Query 048242
Match_columns 430
No_of_seqs 140 out of 1249
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 07:42:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048242.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048242hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.1E-57 2.3E-62 436.5 38.6 393 8-429 4-406 (537)
2 KOG1177 Long chain fatty acid 100.0 8.4E-58 1.8E-62 409.0 33.4 390 16-427 46-457 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 3.2E-56 6.8E-61 440.3 41.2 384 15-429 6-399 (534)
4 PTZ00342 acyl-CoA synthetase; 100.0 3.4E-56 7.3E-61 449.9 37.6 393 14-430 55-570 (746)
5 PLN02614 long-chain acyl-CoA s 100.0 1E-55 2.2E-60 447.1 36.8 392 19-430 44-496 (666)
6 PLN02736 long-chain acyl-CoA s 100.0 8E-55 1.7E-59 441.5 39.8 391 17-430 41-487 (651)
7 COG1022 FAA1 Long-chain acyl-C 100.0 3E-55 6.5E-60 422.8 32.8 376 19-430 15-449 (613)
8 KOG1256 Long-chain acyl-CoA sy 100.0 4.7E-55 1E-59 415.3 30.9 394 17-430 72-527 (691)
9 PLN02861 long-chain-fatty-acid 100.0 2.5E-54 5.5E-59 437.3 37.2 392 18-430 41-493 (660)
10 PLN02387 long-chain-fatty-acid 100.0 3.2E-53 7E-58 431.0 36.4 392 18-428 56-528 (696)
11 PLN02479 acetate-CoA ligase 100.0 5E-52 1.1E-56 415.5 43.6 429 1-430 1-430 (567)
12 PRK07788 acyl-CoA synthetase; 100.0 1.5E-52 3.3E-57 418.1 39.5 371 20-422 49-422 (549)
13 COG0365 Acs Acyl-coenzyme A sy 100.0 9.6E-53 2.1E-57 400.2 35.3 366 25-428 14-394 (528)
14 PRK06334 long chain fatty acid 100.0 2.5E-52 5.4E-57 414.5 38.6 374 16-424 15-402 (539)
15 PLN03102 acyl-activating enzym 100.0 3.6E-51 7.7E-56 409.7 43.7 402 18-430 12-420 (579)
16 PF00501 AMP-binding: AMP-bind 100.0 5.2E-53 1.1E-57 407.8 28.9 370 26-429 1-386 (417)
17 PLN02860 o-succinylbenzoate-Co 100.0 6.7E-52 1.5E-56 414.2 37.5 393 16-428 3-411 (563)
18 PLN02430 long-chain-fatty-acid 100.0 4.2E-52 9E-57 420.4 36.2 392 18-430 40-493 (660)
19 PRK13295 cyclohexanecarboxylat 100.0 6.8E-51 1.5E-55 405.9 41.3 378 15-426 19-416 (547)
20 PTZ00216 acyl-CoA synthetase; 100.0 1.3E-51 2.8E-56 420.3 36.7 385 18-430 67-536 (700)
21 PRK07656 long-chain-fatty-acid 100.0 1.5E-50 3.2E-55 401.2 43.0 385 17-428 2-389 (513)
22 PRK08314 long-chain-fatty-acid 100.0 1.2E-50 2.6E-55 404.6 41.3 389 15-428 5-410 (546)
23 PRK07529 AMP-binding domain pr 100.0 2E-50 4.3E-55 407.8 42.8 388 15-427 20-441 (632)
24 PTZ00237 acetyl-CoA synthetase 100.0 7.3E-51 1.6E-55 411.1 39.5 387 21-428 60-488 (647)
25 PRK03640 O-succinylbenzoic aci 100.0 1.4E-50 3E-55 398.2 39.1 359 20-430 2-360 (483)
26 TIGR02316 propion_prpE propion 100.0 3.8E-50 8.2E-55 406.0 41.2 385 22-427 54-465 (628)
27 PRK06187 long-chain-fatty-acid 100.0 5.1E-50 1.1E-54 398.1 41.4 393 16-430 2-395 (521)
28 PRK08180 feruloyl-CoA synthase 100.0 2E-50 4.2E-55 407.1 38.5 374 17-430 36-440 (614)
29 PLN02654 acetate-CoA ligase 100.0 3.2E-50 6.9E-55 407.8 39.7 387 23-427 91-507 (666)
30 PLN02246 4-coumarate--CoA liga 100.0 1.2E-49 2.6E-54 396.3 41.8 379 19-428 22-409 (537)
31 PRK05605 long-chain-fatty-acid 100.0 9.6E-50 2.1E-54 400.0 41.5 391 18-430 30-445 (573)
32 PRK13382 acyl-CoA synthetase; 100.0 9.4E-50 2E-54 396.5 41.0 366 19-423 42-410 (537)
33 PRK06839 acyl-CoA synthetase; 100.0 7.6E-50 1.6E-54 394.4 39.9 367 21-430 3-371 (496)
34 PRK06087 short chain acyl-CoA 100.0 2.3E-49 4.9E-54 395.3 42.6 384 14-428 17-407 (547)
35 PRK06155 crotonobetaine/carnit 100.0 1.7E-49 3.7E-54 394.9 41.5 386 10-430 11-400 (542)
36 COG1021 EntE Peptide arylation 100.0 4.7E-51 1E-55 357.8 25.7 382 16-430 24-414 (542)
37 PRK09274 peptide synthase; Pro 100.0 4.2E-50 9.2E-55 401.0 35.8 381 18-427 4-412 (552)
38 PRK05677 long-chain-fatty-acid 100.0 2.3E-49 5E-54 396.0 41.0 385 20-428 24-430 (562)
39 PLN02574 4-coumarate--CoA liga 100.0 1.2E-49 2.6E-54 397.7 38.6 377 19-428 39-427 (560)
40 PRK04319 acetyl-CoA synthetase 100.0 1.1E-49 2.5E-54 398.9 38.4 376 22-430 45-432 (570)
41 PRK07786 long-chain-fatty-acid 100.0 1.9E-49 4.1E-54 395.1 39.8 380 18-430 15-399 (542)
42 TIGR03098 ligase_PEP_1 acyl-Co 100.0 3.2E-49 7E-54 391.7 40.7 378 21-428 1-380 (515)
43 PRK07470 acyl-CoA synthetase; 100.0 2.7E-49 5.8E-54 393.2 39.8 388 15-430 2-394 (528)
44 PRK08162 acyl-CoA synthetase; 100.0 1.3E-48 2.8E-53 389.8 44.6 403 16-430 14-416 (545)
45 PRK08316 acyl-CoA synthetase; 100.0 7E-49 1.5E-53 390.1 42.3 384 18-430 9-395 (523)
46 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.3E-49 7.1E-54 399.7 40.1 381 22-427 59-469 (625)
47 PRK00174 acetyl-CoA synthetase 100.0 4.3E-49 9.4E-54 399.4 40.3 379 23-427 70-477 (637)
48 PRK12467 peptide synthase; Pro 100.0 2.6E-50 5.7E-55 468.2 35.3 364 19-428 3094-3461(3956)
49 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.4E-48 3.1E-53 387.7 42.4 376 17-427 20-404 (527)
50 PRK12582 acyl-CoA synthetase; 100.0 2.2E-49 4.9E-54 400.1 37.3 377 14-430 43-452 (624)
51 PRK07769 long-chain-fatty-acid 100.0 3.4E-49 7.3E-54 399.8 38.3 379 18-428 19-444 (631)
52 PRK08315 AMP-binding domain pr 100.0 1.1E-48 2.4E-53 391.5 40.9 394 12-427 8-423 (559)
53 PRK05857 acyl-CoA synthetase; 100.0 3.4E-49 7.4E-54 392.7 36.2 382 15-430 9-402 (540)
54 PRK07008 long-chain-fatty-acid 100.0 2.1E-48 4.6E-53 387.1 41.7 388 18-421 8-403 (539)
55 PLN02330 4-coumarate--CoA liga 100.0 2E-48 4.2E-53 388.2 41.0 376 19-427 27-413 (546)
56 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2E-48 4.3E-53 387.6 40.8 372 19-424 21-412 (538)
57 PRK06188 acyl-CoA synthetase; 100.0 1.7E-48 3.7E-53 387.1 40.0 383 17-430 9-393 (524)
58 PRK07638 acyl-CoA synthetase; 100.0 1.6E-48 3.5E-53 383.7 38.7 359 20-430 1-361 (487)
59 PRK12476 putative fatty-acid-- 100.0 8E-49 1.7E-53 395.4 37.0 378 18-428 32-455 (612)
60 PRK10252 entF enterobactin syn 100.0 6.7E-49 1.5E-53 428.3 39.1 369 16-428 454-828 (1296)
61 PRK06145 acyl-CoA synthetase; 100.0 4.9E-48 1.1E-52 381.5 41.4 369 20-430 2-373 (497)
62 PRK10524 prpE propionyl-CoA sy 100.0 2.4E-48 5.3E-53 393.6 40.1 384 22-426 55-465 (629)
63 PRK06164 acyl-CoA synthetase; 100.0 3E-48 6.4E-53 386.8 40.0 392 16-428 6-403 (540)
64 PRK08633 2-acyl-glycerophospho 100.0 9E-49 2E-53 423.2 38.5 394 17-429 612-1014(1146)
65 TIGR03443 alpha_am_amid L-amin 100.0 1E-48 2.2E-53 428.3 38.8 390 20-428 236-647 (1389)
66 PRK08008 caiC putative crotono 100.0 1.1E-47 2.4E-52 380.7 41.5 379 20-428 7-395 (517)
67 PRK06018 putative acyl-CoA syn 100.0 1.1E-47 2.4E-52 382.4 41.7 388 17-419 7-401 (542)
68 PRK12492 long-chain-fatty-acid 100.0 6.2E-48 1.3E-52 385.7 39.9 387 19-428 23-438 (562)
69 PRK07514 malonyl-CoA synthase; 100.0 1.3E-47 2.9E-52 379.1 40.4 369 20-428 3-374 (504)
70 KOG1180 Acyl-CoA synthetase [L 100.0 3.7E-49 8E-54 359.3 26.6 397 15-430 36-513 (678)
71 PRK05620 long-chain-fatty-acid 100.0 1.9E-47 4E-52 383.4 41.1 392 17-423 7-406 (576)
72 PRK12583 acyl-CoA synthetase; 100.0 2.8E-47 6E-52 381.5 42.2 390 15-427 13-424 (558)
73 PRK07059 Long-chain-fatty-acid 100.0 2.4E-47 5.3E-52 381.4 41.5 388 17-427 20-431 (557)
74 PRK10946 entE enterobactin syn 100.0 1.7E-47 3.7E-52 380.4 39.5 374 17-428 22-406 (536)
75 PRK06060 acyl-CoA synthetase; 100.0 5.3E-48 1.2E-52 395.4 36.5 348 21-423 5-360 (705)
76 PRK05852 acyl-CoA synthetase; 100.0 8.6E-48 1.9E-52 382.7 36.5 384 19-430 15-408 (534)
77 PRK05691 peptide synthase; Val 100.0 3.8E-48 8.2E-53 453.9 38.6 369 19-428 3719-4092(4334)
78 PRK12467 peptide synthase; Pro 100.0 3.5E-48 7.5E-53 450.6 37.9 374 10-428 502-880 (3956)
79 TIGR02262 benz_CoA_lig benzoat 100.0 4.8E-47 1E-51 375.3 40.1 374 22-430 6-384 (508)
80 PRK12316 peptide synthase; Pro 100.0 4.6E-48 9.9E-53 456.2 38.2 363 19-428 510-877 (5163)
81 PRK03584 acetoacetyl-CoA synth 100.0 7.6E-47 1.6E-51 384.0 40.9 366 32-424 96-487 (655)
82 TIGR03205 pimA dicarboxylate-- 100.0 1.7E-46 3.7E-51 373.9 42.3 390 18-429 19-420 (541)
83 PRK06710 long-chain-fatty-acid 100.0 1.2E-46 2.6E-51 376.9 40.7 390 18-430 22-431 (563)
84 PRK08751 putative long-chain f 100.0 1.4E-46 3.1E-51 376.2 41.3 386 19-427 24-433 (560)
85 PRK06178 acyl-CoA synthetase; 100.0 1.6E-46 3.5E-51 376.2 41.6 395 19-430 32-442 (567)
86 PRK13388 acyl-CoA synthetase; 100.0 8.7E-47 1.9E-51 375.3 39.2 363 20-430 3-380 (540)
87 PRK07867 acyl-CoA synthetase; 100.0 1.8E-46 4E-51 371.9 41.0 363 19-430 4-381 (529)
88 PRK12316 peptide synthase; Pro 100.0 1.2E-47 2.6E-52 452.7 37.8 366 19-428 2002-2371(5163)
89 PRK13383 acyl-CoA synthetase; 100.0 7.7E-47 1.7E-51 374.3 37.2 353 18-421 33-390 (516)
90 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.8E-46 3.8E-51 379.9 39.8 383 16-424 80-488 (652)
91 PRK09088 acyl-CoA synthetase; 100.0 7.9E-47 1.7E-51 371.9 36.3 351 27-428 2-358 (488)
92 PLN03052 acetate--CoA ligase; 100.0 1.6E-46 3.4E-51 382.0 39.3 372 24-420 179-573 (728)
93 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.4E-46 3E-51 371.7 37.3 362 21-427 1-367 (502)
94 PRK05691 peptide synthase; Val 100.0 1.7E-47 3.6E-52 448.5 35.3 369 11-428 1122-1495(4334)
95 PRK08043 bifunctional acyl-[ac 100.0 7.4E-47 1.6E-51 387.3 34.5 364 18-421 202-574 (718)
