdenum (Mo-) nitrogenase is the most widespread and best characterized of these systems. Mo-nitrogenase consists of the MoFe protein (component 1) and the Fe protein (component 2). MoFe is an alpha2beta2 tetramer. This group contains the beta subunit of the MoFe protein. Each alphabeta pair of MoFe contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha subunit. The Fe protein contains a single [4Fe-4S] cluster. Electrons are transferred from the [4Fe-4S] cluster of the Fe protein to the P-cluster of the MoFe and in turn to FeMoCo, the site of substrate reduction.
Probab=34.10 E-value=71 Score=31.85 Aligned_cols=38 Identities=16% Similarity=0.119 Sum_probs=29.9
Q ss_pred cHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 14 MQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
-...+.+.+++. +||++|... ....+|+++|||++.+.
T Consensus 365 d~~e~~~~i~~~-~pDliiG~s---~~~~~a~~~gip~v~~~ 402 (435)
T cd01974 365 DLWHLRSLLFTE-PVDLLIGNT---YGKYIARDTDIPLVRFG 402 (435)
T ss_pred CHHHHHHHHhhc-CCCEEEECc---cHHHHHHHhCCCEEEee
Confidence 355667778887 999999877 45678999999998653
No 228
>PRK15062 hydrogenase isoenzymes formation protein HypD; Provisional
Probab=34.05 E-value=1.4e+02 Score=28.81 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=24.8
Q ss_pred hHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEE
Q 048238 178 PAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLW 226 (395)
Q Consensus 178 ~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~ 226 (395)
-+-.+.-.+. ++|.+||++-|=-.. .+.....+.++.++.-.+|-+
T Consensus 119 ldAl~iA~~n--P~k~vVF~avGFETT-aP~~A~~i~~A~~~~~~Nfsv 164 (364)
T PRK15062 119 LDALKIAREN--PDKEVVFFAIGFETT-APATAATLLQAKAEGLKNFSV 164 (364)
T ss_pred HHHHHHHHHC--CCCeEEEEecCchhc-cHHHHHHHHHHHHcCCCCEEE
Confidence 3344444444 678899888775543 234444555555554444433
No 229
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=33.80 E-value=73 Score=29.28 Aligned_cols=54 Identities=9% Similarity=0.224 Sum_probs=38.0
Q ss_pred ccCccceeecCCchhHHHHHh-cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHhCCC
Q 048238 262 HESVQGFLSHCGWNSALESIC-AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELMGGE 340 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~-~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~ 340 (395)
++++ +|+=||=||++.++. .++|++.+-.. ..|... .++.+++.+++.++++++
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl~---------~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFLS---------SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCcccc---------ccCHHHHHHHHHHHHcCC
Confidence 4566 999999999998876 57888877321 133322 356788888888887654
No 230
>PRK06436 glycerate dehydrogenase; Provisional
Probab=33.58 E-value=2.1e+02 Score=27.07 Aligned_cols=64 Identities=13% Similarity=0.187 Sum_probs=40.4
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+-.+.+|+++ +.+++.+...|.+++..-... .+ .++.. .+.+..++++.+|+ ++.
T Consensus 122 gktvgIiG~G~IG-------~~vA~~l~afG~~V~~~~r~~---~~---------~~~~~-~~~~l~ell~~aDi--v~~ 179 (303)
T PRK06436 122 NKSLGILGYGGIG-------RRVALLAKAFGMNIYAYTRSY---VN---------DGISS-IYMEPEDIMKKSDF--VLI 179 (303)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEECCCC---cc---------cCccc-ccCCHHHHHhhCCE--EEE
Confidence 4678899999997 345555555688765332211 01 12211 24567889999999 999
Q ss_pred cCCchh
Q 048238 271 HCGWNS 276 (395)
Q Consensus 271 hgG~~s 276 (395)
|+-.+.
T Consensus 180 ~lp~t~ 185 (303)
T PRK06436 180 SLPLTD 185 (303)
T ss_pred CCCCCc
Confidence 987653
No 231
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=33.44 E-value=1.6e+02 Score=24.88 Aligned_cols=27 Identities=11% Similarity=0.122 Sum_probs=20.4
Q ss_pred cceeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 266 QGFLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 266 ~~~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
+.+++|.|- +++.+|...++|+|++.-
T Consensus 66 ~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 66 GVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp EEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred eEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 338888873 578889999999998865
No 232
>PRK00923 sirohydrochlorin cobaltochelatase; Reviewed
Probab=33.05 E-value=2.5e+02 Score=22.27 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=21.6
Q ss_pred CCeeEEEecccccCCHHHHHHHHHHHHh
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIATGLEQ 219 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~~~l~~ 219 (395)
+.+|+++.||........+.++...+++
T Consensus 2 ~~lvlv~hGS~~~~~~~~~~~~~~~l~~ 29 (126)
T PRK00923 2 LGLLLVGHGSRLPYNKEVVTKIAEKIKE 29 (126)
T ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHH
Confidence 4689999999865445778888888876
No 233
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase
Probab=32.68 E-value=77 Score=32.13 Aligned_cols=54 Identities=7% Similarity=0.118 Sum_probs=40.3
Q ss_pred cccCccceeecCCchhHHHHHhc----CCcEEeccCCCchhHHHHHHhhhhc-eEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 261 WHESVQGFLSHCGWNSALESICA----GVPILAWPIMADQPLNARMVTEEIK-VALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~----GvP~i~~P~~~DQ~~na~~v~~~lg-~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
..+++ +|+=||=||++.+... ++|++.+- . | +|..- .+..+++.++|.+
T Consensus 261 ~~~Dl--VIsiGGDGTlL~Aar~~~~~~iPILGIN--------------~-G~LGFLt---------~i~~~e~~~~Le~ 314 (508)
T PLN02935 261 TKVDL--VITLGGDGTVLWAASMFKGPVPPVVPFS--------------M-GSLGFMT---------PFHSEQYRDCLDA 314 (508)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEe--------------C-CCcceec---------ccCHHHHHHHHHH
Confidence 45677 9999999999999763 57888772 2 2 45432 4578899999999
Q ss_pred HhCCC
Q 048238 336 LMGGE 340 (395)
Q Consensus 336 ~l~~~ 340 (395)
+++++
T Consensus 315 il~G~ 319 (508)
T PLN02935 315 ILKGP 319 (508)
T ss_pred HHcCC
Confidence 98765
No 234
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=32.65 E-value=1e+02 Score=26.81 Aligned_cols=44 Identities=14% Similarity=0.293 Sum_probs=31.5
Q ss_pred HHHHHHHHhcCCCcc--EEEECCchh-hHHHHHHHcCCCcEEEecchH
Q 048238 15 QPHFERALESLPHVS--FMVSDGFLW-WTLDSANKFGFPRFVFYGMNN 59 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD--~vI~D~~~~-~~~~~A~~lgIP~i~~~~~~~ 59 (395)
...++++|++. ..+ ++|-..+-. ++.-+|+++|+|.|.+.|+-.
T Consensus 46 ~~~l~~~i~~~-~~~~~~liGSSlGG~~A~~La~~~~~~avLiNPav~ 92 (187)
T PF05728_consen 46 IAQLEQLIEEL-KPENVVLIGSSLGGFYATYLAERYGLPAVLINPAVR 92 (187)
T ss_pred HHHHHHHHHhC-CCCCeEEEEEChHHHHHHHHHHHhCCCEEEEcCCCC
Confidence 45667777776 544 666666444 777799999999988877643
No 235
>TIGR01286 nifK nitrogenase molybdenum-iron protein beta chain. This model represents the majority of known sequences of the nitrogenase molybdenum-iron protein beta subunit. A distinct clade in a phylogenetic tree contains molybdenum-iron, vanadium-iron, and iron-iron forms of nitrogenase beta subunit and is excluded from this model. Nitrogenase, also called dinitrogenase, is responsible for nitrogen fixation. Note: the trusted cutoff score has recently been lowered to include an additional family in which the beta subunit is shorter by about 50 amino acids at the N-terminus. In species with the shorter form of the beta subunit, the alpha subunit has a novel insert of similar length.
Probab=32.26 E-value=75 Score=32.51 Aligned_cols=37 Identities=11% Similarity=0.079 Sum_probs=29.7
Q ss_pred cHHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 14 MQPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
-..+++++|.+. +||++|... .+..+|+++|||.+-+
T Consensus 425 Dl~~l~~~l~~~-~~DlliG~s---~~k~~a~~~giPlir~ 461 (515)
T TIGR01286 425 DLWHLRSLVFTE-PVDFLIGNS---YGKYIQRDTLVPLIRI 461 (515)
T ss_pred CHHHHHHHHhhc-CCCEEEECc---hHHHHHHHcCCCEEEe
Confidence 356677788887 999999877 4567899999998855
No 236
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=32.23 E-value=84 Score=31.01 Aligned_cols=46 Identities=4% Similarity=0.026 Sum_probs=33.7
Q ss_pred HHhcHHHHHHHHhcCCCccEEEECCchh-------hHH---HHHHHcCCCcEEEecc
Q 048238 11 TKLMQPHFERALESLPHVSFMVSDGFLW-------WTL---DSANKFGFPRFVFYGM 57 (395)
Q Consensus 11 ~~~~~~~l~~~l~~~~kpD~vI~D~~~~-------~~~---~~A~~lgIP~i~~~~~ 57 (395)
.+.....+.+.+++. +||++|+-+.+. |+. .+.++++||.+.-..-
T Consensus 61 ~eea~~~i~~mv~k~-~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vtaMy~ 116 (431)
T TIGR01917 61 LEEAKAKVLEMIKGA-NPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTAMYE 116 (431)
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEecc
Confidence 455567888889998 999999987554 222 2447799999977643
No 237
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=32.18 E-value=85 Score=30.97 Aligned_cols=46 Identities=7% Similarity=-0.016 Sum_probs=33.8
Q ss_pred HHhcHHHHHHHHhcCCCccEEEECCchh-------hHH---HHHHHcCCCcEEEecc
Q 048238 11 TKLMQPHFERALESLPHVSFMVSDGFLW-------WTL---DSANKFGFPRFVFYGM 57 (395)
Q Consensus 11 ~~~~~~~l~~~l~~~~kpD~vI~D~~~~-------~~~---~~A~~lgIP~i~~~~~ 57 (395)
.+.....+.+.+++. +||++|+-+.+. |+. .+.++++||.+.-..-
T Consensus 61 ~eea~~~i~~mv~k~-~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~My~ 116 (431)
T TIGR01918 61 LEEAVARVLEMLKDK-EPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTSMYV 116 (431)
T ss_pred HHHHHHHHHHHHHhc-CCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEEecc
Confidence 455567888889998 999999987554 221 2447799999977643
No 238
>PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=31.77 E-value=96 Score=28.80 Aligned_cols=58 Identities=9% Similarity=0.031 Sum_probs=39.7
Q ss_pred HHHHhcccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHH
Q 048238 256 QKEILWHESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEK 331 (395)
Q Consensus 256 q~~ll~~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~ 331 (395)
+.++...+++ +|+=||=||++.+.. .++|++.+-.. .+|... .++.+++.+
T Consensus 36 ~~~~~~~~d~--vi~iGGDGT~L~aa~~~~~~~~PilgIn~G--------------~lGFL~---------~~~~~~~~~ 90 (272)
T PRK02231 36 LEEIGQRAQL--AIVIGGDGNMLGRARVLAKYDIPLIGINRG--------------NLGFLT---------DIDPKNAYE 90 (272)
T ss_pred hHHhCcCCCE--EEEECCcHHHHHHHHHhccCCCcEEEEeCC--------------CCcccc---------cCCHHHHHH
Confidence 3445456777 999999999998755 37898888321 244332 346677777
Q ss_pred HHHHHhC
Q 048238 332 TVRELMG 338 (395)
Q Consensus 332 ~i~~~l~ 338 (395)
.+.++++
T Consensus 91 ~l~~~~~ 97 (272)
T PRK02231 91 QLEACLE 97 (272)
T ss_pred HHHHHHh
Confidence 7777776
No 239
>cd01143 YvrC Periplasmic binding protein YvrC. These proteins are predicted to function as initial receptors in ABC transport of metal ions in eubacteria and archaea. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains.
Probab=31.67 E-value=73 Score=27.19 Aligned_cols=39 Identities=18% Similarity=0.321 Sum_probs=25.1
Q ss_pred HHHHHHHhcCCCccEEEECCchhh-HHHHHHHcCCCcEEEec
Q 048238 16 PHFERALESLPHVSFMVSDGFLWW-TLDSANKFGFPRFVFYG 56 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~~-~~~~A~~lgIP~i~~~~ 56 (395)
+.+++++ +. +||+||....... ...--++.|+|++.+..
T Consensus 51 ~n~E~l~-~l-~PDlii~~~~~~~~~~~~l~~~gi~v~~~~~ 90 (195)
T cd01143 51 PNVEKIV-AL-KPDLVIVSSSSLAELLEKLKDAGIPVVVLPA 90 (195)
T ss_pred CCHHHHh-cc-CCCEEEEcCCcCHHHHHHHHHcCCcEEEeCC
Confidence 4455544 44 8999998654332 33445778999887754
No 240
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=31.27 E-value=3.6e+02 Score=25.30 Aligned_cols=27 Identities=7% Similarity=0.331 Sum_probs=24.2
Q ss_pred ccCccceeecCCchhHHHHHhcCCcEEec
Q 048238 262 HESVQGFLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
.+|+ +|+.++..+..-|-..|+|.+.+
T Consensus 93 ~pDl--Vi~d~~~~~~~aA~~~~iP~i~i 119 (321)
T TIGR00661 93 NPDL--IISDFEYSTVVAAKLLKIPVICI 119 (321)
T ss_pred CCCE--EEECCchHHHHHHHhcCCCEEEE
Confidence 4677 99999999999999999999966
No 241
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=31.07 E-value=2.2e+02 Score=23.33 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=20.6
Q ss_pred cceeecCC------chhHHHHHhcCCcEEeccC
Q 048238 266 QGFLSHCG------WNSALESICAGVPILAWPI 292 (395)
Q Consensus 266 ~~~IthgG------~~s~~Ea~~~GvP~i~~P~ 292 (395)
.++++|+| .+.+.++...++|+|++.-
T Consensus 61 ~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 61 GVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred EEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 34888855 3477888999999999854
No 242
>cd01147 HemV-2 Metal binding protein HemV-2. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=30.75 E-value=69 Score=28.94 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=24.9
Q ss_pred HHHHHHHhcCCCccEEEECCchhh--HHH-HHHHcCCCcEEEecc
Q 048238 16 PHFERALESLPHVSFMVSDGFLWW--TLD-SANKFGFPRFVFYGM 57 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~~--~~~-~A~~lgIP~i~~~~~ 57 (395)
+.+++++. . +||+||....... ... +.+..|||++.+...
T Consensus 65 ~n~E~i~~-l-~PDLIi~~~~~~~~~~~~~l~~~~gipvv~~~~~ 107 (262)
T cd01147 65 PNYEKIAA-L-KPDVVIDVGSDDPTSIADDLQKKTGIPVVVLDGG 107 (262)
T ss_pred CCHHHHHh-c-CCCEEEEecCCccchhHHHHHHhhCCCEEEEecC
Confidence 34444444 4 8999998764432 122 334589999888653
No 243
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=30.60 E-value=1.2e+02 Score=26.22 Aligned_cols=37 Identities=11% Similarity=0.036 Sum_probs=27.0
Q ss_pred HHHHHHhcCCCccEEEECC--chhhHHHHHHHcCCCcEEE
Q 048238 17 HFERALESLPHVSFMVSDG--FLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D~--~~~~~~~~A~~lgIP~i~~ 54 (395)
.+.+...+. ++|.|++=- -+..+..+|.++|+|++..
T Consensus 44 ~~~~~~~~~-~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 44 ELAERYKDD-GIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred HHHHHhccc-CCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 445555555 799988753 3447888999999999966
No 244
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=30.58 E-value=5.1e+02 Score=25.14 Aligned_cols=128 Identities=11% Similarity=0.052 Sum_probs=77.4
Q ss_pred eEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCC-HHHHhcccCccceeecCC
Q 048238 195 MYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVN-QKEILWHESVQGFLSHCG 273 (395)
Q Consensus 195 v~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-q~~ll~~~~~~~~IthgG 273 (395)
++|. |.-...+.+.+.+.++.+...+.+|+-........-|.+|. ++-. .|.. ..++.....+.++-+-..
T Consensus 120 ~~ia-Gpc~iE~~~~~~~~A~~lk~~g~~~~r~~~~kpRtsp~~f~------g~~~-e~l~~L~~~~~~~Gl~~~t~v~d 191 (360)
T PRK12595 120 SFIF-GPCSVESYEQVEAVAKALKAKGLKLLRGGAFKPRTSPYDFQ------GLGV-EGLKILKQVADEYGLAVISEIVN 191 (360)
T ss_pred eeEE-ecccccCHHHHHHHHHHHHHcCCcEEEccccCCCCCCcccc------CCCH-HHHHHHHHHHHHcCCCEEEeeCC
Confidence 3344 55444567888999999988888876643321111111111 1111 1111 223444455555666666
Q ss_pred chhHHHHHhcCCcEEeccCC-CchhHHHHHHhhhhceEEEeeccCCCCcCc-cCHHHHHHHHHHHhC
Q 048238 274 WNSALESICAGVPILAWPIM-ADQPLNARMVTEEIKVALRVETCDGSVRGF-VKWQGLEKTVRELMG 338 (395)
Q Consensus 274 ~~s~~Ea~~~GvP~i~~P~~-~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~-~~~~~l~~~i~~~l~ 338 (395)
..++-++..+ ++++-+|-+ ..|+.-...+.+. |.=+.+.+ +. .+.+++..++..+.+
T Consensus 192 ~~~~~~l~~~-vd~lkI~s~~~~n~~LL~~~a~~-gkPVilk~------G~~~t~~e~~~Ave~i~~ 250 (360)
T PRK12595 192 PADVEVALDY-VDVIQIGARNMQNFELLKAAGRV-NKPVLLKR------GLSATIEEFIYAAEYIMS 250 (360)
T ss_pred HHHHHHHHHh-CCeEEECcccccCHHHHHHHHcc-CCcEEEeC------CCCCCHHHHHHHHHHHHH
Confidence 6666677677 888888864 3445555666555 88888886 54 699999999988874
No 245
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=30.25 E-value=43 Score=26.92 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=23.0
Q ss_pred HHHHHHHH--hcCCCccEEEECCchh-hHHHHHH-HcCCCcEEEec
Q 048238 15 QPHFERAL--ESLPHVSFMVSDGFLW-WTLDSAN-KFGFPRFVFYG 56 (395)
Q Consensus 15 ~~~l~~~l--~~~~kpD~vI~D~~~~-~~~~~A~-~lgIP~i~~~~ 56 (395)
...+.+++ ++. +||+|.+..... +...+++ ..++|++....
T Consensus 60 ~~~~~~~l~~~~~-~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h 104 (160)
T PF13579_consen 60 LRRLRRLLAARRE-RPDVVHAHSPTAGLVAALARRRRGIPLVVTVH 104 (160)
T ss_dssp HHHHHHHCHHCT----SEEEEEHHHHHHHHHHHHHHHT--EEEE-S
T ss_pred HHHHHHHHhhhcc-CCeEEEecccchhHHHHHHHHccCCcEEEEEC
Confidence 34556666 666 999999887543 3334555 88999987754
No 246
>PF01497 Peripla_BP_2: Periplasmic binding protein; InterPro: IPR002491 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Most bacterial importers employ a periplasmic substrate-binding protein (PBP) that delivers the ligand to the extracellular gate of the TM domains. These proteins bind their substrates selectively and with high affinity, which is thought to ensure the specificity of the transport reaction. Binding proteins in Gram-negative bacteria are present within the periplasm, whereas those in Gram-positive bacteria are tethered to the cell membrane via the acylation of a cysteine residue that is an integral component of a lipoprotein signal sequence. In planta expression of a high-affinity iron-uptake system involving the siderophore chrysobactin in Erwinia chrysanthemi 3937 contributes greatly to invasive growth of this pathogen on its natural host, African violets []. The cobalamin (vitamin B12) and the iron transport systems share many common attributes and probably evolved from the same origin [, ]. The periplasmic-binding domain is composed of two subdomains, each consisting of a central beta-sheet and surrounding alpha-helices, linked by a rigid alpha-helix. The substrate binding site is located in a cleft between the two alpha/beta subdomains [].; GO: 0005488 binding; PDB: 2X4L_A 1N4A_B 1N2Z_B 1N4D_B 4DBL_J 2QI9_F 3EIW_A 3EIX_A 3MWG_A 3MWF_A ....
Probab=30.19 E-value=65 Score=28.52 Aligned_cols=40 Identities=18% Similarity=0.334 Sum_probs=26.6
Q ss_pred HHHHHHhcCCCccEEEECCch--hhHHHHHHHcCCCcEEEecch
Q 048238 17 HFERALESLPHVSFMVSDGFL--WWTLDSANKFGFPRFVFYGMN 58 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D~~~--~~~~~~A~~lgIP~i~~~~~~ 58 (395)
.++. |... +||+||..... .-...-....+||++.+....
T Consensus 52 ~~E~-i~~l-~PDlIi~~~~~~~~~~~~~~~~~~ip~~~~~~~~ 93 (238)
T PF01497_consen 52 NLEA-ILAL-KPDLIIGSSFYGQSEEIEKLLEAGIPVVVFDSSS 93 (238)
T ss_dssp -HHH-HHHT---SEEEEETTSSCHHHHHHHHHTTSEEEEESSTT
T ss_pred cHHH-HHhC-CCCEEEEeccccchHHHHHHhcccceEEEeeccc
Confidence 4444 4445 89999988866 344555678899999997765
No 247
>PRK13243 glyoxylate reductase; Reviewed
Probab=30.03 E-value=2e+02 Score=27.43 Aligned_cols=67 Identities=15% Similarity=0.242 Sum_probs=42.3
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+..|.+|.++ ..+++.+...|.+++ .+.... ...... ..++ .+....++++.+|+ ++.
T Consensus 150 gktvgIiG~G~IG-------~~vA~~l~~~G~~V~-~~d~~~---~~~~~~---~~~~---~~~~l~ell~~aDi--V~l 210 (333)
T PRK13243 150 GKTIGIIGFGRIG-------QAVARRAKGFGMRIL-YYSRTR---KPEAEK---ELGA---EYRPLEELLRESDF--VSL 210 (333)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEE-EECCCC---ChhhHH---HcCC---EecCHHHHHhhCCE--EEE
Confidence 5789999999998 566777777788764 443321 111110 0122 34567789999999 998
Q ss_pred cCCchh
Q 048238 271 HCGWNS 276 (395)
Q Consensus 271 hgG~~s 276 (395)
|.-.+.
T Consensus 211 ~lP~t~ 216 (333)
T PRK13243 211 HVPLTK 216 (333)
T ss_pred eCCCCh
Confidence 886543
No 248
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=29.29 E-value=1.8e+02 Score=26.73 Aligned_cols=43 Identities=7% Similarity=-0.071 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCCccEEEECCchh--hHHHHHHHcCCCcEEEecch
Q 048238 15 QPHFERALESLPHVSFMVSDGFLW--WTLDSANKFGFPRFVFYGMN 58 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~--~~~~~A~~lgIP~i~~~~~~ 58 (395)
...+.+.+++. +..+|+++.... .+-.+|+..|+|.+.+.+..
T Consensus 206 l~~l~~~ik~~-~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 206 LKRLIDLAKEK-GVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHHc-CCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 45566677777 999999998666 56679999999998887654
No 249
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=29.24 E-value=78 Score=29.46 Aligned_cols=29 Identities=17% Similarity=0.227 Sum_probs=23.3
Q ss_pred ccCccceeecCCchhHHHHHh---cCCcEEeccC
Q 048238 262 HESVQGFLSHCGWNSALESIC---AGVPILAWPI 292 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~---~GvP~i~~P~ 292 (395)
..++ +|+-||=||+.+++. .++|++.+|.
T Consensus 57 ~~d~--vi~iGGDGTlL~a~~~~~~~~pi~gIn~ 88 (277)
T PRK03708 57 DVDF--IIAIGGDGTILRIEHKTKKDIPILGINM 88 (277)
T ss_pred CCCE--EEEEeCcHHHHHHHHhcCCCCeEEEEeC
Confidence 4566 999999999999874 4568888865
No 250
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=29.08 E-value=1.2e+02 Score=28.14 Aligned_cols=76 Identities=11% Similarity=0.252 Sum_probs=50.2
Q ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHh
Q 048238 203 AEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESIC 282 (395)
Q Consensus 203 ~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~ 282 (395)
+..+.+..++|.+++.+.+.+.||.+.+.+. -..+.++++...+-+++.. ||=.+..++++-+++
T Consensus 44 a~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~g-------------a~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~~l~ 108 (282)
T cd07025 44 AGTDEERAADLNAAFADPEIKAIWCARGGYG-------------ANRLLPYLDYDLIRANPKI--FVGYSDITALHLALY 108 (282)
T ss_pred CCCHHHHHHHHHHHhhCCCCCEEEEcCCcCC-------------HHHhhhhCCHHHHhhCCeE--EEEecHHHHHHHHHH
Confidence 3445678889999999999999999876411 1223344444555566655 777777777777765
Q ss_pred c--CCcEEeccCC
Q 048238 283 A--GVPILAWPIM 293 (395)
Q Consensus 283 ~--GvP~i~~P~~ 293 (395)
. |++.+.-|..
T Consensus 109 ~~~g~~t~hGp~~ 121 (282)
T cd07025 109 AKTGLVTFHGPML 121 (282)
T ss_pred HhcCceEEECccc
Confidence 3 6777666653
No 251
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=28.95 E-value=3.4e+02 Score=25.66 Aligned_cols=66 Identities=11% Similarity=0.071 Sum_probs=39.9
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeE-EecCCCHHHHhcccCcccee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLV-VRDWVNQKEILWHESVQGFL 269 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pq~~ll~~~~~~~~I 269 (395)
.+.+.+|.+|+++ +++++.+...|.+++..-... ... .++. +.......++++.+|+ ++
T Consensus 136 g~tvgIvG~G~IG-------~~vA~~l~afG~~V~~~~~~~-~~~----------~~~~~~~~~~~l~e~l~~aDv--vv 195 (312)
T PRK15469 136 DFTIGILGAGVLG-------SKVAQSLQTWGFPLRCWSRSR-KSW----------PGVQSFAGREELSAFLSQTRV--LI 195 (312)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEEeCCC-CCC----------CCceeecccccHHHHHhcCCE--EE
Confidence 3678899999998 456677777788765332211 000 1111 1122345678999999 88
Q ss_pred ecCCchh
Q 048238 270 SHCGWNS 276 (395)
Q Consensus 270 thgG~~s 276 (395)
.|+-.+.
T Consensus 196 ~~lPlt~ 202 (312)
T PRK15469 196 NLLPNTP 202 (312)
T ss_pred ECCCCCH
Confidence 8875443
No 252
>PRK00257 erythronate-4-phosphate dehydrogenase; Validated
Probab=28.89 E-value=2.8e+02 Score=27.22 Aligned_cols=63 Identities=17% Similarity=0.099 Sum_probs=35.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+-.|.+|.++ ..+++.+...|.+++.. ....... ..+ ..+.+..++++.+|+ ++.
T Consensus 116 gktvGIIG~G~IG-------~~va~~l~a~G~~V~~~-Dp~~~~~---------~~~---~~~~~l~ell~~aDi--V~l 173 (381)
T PRK00257 116 ERTYGVVGAGHVG-------GRLVRVLRGLGWKVLVC-DPPRQEA---------EGD---GDFVSLERILEECDV--ISL 173 (381)
T ss_pred cCEEEEECCCHHH-------HHHHHHHHHCCCEEEEE-CCccccc---------ccC---ccccCHHHHHhhCCE--EEE
Confidence 3556677777776 44555566667776433 2210000 001 235566778888888 777
Q ss_pred cCCch
Q 048238 271 HCGWN 275 (395)
Q Consensus 271 hgG~~ 275 (395)
|.-.+
T Consensus 174 h~Plt 178 (381)
T PRK00257 174 HTPLT 178 (381)
T ss_pred eCcCC
Confidence 77543
No 253
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=28.77 E-value=66 Score=29.44 Aligned_cols=41 Identities=17% Similarity=0.111 Sum_probs=27.3
Q ss_pred HHHHHHHhcCCCccEEEE----------CCchhh---HHHHHHHcCCCcEEEecc
Q 048238 16 PHFERALESLPHVSFMVS----------DGFLWW---TLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~----------D~~~~~---~~~~A~~lgIP~i~~~~~ 57 (395)
-.+..++++. +||+||+ |.+++. ++.=|..+|||.|.++-.