96 PRK08974 long-chain-fatty-acid 100.0 1.2E-45 2.6E-50 369.4 42.1 389 19-430 22-432 (560)
97 PRK05851 long-chain-fatty-acid 100.0 1.1E-46 2.3E-51 373.6 32.2 362 22-424 4-394 (525)
98 PRK08279 long-chain-acyl-CoA s 100.0 3.9E-45 8.5E-50 368.4 40.8 376 16-427 33-429 (600)
99 PRK04813 D-alanine--poly(phosp 100.0 1.9E-45 4.1E-50 363.8 35.2 363 20-427 2-369 (503)
100 PRK13390 acyl-CoA synthetase; 100.0 5.7E-45 1.2E-49 359.8 36.9 358 28-427 5-373 (501)
101 PRK05850 acyl-CoA synthetase; 100.0 4.6E-45 9.9E-50 366.6 36.0 374 21-428 2-423 (578)
102 PRK07787 acyl-CoA synthetase; 100.0 5.4E-45 1.2E-49 357.0 35.6 336 30-428 10-347 (471)
103 PRK07798 acyl-CoA synthetase; 100.0 3.5E-44 7.6E-49 357.3 41.6 375 20-428 3-402 (533)
104 PRK13391 acyl-CoA synthetase; 100.0 2.4E-44 5.3E-49 356.1 38.2 366 26-428 3-378 (511)
105 PRK12406 long-chain-fatty-acid 100.0 8.1E-44 1.7E-48 352.3 37.3 364 37-429 3-378 (509)
106 TIGR01733 AA-adenyl-dom amino 100.0 3.4E-44 7.4E-49 345.3 33.5 338 47-428 1-344 (408)
107 PRK09192 acyl-CoA synthetase; 100.0 4.1E-44 8.8E-49 359.3 34.4 389 1-427 4-435 (579)
108 PRK06814 acylglycerophosphoeth 100.0 1.6E-43 3.4E-48 381.2 39.3 366 19-423 630-1002(1140)
109 KOG1179 Very long-chain acyl-C 100.0 1.1E-43 2.5E-48 324.9 32.2 384 15-427 72-478 (649)
110 PRK08276 long-chain-fatty-acid 100.0 1.7E-43 3.7E-48 349.5 34.4 356 37-429 3-367 (502)
111 PRK09029 O-succinylbenzoic aci 100.0 9.2E-43 2E-47 340.2 33.2 324 22-426 4-328 (458)
112 PRK07768 long-chain-fatty-acid 100.0 2E-42 4.3E-47 345.2 34.6 365 21-424 3-408 (545)
113 TIGR01923 menE O-succinylbenzo 100.0 1.2E-41 2.5E-46 330.6 31.8 318 47-428 1-318 (436)
114 PRK07445 O-succinylbenzoic aci 100.0 1.6E-42 3.5E-47 336.2 25.6 301 45-421 19-320 (452)
115 PRK07868 acyl-CoA synthetase; 100.0 8.9E-41 1.9E-45 350.6 39.8 358 17-412 444-819 (994)
116 PLN03051 acyl-activating enzym 100.0 4.2E-41 9.1E-46 331.4 30.6 319 77-420 1-339 (499)
117 PTZ00297 pantothenate kinase; 100.0 1.3E-38 2.8E-43 334.8 34.8 363 18-427 425-843 (1452)
118 PRK08308 acyl-CoA synthetase; 100.0 8.2E-39 1.8E-43 308.1 30.5 288 38-410 1-289 (414)
119 KOG1175 Acyl-CoA synthetase [L 100.0 7.5E-38 1.6E-42 299.0 29.1 372 26-423 70-465 (626)
120 COG1020 EntF Non-ribosomal pep 100.0 6.7E-35 1.4E-39 296.5 34.5 361 19-428 226-593 (642)
121 TIGR03089 conserved hypothetic 100.0 8.5E-28 1.8E-32 209.7 22.7 218 26-285 2-227 (227)
122 PRK07824 O-succinylbenzoic aci 99.9 2.2E-25 4.8E-30 210.5 21.6 192 192-423 32-228 (358)
123 KOG3628 Predicted AMP-binding 99.9 4.6E-23 1E-27 201.7 27.9 379 19-418 769-1196(1363)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 8.1E-22 1.8E-26 190.1 19.1 200 193-410 73-281 (422)
125 TIGR02372 4_coum_CoA_lig 4-cou 99.9 2.5E-21 5.5E-26 182.4 16.4 148 196-351 96-247 (386)
126 TIGR03335 F390_ftsA coenzyme F 99.9 1.2E-20 2.7E-25 182.2 18.4 196 192-410 83-286 (445)
127 COG1541 PaaK Coenzyme F390 syn 99.7 1.8E-16 3.8E-21 146.2 17.8 199 192-409 87-293 (438)
128 KOG3628 Predicted AMP-binding 99.7 4E-16 8.6E-21 153.7 17.6 391 6-427 80-555 (1363)
129 KOG1178 Non-ribosomal peptide 99.7 3.7E-16 8E-21 158.1 16.0 307 21-356 37-375 (1032)
130 TIGR02304 aden_form_hyp probab 99.1 1.4E-09 3.1E-14 103.3 13.7 148 197-354 101-256 (430)
131 PF04443 LuxE: Acyl-protein sy 98.5 7.2E-06 1.6E-10 76.4 15.8 196 192-410 86-311 (365)
132 COG1541 PaaK Coenzyme F390 syn 96.2 0.056 1.2E-06 51.2 11.1 94 44-138 108-203 (438)
133 TIGR02155 PA_CoA_ligase phenyl 90.7 2.3 5.1E-05 41.0 10.5 89 44-133 93-183 (422)
134 TIGR03335 F390_ftsA coenzyme F 90.7 2.7 5.8E-05 41.0 10.8 83 44-129 104-188 (445)
135 PLN02736 long-chain acyl-CoA s 82.8 30 0.00064 35.7 13.7 100 213-318 77-180 (651)
136 TIGR03089 conserved hypothetic 82.6 8.3 0.00018 33.6 8.3 76 34-118 149-226 (227)
137 PRK07656 long-chain-fatty-acid 81.3 13 0.00029 36.6 10.4 85 44-132 184-270 (513)
138 PF00501 AMP-binding: AMP-bind 80.3 21 0.00045 34.2 11.0 88 193-289 8-99 (417)
139 PRK02261 methylaspartate mutas 78.3 32 0.00069 27.3 10.6 102 237-344 5-120 (137)
140 KOG1177 Long chain fatty acid 77.5 41 0.00088 32.7 11.2 93 32-129 231-336 (596)
141 PRK08315 AMP-binding domain pr 77.3 25 0.00055 35.2 11.0 83 44-129 217-301 (559)
142 PLN03052 acetate--CoA ligase; 76.1 39 0.00084 35.4 12.1 98 193-292 188-289 (728)
143 COG0031 CysK Cysteine synthase 75.6 39 0.00085 30.7 10.3 62 63-125 54-116 (300)
144 PRK06187 long-chain-fatty-acid 74.7 34 0.00073 33.8 11.1 85 44-132 185-270 (521)
145 PRK12583 acyl-CoA synthetase; 74.4 37 0.0008 34.0 11.3 83 44-129 219-303 (558)
146 PRK06334 long chain fatty acid 73.6 38 0.00083 33.9 11.1 98 33-133 181-289 (539)
147 PLN02565 cysteine synthase 72.7 59 0.0013 30.1 11.2 70 57-126 52-122 (322)
148 PTZ00342 acyl-CoA synthetase; 71.8 45 0.00098 35.1 11.3 101 213-319 90-208 (746)
149 PTZ00237 acetyl-CoA synthetase 71.7 57 0.0012 33.6 12.1 79 212-291 90-172 (647)
150 PLN02387 long-chain-fatty-acid 71.3 49 0.0011 34.5 11.5 101 213-319 105-209 (696)
151 TIGR03590 PseG pseudaminic aci 70.6 63 0.0014 29.2 10.8 98 44-157 10-112 (279)
152 PRK11761 cysM cysteine synthas 70.5 66 0.0014 29.4 10.9 87 36-125 28-117 (296)
153 TIGR02370 pyl_corrinoid methyl 69.2 71 0.0015 27.1 11.3 89 237-328 86-183 (197)
154 TIGR01733 AA-adenyl-dom amino 69.1 58 0.0013 30.9 10.9 98 34-134 119-228 (408)
155 TIGR01923 menE O-succinylbenzo 68.8 39 0.00084 32.5 9.7 82 44-131 129-211 (436)
156 PRK07788 acyl-CoA synthetase; 68.3 69 0.0015 32.0 11.7 85 214-299 74-162 (549)
157 PRK04319 acetyl-CoA synthetase 67.6 54 0.0012 33.0 10.8 86 44-132 223-310 (570)
158 TIGR03098 ligase_PEP_1 acyl-Co 67.4 39 0.00084 33.4 9.6 85 44-132 179-264 (515)
159 TIGR02188 Ac_CoA_lig_AcsA acet 67.2 72 0.0016 32.6 11.7 96 193-292 70-169 (625)
160 PLN02614 long-chain acyl-CoA s 67.0 1.6E+02 0.0034 30.5 14.1 86 213-299 78-167 (666)
161 PLN02654 acetate-CoA ligase 66.9 80 0.0017 32.7 12.0 80 212-292 118-201 (666)
162 PLN03051 acyl-activating enzym 65.9 45 0.00098 32.9 9.7 85 44-131 137-222 (499)
163 PRK08316 acyl-CoA synthetase; 65.7 68 0.0015 31.7 11.0 85 213-298 35-123 (523)
164 PLN02556 cysteine synthase/L-3 65.5 80 0.0017 29.9 10.6 62 64-125 103-165 (368)
165 PRK09274 peptide synthase; Pro 65.1 87 0.0019 31.3 11.7 79 212-291 39-121 (552)
166 PRK07798 acyl-CoA synthetase; 64.6 1.2E+02 0.0026 30.0 12.5 87 213-300 27-117 (533)
167 PRK00174 acetyl-CoA synthetase 64.5 85 0.0018 32.2 11.6 96 193-292 80-179 (637)
168 PRK03584 acetoacetyl-CoA synth 63.8 99 0.0021 31.9 12.0 94 194-292 98-195 (655)
169 TIGR01217 ac_ac_CoA_syn acetoa 63.5 96 0.0021 32.0 11.8 78 213-291 113-194 (652)
170 PLN03102 acyl-activating enzym 63.0 47 0.001 33.6 9.3 81 214-295 39-123 (579)
171 TIGR01139 cysK cysteine syntha 62.7 1.2E+02 0.0026 27.6 11.1 66 61-127 47-113 (298)
172 PLN02861 long-chain-fatty-acid 62.5 99 0.0021 32.0 11.7 86 213-299 76-165 (660)
173 PLN02860 o-succinylbenzoate-Co 62.5 80 0.0017 31.8 10.9 97 33-133 170-276 (563)
174 KOG1250 Threonine/serine dehyd 62.5 1.4E+02 0.0031 28.3 13.8 64 75-139 118-181 (457)
175 PRK06164 acyl-CoA synthetase; 62.2 77 0.0017 31.6 10.6 96 34-133 180-285 (540)
176 PRK03640 O-succinylbenzoic aci 61.7 89 0.0019 30.5 10.8 85 44-132 159-244 (483)
177 cd01445 TST_Repeats Thiosulfat 61.3 29 0.00062 27.5 5.9 41 56-96 81-124 (138)
178 PLN02246 4-coumarate--CoA liga 60.9 96 0.0021 30.9 11.1 84 213-297 49-136 (537)
179 KOG1176 Acyl-CoA synthetase [L 60.5 45 0.00097 33.4 8.2 89 212-301 43-137 (537)
180 PRK06188 acyl-CoA synthetase; 60.5 93 0.002 30.8 10.8 84 44-131 186-269 (524)
181 PLN03013 cysteine synthase 60.5 1.3E+02 0.0028 29.2 11.0 66 61-126 164-230 (429)
182 PRK08308 acyl-CoA synthetase; 60.3 1.2E+02 0.0025 29.1 11.2 85 44-132 119-205 (414)
183 TIGR02316 propion_prpE propion 59.9 1.3E+02 0.0028 30.8 12.0 94 194-291 66-163 (628)
184 PRK13295 cyclohexanecarboxylat 59.4 1E+02 0.0022 30.9 10.9 95 194-292 38-136 (547)
185 TIGR00936 ahcY adenosylhomocys 59.3 1.5E+02 0.0032 28.5 11.1 69 59-127 21-91 (406)
186 PRK05677 long-chain-fatty-acid 58.8 98 0.0021 31.1 10.7 82 213-295 48-134 (562)
187 PRK06839 acyl-CoA synthetase; 58.6 1.3E+02 0.0028 29.5 11.4 85 212-297 25-114 (496)
188 TIGR01136 cysKM cysteine synth 58.6 1.5E+02 0.0032 27.1 11.0 65 61-126 48-113 (299)
189 PRK07529 AMP-binding domain pr 58.5 95 0.0021 31.8 10.7 95 193-290 38-136 (632)
190 PRK06155 crotonobetaine/carnit 58.2 86 0.0019 31.4 10.2 84 214-298 46-133 (542)
191 PRK08314 long-chain-fatty-acid 57.7 75 0.0016 31.7 9.7 84 214-298 35-123 (546)
192 PRK05857 acyl-CoA synthetase; 57.6 95 0.0021 31.0 10.4 80 213-293 40-123 (540)
193 cd02069 methionine_synthase_B1 57.4 61 0.0013 27.9 7.7 96 236-336 89-196 (213)
194 PRK10524 prpE propionyl-CoA sy 56.5 1.6E+02 0.0035 30.1 12.0 95 193-291 66-164 (629)
195 PRK08008 caiC putative crotono 56.4 1.7E+02 0.0037 28.9 11.9 82 214-296 37-122 (517)
196 PRK07514 malonyl-CoA synthase; 56.0 88 0.0019 30.7 9.8 85 212-297 26-114 (504)