T Consensus 73 lal~~l~~~~-~pDLVvSGIN~G~Nlg~dv~ySGTVaaA~Ea~~~GipsIA~S~~ 126 (252)
T COG0496 73 LGLNELLKEP-RPDLVVSGINAGANLGDDVIYSGTVAAAMEAALLGIPAIAISLA 126 (252)
T ss_pred HHHHHhccCC-CCCEEEeCccCCCccccceeeeehHHHHHHHHHcCccceeeeeh
Confidence 3456666666 7999996 344443 333446789999988765
No 254
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=28.22 E-value=1.1e+02 Score=22.65 Aligned_cols=36 Identities=6% Similarity=0.027 Sum_probs=26.4
Q ss_pred HHHHHHHhcCCCccEEEECCc---------hhhHHHHHHHcCCCcE
Q 048238 16 PHFERALESLPHVSFMVSDGF---------LWWTLDSANKFGFPRF 52 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~---------~~~~~~~A~~lgIP~i 52 (395)
+.+.+++++. ++|+||..+. ......+|...+||++
T Consensus 45 ~~i~~~i~~g-~id~VIn~~~~~~~~~~~d~~~iRr~A~~~~Ip~~ 89 (90)
T smart00851 45 LAILDLIKNG-EIDLVINTLYPLGAQPHEDGKALRRAAENIDIPGA 89 (90)
T ss_pred HHHHHHhcCC-CeEEEEECCCcCcceeccCcHHHHHHHHHcCCCee
Confidence 4577788887 9999998653 1244557888899976
No 255
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=28.12 E-value=2.9e+02 Score=25.89 Aligned_cols=91 Identities=15% Similarity=0.026 Sum_probs=50.5
Q ss_pred chHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCC-
Q 048238 177 KPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVN- 255 (395)
Q Consensus 177 ~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 255 (395)
-.++.+..... +-+++-+-........+...+..+.++.++.|..+++=+|... .+.+ .......|
T Consensus 115 ~~E~er~v~~~--gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~--~~~~---------~~~~~~~p~ 181 (293)
T COG2159 115 AEELERRVREL--GFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGP--GGAG---------LEKGHSDPL 181 (293)
T ss_pred HHHHHHHHHhc--CceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCC--CCcc---------cccCCCCch
Confidence 34566666553 2222222222222334556678899999999999998776531 1000 00000122
Q ss_pred --HHHHhcccCccceeecCC--chhHHHH
Q 048238 256 --QKEILWHESVQGFLSHCG--WNSALES 280 (395)
Q Consensus 256 --q~~ll~~~~~~~~IthgG--~~s~~Ea 280 (395)
..-....|+++.++.|+| ..=..|+
T Consensus 182 ~~~~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 182 YLDDVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHHHHHHHCCCCcEEEEecCCCCchhHHH
Confidence 233556789999999999 5444444
No 256
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.06 E-value=3.1e+02 Score=23.38 Aligned_cols=96 Identities=18% Similarity=0.129 Sum_probs=60.1
Q ss_pred CHHH-HhcccCccceeecCC---chhHHHHHhcCCcEEeccCC-CchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHH
Q 048238 255 NQKE-ILWHESVQGFLSHCG---WNSALESICAGVPILAWPIM-ADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGL 329 (395)
Q Consensus 255 pq~~-ll~~~~~~~~IthgG---~~s~~Ea~~~GvP~i~~P~~-~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l 329 (395)
+|.. |-+||++..-+--.| ..|+.|-..+|.=-+.---+ -=+..|+.+..+- |.=..+-. ...+.++|
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~rF-gfPfI~aV------kg~~k~~I 136 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVERF-GFPFIIAV------KGNTKDTI 136 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHhc-CCceEEee------cCCCHHHH
Confidence 3555 445888733332222 35777777777544321000 1145799999544 98777765 46689999
Q ss_pred HHHHHHHhCCChhHHHHHHHHHHHHHHH
Q 048238 330 EKTVRELMGGEKGEKARTKVKELSEIAR 357 (395)
Q Consensus 330 ~~~i~~~l~~~~~~~~~~~a~~l~~~~~ 357 (395)
..+..+-|.|.+...++..+.++.++.+
T Consensus 137 l~a~~~Rl~n~~e~E~~tAl~eI~rIA~ 164 (176)
T COG3195 137 LAAFERRLDNDREQEFATALAEIERIAL 164 (176)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999888888755567777776666654
No 257
>cd06330 PBP1_Arsenic_SBP_like Periplasmic solute-binding domain of active transport proteins. Periplasmic solute-binding domain of active transport proteins found in bacteria and Archaea that is predicted to be involved in the efflux of toxic compounds. Members of this subgroup include proteins from Herminiimonas arsenicoxydans, which is resistant to arsenic and various heavy metals such as cadmium and zinc. Moreover, they show significant sequence similarity to the cluster of AmiC and active transport systems for short-chain amides and urea (FmdDEF), and thus are likely to exhibit a ligand-binding mode similar to that of the amide sensor protein AmiC from Pseudomonas aeruginosa.
Probab=27.74 E-value=5.1e+02 Score=24.22 Aligned_cols=12 Identities=17% Similarity=0.003 Sum_probs=6.2
Q ss_pred CchHHHHHhhhc
Q 048238 176 SKPAWIRWLDRK 187 (395)
Q Consensus 176 ~~~~l~~~l~~~ 187 (395)
....+.+.+...
T Consensus 184 ~~~~v~~i~~~~ 195 (346)
T cd06330 184 YGSEITALLAAK 195 (346)
T ss_pred cHHHHHHHHhcC
Confidence 445555655443
No 258
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=27.41 E-value=1.8e+02 Score=30.02 Aligned_cols=82 Identities=12% Similarity=0.099 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHh-cCCCeEEecCCC-HH-----HHh--cccCccceeecCCc----
Q 048238 208 QQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERV-KGRGLVVRDWVN-QK-----EIL--WHESVQGFLSHCGW---- 274 (395)
Q Consensus 208 ~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p-q~-----~ll--~~~~~~~~IthgG~---- 274 (395)
..-+.+++.|++.|.+.++.+.+.. ...+.+.. ...++.+..-.. +. +-+ ..-..+.+++|.|-
T Consensus 10 ~~a~~l~~~L~~~GV~~vFgvpG~~---~~~l~~~l~~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~GpG~~N 86 (568)
T PRK07449 10 LWAAVILEELTRLGVRHVVIAPGSR---STPLTLAAAEHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTSGTAVAN 86 (568)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCc---cHHHHHHHHhCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECCccHHHh
Confidence 3445577777777777777665531 11121111 122332222111 11 111 11123347777774
Q ss_pred --hhHHHHHhcCCcEEeccC
Q 048238 275 --NSALESICAGVPILAWPI 292 (395)
Q Consensus 275 --~s~~Ea~~~GvP~i~~P~ 292 (395)
+.++||...++|||++.-
T Consensus 87 ~l~~i~~A~~~~~Pvl~IsG 106 (568)
T PRK07449 87 LYPAVIEAGLTGVPLIVLTA 106 (568)
T ss_pred hhHHHHHHhhcCCcEEEEEC
Confidence 588999999999999853
No 259
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=27.37 E-value=4.5e+02 Score=23.75 Aligned_cols=45 Identities=7% Similarity=0.122 Sum_probs=30.5
Q ss_pred HHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEE
Q 048238 179 AWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWV 227 (395)
Q Consensus 179 ~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~ 227 (395)
.+.+|+.. .+.++||-.-|........+....+++++.|+.+...
T Consensus 23 ~~~~~~~~----~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l 67 (233)
T PRK05282 23 LIAELLAG----RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGI 67 (233)
T ss_pred HHHHHHcC----CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEe
Confidence 34445543 3678898877765434566778888998888875544
No 260
>PRK14478 nitrogenase molybdenum-cofactor biosynthesis protein NifE; Provisional
Probab=26.98 E-value=72 Score=32.26 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=27.6
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRF 52 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i 52 (395)
...+.+.+++. +||++|.. .....+|+++|||++
T Consensus 382 ~~e~~~~i~~~-~pDliig~---s~~~~~a~k~giP~~ 415 (475)
T PRK14478 382 PRELYKMLKEA-KADIMLSG---GRSQFIALKAGMPWL 415 (475)
T ss_pred HHHHHHHHhhc-CCCEEEec---CchhhhhhhcCCCEE
Confidence 45667778887 99999987 466679999999988
No 261
>PRK07574 formate dehydrogenase; Provisional
Probab=26.93 E-value=2.4e+02 Score=27.73 Aligned_cols=71 Identities=20% Similarity=0.247 Sum_probs=42.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
.+.+..|.+|.++ +.+++.+...|.+++. +... ..+..... ..++ ..+....++++.+|+ ++.
T Consensus 192 gktVGIvG~G~IG-------~~vA~~l~~fG~~V~~-~dr~--~~~~~~~~---~~g~--~~~~~l~ell~~aDv--V~l 254 (385)
T PRK07574 192 GMTVGIVGAGRIG-------LAVLRRLKPFDVKLHY-TDRH--RLPEEVEQ---ELGL--TYHVSFDSLVSVCDV--VTI 254 (385)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCCCEEEE-ECCC--CCchhhHh---hcCc--eecCCHHHHhhcCCE--EEE
Confidence 4568888999987 4566667677887653 3321 11111111 1122 123457789999999 999
Q ss_pred cCCchhHH
Q 048238 271 HCGWNSAL 278 (395)
Q Consensus 271 hgG~~s~~ 278 (395)
|+-.+.-.
T Consensus 255 ~lPlt~~T 262 (385)
T PRK07574 255 HCPLHPET 262 (385)
T ss_pred cCCCCHHH
Confidence 98655433
No 262
>PLN02293 adenine phosphoribosyltransferase
Probab=26.79 E-value=1.7e+02 Score=25.39 Aligned_cols=42 Identities=12% Similarity=-0.016 Sum_probs=28.3
Q ss_pred HhcHHHHHHHHhcCCCccEEEECC--chhhHHHHHHHcCCCcEEE
Q 048238 12 KLMQPHFERALESLPHVSFMVSDG--FLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~--~~~~~~~~A~~lgIP~i~~ 54 (395)
+.+.+.+.+.+++. ++|+|++=. -..++..+|..+|+|++..
T Consensus 48 ~~~~~~l~~~~~~~-~~d~Ivg~e~~Gi~lA~~lA~~Lg~p~v~~ 91 (187)
T PLN02293 48 KDTIDLFVERYRDM-GISVVAGIEARGFIFGPPIALAIGAKFVPL 91 (187)
T ss_pred HHHHHHHHHHHhhc-CCCEEEEeCCCchHHHHHHHHHHCCCEEEE
Confidence 44455555666666 789887642 2337777899999997744
No 263
>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP). CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.
Probab=26.74 E-value=1.3e+02 Score=23.21 Aligned_cols=38 Identities=11% Similarity=0.236 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCccEEEECCc-------hhhHHHHHHHcCCCcEE
Q 048238 15 QPHFERALESLPHVSFMVSDGF-------LWWTLDSANKFGFPRFV 53 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~-------~~~~~~~A~~lgIP~i~ 53 (395)
.+.+.+.+++- ++|+||.-+- .+.....|-.+|||++.
T Consensus 56 ~~~i~~~i~~~-~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T 100 (110)
T cd01424 56 RPNIVDLIKNG-EIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT 100 (110)
T ss_pred chhHHHHHHcC-CeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence 36788888887 9999998542 24666789999999983
No 264
>PLN02928 oxidoreductase family protein
Probab=26.58 E-value=3e+02 Score=26.51 Aligned_cols=76 Identities=22% Similarity=0.250 Sum_probs=41.4
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHH-HHhcCCCeE--EecCCCHHHHhcccCccc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFE-ERVKGRGLV--VRDWVNQKEILWHESVQG 267 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~pq~~ll~~~~~~~ 267 (395)
.+.+..|.+|.++ +.+++.+...|.+++..-..........+. .......+. ...+....++|+.+|+
T Consensus 159 gktvGIiG~G~IG-------~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDi-- 229 (347)
T PLN02928 159 GKTVFILGYGAIG-------IELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADI-- 229 (347)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCE--
Confidence 4678899999998 456666777788875432210000000000 000000000 1145567789999999
Q ss_pred eeecCCch
Q 048238 268 FLSHCGWN 275 (395)
Q Consensus 268 ~IthgG~~ 275 (395)
++.|+-.+
T Consensus 230 Vvl~lPlt 237 (347)
T PLN02928 230 VVLCCTLT 237 (347)
T ss_pred EEECCCCC
Confidence 99998543
No 265
>PF01995 DUF128: Domain of unknown function DUF128; InterPro: IPR002846 These archaebacterial proteins have no known function. The domain is found duplicated in some sequences.; PDB: 3NEK_B.
Probab=26.16 E-value=2.3e+02 Score=25.77 Aligned_cols=81 Identities=20% Similarity=0.292 Sum_probs=49.5
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
..+.|+.++=.+.....+.+.++++.+++.+...+..+|.+...+ -|+.+. ..-..++.
T Consensus 144 G~G~ilAn~ReiP~~a~e~~~~il~~l~~~g~~Gil~iG~p~~~v----------lgvpv~-----------~~~~Giv~ 202 (236)
T PF01995_consen 144 GEGKILANFREIPMSAREKAEEILEKLEKAGFSGILEIGEPNEPV----------LGVPVE-----------PGMVGIVV 202 (236)
T ss_dssp SSSEEEEEEEEEETTTHHHHHHHHHHH---T-TTEEEE--TT--B----------TTB--------------TTEEEEEE
T ss_pred CCceEeeeeecCchhHHHHHHHHHHHhhhcccceeEEeCCCCCcc----------cCCccC-----------CCeEEEEE
Confidence 467888888888777889999999999999999888888641111 122221 12233777
Q ss_pred cCCchhHHHHHhcCCcEEeccC
Q 048238 271 HCGWNSALESICAGVPILAWPI 292 (395)
Q Consensus 271 hgG~~s~~Ea~~~GvP~i~~P~ 292 (395)
-||.|-++-+..+|+|+-.-+.
T Consensus 203 ~GG~Npia~~~E~Gi~i~~~~~ 224 (236)
T PF01995_consen 203 IGGLNPIAAAVEAGIPIEIKAM 224 (236)
T ss_dssp E-TTHHHHHHHHTT---EEEEE
T ss_pred EecCcHHHHHHHcCCeeEeeeh
Confidence 7999999999999999866553
No 266
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=25.98 E-value=2.3e+02 Score=24.16 Aligned_cols=44 Identities=9% Similarity=-0.062 Sum_probs=28.1
Q ss_pred HHhcHHHHHHHHhcCCCccEEEECCchh--hHHHHHHHc------CCCcEEEec
Q 048238 11 TKLMQPHFERALESLPHVSFMVSDGFLW--WTLDSANKF------GFPRFVFYG 56 (395)
Q Consensus 11 ~~~~~~~l~~~l~~~~kpD~vI~D~~~~--~~~~~A~~l------gIP~i~~~~ 56 (395)
+......+.-+++ . +||+||+..-.. ....+|..+ |.+.|..=+
T Consensus 78 l~~~~~~~~il~r-~-rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES 129 (170)
T PF08660_consen 78 LRAFLQSLRILRR-E-RPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIES 129 (170)
T ss_pred HHHHHHHHHHHHH-h-CCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEe
Confidence 3333444443433 3 899999997444 455577888 888887744
No 267
>PRK06270 homoserine dehydrogenase; Provisional
Probab=25.63 E-value=6e+02 Score=24.31 Aligned_cols=59 Identities=12% Similarity=0.180 Sum_probs=34.0
Q ss_pred CHHHHhcccCccceee------cCC---chhHHHHHhcCCcEEe---ccCCCchhHHHHHHhhhhceEEEee
Q 048238 255 NQKEILWHESVQGFLS------HCG---WNSALESICAGVPILA---WPIMADQPLNARMVTEEIKVALRVE 314 (395)
Q Consensus 255 pq~~ll~~~~~~~~It------hgG---~~s~~Ea~~~GvP~i~---~P~~~DQ~~na~~v~~~lg~g~~~~ 314 (395)
...+++.+++...+|- |+| ..-+.+++.+|+++|+ -|+...-..-.+...+. |+.+...