197 PRK07476 eutB threonine dehydr 55.9 1E+02 0.0023 28.5 9.5 59 75-133 71-129 (322)
198 PRK05850 acyl-CoA synthetase; 55.9 1.8E+02 0.0039 29.3 12.1 83 213-297 34-123 (578)
199 KOG0023 Alcohol dehydrogenase, 54.8 95 0.0021 28.6 8.4 76 61-139 173-248 (360)
200 PRK13388 acyl-CoA synthetase; 54.2 1.5E+02 0.0032 29.6 11.1 83 214-297 26-113 (540)
201 PRK05605 long-chain-fatty-acid 54.0 89 0.0019 31.5 9.6 83 214-297 57-143 (573)
202 TIGR02262 benz_CoA_lig benzoat 53.8 1.3E+02 0.0027 29.8 10.5 84 44-129 179-264 (508)
203 PRK07638 acyl-CoA synthetase; 53.8 99 0.0021 30.3 9.7 86 44-133 161-247 (487)
204 PLN00011 cysteine synthase 53.0 1.2E+02 0.0025 28.2 9.3 65 61-126 58-124 (323)
205 PF08734 GYD: GYD domain; Int 52.7 87 0.0019 22.7 7.3 64 51-114 18-91 (91)
206 COG0399 WecE Predicted pyridox 52.7 66 0.0014 30.4 7.6 64 56-123 60-128 (374)
207 cd01561 CBS_like CBS_like: Thi 52.2 1.8E+02 0.004 26.3 11.0 66 61-127 43-109 (291)
208 PRK06381 threonine synthase; V 52.1 84 0.0018 29.0 8.3 88 36-129 32-121 (319)
209 PLN02330 4-coumarate--CoA liga 52.1 1.3E+02 0.0029 30.0 10.4 83 213-296 54-140 (546)
210 PRK08751 putative long-chain f 51.6 1.1E+02 0.0023 30.8 9.6 81 214-295 50-135 (560)
211 cd02070 corrinoid_protein_B12- 51.6 1.5E+02 0.0033 25.2 11.0 88 236-326 83-179 (201)
212 COG1064 AdhP Zn-dependent alco 51.1 75 0.0016 29.6 7.5 61 61-125 158-218 (339)
213 PRK08276 long-chain-fatty-acid 50.7 1.3E+02 0.0029 29.5 10.1 84 213-297 10-97 (502)
214 PRK11493 sseA 3-mercaptopyruva 50.7 29 0.00063 31.4 4.9 53 44-96 200-257 (281)
215 PLN02550 threonine dehydratase 50.6 2.9E+02 0.0063 28.1 12.5 89 36-129 125-215 (591)
216 PRK06087 short chain acyl-CoA 50.5 1.3E+02 0.0028 30.1 10.0 77 213-290 48-128 (547)
217 cd06448 L-Ser-dehyd Serine deh 50.5 92 0.002 28.7 8.2 62 64-126 45-106 (316)
218 PRK05620 long-chain-fatty-acid 50.5 1.7E+02 0.0036 29.6 10.8 88 44-132 199-287 (576)
219 PRK08043 bifunctional acyl-[ac 50.3 1.5E+02 0.0033 31.0 10.7 83 44-129 383-467 (718)
220 PF03321 GH3: GH3 auxin-respon 50.3 8.2 0.00018 38.5 1.3 31 192-222 77-108 (528)
221 PRK07059 Long-chain-fatty-acid 50.1 1.1E+02 0.0025 30.6 9.6 82 213-295 47-132 (557)
222 PRK13391 acyl-CoA synthetase; 49.9 1.9E+02 0.0042 28.5 11.1 96 193-296 10-109 (511)
223 PRK07470 acyl-CoA synthetase; 49.8 1.9E+02 0.004 28.7 11.0 88 44-132 181-269 (528)
224 PRK13383 acyl-CoA synthetase; 49.6 1.3E+02 0.0027 29.9 9.7 83 214-297 60-146 (516)
225 PLN02574 4-coumarate--CoA liga 49.6 2E+02 0.0044 28.9 11.3 83 214-297 66-153 (560)
226 TIGR02379 ECA_wecE TDP-4-keto- 49.5 68 0.0015 30.5 7.4 57 63-123 64-125 (376)
227 cd01449 TST_Repeat_2 Thiosulfa 49.4 42 0.0009 25.4 5.0 40 56-95 64-103 (118)
228 PLN02479 acetate-CoA ligase 48.2 2.2E+02 0.0047 28.7 11.3 81 214-295 45-129 (567)
229 PRK10717 cysteine synthase A; 48.1 2.3E+02 0.005 26.3 11.0 64 62-126 55-119 (330)
230 COG1022 FAA1 Long-chain acyl-C 47.9 1.9E+02 0.0041 29.6 10.3 100 31-134 187-296 (613)
231 PRK08279 long-chain-acyl-CoA s 47.9 1.8E+02 0.0039 29.5 10.7 82 44-129 217-300 (600)
232 cd00640 Trp-synth-beta_II Tryp 47.9 1.9E+02 0.0042 25.3 11.1 93 35-129 15-108 (244)
233 TIGR01138 cysM cysteine syntha 47.8 2.2E+02 0.0047 25.9 11.2 63 62-125 50-113 (290)
234 PRK09088 acyl-CoA synthetase; 47.7 2.3E+02 0.005 27.7 11.2 78 214-292 22-103 (488)
235 COG2236 Predicted phosphoribos 47.4 33 0.00071 29.0 4.2 33 44-76 5-37 (192)
236 PRK08162 acyl-CoA synthetase; 47.1 1.2E+02 0.0027 30.2 9.3 83 214-297 43-129 (545)
237 TIGR01137 cysta_beta cystathio 46.6 1.4E+02 0.0031 29.1 9.3 89 36-126 27-117 (454)
238 TIGR03208 cyc_hxne_CoA_lg cycl 46.5 2.2E+02 0.0048 28.3 11.0 79 213-292 52-134 (538)
239 PRK11706 TDP-4-oxo-6-deoxy-D-g 46.3 86 0.0019 29.7 7.6 55 65-123 66-125 (375)
240 TIGR02035 D_Ser_am_lyase D-ser 46.2 1.6E+02 0.0034 28.7 9.2 64 73-136 154-217 (431)
241 PRK06178 acyl-CoA synthetase; 46.2 1.5E+02 0.0032 29.8 9.7 84 214-298 58-145 (567)
242 PRK07008 long-chain-fatty-acid 45.5 1.6E+02 0.0035 29.3 9.8 87 44-132 194-282 (539)
243 PRK08633 2-acyl-glycerophospho 45.3 1.9E+02 0.0041 32.1 11.1 96 33-131 780-886 (1146)
244 PF01041 DegT_DnrJ_EryC1: DegT 45.2 65 0.0014 30.4 6.5 64 56-123 51-119 (363)
245 PRK06382 threonine dehydratase 44.9 1.9E+02 0.0041 27.8 9.7 55 75-129 77-131 (406)
246 PRK12492 long-chain-fatty-acid 44.8 1.2E+02 0.0025 30.6 8.7 80 213-293 48-132 (562)
247 PLN02356 phosphateglycerate ki 44.4 1.7E+02 0.0037 28.3 9.0 63 61-124 94-157 (423)
248 COG1171 IlvA Threonine dehydra 44.2 2.2E+02 0.0048 26.6 9.4 64 75-138 78-141 (347)
249 PLN02723 3-mercaptopyruvate su 43.9 46 0.00099 30.8 5.1 52 45-96 238-295 (320)
250 TIGR02275 DHB_AMP_lig 2,3-dihy 43.7 2.3E+02 0.0051 28.0 10.6 95 33-131 181-287 (527)
251 COG0318 CaiC Acyl-CoA syntheta 43.6 2.7E+02 0.006 27.8 11.1 78 214-292 38-119 (534)
252 TIGR01734 D-ala-DACP-lig D-ala 43.5 2.5E+02 0.0054 27.5 10.7 85 44-131 159-246 (502)
253 PRK08813 threonine dehydratase 43.3 2.9E+02 0.0062 26.0 10.4 57 74-130 84-140 (349)
254 PRK10252 entF enterobactin syn 43.3 2E+02 0.0044 32.5 11.0 96 33-131 596-703 (1296)
255 TIGR03443 alpha_am_amid L-amin 43.1 1.8E+02 0.004 33.2 10.7 97 193-290 249-349 (1389)
256 PRK05852 acyl-CoA synthetase; 43.0 3.4E+02 0.0075 26.9 11.7 87 44-133 194-283 (534)
257 PRK12406 long-chain-fatty-acid 42.9 1.7E+02 0.0037 28.8 9.5 84 214-298 11-98 (509)
258 COG0365 Acs Acyl-coenzyme A sy 42.8 2.2E+02 0.0047 28.5 9.8 83 213-297 39-126 (528)
259 PRK10946 entE enterobactin syn 42.4 2.2E+02 0.0048 28.4 10.2 85 44-132 200-287 (536)
260 cd01519 RHOD_HSP67B2 Member of 42.4 62 0.0013 23.8 4.9 53 44-96 36-92 (106)
261 PRK07787 acyl-CoA synthetase; 42.1 2.9E+02 0.0062 26.9 10.8 84 44-132 146-231 (471)
262 PRK13382 acyl-CoA synthetase; 41.9 2E+02 0.0044 28.7 9.8 81 214-295 68-152 (537)
263 PLN02247 indole-3-acetic acid- 41.3 34 0.00073 34.6 4.0 28 193-220 87-115 (606)
264 PRK09162 hypoxanthine-guanine 41.2 81 0.0018 26.3 5.8 47 43-90 14-60 (181)
265 TIGR01501 MthylAspMutase methy 40.9 1.8E+02 0.0039 23.0 8.6 94 246-345 13-119 (134)
266 COG1223 Predicted ATPase (AAA+ 40.7 64 0.0014 28.8 5.0 60 22-84 199-267 (368)
267 cd06447 D-Ser-dehyd D-Serine d 40.4 1.8E+02 0.0038 28.0 8.5 61 73-133 136-196 (404)
268 PRK13237 tyrosine phenol-lyase 40.3 3.5E+02 0.0076 26.5 10.4 69 44-117 76-174 (460)
269 PRK06018 putative acyl-CoA syn 40.1 2E+02 0.0043 28.7 9.5 85 213-298 38-126 (542)
270 cd02067 B12-binding B12 bindin 40.0 1.6E+02 0.0035 22.2 9.5 86 246-336 11-104 (119)
271 PLN02249 indole-3-acetic acid- 39.7 16 0.00035 37.0 1.5 29 192-220 97-126 (597)
272 cd01562 Thr-dehyd Threonine de 39.6 2.1E+02 0.0045 26.0 8.8 56 75-130 69-124 (304)
273 PRK07786 long-chain-fatty-acid 39.5 3.1E+02 0.0066 27.4 10.8 82 214-296 42-127 (542)
274 PF09153 DUF1938: Domain of un 39.0 87 0.0019 22.1 4.5 40 37-80 16-62 (86)
275 PLN02430 long-chain-fatty-acid 39.0 3.1E+02 0.0068 28.3 10.9 100 214-318 76-179 (660)
276 PRK13390 acyl-CoA synthetase; 39.0 3.8E+02 0.0083 26.2 11.4 79 213-292 23-105 (501)
277 PRK09192 acyl-CoA synthetase; 38.7 2.6E+02 0.0056 28.2 10.2 86 212-298 47-143 (579)
278 KOG1179 Very long-chain acyl-C 38.4 1.3E+02 0.0029 30.0 7.2 76 45-125 261-339 (649)
279 COG0379 NadA Quinolinate synth 38.0 1.9E+02 0.0041 26.5 7.7 24 20-43 108-131 (324)
280 PRK12582 acyl-CoA synthetase; 37.8 1.7E+02 0.0036 30.0 8.6 78 213-291 79-165 (624)
281 PRK10696 tRNA 2-thiocytidine b 37.7 2.9E+02 0.0064 24.5 9.5 71 55-125 13-95 (258)
282 PRK15407 lipopolysaccharide bi 37.6 2.9E+02 0.0064 26.9 9.8 55 66-124 107-166 (438)
283 cd01563 Thr-synth_1 Threonine 37.1 1.9E+02 0.0041 26.7 8.2 59 70-129 70-128 (324)
284 TIGR03595 Obg_CgtA_exten Obg f 36.8 38 0.00082 23.1 2.6 19 58-76 45-63 (69)
285 PRK12483 threonine dehydratase 36.5 2.9E+02 0.0063 27.7 9.6 62 74-135 88-149 (521)
286 PRK10595 SOS cell division inh 36.4 1.6E+02 0.0034 24.2 6.4 15 109-123 98-112 (164)
287 KOG1180 Acyl-CoA synthetase [L 36.3 4.2E+02 0.0091 26.7 10.1 100 214-319 89-193 (678)
288 PF00818 Ice_nucleation: Ice n 35.4 17 0.00036 16.7 0.4 9 340-348 1-9 (16)
289 TIGR01747 diampropi_NH3ly diam 35.3 2.1E+02 0.0046 27.2 8.2 59 71-129 94-152 (376)
290 TIGR01127 ilvA_1Cterm threonin 35.2 3.2E+02 0.0069 25.9 9.6 56 74-129 51-106 (380)
291 COG2885 OmpA Outer membrane pr 35.0 1.1E+02 0.0023 25.8 5.6 57 19-76 98-160 (190)
292 COG4009 Uncharacterized protei 34.9 1.4E+02 0.003 20.9 4.9 67 44-121 8-77 (88)
293 KOG1138 Predicted cleavage and 34.8 71 0.0015 31.1 4.7 70 58-127 406-476 (653)
294 TIGR01124 ilvA_2Cterm threonin 34.7 4.6E+02 0.0099 26.1 10.6 54 75-128 69-122 (499)
295 cd02070 corrinoid_protein_B12- 34.6 2.9E+02 0.0062 23.5 11.2 99 41-139 46-158 (201)
296 PRK06721 threonine synthase; R 34.3 2.5E+02 0.0054 26.4 8.5 56 74-129 78-134 (352)
297 PRK05638 threonine synthase; V 34.3 2.2E+02 0.0047 27.8 8.3 59 74-132 115-173 (442)
298 PRK07768 long-chain-fatty-acid 34.2 4.1E+02 0.009 26.4 10.7 93 34-129 151-258 (545)
299 PRK02991 D-serine dehydratase; 34.1 2.5E+02 0.0053 27.5 8.5 62 73-134 159-220 (441)