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~~-g~~~~~e 150 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKKN-GVRFRYE 150 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHHc-CCEEEEe
Confidence 4566776554433555 443 4456899999999999 57743222222233344 6666543
No 268
>PRK08322 acetolactate synthase; Reviewed
Probab=25.45 E-value=1.5e+02 Score=30.39 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=21.8
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.|- +++.||...++|+|++.
T Consensus 64 ~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 64 AGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 4448888773 48889999999999885
No 269
>PRK14571 D-alanyl-alanine synthetase A; Provisional
Probab=25.43 E-value=2.9e+02 Score=25.71 Aligned_cols=34 Identities=15% Similarity=0.139 Sum_probs=25.0
Q ss_pred eEEEeccccc---CCHHHHHHHHHHHHhCCCcEEEEE
Q 048238 195 MYVAFGSQAE---ISAQQLKEIATGLEQSKVNFLWVI 228 (395)
Q Consensus 195 v~vs~Gs~~~---~~~~~~~~l~~~l~~~~~~~i~~~ 228 (395)
|.|-||..+. .+......++++|++.++++...-
T Consensus 3 v~v~~gg~s~e~~~sl~s~~~i~~al~~~g~~~~~i~ 39 (299)
T PRK14571 3 VALLMGGVSREREISLRSGERVKKALEKLGYEVTVFD 39 (299)
T ss_pred EEEEeCCCCCCccchHHHHHHHHHHHHHcCCeEEEEc
Confidence 5566777654 345667889999999999977664
No 270
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=25.23 E-value=94 Score=32.29 Aligned_cols=94 Identities=15% Similarity=0.160 Sum_probs=48.0
Q ss_pred CHHHHhcccCccceeecC-Cc-hhHHHHHhcCCcEEeccCCC-chhHHHH--HHhhhhceEEEeeccCCCCcCccCHHHH
Q 048238 255 NQKEILWHESVQGFLSHC-GW-NSALESICAGVPILAWPIMA-DQPLNAR--MVTEEIKVALRVETCDGSVRGFVKWQGL 329 (395)
Q Consensus 255 pq~~ll~~~~~~~~Ithg-G~-~s~~Ea~~~GvP~i~~P~~~-DQ~~na~--~v~~~lg~g~~~~~~~~~~~~~~~~~~l 329 (395)
+..+++.-++++.|-+-= =| -|-+||++.|||.|..=+.+ -++.+-. .-... |+-+.-+ ...+.++.
T Consensus 462 ~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~-GV~VvdR-------~~~n~~e~ 533 (633)
T PF05693_consen 462 DYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEY-GVYVVDR-------RDKNYDES 533 (633)
T ss_dssp -HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGG-TEEEE-S-------SSS-HHHH
T ss_pred CHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCC-cEEEEeC-------CCCCHHHH
Confidence 344555555554443310 02 28899999999999887732 2222211 11134 6666544 35566666
Q ss_pred HHHHHHHhC-----CC-hhHHHHHHHHHHHHHH
Q 048238 330 EKTVRELMG-----GE-KGEKARTKVKELSEIA 356 (395)
Q Consensus 330 ~~~i~~~l~-----~~-~~~~~~~~a~~l~~~~ 356 (395)
.+.+.+.|. +. +....|.+++++++++
T Consensus 534 v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 534 VNQLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 666666652 21 2345777777776665
No 271
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=25.18 E-value=7.3e+02 Score=25.16 Aligned_cols=141 Identities=13% Similarity=0.151 Sum_probs=78.6
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCcc--chhHHHHhcCCCeEEecCC-------CHHHHhc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESEL--GDGFEERVKGRGLVVRDWV-------NQKEILW 261 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------pq~~ll~ 261 (395)
.+.+++.-.||+... ....+++.|.+.|+.+-.+.......+ +..+ +......++..-|. .+.++..
T Consensus 70 ~k~IllgVtGsIAay---ka~~lvr~L~k~G~~V~VvmT~sA~~fv~p~~~-~~ls~~~V~~d~~~~~~~~~~~Hi~la~ 145 (475)
T PRK13982 70 SKRVTLIIGGGIAAY---KALDLIRRLKERGAHVRCVLTKAAQQFVTPLTA-SALSGQRVYTDLFDPESEFDAGHIRLAR 145 (475)
T ss_pred CCEEEEEEccHHHHH---HHHHHHHHHHhCcCEEEEEECcCHHHHhhHHHH-HHhcCCceEecCCCcccccCccchhhhh
Confidence 356777777887643 444566666777887766655532221 1112 12223334432222 2445544
Q ss_pred ccCccceeecCCchhHHH-------------HHhcCCcEEeccCCCc----hh---HHHHHHhhhhceEEEeecc-----
Q 048238 262 HESVQGFLSHCGWNSALE-------------SICAGVPILAWPIMAD----QP---LNARMVTEEIKVALRVETC----- 316 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~E-------------a~~~GvP~i~~P~~~D----Q~---~na~~v~~~lg~g~~~~~~----- 316 (395)
.+|+ .+|.-|-+|++.- .+..++|+++.|-... ++ .|...+.+. |+-+.-...
T Consensus 146 ~aD~-~vVAPATANTIAKiA~GiADnLlt~v~La~~~PvliaPaMN~~M~~npat~~Nl~~L~~~-G~~vi~P~~g~lA~ 223 (475)
T PRK13982 146 DCDL-IVVAPATADLMAKMANGLADDLASAILLAANRPILLAPAMNPLMWNNPATRRNVAQLKRD-GVHMIGPNAGEMAE 223 (475)
T ss_pred hcCE-EEEeeCCHHHHHHHHccccCcHHHHHHHhcCCCEEEEEcCCHHHhcCHHHHHHHHHHHHC-CCEEECCCCCcccc
Confidence 5554 4666776665543 3667999999998543 33 577888666 876643221
Q ss_pred --CCCCcCccCHHHHHHHHHHHh
Q 048238 317 --DGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 317 --~~~~~~~~~~~~l~~~i~~~l 337 (395)
+.+...-..+++|...+.+++
T Consensus 224 ~g~~G~Grm~e~~~I~~~v~~~~ 246 (475)
T PRK13982 224 RGEAGVGRMAEPLEIAAAAEALL 246 (475)
T ss_pred CCCcCCCCCCCHHHHHHHHHHHH
Confidence 001122356677888887666
No 272
>KOG1344 consensus Predicted histone deacetylase [Chromatin structure and dynamics]
Probab=24.91 E-value=2.1e+02 Score=25.80 Aligned_cols=47 Identities=9% Similarity=0.140 Sum_probs=33.5
Q ss_pred HhcHHHHHHHHhcCCCccEEEECCchh----------------------hHHHHHHHcCCCcEEEecchH
Q 048238 12 KLMQPHFERALESLPHVSFMVSDGFLW----------------------WTLDSANKFGFPRFVFYGMNN 59 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~~~~----------------------~~~~~A~~lgIP~i~~~~~~~ 59 (395)
+.....+...++++ +||+||+..-+- -....++.+|||.+.+.+...
T Consensus 234 rkl~r~l~~sl~ef-~Pd~VvYNAGTDiLeGDpLG~L~ISp~Gi~~RDelVFr~~R~~~iPvvMltSGGY 302 (324)
T KOG1344|consen 234 RKLKRCLMQSLAEF-RPDMVVYNAGTDILEGDPLGNLAISPEGIIERDELVFRTFRALGIPVVMLTSGGY 302 (324)
T ss_pred HHHHHHHHHHHHhh-CCcEEEEeCCCccccCCCCCCeeecccccchhhHHHHHHHHHcCCcEEEEecCce
Confidence 56677788888898 999999864321 123457788899888866543
No 273
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=24.69 E-value=5.9e+02 Score=25.20 Aligned_cols=26 Identities=19% Similarity=0.403 Sum_probs=21.0
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEec
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAW 290 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~ 290 (395)
.+++++|+|- +.+.||...++|+|++
T Consensus 64 ~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 64 PVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3448888774 4788999999999998
No 274
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=24.49 E-value=1.3e+02 Score=25.66 Aligned_cols=47 Identities=17% Similarity=0.357 Sum_probs=28.2
Q ss_pred hcCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHH
Q 048238 282 CAGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 282 ~~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
..|+|---+=||-|+..|...+.+ +|+--..-+ ..++.+.+.+.+++
T Consensus 119 ~tgI~y~eMlFFDDe~~N~~~v~~-lGV~~v~v~------~Glt~~~~~~gL~~ 165 (169)
T PF12689_consen 119 KTGIPYEEMLFFDDESRNIEVVSK-LGVTCVLVP------DGLTWDEFERGLEK 165 (169)
T ss_dssp HH---GGGEEEEES-HHHHHHHHT-TT-EEEE-S------SS--HHHHHHHHHH
T ss_pred hcCCChhHEEEecCchhcceeeEe-cCcEEEEeC------CCCCHHHHHHHHHH
Confidence 356765555567899999988744 598877775 57888888887754
No 275
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=24.46 E-value=1.1e+02 Score=27.08 Aligned_cols=42 Identities=19% Similarity=0.173 Sum_probs=26.6
Q ss_pred HHHHHHHHhcC-CCccEEEECCchh-------hHHHHHHHcCCCcEEEec
Q 048238 15 QPHFERALESL-PHVSFMVSDGFLW-------WTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 15 ~~~l~~~l~~~-~kpD~vI~D~~~~-------~~~~~A~~lgIP~i~~~~ 56 (395)
.|.+.+++++. .+||+|++|..-. .+..++-.+++|+|...=
T Consensus 76 ~P~~l~~l~~l~~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGVAK 125 (206)
T PF04493_consen 76 LPCILEALEKLKNKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGVAK 125 (206)
T ss_dssp HHHHHHHHHTSSS--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEEES
T ss_pred HHHHHHHHHHhcccCCEEEEeCceeecCCCcChhheeeeccCCCEEEEeC
Confidence 46777788776 5899999996322 344466778899987743
No 276
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=24.40 E-value=3e+02 Score=27.16 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=40.0
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+-.|.+|.++ +.+++.+...|.+++..-... ... ..++ .......++|+.+|+ ++.
T Consensus 151 gktvGIiG~G~IG-------~~vA~~~~~fGm~V~~~d~~~--~~~--------~~~~--~~~~~l~ell~~sDi--Vsl 209 (409)
T PRK11790 151 GKTLGIVGYGHIG-------TQLSVLAESLGMRVYFYDIED--KLP--------LGNA--RQVGSLEELLAQSDV--VSL 209 (409)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCc--ccc--------cCCc--eecCCHHHHHhhCCE--EEE
Confidence 4678899999997 456666777788865432210 000 0111 122357889999999 999
Q ss_pred cCCch
Q 048238 271 HCGWN 275 (395)
Q Consensus 271 hgG~~ 275 (395)
|+-.+
T Consensus 210 h~Plt 214 (409)
T PRK11790 210 HVPET 214 (409)
T ss_pred cCCCC
Confidence 98543
No 277
>PF09547 Spore_IV_A: Stage IV sporulation protein A (spore_IV_A); InterPro: IPR014201 This entry is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis []. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.
Probab=24.25 E-value=4.7e+02 Score=26.23 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=55.1
Q ss_pred HhcccCccceeecCCch--------------hHHHHHhcCCcEEec-----cCCCchhHHHHHHhhhhceEEEeeccCCC
Q 048238 259 ILWHESVQGFLSHCGWN--------------SALESICAGVPILAW-----PIMADQPLNARMVTEEIKVALRVETCDGS 319 (395)
Q Consensus 259 ll~~~~~~~~IthgG~~--------------s~~Ea~~~GvP~i~~-----P~~~DQ~~na~~v~~~lg~g~~~~~~~~~ 319 (395)
+-.|+-++.+||--|.- .+.|.-.-|+|.|++ |...+-..-+..++++-++-+..-.+
T Consensus 141 I~dHSTIGiVVTTDGSi~dipRe~Y~eAEervI~ELk~igKPFvillNs~~P~s~et~~L~~eL~ekY~vpVlpvnc--- 217 (492)
T PF09547_consen 141 ITDHSTIGIVVTTDGSITDIPRENYVEAEERVIEELKEIGKPFVILLNSTKPYSEETQELAEELEEKYDVPVLPVNC--- 217 (492)
T ss_pred eccCCceeEEEecCCCccCCChHHHHHHHHHHHHHHHHhCCCEEEEEeCCCCCCHHHHHHHHHHHHHhCCcEEEeeh---
Confidence 34689999999998843 577778899998876 55555555666666665877765433
Q ss_pred CcCccCHHHHHHHHHHHh
Q 048238 320 VRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 320 ~~~~~~~~~l~~~i~~~l 337 (395)
..++.++|.+-+.++|
T Consensus 218 --~~l~~~DI~~Il~~vL 233 (492)
T PF09547_consen 218 --EQLREEDITRILEEVL 233 (492)
T ss_pred --HHcCHHHHHHHHHHHH
Confidence 5789999999999887
No 278
>PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=24.25 E-value=1.1e+02 Score=31.90 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=39.1
Q ss_pred ccCccceeecCCchhHHHHHh----cCCcEEeccCCCchhHHHHHHhhhhceEEEeeccCCCCcCccCHHHHHHHHHHHh
Q 048238 262 HESVQGFLSHCGWNSALESIC----AGVPILAWPIMADQPLNARMVTEEIKVALRVETCDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 262 ~~~~~~~IthgG~~s~~Ea~~----~GvP~i~~P~~~DQ~~na~~v~~~lg~g~~~~~~~~~~~~~~~~~~l~~~i~~~l 337 (395)
..++ +|+-||=||++.+.. .++|++.+-+. .+|.. ..++.+++.+++.+++
T Consensus 348 ~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGin~G--------------~lGFL---------~~~~~~~~~~~l~~~~ 402 (569)
T PRK14076 348 EISH--IISIGGDGTVLRASKLVNGEEIPIICINMG--------------TVGFL---------TEFSKEEIFKAIDSII 402 (569)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcCC--------------CCCcC---------cccCHHHHHHHHHHHH
Confidence 3456 999999999999876 47899888332 13332 2457788888898888
Q ss_pred CCC
Q 048238 338 GGE 340 (395)
Q Consensus 338 ~~~ 340 (395)
+++
T Consensus 403 ~g~ 405 (569)
T PRK14076 403 SGE 405 (569)
T ss_pred cCC
Confidence 765
No 279
>PLN02757 sirohydrochlorine ferrochelatase
Probab=24.22 E-value=4.3e+02 Score=22.12 Aligned_cols=29 Identities=28% Similarity=0.295 Sum_probs=23.3
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHh
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQ 219 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~ 219 (395)
...+|+|+-||........+.+++..+++
T Consensus 13 ~~~lllvgHGSrd~~a~~~~~~la~~l~~ 41 (154)
T PLN02757 13 KDGVVIVDHGSRRKESNLMLEEFVAMYKQ 41 (154)
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHh
Confidence 35899999999976666778888888864
No 280
>PRK00039 ruvC Holliday junction resolvase; Reviewed
Probab=24.22 E-value=1.5e+02 Score=25.11 Aligned_cols=48 Identities=8% Similarity=0.151 Sum_probs=33.3
Q ss_pred HHHhcHHHHHHHHhcCCCccEEEECCchhh---------------HHHHHHHcCCCcEEEecch
Q 048238 10 ATKLMQPHFERALESLPHVSFMVSDGFLWW---------------TLDSANKFGFPRFVFYGMN 58 (395)
Q Consensus 10 a~~~~~~~l~~~l~~~~kpD~vI~D~~~~~---------------~~~~A~~lgIP~i~~~~~~ 58 (395)
-+..+...+.++|++. +||.++.+-.++. ...++.+.|||..-+.|..
T Consensus 45 Rl~~I~~~l~~~i~~~-~Pd~vaiE~~f~~~n~~sa~~l~~arGvi~la~~~~~ipv~ey~P~~ 107 (164)
T PRK00039 45 RLKQIYDGLSELIDEY-QPDEVAIEEVFFNKNPQSALKLGQARGVAILAAAQRGLPVAEYTPLQ 107 (164)
T ss_pred HHHHHHHHHHHHHHHh-CCCEEEEehhhhccChHHHHHHHHHHHHHHHHHHHcCCCEEEECHHH
Confidence 3456678899999998 9999988864432 1124567788877775543
No 281
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=24.14 E-value=1.2e+02 Score=30.06 Aligned_cols=33 Identities=15% Similarity=0.224 Sum_probs=25.3
Q ss_pred HHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 19 ERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 19 ~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
.+.+++. +||++|... -+..+|+++|||.+-+.
T Consensus 343 ~~~~~~~-~pDl~Ig~s---~~~~~a~~~giP~~r~~ 375 (416)
T cd01980 343 IAAVEEY-RPDLAIGTT---PLVQYAKEKGIPALYYT 375 (416)
T ss_pred HHHHhhc-CCCEEEeCC---hhhHHHHHhCCCEEEec
Confidence 3445666 999999874 45668999999998653
No 282
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=24.11 E-value=1.5e+02 Score=23.49 Aligned_cols=35 Identities=9% Similarity=0.159 Sum_probs=25.1
Q ss_pred eeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcC
Q 048238 194 VMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRK 230 (395)
Q Consensus 194 vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~ 230 (395)
+++++.||.+-. .=+..++++|.+.|+.|.+.+..
T Consensus 1 Ili~~~Gt~Ghv--~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 1 ILIATGGTRGHV--YPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp EEEEEESSHHHH--HHHHHHHHHHHHTT-EEEEEETG
T ss_pred CEEEEcCChhHH--HHHHHHHHHHhccCCeEEEeecc
Confidence 467788887632 23457889999999999877764
No 283
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=24.04 E-value=3.7e+02 Score=25.68 Aligned_cols=104 Identities=16% Similarity=0.188 Sum_probs=67.1
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCC-eEEecCCCHHHHhcccCcccee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRG-LVVRDWVNQKEILWHESVQGFL 269 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~pq~~ll~~~~~~~~I 269 (395)
.+.+-.|.+|.++ .++++.++..|.+++.--... +... .+ .-+.......++|+.+|+ ++
T Consensus 142 gkTvGIiG~G~IG-------~~va~~l~afgm~v~~~d~~~----~~~~------~~~~~~~~~~~Ld~lL~~sDi--v~ 202 (324)
T COG0111 142 GKTVGIIGLGRIG-------RAVAKRLKAFGMKVIGYDPYS----PRER------AGVDGVVGVDSLDELLAEADI--LT 202 (324)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCCCeEEEECCCC----chhh------hccccceecccHHHHHhhCCE--EE
Confidence 4678889999987 455666666788865433211 1100 01 112234457889999999 88
Q ss_pred ecCCchhHHHHHhcCCcEEeccCCCc--hhHHHHHHhhhhceE-EEeeccCCCCcCccCHHHHHHHHHH
Q 048238 270 SHCGWNSALESICAGVPILAWPIMAD--QPLNARMVTEEIKVA-LRVETCDGSVRGFVKWQGLEKTVRE 335 (395)
Q Consensus 270 thgG~~s~~Ea~~~GvP~i~~P~~~D--Q~~na~~v~~~lg~g-~~~~~~~~~~~~~~~~~~l~~~i~~ 335 (395)
.|. |+..| ...|++.+... +-| +.++. .|...++.+.|.+++++
T Consensus 203 lh~------------------PlT~eT~g~i~~~~~a~M-K~gailIN~---aRG~vVde~aL~~AL~~ 249 (324)
T COG0111 203 LHL------------------PLTPETRGLINAEELAKM-KPGAILINA---ARGGVVDEDALLAALDS 249 (324)
T ss_pred EcC------------------CCCcchhcccCHHHHhhC-CCCeEEEEC---CCcceecHHHHHHHHHc
Confidence 886 88655 45688877444 433 55665 56677888888888876
No 284
>PLN03139 formate dehydrogenase; Provisional
Probab=23.95 E-value=3.3e+02 Score=26.75 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=40.9
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceee
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLS 270 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~It 270 (395)
++.+-.|.+|.++ ..+++.+...|.+++. +... ..+..... ..++. ......++++.+|+ ++.
T Consensus 199 gktVGIVG~G~IG-------~~vA~~L~afG~~V~~-~d~~--~~~~~~~~---~~g~~--~~~~l~ell~~sDv--V~l 261 (386)
T PLN03139 199 GKTVGTVGAGRIG-------RLLLQRLKPFNCNLLY-HDRL--KMDPELEK---ETGAK--FEEDLDAMLPKCDV--VVI 261 (386)
T ss_pred CCEEEEEeecHHH-------HHHHHHHHHCCCEEEE-ECCC--CcchhhHh---hcCce--ecCCHHHHHhhCCE--EEE
Confidence 5678899999997 4566667677888654 4331 11111111 11221 12256789999999 888
Q ss_pred cCCch
Q 048238 271 HCGWN 275 (395)
Q Consensus 271 hgG~~ 275 (395)
|+-.+
T Consensus 262 ~lPlt 266 (386)
T PLN03139 262 NTPLT 266 (386)
T ss_pred eCCCC
Confidence 88543
No 285
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=23.84 E-value=1.7e+02 Score=26.33 Aligned_cols=90 Identities=18% Similarity=0.241 Sum_probs=47.0
Q ss_pred chHHHHHhhhccCCCCCeeEEEecccccC-------C--HHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCC
Q 048238 177 KPAWIRWLDRKLDEGSSVMYVAFGSQAEI-------S--AQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRG 247 (395)
Q Consensus 177 ~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~-------~--~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 247 (395)
...+.+|+... ..++-.++-.|=+.-. . ...+..++..+...+.+++++.|..+..+...+.+ ..+
T Consensus 19 ~~~~~~~l~~~--~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNHD~~~~~~~~~---~~g 93 (241)
T PRK05340 19 TAAFLRFLRGE--ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNRDFLLGKRFAK---AAG 93 (241)
T ss_pred HHHHHHHHHhh--hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCCchhhhHHHHH---hCC
Confidence 34566777553 2344455556766421 1 23445566777777889999998864323222322 133
Q ss_pred eEEecCCCHHHHhcccCccceeecCCc
Q 048238 248 LVVRDWVNQKEILWHESVQGFLSHCGW 274 (395)
Q Consensus 248 ~~~~~~~pq~~ll~~~~~~~~IthgG~ 274 (395)
+.+. +...++.....+.+|+||-.
T Consensus 94 ~~~l---~~~~~~~~~g~~i~l~HGd~ 117 (241)
T PRK05340 94 MTLL---PDPSVIDLYGQRVLLLHGDT 117 (241)
T ss_pred CEEe---CCcEEEEECCEEEEEECCcc
Confidence 3332 22222333444558999863
No 286
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=23.64 E-value=2.8e+02 Score=27.47 Aligned_cols=50 Identities=12% Similarity=0.072 Sum_probs=37.5
Q ss_pred HhcHHHHHHHHhcCCCccEEEECCchh----hHHHHH---HHcCCCcEEEecchHHHH
Q 048238 12 KLMQPHFERALESLPHVSFMVSDGFLW----WTLDSA---NKFGFPRFVFYGMNNYVM 62 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~~~~----~~~~~A---~~lgIP~i~~~~~~~~~~ 62 (395)
+.+-+.+.+.|++. ++|.||..+.|. |+..++ ++.|||.|...+....+.
T Consensus 322 ~~~g~eIa~~Lk~d-gVDAVILTstCgtC~r~~a~m~keiE~~GiPvv~~~~~~pis~ 378 (431)
T TIGR01918 322 KQFAKEFVVELKQG-GVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHMCTVIPIAL 378 (431)
T ss_pred HHHHHHHHHHHHHc-CCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeecccHhh
Confidence 56677888888887 999999986544 666666 557999999887665443
No 287
>TIGR01744 XPRTase xanthine phosphoribosyltransferase. This model represent a xanthine-specific phosphoribosyltransferase of Bacillus subtilis and closely related proteins from other species, mostly from other Gram-positive bacteria. The adjacent gene is a xanthine transporter; B. subtilis can import xanthine for the purine salvage pathway or for catabolism to obtain nitrogen.
Probab=23.63 E-value=1.9e+02 Score=25.21 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCccEEEECC--chhhHHHHHHHcCCCcEEEe
Q 048238 15 QPHFERALESLPHVSFMVSDG--FLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~--~~~~~~~~A~~lgIP~i~~~ 55 (395)
-..+.+.+++. ++|+|++=- -.+.+..+|..+|+|++..-
T Consensus 39 ~~~l~~~~~~~-~~d~Vv~~ea~Gi~la~~lA~~Lg~p~v~vR 80 (191)
T TIGR01744 39 GEEFARRFADD-GITKIVTIEASGIAPAIMTGLKLGVPVVFAR 80 (191)
T ss_pred HHHHHHHhccC-CCCEEEEEccccHHHHHHHHHHHCCCEEEEE
Confidence 33444444555 899998532 23477778999999999764
No 288
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=23.63 E-value=2.2e+02 Score=27.81 Aligned_cols=82 Identities=16% Similarity=0.179 Sum_probs=54.2
Q ss_pred CHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhH---HH----------HhcCCCeEEecCCCHHH---HhcccCcccee
Q 048238 206 SAQQLKEIATGLEQSKVNFLWVIRKAESELGDGF---EE----------RVKGRGLVVRDWVNQKE---ILWHESVQGFL 269 (395)
Q Consensus 206 ~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~---~~----------~~~~~~~~~~~~~pq~~---ll~~~~~~~~I 269 (395)
+...+..+++++.+.+.++...+.... ....+ .. ..+.-.+.+.+|+||.+ +|..+|+ -+
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~--~~~~~~~~~~~~~~~~g~~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--Nf 268 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGR--ALNSLAAWLGDALLQAGDSWQRGNLTLHVLPFVPQDDYDRLLWACDF--NF 268 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCc--cHHHHHHHhccccccCccccccCCeEEEECCCCCHHHHHHHHHhCcc--ce
Confidence 345578889999888887766655431 11111 00 01122366789999864 9999998 55
Q ss_pred ecCCchhHHHHHhcCCcEEeccC
Q 048238 270 SHCGWNSALESICAGVPILAWPI 292 (395)
Q Consensus 270 thgG~~s~~Ea~~~GvP~i~~P~ 292 (395)
-+ |==|..-|..+|+|+|--..
T Consensus 269 VR-GEDSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 269 VR-GEDSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred Ee-cchHHHHHHHhCCCceEecC
Confidence 55 45699999999999995543
No 289
>TIGR01862 N2-ase-Ialpha nitrogenase component I, alpha chain. This model represents the alpha chain of all three varieties (Mo-Fe, V-Fe, and Fe-Fe) of component I of nitrogenase.
Probab=23.48 E-value=83 Score=31.48 Aligned_cols=36 Identities=28% Similarity=0.269 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+.+++. +||++|... .+..+|+++|||++-.
T Consensus 376 ~~e~~~~i~~~-~pdllig~s---~~~~~A~~lgip~~~~ 411 (443)
T TIGR01862 376 ELEFEEILEKL-KPDIIFSGI---KEKFVAQKLGVPYRQM 411 (443)
T ss_pred HHHHHHHHHhc-CCCEEEEcC---cchhhhhhcCCCeEec
Confidence 34566667787 999999776 4567899999999854
No 290
>cd06559 Endonuclease_V Endonuclease_V, a DNA repair enzyme that initiates repair of nitrosative deaminated purine bases. Endonuclease_V (EndoV) is an enzyme that can initiate repair of all possible deaminated DNA bases. EndoV cleaves the DNA strand containing lesions at the second phosphodiester bond 3' to the lesion using Mg2+ as a cofactor. EndoV homologs are conserved throughout all domains of life from bacteria to humans. EndoV is encoded by the nfi gene and nfi null mutant mice have a phenotype prone to cancer. The ability of endonuclease V to recognize mismatches and abnormal replicative DNA structures suggests that the enzyme plays an important role in DNA metabolism. The details of downstream processing for the EndoV pathway remain unknown.
Probab=23.45 E-value=81 Score=28.01 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=24.9
Q ss_pred HHHHHHHhcC-CCccEEEECCchh---hHHHHH----HHcCCCcEEEe
Q 048238 16 PHFERALESL-PHVSFMVSDGFLW---WTLDSA----NKFGFPRFVFY 55 (395)
Q Consensus 16 ~~l~~~l~~~-~kpD~vI~D~~~~---~~~~~A----~~lgIP~i~~~ 55 (395)
|.+.+++++. ..||+||.|..-. -...+| -.+++|+|...
T Consensus 81 p~l~~~~~~l~~~PDlilVDG~G~~HpR~~GlA~HlGv~l~~PtIGVA 128 (208)
T cd06559 81 PPLLEALEKLKTKPDLLLVDGHGIAHPRRFGLASHLGVLLDLPTIGVA 128 (208)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCccccCCCcchhheeeeecCCCEEEEE
Confidence 4467777766 3699999997433 122233 44667877663
No 291
>TIGR02836 spore_IV_A stage IV sporulation protein A. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, a member of this panel, is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis.