300 PRK06710 long-chain-fatty-acid 33.9 2.2E+02 0.0047 28.6 8.7 80 214-294 49-132 (563)
301 PRK06814 acylglycerophosphoeth 33.8 4.4E+02 0.0094 29.4 11.7 96 33-131 791-897 (1140)
302 PRK08974 long-chain-fatty-acid 33.3 2.4E+02 0.0052 28.3 8.9 80 214-294 48-132 (560)
303 PRK11658 UDP-4-amino-4-deoxy-L 33.3 1.7E+02 0.0037 27.7 7.4 59 60-122 63-126 (379)
304 cd07050 BMC_EutL_repeat2 ethan 33.2 83 0.0018 22.1 3.6 40 59-98 3-43 (87)
305 PRK07867 acyl-CoA synthetase; 33.1 3.4E+02 0.0073 27.0 9.8 81 214-295 28-113 (529)
306 PLN02409 serine--glyoxylate am 33.0 2.8E+02 0.006 26.6 8.8 74 50-124 39-114 (401)
307 PF09269 DUF1967: Domain of un 32.9 43 0.00094 22.8 2.4 30 47-76 34-63 (69)
308 cd02067 B12-binding B12 bindin 32.5 1.9E+02 0.004 21.9 6.2 51 89-139 22-75 (119)
309 PF01297 TroA: Periplasmic sol 32.3 2E+02 0.0043 25.4 7.2 86 48-135 127-217 (256)
310 cd00615 Orn_deC_like Ornithine 32.3 2.8E+02 0.006 25.1 8.3 55 67-124 96-161 (294)
311 PRK05851 long-chain-fatty-acid 32.0 4.5E+02 0.0097 26.1 10.5 90 33-125 150-253 (525)
312 PF00291 PALP: Pyridoxal-phosp 31.8 3.5E+02 0.0075 24.5 9.0 56 70-126 56-111 (306)
313 PRK12476 putative fatty-acid-- 31.7 5.7E+02 0.012 26.0 12.5 83 213-296 67-155 (612)
314 PF13580 SIS_2: SIS domain; PD 31.6 1.2E+02 0.0026 23.9 5.1 53 48-100 81-136 (138)
315 PRK08638 threonine dehydratase 31.5 4.3E+02 0.0093 24.6 9.5 61 74-134 78-138 (333)
316 PF07994 NAD_binding_5: Myo-in 31.1 3.9E+02 0.0085 24.4 8.8 76 47-124 127-232 (295)
317 PRK06060 acyl-CoA synthetase; 31.0 3.1E+02 0.0068 28.5 9.5 81 214-295 30-114 (705)
318 PRK08526 threonine dehydratase 31.0 4.3E+02 0.0094 25.4 9.6 62 75-136 72-133 (403)
319 TIGR03588 PseC UDP-4-keto-6-de 31.0 2.6E+02 0.0055 26.5 8.2 65 56-123 55-127 (380)
320 PRK09224 threonine dehydratase 30.6 4E+02 0.0088 26.5 9.6 60 74-133 71-130 (504)
321 COG1611 Predicted Rossmann fol 30.6 2.3E+02 0.005 24.3 6.9 70 34-108 14-84 (205)
322 PRK08198 threonine dehydratase 30.5 4.4E+02 0.0096 25.2 9.7 60 75-134 74-133 (404)
323 TIGR00067 glut_race glutamate 30.4 2.9E+02 0.0064 24.5 7.8 55 24-82 12-73 (251)
324 TIGR02326 transamin_PhnW 2-ami 30.0 2.7E+02 0.006 26.0 8.2 74 52-125 34-109 (363)
325 PRK07409 threonine synthase; V 29.5 2.8E+02 0.006 26.0 8.0 56 74-129 81-137 (353)
326 cd01448 TST_Repeat_1 Thiosulfa 29.4 1.4E+02 0.0031 22.5 5.2 41 56-96 65-106 (122)
327 PLN02970 serine racemase 29.4 4.6E+02 0.01 24.3 9.8 55 75-129 79-133 (328)
328 PRK09029 O-succinylbenzoic aci 28.8 3.6E+02 0.0078 26.1 9.1 78 214-292 28-109 (458)
329 PRK06702 O-acetylhomoserine am 28.8 2.6E+02 0.0056 27.2 7.7 51 75-125 80-133 (432)
330 PLN02238 hypoxanthine phosphor 28.5 1.6E+02 0.0034 24.8 5.5 22 44-65 10-31 (189)
331 TIGR01279 DPOR_bchN light-inde 28.4 4.8E+02 0.01 25.1 9.5 91 22-125 261-351 (407)
332 PRK02261 methylaspartate mutas 28.3 3E+02 0.0065 21.7 8.7 57 82-138 19-78 (137)
333 PRK04813 D-alanine--poly(phosp 28.1 3E+02 0.0066 26.9 8.5 77 214-291 27-107 (503)
334 cd02069 methionine_synthase_B1 27.8 4E+02 0.0086 23.0 10.9 98 42-139 51-164 (213)
335 PRK06110 hypothetical protein; 27.7 4.9E+02 0.011 24.0 10.2 63 74-136 73-135 (322)
336 COG0796 MurI Glutamate racemas 27.4 3.9E+02 0.0085 24.0 7.9 57 24-84 19-81 (269)
337 PRK00865 glutamate racemase; P 27.4 3.6E+02 0.0079 24.0 8.0 54 24-81 19-78 (261)
338 PRK07769 long-chain-fatty-acid 27.3 6.8E+02 0.015 25.5 12.8 82 213-295 54-141 (631)
339 PF00389 2-Hacid_dh: D-isomer 27.2 1E+02 0.0022 24.0 4.0 73 262-342 19-91 (133)
340 COG0436 Aspartate/tyrosine/aro 27.1 5E+02 0.011 24.8 9.3 90 55-156 99-203 (393)
341 TIGR03765 ICE_PFL_4695 integra 27.1 2.1E+02 0.0045 21.5 5.1 96 18-126 7-102 (105)
342 TIGR03205 pimA dicarboxylate-- 27.0 3.6E+02 0.0077 26.8 8.9 77 214-291 46-126 (541)
343 PTZ00216 acyl-CoA synthetase; 26.9 6.7E+02 0.015 26.1 11.0 89 211-300 118-210 (700)
344 TIGR00640 acid_CoA_mut_C methy 26.7 3.1E+02 0.0068 21.4 7.4 86 246-336 14-107 (132)
345 PRK05939 hypothetical protein; 26.6 5.7E+02 0.012 24.5 10.1 56 67-124 83-138 (397)
346 cd06451 AGAT_like Alanine-glyo 26.6 3.7E+02 0.0081 24.9 8.4 19 324-342 305-324 (356)
347 PF11072 DUF2859: Protein of u 26.6 2E+02 0.0044 22.9 5.4 100 14-126 41-140 (142)
348 TIGR02991 ectoine_eutB ectoine 26.5 5.1E+02 0.011 23.8 9.5 55 75-129 71-125 (317)
349 PRK07591 threonine synthase; V 26.5 3.7E+02 0.0081 26.0 8.4 88 36-129 106-195 (421)
350 PRK06352 threonine synthase; V 26.4 4E+02 0.0087 25.0 8.4 55 75-129 79-134 (351)
351 TIGR03528 2_3_DAP_am_ly diamin 26.4 3.6E+02 0.0077 25.9 8.1 57 73-129 115-171 (396)
352 PRK08180 feruloyl-CoA synthase 26.2 3.2E+02 0.0069 27.9 8.4 79 212-291 67-154 (614)
353 cd02071 MM_CoA_mut_B12_BD meth 26.1 3E+02 0.0065 21.0 11.3 86 246-336 11-104 (122)
354 cd01529 4RHOD_Repeats Member o 26.1 2.5E+02 0.0054 20.1 6.1 49 44-95 33-81 (96)
355 PRK09331 Sep-tRNA:Cys-tRNA syn 25.7 5.4E+02 0.012 24.4 9.4 55 67-124 99-165 (387)
356 PRK08197 threonine synthase; V 25.6 4E+02 0.0087 25.5 8.4 55 74-128 130-184 (394)
357 COG1167 ARO8 Transcriptional r 25.5 3.8E+02 0.0083 26.3 8.4 83 205-293 150-236 (459)
358 TIGR02370 pyl_corrinoid methyl 25.4 4.2E+02 0.009 22.4 11.4 98 42-139 48-160 (197)
359 TIGR01203 HGPRTase hypoxanthin 25.1 2.2E+02 0.0048 23.3 5.7 42 46-88 3-45 (166)
360 TIGR00715 precor6x_red precorr 25.0 3.4E+02 0.0074 24.2 7.2 54 70-126 150-206 (256)
361 TIGR00260 thrC threonine synth 25.0 3.9E+02 0.0084 24.7 8.1 57 73-129 73-130 (328)
362 PTZ00297 pantothenate kinase; 24.7 7.2E+02 0.016 28.7 11.0 98 213-319 456-556 (1452)
363 cd01016 TroA Metal binding pro 24.7 4.3E+02 0.0093 23.7 8.0 63 70-134 160-227 (276)
364 PRK08329 threonine synthase; V 24.6 5.9E+02 0.013 23.8 10.4 66 59-128 96-161 (347)
365 TIGR02822 adh_fam_2 zinc-bindi 24.4 2.8E+02 0.0062 25.5 7.1 75 45-123 138-215 (329)
366 cd01137 PsaA Metal binding pro 24.4 4.5E+02 0.0097 23.8 8.1 85 49-133 153-242 (287)
367 PRK07048 serine/threonine dehy 24.4 5.6E+02 0.012 23.6 8.9 53 75-127 76-128 (321)
368 COG2897 SseA Rhodanese-related 24.4 1.6E+02 0.0035 26.7 5.1 55 44-98 202-262 (285)
369 smart00450 RHOD Rhodanese Homo 24.2 2.1E+02 0.0045 20.1 5.1 40 57-96 43-82 (100)
370 TIGR03366 HpnZ_proposed putati 24.2 4.8E+02 0.01 23.3 8.4 78 44-125 92-173 (280)
371 TIGR02372 4_coum_CoA_lig 4-cou 24.2 6.3E+02 0.014 24.1 13.4 107 19-131 79-198 (386)
372 PRK11070 ssDNA exonuclease Rec 24.0 7.8E+02 0.017 25.1 10.6 74 46-125 50-135 (575)
373 PRK08206 diaminopropionate amm 23.9 4.2E+02 0.009 25.5 8.1 62 73-134 118-179 (399)
374 PRK08246 threonine dehydratase 23.7 5.7E+02 0.012 23.4 9.6 61 69-130 67-127 (310)
375 PRK07824 O-succinylbenzoic aci 23.6 4.9E+02 0.011 24.1 8.6 86 28-118 28-125 (358)
376 PRK09177 xanthine-guanine phos 23.6 2.6E+02 0.0056 22.6 5.8 36 44-81 8-43 (156)
377 PLN02620 indole-3-acetic acid- 23.4 63 0.0014 32.8 2.5 30 193-222 99-129 (612)
378 PRK10287 thiosulfate:cyanide s 23.3 3.1E+02 0.0067 20.4 5.7 48 44-98 41-88 (104)
379 TIGR02080 O_succ_thio_ly O-suc 23.3 4E+02 0.0086 25.4 7.9 17 331-347 315-332 (382)
380 PRK06815 hypothetical protein; 22.9 6E+02 0.013 23.4 9.2 55 75-129 72-126 (317)
381 PRK07868 acyl-CoA synthetase; 22.8 5.7E+02 0.012 28.1 9.9 81 214-297 472-555 (994)
382 PRK06145 acyl-CoA synthetase; 22.7 7.2E+02 0.016 24.2 11.0 84 44-131 167-252 (497)
383 KOG1256 Long-chain acyl-CoA sy 22.7 8.8E+02 0.019 25.2 14.1 140 194-340 89-234 (691)
384 COG1021 EntE Peptide arylation 22.6 5.8E+02 0.013 24.6 8.2 100 215-324 54-166 (542)
385 COG4821 Uncharacterized protei 22.5 1.6E+02 0.0034 25.1 4.2 55 51-126 85-140 (243)
386 PF00156 Pribosyltran: Phospho 22.1 2.5E+02 0.0053 21.2 5.3 26 45-70 4-29 (125)
387 PRK11493 sseA 3-mercaptopyruva 22.0 2E+02 0.0044 25.9 5.4 43 54-96 71-114 (281)
388 cd02072 Glm_B12_BD B12 binding 21.8 4E+02 0.0086 20.9 8.0 87 246-336 11-110 (128)
389 PF04122 CW_binding_2: Putativ 21.8 3.1E+02 0.0067 19.6 7.8 68 52-122 9-77 (92)
390 TIGR00623 sula cell division i 21.6 3.1E+02 0.0066 22.7 5.6 77 44-123 33-116 (168)
391 PRK09629 bifunctional thiosulf 21.5 1.8E+02 0.0039 29.8 5.3 42 55-96 208-249 (610)
392 PRK08574 cystathionine gamma-s 21.3 4.2E+02 0.0091 25.2 7.6 17 332-348 319-336 (385)
393 PLN02723 3-mercaptopyruvate su 21.3 1.9E+02 0.0041 26.7 5.2 41 56-96 89-130 (320)
394 cd01019 ZnuA Zinc binding prot 21.1 6.2E+02 0.013 22.9 9.5 86 48-135 156-246 (286)
395 KOG0025 Zn2+-binding dehydroge 21.1 6.5E+02 0.014 23.1 10.0 111 225-342 150-263 (354)
396 PRK07334 threonine dehydratase 21.1 4.4E+02 0.0096 25.3 7.8 55 75-129 75-129 (403)
397 PRK13479 2-aminoethylphosphona 21.0 5E+02 0.011 24.2 8.1 76 48-125 35-111 (368)
398 PF08967 DUF1884: Domain of un 20.9 3.2E+02 0.0069 19.4 5.6 65 50-130 9-73 (85)
399 PRK11823 DNA repair protein Ra 20.7 8E+02 0.017 24.0 9.5 85 65-158 75-166 (446)
400 KOG0025 Zn2+-binding dehydroge 20.5 2.9E+02 0.0064 25.2 5.7 64 66-129 157-221 (354)
401 cd00401 AdoHcyase S-adenosyl-L 20.2 7.9E+02 0.017 23.8 11.1 70 58-127 24-95 (413)
402 COG1205 Distinct helicase fami 20.2 5.5E+02 0.012 27.6 8.7 54 263-317 147-201 (851)