Probab=23.44 E-value=3.2e+02 Score=27.39 Aligned_cols=75 Identities=11% Similarity=0.134 Sum_probs=49.5
Q ss_pred HHHhc-ccCccceeecCCc--------------hhHHHHHhcCCcEEeccCCCc-----hhHHHHHHhhhhceE-EEeec
Q 048238 257 KEILW-HESVQGFLSHCGW--------------NSALESICAGVPILAWPIMAD-----QPLNARMVTEEIKVA-LRVET 315 (395)
Q Consensus 257 ~~ll~-~~~~~~~IthgG~--------------~s~~Ea~~~GvP~i~~P~~~D-----Q~~na~~v~~~lg~g-~~~~~ 315 (395)
..++. |++++.+||-.|. ..+.|.-..|+|.|++=-..| ...-+..+.++.++- +.++-
T Consensus 138 ~kVI~dhstIgivVtTDgsi~dI~Re~y~~aEe~~i~eLk~~~kPfiivlN~~dp~~~et~~l~~~l~eky~vpvl~v~c 217 (492)
T TIGR02836 138 RKVIQEHSTIGVVVTTDGTITDIPREDYVEAEERVIEELKELNKPFIILLNSTHPYHPETEALRQELEEKYDVPVLAMDV 217 (492)
T ss_pred HHHHHhcCcEEEEEEcCCCccccccccchHHHHHHHHHHHhcCCCEEEEEECcCCCCchhHHHHHHHHHHhCCceEEEEH
Confidence 35777 9999999996552 245566778999887633322 222233454544654 33443
Q ss_pred cCCCCcCccCHHHHHHHHHHHh
Q 048238 316 CDGSVRGFVKWQGLEKTVRELM 337 (395)
Q Consensus 316 ~~~~~~~~~~~~~l~~~i~~~l 337 (395)
..++.++|.+-++++|
T Consensus 218 ------~~l~~~DI~~il~~vL 233 (492)
T TIGR02836 218 ------ESMRESDILSVLEEVL 233 (492)
T ss_pred ------HHcCHHHHHHHHHHHH
Confidence 5789999999999987
No 292
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion]
Probab=23.42 E-value=1.3e+02 Score=27.65 Aligned_cols=41 Identities=15% Similarity=0.235 Sum_probs=31.5
Q ss_pred HHHHHHHHhcCCCccEEEE-----CCchh-hHHHHHHHcCCCcEEEec
Q 048238 15 QPHFERALESLPHVSFMVS-----DGFLW-WTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~-----D~~~~-~~~~~A~~lgIP~i~~~~ 56 (395)
...+.+.++.. .+|+||+ |..+. -+..+|+.||+|++.+..
T Consensus 100 a~~Laa~~~~~-~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~ 146 (260)
T COG2086 100 AKALAAAVKKI-GPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVS 146 (260)
T ss_pred HHHHHHHHHhc-CCCEEEEecccccCCccchHHHHHHHhCCceeeeEE
Confidence 44566777777 9999986 44444 778899999999998755
No 293
>PRK04940 hypothetical protein; Provisional
Probab=23.38 E-value=2.3e+02 Score=24.53 Aligned_cols=31 Identities=13% Similarity=0.202 Sum_probs=25.2
Q ss_pred CccEEEECCchh-hHHHHHHHcCCCcEEEecc
Q 048238 27 HVSFMVSDGFLW-WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 27 kpD~vI~D~~~~-~~~~~A~~lgIP~i~~~~~ 57 (395)
++.++|-..+-. |+.-+|+++|+|.|.+.|.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNPA 91 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNPN 91 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECCC
Confidence 467777777555 8888999999999999775
No 294
>COG1938 Archaeal enzymes of ATP-grasp superfamily [General function prediction only]
Probab=23.35 E-value=5.7e+02 Score=23.31 Aligned_cols=23 Identities=17% Similarity=0.117 Sum_probs=18.9
Q ss_pred eeecCCchhHHHHHhcCCcEEec
Q 048238 268 FLSHCGWNSALESICAGVPILAW 290 (395)
Q Consensus 268 ~IthgG~~s~~Ea~~~GvP~i~~ 290 (395)
.|+--+..-+.||...|+|.+++
T Consensus 153 ~I~G~~g~ll~e~~~r~i~a~~l 175 (244)
T COG1938 153 TIVGPSGALLNECLKRGIPALVL 175 (244)
T ss_pred eeecccHHHHHHHHHcCCCeEEE
Confidence 67777778899999999997754
No 295
>TIGR01162 purE phosphoribosylaminoimidazole carboxylase, PurE protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, an N5-CAIR mutase.
Probab=23.29 E-value=4.6e+02 Score=22.14 Aligned_cols=135 Identities=15% Similarity=0.177 Sum_probs=65.7
Q ss_pred EEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchh
Q 048238 197 VAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNS 276 (395)
Q Consensus 197 vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s 276 (395)
|-+||.+ +.+..++....|+..+..+-..+-+. ...|+.+.+-. -+ ......+.||+-.|...
T Consensus 3 IimGS~S--D~~~~~~a~~~L~~~gi~~dv~V~Sa-HRtp~~~~~~~-----------~~---a~~~g~~viIa~AG~aa 65 (156)
T TIGR01162 3 IIMGSDS--DLPTMKKAADILEEFGIPYELRVVSA-HRTPELMLEYA-----------KE---AEERGIKVIIAGAGGAA 65 (156)
T ss_pred EEECcHh--hHHHHHHHHHHHHHcCCCeEEEEECc-ccCHHHHHHHH-----------HH---HHHCCCeEEEEeCCccc
Confidence 4456654 45677778888888776654433321 12333322211 00 00011233888888654
Q ss_pred HHHHH---hcCCcEEeccCCCc--hhHHHH-HHhh--hhce--EEEeeccCCCCcCccCHHHHHHHHHHHhCCChhHHHH
Q 048238 277 ALESI---CAGVPILAWPIMAD--QPLNAR-MVTE--EIKV--ALRVETCDGSVRGFVKWQGLEKTVRELMGGEKGEKAR 346 (395)
Q Consensus 277 ~~Ea~---~~GvP~i~~P~~~D--Q~~na~-~v~~--~lg~--g~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~~ 346 (395)
-+-.+ ..-+|+|.+|.... .-.++. -+.+ . |+ +...-. +..++..++..|-. +.|+ .++
T Consensus 66 ~Lpgvva~~t~~PVIgvP~~~~~l~G~daLlS~vqmP~-gvpvatv~I~------~~~nAa~~AaqIl~-~~d~---~l~ 134 (156)
T TIGR01162 66 HLPGMVAALTPLPVIGVPVPSKALSGLDSLLSIVQMPS-GVPVATVAIG------NAGNAALLAAQILG-IKDP---ELA 134 (156)
T ss_pred hhHHHHHhccCCCEEEecCCccCCCCHHHHHHHhcCCC-CCeeEEEEcC------ChhHHHHHHHHHHc-CCCH---HHH
Confidence 44333 34589999998432 122221 1223 3 53 332221 34455555554432 2455 566
Q ss_pred HHHHHHHHHHHHh
Q 048238 347 TKVKELSEIARKA 359 (395)
Q Consensus 347 ~~a~~l~~~~~~~ 359 (395)
++.+..++...+.
T Consensus 135 ~kl~~~r~~~~~~ 147 (156)
T TIGR01162 135 EKLKEYRENQKEE 147 (156)
T ss_pred HHHHHHHHHHHHH
Confidence 6666666655543
No 296
>TIGR02015 BchY chlorophyllide reductase subunit Y. This model represents the Y subunit of the three-subunit enzyme, (bacterio)chlorophyllide reductase. This enzyme is responsible for the reduction of the chlorin B-ring and is closely related to the protochlorophyllide reductase complex which reduces the D-ring. Both of these complexes in turn are homologous to nitrogenase.
Probab=23.27 E-value=86 Score=31.18 Aligned_cols=32 Identities=16% Similarity=0.278 Sum_probs=25.1
Q ss_pred HHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEEe
Q 048238 20 RALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 20 ~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~~ 55 (395)
+.+++. +||++|.... +..+|+++|||.+.+.
T Consensus 349 ~~l~~~-~pDllig~s~---~~~~A~k~gIP~vr~g 380 (422)
T TIGR02015 349 EAVLEF-EPDLAIGTTP---LVQFAKEHGIPALYFT 380 (422)
T ss_pred HHHhhC-CCCEEEcCCc---chHHHHHcCCCEEEec
Confidence 455676 9999998853 4558999999999763
No 297
>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III. These are multidomain proteins, in which MGS is the C-terminal domain.
Probab=23.15 E-value=86 Score=24.61 Aligned_cols=36 Identities=14% Similarity=0.250 Sum_probs=28.4
Q ss_pred HHHHHHHhcCCCccEEEECCc---------hhhHHHHHHHcCCCcE
Q 048238 16 PHFERALESLPHVSFMVSDGF---------LWWTLDSANKFGFPRF 52 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~---------~~~~~~~A~~lgIP~i 52 (395)
+.+.++|++- ++|+||.-+. .+.....|-.+|||++
T Consensus 61 ~~i~~~i~~~-~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~i 105 (116)
T cd01423 61 PSLRELLAEG-KIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLI 105 (116)
T ss_pred hhHHHHHHcC-CceEEEECCCCCCCccccCcEeeehhhHhhCCccc
Confidence 7788899987 9999999543 2345567899999996
No 298
>TIGR01860 VNFD nitrogenase vanadium-iron protein, alpha chain. This model represents the alpha chain of the vanadium-containing component of the vanadium-iron nitrogenase compound I. The complex also includes a second alpha chain, two beta chains and two delta chains. Compount I interacts with compound II also known as the iron-protein which transfers electrons to compound I where the catalysis occurs.
Probab=23.00 E-value=92 Score=31.35 Aligned_cols=32 Identities=13% Similarity=0.206 Sum_probs=24.8
Q ss_pred HHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcE
Q 048238 17 HFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRF 52 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i 52 (395)
.+.+.+++. +||++|... ....+|+++|||++
T Consensus 388 e~~~~~~~~-~pDliig~s---~~~~~A~klgiP~v 419 (461)
T TIGR01860 388 EFFEVLDLI-KPDVIFTGP---RVGELVKKLHIPYV 419 (461)
T ss_pred HHHHHHHhc-CCCEEEeCC---cchhhHhhcCCCEE
Confidence 344566777 999999876 44568999999997
No 299
>PRK15411 rcsA colanic acid capsular biosynthesis activation protein A; Provisional
Probab=22.97 E-value=1.5e+02 Score=26.02 Aligned_cols=41 Identities=15% Similarity=0.049 Sum_probs=25.0
Q ss_pred HHHHHHhcCCCccEEEEC----CchhhHHHHHHHc-----CCCcEEEecch
Q 048238 17 HFERALESLPHVSFMVSD----GFLWWTLDSANKF-----GFPRFVFYGMN 58 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D----~~~~~~~~~A~~l-----gIP~i~~~~~~ 58 (395)
.+.+.+++. +|||||.| .-..-+..+++.+ ++|.++++...
T Consensus 38 ~~~~~~~~~-~pDlvLlDl~~~l~~~~g~~~i~~i~~~~p~~~iivlt~~~ 87 (207)
T PRK15411 38 DLAIACDSL-RPSVVFINEDCFIHDASNSQRIKQIINQHPNTLFIVFMAIA 87 (207)
T ss_pred HHHHHHhcc-CCCEEEEeCcccCCCCChHHHHHHHHHHCCCCeEEEEECCC
Confidence 344455665 89999999 3233444555433 47777776543
No 300
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=22.79 E-value=1.8e+02 Score=27.43 Aligned_cols=74 Identities=8% Similarity=0.118 Sum_probs=45.1
Q ss_pred cCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCccceeecCCchhHHHHHh-
Q 048238 204 EISAQQLKEIATGLEQSKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFLSHCGWNSALESIC- 282 (395)
Q Consensus 204 ~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~IthgG~~s~~Ea~~- 282 (395)
..+.+...+|.+++.+.+.+.||.+.+.+. -..+.++++...+-+||.. ||=.+-.++++-+++
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g-------------~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~al~~ 113 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGDD-------------SNELLPYLDYELIKKNPKI--FIGYSDITALHLAIYK 113 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCcccC-------------HhhhhhhcCHHHHhhCCCE--EEeccHHHHHHHHHHH
Confidence 345677888999999999999998876411 1223344444444455544 666666666666653
Q ss_pred -cCCcEEeccC
Q 048238 283 -AGVPILAWPI 292 (395)
Q Consensus 283 -~GvP~i~~P~ 292 (395)
+|.+.+.-|.
T Consensus 114 ~~g~~t~hGp~ 124 (308)
T cd07062 114 KTGLVTYYGPN 124 (308)
T ss_pred hcCCeEEECcc
Confidence 3555555554
No 301
>TIGR01284 alt_nitrog_alph nitrogenase alpha chain. This model represents the alpha chains of various forms of the nitrogen-fixing enzyme nitrogenase: vanadium-iron, iron-iron, and molybdenum-iron. Most examples of NifD, the molybdenum-iron type nitrogenase alpha chain, are excluded from this model and described instead by equivalog model TIGR01282. It appears by phylogenetic and UPGMA trees that this model represents a distinct clade of NifD homologs, in which arose several molybdenum-independent forms.
Probab=22.74 E-value=75 Score=31.94 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=28.4
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+.+++. +||++|... ....+|+++|||++..
T Consensus 384 ~~e~~~~i~~~-~pDllig~~---~~~~~a~k~gip~~~~ 419 (457)
T TIGR01284 384 ELELEEIIEKY-KPDIILTGI---REGELAKKLGVPYINI 419 (457)
T ss_pred HHHHHHHHHhc-CCCEEEecC---CcchhhhhcCCCEEEc
Confidence 44677778888 999999776 3456899999999865
No 302
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=22.59 E-value=1.4e+02 Score=19.12 Aligned_cols=26 Identities=19% Similarity=0.335 Sum_probs=17.6
Q ss_pred CHHHHHHHHHHHhCCChhHHHHHHHHHH
Q 048238 325 KWQGLEKTVRELMGGEKGEKARTKVKEL 352 (395)
Q Consensus 325 ~~~~l~~~i~~~l~~~~~~~~~~~a~~l 352 (395)
++++|..||..+.++.- ++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~~--S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGKM--SIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTSS---HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCC--CHHHHHHHH
Confidence 46889999999987632 676666553
No 303
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=22.43 E-value=1.7e+02 Score=30.32 Aligned_cols=26 Identities=12% Similarity=0.146 Sum_probs=20.9
Q ss_pred cceeecCCc------hhHHHHHhcCCcEEecc
Q 048238 266 QGFLSHCGW------NSALESICAGVPILAWP 291 (395)
Q Consensus 266 ~~~IthgG~------~s~~Ea~~~GvP~i~~P 291 (395)
+++++|.|- +.+.+|...++|||++.
T Consensus 70 gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 70 GVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 347777773 47789999999999985
No 304
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.23 E-value=2.2e+02 Score=29.34 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=21.9
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.|- +++++|...++|||++-
T Consensus 67 ~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 67 VGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4448888874 58889999999999884
No 305
>TIGR01283 nifE nitrogenase molybdenum-iron cofactor biosynthesis protein NifE. This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein.
Probab=22.16 E-value=1.2e+02 Score=30.36 Aligned_cols=36 Identities=17% Similarity=0.234 Sum_probs=28.4
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+.+++. +||++|... ....+|+++|||++.+
T Consensus 384 ~~e~~~~i~~~-~pDl~ig~~---~~~~~a~k~giP~i~~ 419 (456)
T TIGR01283 384 PRELLKLLLEY-KADLLIAGG---KERYTALKLGIPFCDI 419 (456)
T ss_pred HHHHHHHHhhc-CCCEEEEcc---chHHHHHhcCCCEEEc
Confidence 46677888888 999999763 4456889999998865
No 306
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=22.11 E-value=2.8e+02 Score=26.77 Aligned_cols=24 Identities=13% Similarity=0.288 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEEcCC
Q 048238 208 QQLKEIATGLEQSKVNFLWVIRKA 231 (395)
Q Consensus 208 ~~~~~l~~~l~~~~~~~i~~~~~~ 231 (395)
.+++.++.+|.+.|+.+.+.+...
T Consensus 11 ~~~~~la~~L~~~G~~v~~~~~~~ 34 (396)
T cd03818 11 GQFRHLAPALAAQGHEVVFLTEPN 34 (396)
T ss_pred hhHHHHHHHHHHCCCEEEEEecCC
Confidence 457889999999999987777654
No 307
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=22.06 E-value=6e+02 Score=23.43 Aligned_cols=97 Identities=13% Similarity=0.202 Sum_probs=49.2
Q ss_pred CCeeEEEecccccCCHHHHHHHH---HHHH-hCCCcEEEEEcCCCC--ccchhHHHHhcCCCeEEecCCCH--HHHhccc
Q 048238 192 SSVMYVAFGSQAEISAQQLKEIA---TGLE-QSKVNFLWVIRKAES--ELGDGFEERVKGRGLVVRDWVNQ--KEILWHE 263 (395)
Q Consensus 192 ~~vv~vs~Gs~~~~~~~~~~~l~---~~l~-~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~pq--~~ll~~~ 263 (395)
++.|.|+.......+.+....++ +.+. +.++++++..-.... .....+.+.......++...-|+ ..+++++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~ 251 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASA 251 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhC
Confidence 56777776553233333333443 3332 347887665432111 11112222222222222222232 3477888
Q ss_pred CccceeecCCchhHHHHHhcCCcEEecc
Q 048238 264 SVQGFLSHCGWNSALESICAGVPILAWP 291 (395)
Q Consensus 264 ~~~~~IthgG~~s~~Ea~~~GvP~i~~P 291 (395)
++ +|+-==| ++.-|+.+|+|.+.+.
T Consensus 252 ~~--vI~~RlH-~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 252 RL--VIGMRLH-ALILAAAAGVPFVALS 276 (298)
T ss_pred CE--EEEechH-HHHHHHHcCCCEEEee
Confidence 87 8875444 3455788999999885
No 308
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=21.94 E-value=6.1e+02 Score=23.07 Aligned_cols=104 Identities=13% Similarity=0.159 Sum_probs=54.2
Q ss_pred eeEEEe-cccccCCHHHHHHHHHHHHh-CCCcEEEEEcCCCCccchhHHHHhcCCCeEEecCCCHHHHhcccCcccee--
Q 048238 194 VMYVAF-GSQAEISAQQLKEIATGLEQ-SKVNFLWVIRKAESELGDGFEERVKGRGLVVRDWVNQKEILWHESVQGFL-- 269 (395)
Q Consensus 194 vv~vs~-Gs~~~~~~~~~~~l~~~l~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pq~~ll~~~~~~~~I-- 269 (395)
+..+.. |.++ +.++..+.. .+..++.++....... ... ...++ ..+-...+++..+|+ +|
T Consensus 4 V~IiG~~G~mG-------~~i~~~l~~~~~~elvav~d~~~~~~-~~~----~~~~i--~~~~dl~~ll~~~Dv--Vid~ 67 (257)
T PRK00048 4 VAVAGASGRMG-------RELIEAVEAAEDLELVAAVDRPGSPL-VGQ----GALGV--AITDDLEAVLADADV--LIDF 67 (257)
T ss_pred EEEECCCCHHH-------HHHHHHHHhCCCCEEEEEEecCCccc-ccc----CCCCc--cccCCHHHhccCCCE--EEEC
Confidence 455554 6665 234444443 5677777776531111 000 11122 122344556766777 55
Q ss_pred ecC--CchhHHHHHhcCCcEEeccCCCc--hhHHHHHHhhhhceEEEeec
Q 048238 270 SHC--GWNSALESICAGVPILAWPIMAD--QPLNARMVTEEIKVALRVET 315 (395)
Q Consensus 270 thg--G~~s~~Ea~~~GvP~i~~P~~~D--Q~~na~~v~~~lg~g~~~~~ 315 (395)
|+. ..--+..++.+|+|+++-|.... |..--..+ .+ ++++.+..
T Consensus 68 t~p~~~~~~~~~al~~G~~vvigttG~s~~~~~~l~~a-a~-~~~v~~s~ 115 (257)
T PRK00048 68 TTPEATLENLEFALEHGKPLVIGTTGFTEEQLAELEEA-AK-KIPVVIAP 115 (257)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHH-hc-CCCEEEEC
Confidence 322 13455568999999998886433 32222333 35 77877765
No 309
>cd03415 CbiX_CbiC Archaeal sirohydrochlorin cobalt chelatase (CbiX) single domain. Proteins in this subgroup contain a single CbiX domain N-terminal to a precorrin-8X methylmutase (CbiC) domain. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, while CbiC catalyzes the conversion of cobalt-precorrin 8 to cobyrinic acid by methyl rearrangement. Both CbiX and CbiC are involved in vitamin B12 biosynthesis.
Probab=21.84 E-value=4.3e+02 Score=21.26 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=24.9
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHHh-CCCcEEE
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLEQ-SKVNFLW 226 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~~-~~~~~i~ 226 (395)
.+++++-||-.....+.+.+++..++. .+..+-+
T Consensus 2 ~lllvgHGSR~~~~~~~~~~la~~l~~~~~~~v~~ 36 (125)
T cd03415 2 AIIIITHGSRRNTFNEDMEEWAAYLERKLGVPVYL 36 (125)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHHHhccCCceEE
Confidence 478899999887677888888888854 4445433
No 310
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=21.79 E-value=1.9e+02 Score=24.34 Aligned_cols=43 Identities=9% Similarity=0.009 Sum_probs=29.8
Q ss_pred cHHHHHHHHhcCCCccEEEECCchh---hHHHHHHHcCCCcEEEecc
Q 048238 14 MQPHFERALESLPHVSFMVSDGFLW---WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~~~~---~~~~~A~~lgIP~i~~~~~ 57 (395)
...-+.+++++. +||+|+.-.... .+..+|.++|.|++.-...
T Consensus 71 ~a~al~~~i~~~-~p~~Vl~~~t~~g~~la~rlAa~L~~~~vtdv~~ 116 (168)
T cd01715 71 YAPALVALAKKE-KPSHILAGATSFGKDLAPRVAAKLDVGLISDVTA 116 (168)
T ss_pred HHHHHHHHHHhc-CCCEEEECCCccccchHHHHHHHhCCCceeeEEE
Confidence 345566666776 789888765333 6677888899888866553
No 311
>PRK08558 adenine phosphoribosyltransferase; Provisional
Probab=21.74 E-value=1.9e+02 Score=26.20 Aligned_cols=28 Identities=14% Similarity=0.100 Sum_probs=21.3
Q ss_pred CccEEEECC--chhhHHHHHHHcCCCcEEE
Q 048238 27 HVSFMVSDG--FLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 27 kpD~vI~D~--~~~~~~~~A~~lgIP~i~~ 54 (395)
++|+|++=. -.+++..+|..+|+|++..
T Consensus 111 ~~D~Vvtv~~~GI~lA~~lA~~L~~p~vi~ 140 (238)
T PRK08558 111 RVDVVLTAATDGIPLAVAIASYFGADLVYA 140 (238)
T ss_pred CCCEEEEECcccHHHHHHHHHHHCcCEEEE
Confidence 789887643 3447777999999998855
No 312
>COG3947 Response regulator containing CheY-like receiver and SARP domains [Signal transduction mechanisms]
Probab=21.66 E-value=1.5e+02 Score=27.98 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=31.0
Q ss_pred HHHHhcCCCccEEEECCchh--hHHHHHHHc-----CCCcEEEecchHHHH
Q 048238 19 ERALESLPHVSFMVSDGFLW--WTLDSANKF-----GFPRFVFYGMNNYVM 62 (395)
Q Consensus 19 ~~~l~~~~kpD~vI~D~~~~--~~~~~A~~l-----gIP~i~~~~~~~~~~ 62 (395)
.++|+.. +||+++.|.-++ -+.++|++- .||.|+.++..-+..
T Consensus 37 l~~Le~~-kpDLifldI~mp~~ngiefaeQvr~i~~~v~iifIssh~eya~ 86 (361)
T COG3947 37 LDLLEVF-KPDLIFLDIVMPYMNGIEFAEQVRDIESAVPIIFISSHAEYAD 86 (361)
T ss_pred HHHHHhc-CCCEEEEEeecCCccHHHHHHHHHHhhccCcEEEEecchhhhh
Confidence 3456666 999999999777 577777653 488888877655443
No 313
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=21.59 E-value=2e+02 Score=29.88 Aligned_cols=27 Identities=15% Similarity=0.238 Sum_probs=21.6
Q ss_pred ccceeecCC------chhHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCG------WNSALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG------~~s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.| .+++.+|.+.++|+|++.
T Consensus 64 ~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 64 VGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 344888877 358889999999999884
No 314
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=21.30 E-value=7.9e+02 Score=24.14 Aligned_cols=142 Identities=13% Similarity=0.178 Sum_probs=74.5
Q ss_pred CCCeeEEEecccccCCHHHHHHHHHHHHhCCCcEEEEEcCCCCccc--hhHHHHhcCCCeEEecCCC------HHHHhcc
Q 048238 191 GSSVMYVAFGSQAEISAQQLKEIATGLEQSKVNFLWVIRKAESELG--DGFEERVKGRGLVVRDWVN------QKEILWH 262 (395)
Q Consensus 191 ~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p------q~~ll~~ 262 (395)
.+.+++.-.||+... ....+++.|.+.++.+-++..+....+- ..+. ...+..+...-|.+ +.++...
T Consensus 3 ~k~IllgiTGSiaa~---~~~~ll~~L~~~g~~V~vv~T~~A~~fv~~~~l~-~~~~~~v~~~~~~~~~~~~~hi~l~~~ 78 (390)
T TIGR00521 3 NKKILLGVTGGIAAY---KTVELVRELVRQGAEVKVIMTEAAKKFITPLTLE-ALSGHKVVTELWGPIEHNALHIDLAKW 78 (390)
T ss_pred CCEEEEEEeCHHHHH---HHHHHHHHHHhCCCEEEEEECHhHHHHHHHHHHH-HhhCCceeehhccccccccchhhcccc
Confidence 356777778887652 2455666676777777666655321111 1111 11222233322322 1223344
Q ss_pred cCccceeecCCchhHHHH-------------HhcCCcEEeccCCCchhH-------HHHHHhhhhceEEEeecc------
Q 048238 263 ESVQGFLSHCGWNSALES-------------ICAGVPILAWPIMADQPL-------NARMVTEEIKVALRVETC------ 316 (395)
Q Consensus 263 ~~~~~~IthgG~~s~~Ea-------------~~~GvP~i~~P~~~DQ~~-------na~~v~~~lg~g~~~~~~------ 316 (395)
+|+ .+|.-|-+||+.-. +.+-+|+++.|-+.+..+ |..++.+. |+-+.-...
T Consensus 79 aD~-~vVaPaTanTlaKiA~GiaDnLlt~~~~~~~~plviaPamn~~m~~~p~~~~Nl~~L~~~-G~~vv~P~~g~~ac~ 156 (390)
T TIGR00521 79 ADL-ILIAPATANTISKIAHGIADDLVSTTALAASAPIILAPAMNENMYNNPAVQENIKRLKDD-GYIFIEPDSGLLACG 156 (390)
T ss_pred cCE-EEEecCCHHHHHHHHcccCCcHHHHHHHHhCCCEEEEeCCChhhcCCHHHHHHHHHHHHC-CcEEECCCCcccccc
Confidence 443 46777777765432 344599999998654433 66677555 665543320
Q ss_pred CCCCcCccCHHHHHHHHHHHhC
Q 048238 317 DGSVRGFVKWQGLEKTVRELMG 338 (395)
Q Consensus 317 ~~~~~~~~~~~~l~~~i~~~l~ 338 (395)
+.+...-.+.++|...+.+.+.
T Consensus 157 ~~g~g~~~~~~~i~~~v~~~~~ 178 (390)
T TIGR00521 157 DEGKGRLAEPETIVKAAEREFS 178 (390)
T ss_pred cccCCCCCCHHHHHHHHHHHHh
Confidence 0011223567777777776653
No 315
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=21.13 E-value=3.5e+02 Score=20.05 Aligned_cols=36 Identities=17% Similarity=0.235 Sum_probs=23.4
Q ss_pred CeeEEEeccccc-CCHHHHHHHHHHHHhC--CCcEEEEE
Q 048238 193 SVMYVAFGSQAE-ISAQQLKEIATGLEQS--KVNFLWVI 228 (395)
Q Consensus 193 ~vv~vs~Gs~~~-~~~~~~~~l~~~l~~~--~~~~i~~~ 228 (395)
.+|+++.||... .....+..++..+++. +..+.+..
T Consensus 1 ~lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~ 39 (101)
T cd03409 1 GLLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGF 39 (101)
T ss_pred CEEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEE
Confidence 368999999865 4456777777777652 34444433
No 316
>PF08030 NAD_binding_6: Ferric reductase NAD binding domain; InterPro: IPR013121 This entry contains ferric reductase NAD binding proteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3A1F_A.
Probab=21.06 E-value=87 Score=25.74 Aligned_cols=39 Identities=26% Similarity=0.458 Sum_probs=27.8
Q ss_pred CeeEEEecccccCCHHHHHHHHHHHH-----hCCCcEEEEEcCC
Q 048238 193 SVMYVAFGSQAEISAQQLKEIATGLE-----QSKVNFLWVIRKA 231 (395)
Q Consensus 193 ~vv~vs~Gs~~~~~~~~~~~l~~~l~-----~~~~~~i~~~~~~ 231 (395)
.+++|+.|+-...-...+..++.... .....|+|+++..
T Consensus 3 ~vvlvAGG~GIt~~l~~l~~l~~~~~~~~~~~~~i~lvW~vR~~ 46 (156)
T PF08030_consen 3 NVVLVAGGSGITPILPILRDLLQRQNRGSSRTRRIKLVWVVRDA 46 (156)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHHHHTT-----EEEEEEEES-T
T ss_pred EEEEEecCcCHHHHHHHHHHHHHhhccccccccceEEEEeeCch
Confidence 58999999887666677777777666 2335899999875
No 317
>PRK13810 orotate phosphoribosyltransferase; Provisional
Probab=20.87 E-value=2.5e+02 Score=24.44 Aligned_cols=38 Identities=8% Similarity=0.080 Sum_probs=25.9
Q ss_pred HHHHHHHhcCCCccEEEECCch--hhHHHHHHHcCCCcEEE
Q 048238 16 PHFERALESLPHVSFMVSDGFL--WWTLDSANKFGFPRFVF 54 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~--~~~~~~A~~lgIP~i~~ 54 (395)
..+.+.+++. ++|.|+.=..- +.+..+|..+|+|++..