403 PRK06260 threonine synthase; V 20.2 5.7E+02 0.012 24.5 8.3 88 36-129 84-174 (397)
404 KOG0257 Kynurenine aminotransf 20.1 7.9E+02 0.017 23.7 8.8 100 22-123 45-144 (420)
405 PF07722 Peptidase_C26: Peptid 20.0 99 0.0021 26.7 2.8 31 87-117 30-60 (217)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-57 Score=436.49 Aligned_cols=393 Identities=35% Similarity=0.531 Sum_probs=325.8
Q ss_pred CcCCCCCCCCCCCCHHHHHHHHHhhCCCc-ceEEECC---eeeeHHHHHHHHHHHHHHHHHcC--CCCCCeEEEEcCCch
Q 048242 8 DDLPKNPANFTALTPLWFLERAATVHPTR-KSVVYES---KHYTWQQTYQRCRRLASALSQLS--IGPGTAVSVLSPNVP 81 (430)
Q Consensus 8 ~~~~~~~~~~~~~t~~~~l~~~~~~~p~~-~a~~~~~---~~~Ty~el~~~~~~la~~L~~~g--v~~g~~V~i~~~n~~ 81 (430)
+.....+.+..+.+....+.+....++++ +++++.. +.+||+|++.++.++|..|.++| +++||+|++++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~ 83 (537)
T KOG1176|consen 4 EKLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTP 83 (537)
T ss_pred cccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCH
Confidence 33444455666666666666666666666 7787755 99999999999999999999875 899999999999999
Q ss_pred hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCC
Q 048242 82 AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDR 161 (430)
Q Consensus 82 ~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 161 (430)
++.++++||+++|+++.++||.+.+.++.+.++.++++++|++.+.+..+.++..... ..++.+.......
T Consensus 84 ~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---------~~i~~l~~~~~~~ 154 (537)
T KOG1176|consen 84 EFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---------LKIIVLTGDEGVI 154 (537)
T ss_pred HHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---------CceEEEecccCcc
Confidence 9999999999999999999999999999999999999999999999998887765432 4444444331110
Q ss_pred CcccccccCCccc-hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEE
Q 048242 162 APLEYALSKGVTE-YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYL 240 (430)
Q Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 240 (430)
.. ........ +.++.....+.. ..+...+|++.|+|||||||.||||++||++++.+.......+.....++.+
T Consensus 155 ~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l 229 (537)
T KOG1176|consen 155 SI---SDLVEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYL 229 (537)
T ss_pred cc---ccccccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEE
Confidence 00 00011111 444444444443 4567789999999999999999999999999999988888888888899999
Q ss_pred eccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 241 WTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 241 ~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
+.+|++|.+|+...+.+++.|++.+++ +.|++..+++.+++|++|+++++|.++..+.+.+...+.+ ++++|.+.+||
T Consensus 230 ~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~-l~sl~~v~~gg 308 (537)
T KOG1176|consen 230 CTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYD-LSSLRSVLSGG 308 (537)
T ss_pred EechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCccc-CCccEEEEecC
Confidence 999999999999988866665555555 6789999999999999999999999999999998666677 99999999999
Q ss_pred CCCCHHHHHHHH-hcC-cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 320 SPPPPPILLAMS-QKG-FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 320 ~~l~~~~~~~~~-~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
+++++++.++++ +++ ..+.++||+||+++.++.+...++ .+.+++|++++++ +++|.++. |+.+++
T Consensus 309 a~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~e~-g~~l~~ 376 (537)
T KOG1176|consen 309 APLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLDET-GVSLGP 376 (537)
T ss_pred CCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeCCC-CCCCCC
Confidence 999999999998 667 899999999999988888765432 4669999999987 66666655 999999
Q ss_pred CCCceeEEEEecCcccccccCCcccchHhhhC
Q 048242 398 DGKTIGEVVMRGNMVMKGYLKNPKANEEAFAN 429 (430)
Q Consensus 398 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~d 429 (430)
+ +.||||+||+++++|||+||++|++.|+|
T Consensus 377 ~--~~GEI~vrg~~imkGY~~NpeaT~~~~~~ 406 (537)
T KOG1176|consen 377 N--QTGEICVRGPQVMKGYLKNPEATKEAFDD 406 (537)
T ss_pred C--CceEEEEECcccchhhcCChHHHHhhccc
Confidence 8 88999999999999999999999999965
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=8.4e-58 Score=409.02 Aligned_cols=390 Identities=20% Similarity=0.252 Sum_probs=338.9
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhc
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYE--SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMT 93 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 93 (430)
+....|+++.++..++.-||+.|+++. +.++||+||...++++|.+|..+|+++||+|+++.||+.+|+..+|||+++
T Consensus 46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 556789999999999999999999984 577999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCChhhHHHHHhhcCceEEEecccc-----HHHHHHHHHHhhccC------CCCCCCCeEEEecCCCCCCC
Q 048242 94 GAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY-----FALAEEALKIMEGKS------EGLFKPPVLIVIGDETCDRA 162 (430)
Q Consensus 94 G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~~~~~~~ 162 (430)
|.+.+++||.+...+++..|++.+++++|+.+.+ ++.+.++........ ..++....+|..++..
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~---- 201 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDH---- 201 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCC----
Confidence 9999999999999999999999999999998643 445555555444322 1345566677666321
Q ss_pred cccccccCCccchhhhhhcCCCCCCC-----CCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCC
Q 048242 163 PLEYALSKGVTEYEKLLETGDPEFAW-----KPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGA 237 (430)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~ 237 (430)
...|.+.++|++..+..+... .....++|.+.|.|||||||.|||+.+||.|++++......++++.+++
T Consensus 202 -----~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~ 276 (596)
T KOG1177|consen 202 -----PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKH 276 (596)
T ss_pred -----cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcce
Confidence 346778888888776654221 1235679999999999999999999999999999999999999999999
Q ss_pred EEEeccCchhhhhhH-HHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEE
Q 048242 238 VYLWTLPIFHGNGWC-FTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNV 315 (430)
Q Consensus 238 ~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v 315 (430)
++.+..|+||.+|.. ..+.++..|+++|++ +.|++...+++|+++++|.++++|++|..+++.+.....+ ++++|..
T Consensus 277 ~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~-~s~lr~~ 355 (596)
T KOG1177|consen 277 RICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVD-LSSLRKG 355 (596)
T ss_pred EEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCc-hhhhhhh
Confidence 999999999999966 577888899999996 5799999999999999999999999999999999888888 9999999
Q ss_pred eecCCCCCHHHHHHHH-hcCcE-EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCC
Q 048242 316 NTGGSPPPPPILLAMS-QKGFR-VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQ 393 (430)
Q Consensus 316 ~~~G~~l~~~~~~~~~-~~~~~-v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~ 393 (430)
+.||+++|+++.+.+. +.++. +...||+||++...++.... +...+...++|+.+++. +..|+|.+ |.
T Consensus 356 vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~--------D~~~~~~ksVG~~m~h~-Ea~iv~~~-g~ 425 (596)
T KOG1177|consen 356 VIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLG--------DPPEERIKSVGHLMDHY-EAAIVDKD-GS 425 (596)
T ss_pred eeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCC--------CCHHHHHhhhhhccccc-ccccccCC-CC
Confidence 9999999999999998 55655 78899999999888877654 33455678999999999 99999977 99
Q ss_pred CCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 394 PIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 394 ~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
.++.+ ..|||++||.++|.|||++++.|.+..
T Consensus 426 ~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti 457 (596)
T KOG1177|consen 426 EVPLG--TKGELLIRGYSTMLGYWGEEEKTKETI 457 (596)
T ss_pred ccccC--CCceEEEEechhheeecCCcccchhhc
Confidence 99999 789999999999999999999887654
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-56 Score=440.33 Aligned_cols=384 Identities=29% Similarity=0.400 Sum_probs=318.8
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECCee--eeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYESKH--YTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~--~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
......++.+++.+.++.+|+++|+++.+.. +||+||.++++++|+.|.+.|+++||+|+|+++|++++++++|||++
T Consensus 6 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~ 85 (534)
T COG0318 6 RMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALR 85 (534)
T ss_pred cccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4456789999999999999999999998876 99999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
+|++++|++|.++..++.++++.++++.++++.+............+ ....+......... ..
T Consensus 86 ~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---------~~- 148 (534)
T COG0318 86 AGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP-------VVLVVLLVGDADDR---------LP- 148 (534)
T ss_pred cCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC-------cceEEEeccccccc---------cc-
Confidence 99999999999999999999999999999999884444443332111 11222222211100 00
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC--CCCCCEEEeccCchhhhh
Q 048242 173 TEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG--MKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~pl~h~~g 250 (430)
..+.+................++++++++|||||||.||||++||+|++.+.......+. ++.+|++++++|+||.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~G 228 (534)
T COG0318 149 ITLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFG 228 (534)
T ss_pred ccHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHH
Confidence 244554333322222222367899999999999999999999999999999898888888 899999999999999999
Q ss_pred hHHHHHH-HhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCc-eeEEeecCCCCCHHH
Q 048242 251 WCFTWSL-AALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPH-VVNVNTGGSPPPPPI 326 (430)
Q Consensus 251 l~~~~~~-l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~-lr~v~~~G~~l~~~~ 326 (430)
+...+.+ ++.|+++++.+ .|++..++..+.++++|+++++|+++..++........+ +++ ||.++.||+++++++
T Consensus 229 l~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~-~~~~lr~~~~gg~~~~~~~ 307 (534)
T COG0318 229 LIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDD-LSSSLRLVLSGGAPLPPEL 307 (534)
T ss_pred HHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccc-cccceEEEEecCCcCCHHH
Confidence 9976666 77788888887 599999999999999999999999999999988777665 565 999999999999999
Q ss_pred HHHHH-hcC-cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeE
Q 048242 327 LLAMS-QKG-FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGE 404 (430)
Q Consensus 327 ~~~~~-~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Ge 404 (430)
.++++ .++ ..+.+.||+||+++.++.+...+ ...+.+++|+|++++ +++|+|++.++++| | ++||
T Consensus 308 ~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGe 374 (534)
T COG0318 308 LERFEERFGPIAILEGYGLTETSPVVTINPPDD---------LLAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGE 374 (534)
T ss_pred HHHHHHHhCCCceEEeecccccCceeecCCCch---------hhhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceE
Confidence 99999 666 57999999999987777654331 023557789999999 99999998555666 5 7999
Q ss_pred EEEecCcccccccCCcccchHhhhC
Q 048242 405 VVMRGNMVMKGYLKNPKANEEAFAN 429 (430)
Q Consensus 405 l~v~g~~v~~gY~~~~~~t~~~f~d 429 (430)
|+++||+++.|||++|+.|++.|.+
T Consensus 375 i~irgp~v~~GY~~~pe~t~~~f~~ 399 (534)
T COG0318 375 IWVRGPNVMKGYWNRPEATAEAFDE 399 (534)
T ss_pred EEEECchhhhhhcCChHHHHHhhcc
Confidence 9999999999999999999998864
No 4
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-56 Score=449.88 Aligned_cols=393 Identities=17% Similarity=0.211 Sum_probs=308.6
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCcceEEEC-----CeeeeHHHHHHHHHHHHHHHHH---cCCCCC-----------CeEE
Q 048242 14 PANFTALTPLWFLERAATVHPTRKSVVYE-----SKHYTWQQTYQRCRRLASALSQ---LSIGPG-----------TAVS 74 (430)
Q Consensus 14 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~-----~~~~Ty~el~~~~~~la~~L~~---~gv~~g-----------~~V~ 74 (430)
.+.+...|+.++|.+.++.+|+++|+++. .+++||+|+.+++.++|+.|.+ +|+++| |+|+
T Consensus 55 ~~~~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~ 134 (746)
T PTZ00342 55 SSLYVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLG 134 (746)
T ss_pred ccccccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEE
Confidence 44455789999999999999999999973 2689999999999999999997 499998 8999
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEe
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVI 154 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 154 (430)
|+++|+++|+++.+||+++|++++|+++.++++++.+++++++++++|++.+....+.+.....+ ..+.++.+
T Consensus 135 i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~-------~l~~ii~~ 207 (746)
T PTZ00342 135 LYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP-------HLKKLIIL 207 (746)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC-------CceEEEEE
Confidence 99999999999999999999999999999999999999999999999998776665554433333 55677777
Q ss_pred cCCCCCC-----------------Ccc------------------------cc--------------c--ccCCccchhh
Q 048242 155 GDETCDR-----------------APL------------------------EY--------------A--LSKGVTEYEK 177 (430)
Q Consensus 155 ~~~~~~~-----------------~~~------------------------~~--------------~--~~~~~~~~~~ 177 (430)
++..... ... .+ . .......|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 287 (746)
T PTZ00342 208 DTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDD 287 (746)
T ss_pred CCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHH
Confidence 6521110 000 00 0 0000112333
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc--CCCCCCEEEeccCchhhhhhHHHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW--GMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
........ .......++|++.|+|||||||.||||++||+|+++++....... .....+++++.+|++|++++...+
T Consensus 288 ~~~~~~~~-~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~ 366 (746)
T PTZ00342 288 MTKNKTTN-YKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAY 366 (746)
T ss_pred HHhhcccC-CCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHH
Confidence 32221111 111234679999999999999999999999999988876654332 233568999999999999998888
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcC--------CCCCC----------------------
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNA--------PPEDT---------------------- 305 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~--------~~~~~---------------------- 305 (430)
.+++.|+++++.+. ++..+++.|+++++|+++++|.+|+++... +....
T Consensus 367 ~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 445 (746)
T PTZ00342 367 LSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFL 445 (746)
T ss_pred HHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHH
Confidence 88889999988865 899999999999999999999999999752 10000
Q ss_pred ------------CCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhcc
Q 048242 306 ------------ILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNA 372 (430)
Q Consensus 306 ------------~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
.. .++||.+++||+++++++.++++ .+|++++++||+||+++.++.+... ....+
T Consensus 446 ~~~~~v~~kir~~l-g~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~g 513 (746)
T PTZ00342 446 EGITHISSKIKDKV-NPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTE 513 (746)
T ss_pred HHHHHHHHHHHHhh-CCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcc
Confidence 01 26899999999999999999998 6799999999999997766554321 12458
Q ss_pred ccCCcc-ccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh-CC
Q 048242 373 RQGVKC-MCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA-NG 430 (430)
Q Consensus 373 ~vG~~~-~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~-dg 430 (430)
++|+|+ |++ +++|+|.+++.....+ +.|||+++||++|.|||++|++|+++|. ||
T Consensus 514 svG~p~~pg~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dG 570 (746)
T PTZ00342 514 SIGGPISPNT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDG 570 (746)
T ss_pred cccCcCCCcE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCC
Confidence 999998 999 9999986545555544 5799999999999999999999999994 65
No 5
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1e-55 Score=447.15 Aligned_cols=392 Identities=17% Similarity=0.215 Sum_probs=300.3
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHH
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE----S-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFG 89 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA 89 (430)
..|+.++|++.++.+|+++|+.+. + +++||+||.++++++|+.|.++|+++||+|+|+++|+++|++++||
T Consensus 44 ~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA 123 (666)
T PLN02614 44 MDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEA 123 (666)
T ss_pred CCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 458999999999999999999842 1 3589999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccccc
Q 048242 90 VPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALS 169 (430)
Q Consensus 90 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (430)
|+++|++++|++|.++++++.++++.++++++|++.+....+....... ......++.+++.............
T Consensus 124 ~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~------~~~l~~vi~~~~~~~~~~~~~~~~~ 197 (666)
T PLN02614 124 CNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNS------TEYMKTVVSFGGVSREQKEEAETFG 197 (666)
T ss_pred HHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccc------cccceEEEEeCCCChHHhhhhhhcC
Confidence 9999999999999999999999999999999999876543332211100 0023456665432100000000000
Q ss_pred CCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc-----CCCCCCEEEeccC
Q 048242 170 KGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW-----GMKEGAVYLWTLP 244 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p 244 (430)
....++.+++..............++|+++|+|||||||.||||++||+|+...+.+....+ +++.+|++++.+|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lP 277 (666)
T PLN02614 198 LVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLP 277 (666)
T ss_pred cEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEecc
Confidence 11345666654332211111234678999999999999999999999999988777655443 5678999999999
Q ss_pred chhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC---------------------
Q 048242 245 IFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--------------------- 303 (430)
Q Consensus 245 l~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--------------------- 303 (430)
++|.+++...+.++..|+++++.+ +++..+++.|++++||+++++|.+++.+......
T Consensus 278 l~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~ 356 (666)
T PLN02614 278 LAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKF 356 (666)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999876666777899888775 6899999999999999999999999988642100
Q ss_pred ------------CC-----------CCCCCceeEEeecCCCCCHHHHHHHHhc-CcEEEeeecCccccccccccccCCCC
Q 048242 304 ------------DT-----------ILPLPHVVNVNTGGSPPPPPILLAMSQK-GFRVTHVYGLSEINGPATVCAWNPNW 359 (430)
Q Consensus 304 ------------~~-----------~~~l~~lr~v~~~G~~l~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~ 359 (430)
.. ..-.++||.+++||+++++++.+.++.+ +++++++||+||+++.++.....+
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-- 434 (666)
T PLN02614 357 GNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPDE-- 434 (666)
T ss_pred HHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeecccc--
Confidence 00 0001689999999999998875555566 589999999999876544322110
Q ss_pred CCCChhhhhhhccccCCccccccceEEeeC-C-CCCCCCCCCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 360 DSLPFEAQARLNARQGVKCMCLEGLDVLDT-K-TNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 360 ~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~-~-~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
..+.+++|+|+|++ +++|+|. + .+++++.| +.|||+|+||++|.|||++|++|++.|.||
T Consensus 435 --------~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~dG 496 (666)
T PLN02614 435 --------LDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLIDG 496 (666)
T ss_pred --------CCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhccC
Confidence 12348999999999 9999983 3 24778877 899999999999999999999999999775
No 6
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8e-55 Score=441.54 Aligned_cols=391 Identities=21% Similarity=0.219 Sum_probs=310.2
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEE---CC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHH
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVY---ES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVH 87 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~---~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~ 87 (430)
....++.++|++.++.+|+++|+.+ .+ +++||+||.++++++|+.|+++|+++||+|+|+++|+++|++++
T Consensus 41 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~ 120 (651)
T PLN02736 41 PEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVD 120 (651)
T ss_pred CCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHH
Confidence 3456899999999999999999953 11 56999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 88 FGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 88 lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
+||+++|++++|+++.++.+++.++++.++++++|++.+....+.......+ ..+.++.+++...........
T Consensus 121 lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~ 193 (651)
T PLN02736 121 HACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP-------SVRLIVVVGGADEPLPSLPSG 193 (651)
T ss_pred HHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC-------CceEEEEECCCchhhhhhhcc
Confidence 9999999999999999999999999999999999999876665554433222 445566554321100000000
Q ss_pred ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchh
Q 048242 168 LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFH 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h 247 (430)
.......|++++..............++++++|+|||||||.||||++||+++..++.+....+++..+|++++.+|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 194 TGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAH 273 (651)
T ss_pred CCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHH
Confidence 11123566666654322221223356799999999999999999999999999999888888888999999999999999
Q ss_pred hhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC-------------------------
Q 048242 248 GNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP------------------------- 302 (430)
Q Consensus 248 ~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~------------------------- 302 (430)
.+++...+.++..|+++++.+. ++..+++.|+++++|+++++|.+++.+.+...
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999888888889999888764 78899999999999999999999988765310
Q ss_pred ----CCC------------CCCC-CceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCCh
Q 048242 303 ----EDT------------ILPL-PHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPF 364 (430)
Q Consensus 303 ----~~~------------~~~l-~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 364 (430)
... .. + ++||.+++||+++++++.++++ .+|+++++.||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~-lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~-------- 423 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAK-LGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG-------- 423 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHH-hcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC--------
Confidence 000 00 1 5899999999999999999998 6799999999999997766543321
Q ss_pred hhhhhhccccCCccccccceEEeeCCCCCCC---CCCCCceeEEEEecCcccccccCCcccchHhhh-CC
Q 048242 365 EAQARLNARQGVKCMCLEGLDVLDTKTNQPI---PADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA-NG 430 (430)
Q Consensus 365 ~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~---~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~-dg 430 (430)
....+++|+|+|++ +++|+|.+.+... ..+ +.|||+++||++|.|||++++.|++.|. ||
T Consensus 424 ---~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~--~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dg 487 (651)
T PLN02736 424 ---DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPY--PRGEICVRGPIIFKGYYKDEVQTREVIDEDG 487 (651)
T ss_pred ---CCCCCccCCccCce-EEEEEEccccCcccCCCCC--CCceEEecCCccccccccCHHHHHhhhccCC
Confidence 12357899999999 9999995423322 222 4699999999999999999999999984 54
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3e-55 Score=422.83 Aligned_cols=376 Identities=27% Similarity=0.345 Sum_probs=293.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcC
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE----SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTG 94 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~----~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 94 (430)
..++..++.+.++.+|+.+++... .+.+||+|+.+++.++|.+|...|+.+||+|+|+..|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 457889999999999998888864 3899999999999999999999999779999999999999999999999999
Q ss_pred CeeeeccccCChhhHHHHHhhcCceEEEeccccHH-HHHHHHHHhhccCCCCCCCCeEEEecC----CCCCC-Ccccccc
Q 048242 95 AVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA-LAEEALKIMEGKSEGLFKPPVLIVIGD----ETCDR-APLEYAL 168 (430)
Q Consensus 95 ~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~~~~-~~~~~~~ 168 (430)
++.+|+.+..+++++.++|+++.+++||++.+... .+.......+ ....++...+ ...+. ...+...
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCP-------KVVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhcccc-------chhhhhhhhhhhhhccchhhccccccc
Confidence 99999999999999999999999999999985433 3333322111 0111110000 00000 0000000
Q ss_pred cCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC-CCCCCEEEeccCchh
Q 048242 169 SKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG-MKEGAVYLWTLPIFH 247 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~pl~h 247 (430)
..+...+ . ..... ......+..++|+|.|+|||||||.||||++||+|+.+++.......+ ++.+|+.++.+|+.|
T Consensus 168 ~~~~~~~-~-~~~~~-~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaH 244 (613)
T COG1022 168 DEGISLF-L-IDSAG-LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAH 244 (613)
T ss_pred cccchhh-h-hcccc-cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHH
Confidence 0111111 0 11111 111114567899999999999999999999999999999999999997 999999999999999
Q ss_pred hhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCC-------C-CC---------------
Q 048242 248 GNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAP-------P-ED--------------- 304 (430)
Q Consensus 248 ~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~-------~-~~--------------- 304 (430)
++.+.+..... .++........++..+++.+++++||+++++|.+|+.+.+.. . ..
T Consensus 245 i~Er~~~~~~~-~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~ 323 (613)
T COG1022 245 IFERAFEGGLA-LYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKI 323 (613)
T ss_pred HHHHHHHHHHH-hhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 99998743322 333333444468999999999999999999999999987420 0 00
Q ss_pred ------------------------CCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeeecCccccccccccccCCCCC
Q 048242 305 ------------------------TILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWD 360 (430)
Q Consensus 305 ------------------------~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~ 360 (430)
....-.++|++++||+++++++...++..|+++.++||+||+++.++++.+..