T Consensus 63 ~~la~~~~~~-~~d~I~g~~~~GiplA~~vA~~l~~p~v~v 102 (187)
T PRK13810 63 RQAALRIKEM-DVDTVAGVELGGVPLATAVSLETGLPLLIV 102 (187)
T ss_pred HHHHHHhccC-CCCEEEEEccchHHHHHHHHHHhCCCEEEE
Confidence 3344455555 89998875433 36666889999998865
No 318
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=20.85 E-value=1.3e+02 Score=25.17 Aligned_cols=42 Identities=7% Similarity=0.046 Sum_probs=29.0
Q ss_pred cHHHHHHHHhcCCCccEEEECCchh---hHHHHHHHcCCCcEEEec
Q 048238 14 MQPHFERALESLPHVSFMVSDGFLW---WTLDSANKFGFPRFVFYG 56 (395)
Q Consensus 14 ~~~~l~~~l~~~~kpD~vI~D~~~~---~~~~~A~~lgIP~i~~~~ 56 (395)
....+.+++++. +||+|+.-.... .+..+|..+|.|++.-..
T Consensus 78 ~a~~l~~~~~~~-~~~lVl~~~t~~g~~la~~lA~~L~~~~v~~v~ 122 (164)
T PF01012_consen 78 YADALAELIKEE-GPDLVLFGSTSFGRDLAPRLAARLGAPLVTDVT 122 (164)
T ss_dssp HHHHHHHHHHHH-T-SEEEEESSHHHHHHHHHHHHHHT-EEEEEEE
T ss_pred HHHHHHHHHHhc-CCCEEEEcCcCCCCcHHHHHHHHhCCCccceEE
Confidence 455667777776 899988776443 566688999999987655
No 319
>cd01977 Nitrogenase_VFe_alpha Nitrogenase_VFe_alpha -like: Nitrogenase VFe protein, alpha subunit like. This group contains proteins similar to the alpha subunits of, the VFe protein of the vanadium-dependent (V-) nitrogenase and the FeFe protein of the iron only (Fe-) nitrogenase Nitrogenase catalyzes the ATP-dependent reduction of dinitrogen (N2) to ammonia. In addition to V- and Fe- nitrogenases there is a molybdenum (Mo)-dependent nitrogenase which is the most widespread and best characterized of these systems. These systems consist of component 1 (VFe protein, FeFe protein or, MoFe protein respectively) and, component 2 (Fe protein). MoFe is an alpha2beta2 tetramer, V-and Fe- nitrogenases are alpha2beta2delta2 hexamers. The alpha and beta subunits of VFe and FeFe are similar to the alpha and beta subunits of MoFe. For MoFe each alphabeta pair contains one P-cluster (at the alphabeta interface) and, one molecule of iron molybdenum cofactor (FeMoco) contained within the alpha sub
Probab=20.84 E-value=92 Score=30.82 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=25.8
Q ss_pred HHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 17 HFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 17 ~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
.+.+.+++. +||+||.... ...+|+++|||++..
T Consensus 349 e~~~~~~~~-~pdliig~s~---~~~~a~~lgip~~~~ 382 (415)
T cd01977 349 EFFEILEML-KPDIILTGPR---VGELVKKLHVPYVNI 382 (415)
T ss_pred HHHHHHHhc-CCCEEEecCc---cchhhhhcCCCEEec
Confidence 455566777 9999997763 335899999999865
No 320
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=20.77 E-value=2.4e+02 Score=25.90 Aligned_cols=34 Identities=24% Similarity=0.139 Sum_probs=24.6
Q ss_pred HhcccCccceeecCCchh-----HHHHHhcCCcEEeccC
Q 048238 259 ILWHESVQGFLSHCGWNS-----ALESICAGVPILAWPI 292 (395)
Q Consensus 259 ll~~~~~~~~IthgG~~s-----~~Ea~~~GvP~i~~P~ 292 (395)
.+...|+-.+|++.|.+. +..|-..|.|+|++--
T Consensus 172 ~~~~~Dv~I~iS~sg~~~~~~~~~~~ak~~ga~iI~IT~ 210 (278)
T PRK11557 172 ALSPDDLLLAISYSGERRELNLAADEALRVGAKVLAITG 210 (278)
T ss_pred hCCCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEcC
Confidence 455666766999999764 4455668999999843
No 321
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.76 E-value=2.4e+02 Score=26.61 Aligned_cols=30 Identities=17% Similarity=0.149 Sum_probs=24.2
Q ss_pred cccCccceeecCCchhHHHHHhc----CCcEEeccC
Q 048238 261 WHESVQGFLSHCGWNSALESICA----GVPILAWPI 292 (395)
Q Consensus 261 ~~~~~~~~IthgG~~s~~Ea~~~----GvP~i~~P~ 292 (395)
..+++ +|+-||=||+.+++.. ++|++++..
T Consensus 56 ~~~d~--vi~~GGDGT~l~~~~~~~~~~~pv~gin~ 89 (305)
T PRK02645 56 ELIDL--AIVLGGDGTVLAAARHLAPHDIPILSVNV 89 (305)
T ss_pred cCcCE--EEEECCcHHHHHHHHHhccCCCCEEEEec
Confidence 34566 9999999999999763 789888854
No 322
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=20.72 E-value=1.3e+02 Score=27.18 Aligned_cols=39 Identities=18% Similarity=0.123 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCccEEEECCchh--hHHHHHHHc----CCCcEEEe
Q 048238 16 PHFERALESLPHVSFMVSDGFLW--WTLDSANKF----GFPRFVFY 55 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~~~--~~~~~A~~l----gIP~i~~~ 55 (395)
......++++ +||++|+-.=.. .+..-||++ |||+|+.+
T Consensus 50 ~~~~~~~~~~-~pDf~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~ 94 (277)
T PRK00994 50 EVVKKMLEEW-KPDFVIVISPNPAAPGPKKAREILKAAGIPCIVIG 94 (277)
T ss_pred HHHHHHHHhh-CCCEEEEECCCCCCCCchHHHHHHHhcCCCEEEEc
No 323
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.50 E-value=2.4e+02 Score=29.19 Aligned_cols=27 Identities=19% Similarity=0.227 Sum_probs=21.6
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.|- +++.+|...++|+|++.
T Consensus 68 ~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 68 VGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 4448888774 47889999999999884
No 324
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=20.46 E-value=3.3e+02 Score=27.04 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=37.4
Q ss_pred HhcHHHHHHHHhcCCCccEEEECCchh----hHHHHH---HHcCCCcEEEecchHHHH
Q 048238 12 KLMQPHFERALESLPHVSFMVSDGFLW----WTLDSA---NKFGFPRFVFYGMNNYVM 62 (395)
Q Consensus 12 ~~~~~~l~~~l~~~~kpD~vI~D~~~~----~~~~~A---~~lgIP~i~~~~~~~~~~ 62 (395)
+.+-+.+.+.|++. ..|.||..+.|. |+..++ ++.|||.|...+......
T Consensus 322 ~~~g~eIa~~Lk~d-gVDAvILtstCgtCtrcga~m~keiE~~GIPvV~i~~~~pI~~ 378 (431)
T TIGR01917 322 KQFAKEFSKELLAA-GVDAVILTSTUGTCTRCGATMVKEIERAGIPVVHICTVTPIAL 378 (431)
T ss_pred HHHHHHHHHHHHHc-CCCEEEEcCCCCcchhHHHHHHHHHHHcCCCEEEEeechhHHH
Confidence 45677788888887 999999986544 666666 557999999887765443
No 325
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=20.42 E-value=1.6e+02 Score=27.20 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHhcCCCccEEEE----------CCchh---hHHHHHHHcCCCcEEEe
Q 048238 18 FERALESLPHVSFMVS----------DGFLW---WTLDSANKFGFPRFVFY 55 (395)
Q Consensus 18 l~~~l~~~~kpD~vI~----------D~~~~---~~~~~A~~lgIP~i~~~ 55 (395)
+..++... +||+||+ |.+++ .++.-|..+|||.+.++
T Consensus 79 l~~~~~~~-~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S 128 (261)
T PRK13931 79 LYDVMKDA-PPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALS 128 (261)
T ss_pred HHHhcCCC-CCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEE
No 326
>cd01968 Nitrogenase_NifE_I Nitrogenase_NifE_I: a subgroup of the NifE subunit of the NifEN complex: NifE forms an alpha2beta2 tetramer with NifN. NifE and NifN are structurally homologous to nitrogenase MoFe protein alpha and beta subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The NifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this NifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco).
Probab=20.41 E-value=1.2e+02 Score=30.01 Aligned_cols=36 Identities=19% Similarity=0.258 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCCCccEEEECCchhhHHHHHHHcCCCcEEE
Q 048238 15 QPHFERALESLPHVSFMVSDGFLWWTLDSANKFGFPRFVF 54 (395)
Q Consensus 15 ~~~l~~~l~~~~kpD~vI~D~~~~~~~~~A~~lgIP~i~~ 54 (395)
...+.+.+++. +||++|... ....+|+++|||++..
T Consensus 345 ~~e~~~~i~~~-~pDl~ig~s---~~~~~a~~~gip~~~~ 380 (410)
T cd01968 345 PRELKKLLKEK-KADLLVAGG---KERYLALKLGIPFCDI 380 (410)
T ss_pred HHHHHHHHhhc-CCCEEEECC---cchhhHHhcCCCEEEc
Confidence 35667778887 999999885 3456899999998843
No 327
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=20.41 E-value=5.9e+02 Score=22.34 Aligned_cols=50 Identities=16% Similarity=0.092 Sum_probs=33.5
Q ss_pred CchHHHHHhhhccCCCCCeeEEEecccccCCHHHHHHHHHHHHhC-CCcEEEE
Q 048238 176 SKPAWIRWLDRKLDEGSSVMYVAFGSQAEISAQQLKEIATGLEQS-KVNFLWV 227 (395)
Q Consensus 176 ~~~~l~~~l~~~~~~~~~vv~vs~Gs~~~~~~~~~~~l~~~l~~~-~~~~i~~ 227 (395)
..+.+.+++.........++||...|. ...+....+.++++.. ++.+...
T Consensus 16 ~~~~l~~~l~~~~~~~~~i~~IptAs~--~~~~~~~~~~~a~~~l~G~~~~~~ 66 (212)
T cd03146 16 ALPAIDDLLLSLTKARPKVLFVPTASG--DRDEYTARFYAAFESLRGVEVSHL 66 (212)
T ss_pred chHHHHHHHHHhccCCCeEEEECCCCC--CHHHHHHHHHHHHhhccCcEEEEE
Confidence 355666666654112457888877777 3457778888899888 8776544
No 328
>TIGR01743 purR_Bsub pur operon repressor, Bacillus subtilis type. This model represents the puring operon repressor PurR of low-GC Gram-positive bacteria. This homodimeric repressor contains a large region homologous to phosphoribosyltransferases and is inhibited by 5-phosphoribosyl 1-pyrophosphate.
Probab=20.30 E-value=2.4e+02 Score=26.21 Aligned_cols=35 Identities=6% Similarity=0.060 Sum_probs=24.5
Q ss_pred HHHhcCCCccEEEECC--chhhHHHHHHHcCCCcEEEe
Q 048238 20 RALESLPHVSFMVSDG--FLWWTLDSANKFGFPRFVFY 55 (395)
Q Consensus 20 ~~l~~~~kpD~vI~D~--~~~~~~~~A~~lgIP~i~~~ 55 (395)
+.+++. ++|+|++=. -.+.+..+|+.+|+|++..-
T Consensus 122 ~~~~~~-~iD~VvgvetkGIpLA~avA~~L~vp~vivR 158 (268)
T TIGR01743 122 SVFAER-EIDAVMTVATKGIPLAYAVASVLNVPLVIVR 158 (268)
T ss_pred HHhcCC-CCCEEEEEccchHHHHHHHHHHHCCCEEEEE
Confidence 333444 799888643 34477779999999988763
No 329
>TIGR02720 pyruv_oxi_spxB pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name.
Probab=20.24 E-value=2.3e+02 Score=29.42 Aligned_cols=28 Identities=21% Similarity=0.190 Sum_probs=22.1
Q ss_pred ccceeecCCc------hhHHHHHhcCCcEEeccC
Q 048238 265 VQGFLSHCGW------NSALESICAGVPILAWPI 292 (395)
Q Consensus 265 ~~~~IthgG~------~s~~Ea~~~GvP~i~~P~ 292 (395)
.+++++|.|- +.+++|...++|+|++.-
T Consensus 64 ~gv~~~t~GPG~~n~~~~i~~A~~~~~Pvl~I~G 97 (575)
T TIGR02720 64 IGVCFGSAGPGATHLLNGLYDAKEDHVPVLALVG 97 (575)
T ss_pred ceEEEeCCCCcHHHHHHHHHHHhhcCCCEEEEec
Confidence 3448888874 578899999999999853
No 330
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=20.22 E-value=3.3e+02 Score=28.14 Aligned_cols=27 Identities=7% Similarity=0.258 Sum_probs=21.4
Q ss_pred ccceeecCCch------hHHHHHhcCCcEEecc
Q 048238 265 VQGFLSHCGWN------SALESICAGVPILAWP 291 (395)
Q Consensus 265 ~~~~IthgG~~------s~~Ea~~~GvP~i~~P 291 (395)
.+++++|.|-| .+.||...++|+|++-
T Consensus 79 ~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 79 PGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 34488887744 6889999999999884
No 331
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=20.10 E-value=1.2e+02 Score=24.59 Aligned_cols=36 Identities=28% Similarity=0.184 Sum_probs=21.8
Q ss_pred HHHHhcccCccceeecCCchhHHHHHhc----------CCcEEecc
Q 048238 256 QKEILWHESVQGFLSHCGWNSALESICA----------GVPILAWP 291 (395)
Q Consensus 256 q~~ll~~~~~~~~IthgG~~s~~Ea~~~----------GvP~i~~P 291 (395)
...+|-..+-..++.-||.||+.|.... .+|++++=
T Consensus 46 Rk~~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~ 91 (133)
T PF03641_consen 46 RKEIMIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLN 91 (133)
T ss_dssp HHHHHHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEE
T ss_pred HHHHHHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeC
Confidence 3445444444457778889999887442 34888765
No 332
>PRK03379 vitamin B12-transporter protein BtuF; Provisional
Probab=20.02 E-value=1.7e+02 Score=26.65 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCccEEEECCc-hh-hHHHHHHHcCCCcEEEecc
Q 048238 16 PHFERALESLPHVSFMVSDGF-LW-WTLDSANKFGFPRFVFYGM 57 (395)
Q Consensus 16 ~~l~~~l~~~~kpD~vI~D~~-~~-~~~~~A~~lgIP~i~~~~~ 57 (395)
+.++++++ . +||+||+... .. -...--++.|||++.+.+.
T Consensus 63 ~n~E~il~-l-~PDlVi~~~~~~~~~~~~~L~~~gi~v~~~~~~ 104 (260)
T PRK03379 63 MNLERIVA-L-KPDLVLAWRGGNAERQVDQLASLGIKVMWVDAT 104 (260)
T ss_pred CCHHHHHh-c-CCCEEEEecCCCcHHHHHHHHHCCCCEEEeCCC
Confidence 44555544 4 8999998542 11 2223346789999988643
Done!