T Consensus 324 ~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~~--- 400 (613)
T COG1022 324 SRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPDR--- 400 (613)
T ss_pred HhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccccC---
Confidence 00102489999999999999999999999999999999999999999876543
Q ss_pred CCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh-CC
Q 048242 361 SLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA-NG 430 (430)
Q Consensus 361 ~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~-dg 430 (430)
.+.+++|+|+|++ +++|.|. |||+||||+||+|||++|+.|+++|. ||
T Consensus 401 --------~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DG 449 (613)
T COG1022 401 --------FVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDG 449 (613)
T ss_pred --------cccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccC
Confidence 3569999999999 9999882 99999999999999999999999995 76
No 8
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=4.7e-55 Score=415.32 Aligned_cols=394 Identities=22% Similarity=0.225 Sum_probs=325.4
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYES--------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~--------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
....|++++|.+.++.+|+.+++.... +++||.|..+++.+++..|++.|+++++.|+|+..|++||+++..
T Consensus 72 ~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~ 151 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEM 151 (691)
T ss_pred CCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHH
Confidence 467899999999999999999998743 799999999999999999999999999999999999999999999
Q ss_pred HhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc-ccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 89 GVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ-QYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 89 A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
||...|++.+||...++++.++++++.+.+.++|+++ +....+.+..... .++..+.+|.+++...........
T Consensus 152 a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-----~~~~LK~iI~~~~~~~~~~~~~~~ 226 (691)
T KOG1256|consen 152 ACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-----SLPSLKAIIQLDEPSDELKEKAEN 226 (691)
T ss_pred HHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-----cCccceeEEEecCCchhhhhhhhc
Confidence 9999999999999999999999999999999999995 4444444333210 123678899998765433333333
Q ss_pred ccCCccchhhhhhcCCCCCCCC-CCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHH---Hhhc---CCCCCCEEE
Q 048242 168 LSKGVTEYEKLLETGDPEFAWK-PPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNV---VLTW---GMKEGAVYL 240 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~---~~~~---~~~~~~~~~ 240 (430)
....+.+|+++.+.+....... .+..++|.|.|.|||||||.||||++||+|+...+... .... ....+|+++
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 3345899999999887665544 47889999999999999999999999999998755432 1111 223479999
Q ss_pred eccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC----------------
Q 048242 241 WTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED---------------- 304 (430)
Q Consensus 241 ~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~---------------- 304 (430)
+.+||.|++....-......|+.+-+++ -|+..+.+.|++.+||.+.++|.+|+++.+...+.
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999999998777778899998887 48899999999999999999999999997521000
Q ss_pred ------------C--CC-------------C-CCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCcccccccccccc
Q 048242 305 ------------T--IL-------------P-LPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAW 355 (430)
Q Consensus 305 ------------~--~~-------------~-l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~ 355 (430)
. .+ . -..+|.+++|++|+++++.+.++ .+|++|+++||+||+++.++....
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~ 465 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLP 465 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccC
Confidence 0 01 0 25899999999999999999999 558999999999999866655443
Q ss_pred CCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh-hCC
Q 048242 356 NPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF-ANG 430 (430)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f-~dg 430 (430)
.+ ...+++|.|+|++ +++++|..+-+.-+.+ ..|||||||++||+|||+||++|.++| +||
T Consensus 466 ~d-----------~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDG 527 (691)
T KOG1256|consen 466 GD-----------NVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDG 527 (691)
T ss_pred CC-----------CCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccc
Confidence 32 1459999999999 9999998767777777 569999999999999999999999999 566
No 9
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.5e-54 Score=437.27 Aligned_cols=392 Identities=20% Similarity=0.285 Sum_probs=300.3
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC-------C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE-------S--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~-------~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
...|+.++|++.++++|+++|+.+. + +++||+||.++++++|+.|.++|+++||+|+|+++|+++|++++|
T Consensus 41 ~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 120 (660)
T PLN02861 41 DIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAME 120 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3468999999999999999999741 1 579999999999999999999999999999999999999999999
Q ss_pred HhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccc
Q 048242 89 GVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYAL 168 (430)
Q Consensus 89 A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (430)
||+++|++++||+|.++.+++.++++.++++++|++.+....+........ ...+.++.+++............
T Consensus 121 A~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~------~~l~~ii~~~~~~~~~~~~~~~~ 194 (660)
T PLN02861 121 ACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCS------SNLKTIVSFGDVSSEQKEEAEEL 194 (660)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCC------CCCEEEEEECCCChhhhhhhhcC
Confidence 999999999999999999999999999999999998765444333222111 02455666654211000000000
Q ss_pred cCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC-----CCCCCEEEecc
Q 048242 169 SKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG-----MKEGAVYLWTL 243 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~~~~~~~~ 243 (430)
.....+|.+++....... ...+..++|+++|+|||||||.||||++||.+++..+......++ +..+|++++.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~-~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~l 273 (660)
T PLN02861 195 GVSCFSWEEFSLMGSLDC-ELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYL 273 (660)
T ss_pred CcEEEEHHHHHHhCcccC-CCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEEC
Confidence 112245666654332211 112346799999999999999999999999999888776655443 46789999999
Q ss_pred CchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCC----------------------
Q 048242 244 PIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAP---------------------- 301 (430)
Q Consensus 244 pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~---------------------- 301 (430)
|++|.+++...+.+++.|+++++. .+++..+++.|+++++|+++++|.+++.+....
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~ 352 (660)
T PLN02861 274 PLAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 999999988766788889998877 468999999999999999999999999886410
Q ss_pred ---------------CCCCCC------CC-CceeEEeecCCCCCHHHHHHHHhcCc-EEEeeecCccccccccccccCCC
Q 048242 302 ---------------PEDTIL------PL-PHVVNVNTGGSPPPPPILLAMSQKGF-RVTHVYGLSEINGPATVCAWNPN 358 (430)
Q Consensus 302 ---------------~~~~~~------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~-~v~~~YG~tE~~~~~~~~~~~~~ 358 (430)
...... .+ ++||.+++||+++++++.+.++.++. .++++||+||+++.++......
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~- 431 (660)
T PLN02861 353 LGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIANV- 431 (660)
T ss_pred HHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeeccccc-
Confidence 000000 02 58999999999999998765556664 7999999999976655432110
Q ss_pred CCCCChhhhhhhccccCCccccccceEEeeC-CCC-CCCCCCCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 359 WDSLPFEAQARLNARQGVKCMCLEGLDVLDT-KTN-QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 359 ~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~-~~~-~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
....+++|+|++++ +++|+|. +.| ..++.+ +.|||+++|++++.|||++|++|++.|.||
T Consensus 432 ---------~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~dG 493 (660)
T PLN02861 432 ---------FSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLIDG 493 (660)
T ss_pred ---------CCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhhcc
Confidence 11347999999999 9999983 324 333444 679999999999999999999999999765
No 10
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=3.2e-53 Score=430.96 Aligned_cols=392 Identities=19% Similarity=0.200 Sum_probs=302.8
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC------------C-----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEE
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE------------S-----------KHYTWQQTYQRCRRLASALSQLSIGPGTAVS 74 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~------------~-----------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~ 74 (430)
...|+.++|++.++.+|+++|+.+. + +++||+|+.++++++|+.|.+.|+++||+|+
T Consensus 56 ~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Va 135 (696)
T PLN02387 56 GATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVA 135 (696)
T ss_pred CCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 3468999999999999999999531 1 3489999999999999999999999999999
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEe
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVI 154 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 154 (430)
|+++|++||+++++||+++|++++|+++.++++++.+++++++++++|++.+....+.......+ ....++.+
T Consensus 136 i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~-------~l~~ii~~ 208 (696)
T PLN02387 136 IFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE-------TVKRVIYM 208 (696)
T ss_pred EEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC-------CceEEEEE
Confidence 99999999999999999999999999999999999999999999999998876665555443333 56677777
Q ss_pred cCCCCCCCcc-cccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc-C
Q 048242 155 GDETCDRAPL-EYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW-G 232 (430)
Q Consensus 155 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~-~ 232 (430)
++........ .........+|.++...+...........++|+++|+|||||||.||||++||+|+..++......+ .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~ 288 (696)
T PLN02387 209 DDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPK 288 (696)
T ss_pred CCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCC
Confidence 6532110000 0001112345666665443222222334689999999999999999999999999998887766554 5
Q ss_pred CCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCC------C--HHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC
Q 048242 233 MKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQA------S--AKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED 304 (430)
Q Consensus 233 ~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~------~--~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~ 304 (430)
+..+|++++.+|++|.+++...+.++..|+++.+.... + +..++..++++++|+++++|.+++.+.+.....
T Consensus 289 ~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~ 368 (696)
T PLN02387 289 LGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKK 368 (696)
T ss_pred CCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHH
Confidence 78899999999999999998766667777776554321 1 234567899999999999999999986431100
Q ss_pred ---------------------------------C-------------CCCCCceeEEeecCCCCCHHHHHHHH-hcCcEE
Q 048242 305 ---------------------------------T-------------ILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRV 337 (430)
Q Consensus 305 ---------------------------------~-------------~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v 337 (430)
. ....+++|.+++||+++++++.+.++ .+|+++
T Consensus 369 ~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v 448 (696)
T PLN02387 369 VDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPI 448 (696)
T ss_pred HhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCe
Confidence 0 00015899999999999999998888 579999
Q ss_pred EeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCC-CCCCceeEEEEecCcccccc
Q 048242 338 THVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIP-ADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 338 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~-~~~~~~Gel~v~g~~v~~gY 416 (430)
+++||+||+++.++.+...+ ...+++|+|++++ +++|+|.+++.... ....+.|||+|+|+++|+||
T Consensus 449 ~~~YG~TEt~~~~~~~~~~~-----------~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY 516 (696)
T PLN02387 449 GQGYGLTETCAGATFSEWDD-----------TSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGY 516 (696)
T ss_pred eEeechhhcccceeecCccc-----------CCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchh
Confidence 99999999987666543211 2347899999999 99999944343322 11114699999999999999
Q ss_pred cCCcccchHhhh
Q 048242 417 LKNPKANEEAFA 428 (430)
Q Consensus 417 ~~~~~~t~~~f~ 428 (430)
|++|++|++.|.
T Consensus 517 ~~~pe~T~~~f~ 528 (696)
T PLN02387 517 FKNQEKTDEVYK 528 (696)
T ss_pred cCCHHHHhhhhc
Confidence 999999999983
No 11
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5e-52 Score=415.50 Aligned_cols=429 Identities=73% Similarity=1.239 Sum_probs=333.0
Q ss_pred CCCCCCCCcCCCCCCCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCc
Q 048242 1 MEPQNDIDDLPKNPANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNV 80 (430)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~ 80 (430)
|-..++++++-...+.+...++.+++++.+..+|+++|+++.+..+||+||.++++++|+.|.+.|+++||+|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~ 80 (567)
T PLN02479 1 MAKERDIDDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNI 80 (567)
T ss_pred CccccccccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCc
Confidence 55677888888888888888999999999999999999999889999999999999999999999999999999999999
Q ss_pred hhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCC
Q 048242 81 PAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCD 160 (430)
Q Consensus 81 ~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 160 (430)
++++++++||+++|++++|++|..+.+++.++++.++++++++++++.+.+.+.................++.+++....
T Consensus 81 ~~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (567)
T PLN02479 81 PAMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCD 160 (567)
T ss_pred HHHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCC
Confidence 99999999999999999999999999999999999999999999887665555433222100000122334444432211
Q ss_pred CCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEE
Q 048242 161 RAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYL 240 (430)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 240 (430)
..........+...+.+++....+..........++.++++|||||||.||+|+++|+++..........++++.+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~ 240 (567)
T PLN02479 161 PKSLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYL 240 (567)
T ss_pred ccccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEE
Confidence 11111112234455666665443322211223345678899999999999999999999877666666677888999999
Q ss_pred eccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCC-CCCCceeEEeecC
Q 048242 241 WTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTI-LPLPHVVNVNTGG 319 (430)
Q Consensus 241 ~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~-~~l~~lr~v~~~G 319 (430)
+.+|++|.+++...+...+.++..+++..+++..+++.++++++|+++++|.+++.+......... . +++++.++++|
T Consensus 241 ~~~p~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~-~~~l~~~~~~G 319 (567)
T PLN02479 241 WTLPMFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILP-LPRVVHVMTAG 319 (567)
T ss_pred EecchhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhccccc-ccceeEEEEcC
Confidence 999999999987665554556666666778999999999999999999999999999876543332 3 78999999999
Q ss_pred CCCCHHHHHHHHhcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCC
Q 048242 320 SPPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADG 399 (430)
Q Consensus 320 ~~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~ 399 (430)
+++++.+.+++++.+.++++.||+||+++.++.+...++|...+.........++|.+.+++..++|+|++++++++.++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g 399 (567)
T PLN02479 320 AAPPPSVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADG 399 (567)
T ss_pred CCCCHHHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCC
Confidence 99999999999877999999999999976655544333333222211112224678888888338999977688887654
Q ss_pred CceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 400 KTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 400 ~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
++.|||+++|++++.|||++++.|.+.|.+|
T Consensus 400 ~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g 430 (567)
T PLN02479 400 KTMGEIVMRGNMVMKGYLKNPKANEEAFANG 430 (567)
T ss_pred CCceEEEEeccchhhhhhcCcccccchhcCC
Confidence 4689999999999999999999999998654
No 12
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-52 Score=418.10 Aligned_cols=371 Identities=19% Similarity=0.245 Sum_probs=310.8
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
.++.++|++.++.+|+++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++.++.+++.++++.++++++|++.+....+........ ....++...+... ....++..+++++
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 194 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG-------RLRAWGGNPDDDE-------PSGSTDETLDDLI 194 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc-------cceEEEEecCccc-------cCCcCcccHHHHh
Confidence 9999999999999999999999999876655444321111 1122221111110 0113445667666
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHh
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAA 259 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~ 259 (430)
....... .+...++.++++|||||||.||+|.++|.++.+.+......+++..++++++..|++|.+|+...+.++.
T Consensus 195 ~~~~~~~---~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~ 271 (549)
T PRK07788 195 AGSSTAP---LPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMA 271 (549)
T ss_pred cCCCCCC---CCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHH
Confidence 5433221 2234568899999999999999999999999988888888888999999999999999999988888889
Q ss_pred hcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcE
Q 048242 260 LCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFR 336 (430)
Q Consensus 260 ~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~ 336 (430)
.|+++++...+++..+++.++++++|+++++|+++..+++.... ...+ +++||.+++||+++++++.++++ .++.+
T Consensus 272 ~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~~~~~ 350 (549)
T PRK07788 272 LGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYD-TSSLKIIFVSGSALSPELATRALEAFGPV 350 (549)
T ss_pred hCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCC-CCceeEEEEeCCCCCHHHHHHHHHHhCcc
Confidence 99999998889999999999999999999999999999987654 3444 88999999999999999999998 67999
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccc
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY 416 (430)
+++.||+||++..+..+. .......+++|+|++++ +++|+|++ +++++.| +.|||+++|++++.||
T Consensus 351 l~~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~~~gY 416 (549)
T PRK07788 351 LYNLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDEN-GNEVPRG--VVGRIFVGNGFPFEGY 416 (549)
T ss_pred ceeccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECCC-cCCCCCC--CeEEEEEeCCCccccc
Confidence 999999999875544321 11123457899999999 99999988 9999998 8999999999999999
Q ss_pred cCCccc
Q 048242 417 LKNPKA 422 (430)
Q Consensus 417 ~~~~~~ 422 (430)
+++++.
T Consensus 417 ~~~~~~ 422 (549)
T PRK07788 417 TDGRDK 422 (549)
T ss_pred cCCCcc
Confidence 998765
No 13
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=9.6e-53 Score=400.23 Aligned_cols=366 Identities=20% Similarity=0.287 Sum_probs=300.3
Q ss_pred HHHHHHh-hCCCcceEEECC-----eeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 25 FLERAAT-VHPTRKSVVYES-----KHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 25 ~l~~~~~-~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
.++++.+ ..++++|+++.+ +.+||+||.+.++++|+.|++ .|+ +||+|+|++|+.+|.++++|||+++|++.
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 4666655 346899999864 689999999999999999997 578 99999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|+.+.++++.+...++++++|++|+++......+.......... ....++.+.... ..|.+
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~----~~~~~iv~~r~~--------------~~~~~ 154 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADA----VLSSVVVVPRLG--------------LWYDE 154 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHH----hhcceEEecccc--------------ccHHH
Confidence 999999999999999999999999998876553332111000000 000133333221 56777
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHH-HHHhhcCCCCCCEEEeccCchhhhhhHH-HH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSL-NVVLTWGMKEGAVYLWTLPIFHGNGWCF-TW 255 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~ 255 (430)
..+........ .+.+.+|+++|+|||||||+||||+++|..+..... .....+.+.++|++.+..+..|++|.+. .+
T Consensus 155 ~~~~~~~~~~~-~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~ 233 (528)
T COG0365 155 AVEKASEKFEF-EPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVF 233 (528)
T ss_pred HhhccCCCCCc-cccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHH
Confidence 77665554433 237899999999999999999999999997655544 4444677789999999999999999996 88
Q ss_pred HHHhhcceEEEeCC--C-CHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-
Q 048242 256 SLAALCGTSVMLRQ--A-SAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS- 331 (430)
Q Consensus 256 ~~l~~g~~~v~~~~--~-~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~- 331 (430)
.++..|+++++++. + ++..+++.|+++++|.++++|+.++.|.+.....+.+ +++||.+.++||||+++.++++.
T Consensus 234 ~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~d-lssLr~~~SaGEPLnpe~~~w~~~ 312 (528)
T COG0365 234 SPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYD-LSSLRVLGSAGEPLNPEAFEWFYS 312 (528)
T ss_pred HHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCccccc-chhheeeeccCCCCCHHHHHHHHH
Confidence 89999999999953 3 4899999999999999999999999999887655566 99999999999999999999998
Q ss_pred hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecC-
Q 048242 332 QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN- 410 (430)
Q Consensus 332 ~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~- 410 (430)
.+|+++.+.||+||++++...... ..+.++.|+|+||+ ++.|+|++ |++++.+ + |+|.++.+
T Consensus 313 ~~g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~ 375 (528)
T COG0365 313 ALGVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPW 375 (528)
T ss_pred HhCCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCC
Confidence 669999999999999855554432 12335559999999 99999999 9999998 7 99999987
Q ss_pred -cccccccCCcccchHhhh
Q 048242 411 -MVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 411 -~v~~gY~~~~~~t~~~f~ 428 (430)
+++.|||+|++++.+.|-
T Consensus 376 p~~~~~~w~d~er~~~~y~ 394 (528)
T COG0365 376 PGMALTYWNDPERYKEAYF 394 (528)
T ss_pred chhhhhhhCCHHHHHHHHh
Confidence 999999999999988764
No 14
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.5e-52 Score=414.49 Aligned_cols=374 Identities=19% Similarity=0.200 Sum_probs=302.2
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYES-KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTG 94 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 94 (430)
.....++.+.|.+.++++|+++|+.+.+ +++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||+++|
T Consensus 15 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G 91 (539)
T PRK06334 15 LRSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSG 91 (539)
T ss_pred cCcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcC
Confidence 4455789999999999999999998765 799999999999999999987 389999999999999999999999999
Q ss_pred CeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccc
Q 048242 95 AVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTE 174 (430)
Q Consensus 95 ~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
++++|++|.++.+++.++++.+++++++++.+....+.+....... ....++.+++... ...
T Consensus 92 ~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~i~~~~~~~------------~~~ 153 (539)
T PRK06334 92 KIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE------YPFSLIYMEEVRK------------ELS 153 (539)
T ss_pred CeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc------ccccEEEEehhhh------------hcc
Confidence 9999999999999999999999999999988765544432211000 0123333332110 000
Q ss_pred hhhhhh-----cCCCC----CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCc
Q 048242 175 YEKLLE-----TGDPE----FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 175 ~~~~~~-----~~~~~----~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl 245 (430)
+.+... ..... ........++++++|+|||||||.||+|+++|+++..+.......++++.+|++++.+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~ 233 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPP 233 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecch
Confidence 001000 00000 000123467899999999999999999999999999888877778888999999999999
Q ss_pred hhhhhhHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCC
Q 048242 246 FHGNGWCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPP 323 (430)
Q Consensus 246 ~h~~gl~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~ 323 (430)
+|.+|+.. .+.++..|+++++.. .+++..+++.|+++++|+++++|++++.+++.......+ +++||.+++||++++
T Consensus 234 ~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~i~~gG~~l~ 312 (539)
T PRK06334 234 FHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESC-LPSLRFVVIGGDAFK 312 (539)
T ss_pred HhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccc-cccccEEEECCccCC
Confidence 99999874 677788899988875 579999999999999999999999999998876554455 899999999999999
Q ss_pred HHHHHHHH-hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCc
Q 048242 324 PPILLAMS-QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKT 401 (430)
Q Consensus 324 ~~~~~~~~-~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~ 401 (430)
+++.++++ .+ ++.+++.||+||+++.++.+.... ....+++|+|++++ +++|+|++++++++.| +
T Consensus 313 ~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~ 379 (539)
T PRK06334 313 DSLYQEALKTFPHIQLRQGYGTTECSPVITINTVNS----------PKHESCVGMPIRGM-DVLIVSEETKVPVSSG--E 379 (539)
T ss_pred HHHHHHHHHHCCCCeEEecccccccCceEEeccCCC----------CCCCCcCceecCCC-EEEEEcCCCCccCCCC--c
Confidence 99999998 55 789999999999987665433211 11236799999999 9999998778999998 8
Q ss_pred eeEEEEecCcccccccCCcccch
Q 048242 402 IGEVVMRGNMVMKGYLKNPKANE 424 (430)
Q Consensus 402 ~Gel~v~g~~v~~gY~~~~~~t~ 424 (430)
.|||+|+|++++.|||++++.+.
T Consensus 380 ~Gel~v~g~~~~~GY~~~~~~~~ 402 (539)
T PRK06334 380 TGLVLTRGTSLFSGYLGEDFGQG 402 (539)
T ss_pred eEEEEEecCcccccccCCccccc
Confidence 99999999999999999998754
No 15
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.6e-51 Score=409.66 Aligned_cols=402 Identities=45% Similarity=0.789 Sum_probs=308.2
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
.+.++.++|++.++.+|+++|+++.+.++||+||.++++++|+.|.++|+++||+|+|+++|++++++++|||+++|+++
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~ 91 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVL 91 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEE
Confidence 44679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|++|.++.+++.++++.++++++|++.+....+.++....+..... ....++.+++...... ......++.+
T Consensus 92 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 164 (579)
T PLN03102 92 NPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSN--LNLPVIFIHEIDFPKR-----PSSEELDYEC 164 (579)
T ss_pred eeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccc--cCceEEEecccccccC-----CcccccCHHH
Confidence 99999999999999999999999999887766655544332210000 1123444443211000 0012234555
Q ss_pred hhhcCCCCCCC----CCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH
Q 048242 178 LLETGDPEFAW----KPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF 253 (430)
Q Consensus 178 ~~~~~~~~~~~----~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~ 253 (430)
++......... .....++++++|+|||||||.||+|+++|.++..........+.+...+++++.+|++|..++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 244 (579)
T PLN03102 165 LIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTF 244 (579)
T ss_pred HHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhH
Confidence 54433221111 11235689999999999999999999999997655544445556777889999999999999988
Q ss_pred HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhc
Q 048242 254 TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQK 333 (430)
Q Consensus 254 ~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 333 (430)
.+.++..|+++++...+++..+++.|+++++|+++++|+++..+.+........ .++++.+++||+++++.+.++++++
T Consensus 245 ~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~gg~~~~~~~~~~~~~~ 323 (579)
T PLN03102 245 TWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSP-RSGPVHVLTGGSPPPAALVKKVQRL 323 (579)
T ss_pred HHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCC-cccceEEEECCCCCCHHHHHHHHHc
Confidence 788888999999998889999999999999999999999999999875443333 5678889999999999999999888
Q ss_pred CcEEEeeecCccccccccccccCCCCCCCChhhh---hhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecC
Q 048242 334 GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQ---ARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN 410 (430)
Q Consensus 334 ~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~---~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~ 410 (430)
|+++++.||+||+++.++.+.....|...+.... ....+..+.+++ .+++.|.+++++++.++++.|||+++|+
T Consensus 324 g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~v~i~~~~~~~~v~~~~~~~GEl~v~g~ 400 (579)
T PLN03102 324 GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA---DVDVKNKETQESVPRDGKTMGEIVIKGS 400 (579)
T ss_pred CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc---ceEEeccccccccCCCCCCceEEEEECc
Confidence 9999999999999866554332222211111100 011233333443 5677777667888764336899999999
Q ss_pred cccccccCCcccchHhhhCC
Q 048242 411 MVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 411 ~v~~gY~~~~~~t~~~f~dg 430 (430)
+++.|||++++.+.+.|.+|
T Consensus 401 ~~~~GY~~~~~~t~~~f~~g 420 (579)
T PLN03102 401 SIMKGYLKNPKATSEAFKHG 420 (579)
T ss_pred chhhhhcCChhhhHhhhccC
Confidence 99999999999999998765
No 16
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=5.2e-53 Score=407.78 Aligned_cols=370 Identities=24% Similarity=0.373 Sum_probs=291.9
Q ss_pred HHHHHhhCCCcceEEE-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccC
Q 048242 26 LERAATVHPTRKSVVY-ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRL 104 (430)
Q Consensus 26 l~~~~~~~p~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~ 104 (430)
|+++++++|+++|+++ .++++||+||+++++++|..|.+.|+++|++|+++++|+++++++++||+++|++++|++|.+
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6889999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhhcCceEEEec--cccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcC
Q 048242 105 NPLNVAIILGHAEAALVFVD--QQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETG 182 (430)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (430)
+.+++.++++.++++++|+. .+... +..+....... .....++.++....... ......+....
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~- 146 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEP-LKKLKSIFKQE----DPSSSIIILDRDDLPKK--------EALKSASLSDE- 146 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHH-HHHHHHHHTTS----TTTEEEEEESHSSCTTC--------HHHHHHHHCHC-
T ss_pred ccccccccccccceeEEEEeccccccc-cccchhhhccc----ccccccccccccccccc--------ccccccccccc-
Confidence 99999999999999999971 01111 22222222100 02334555553321100 00000000000
Q ss_pred CCCCCCCCC-CCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHH--hhcCCCCCCEEEeccCchhhhhh-HHHHHHH
Q 048242 183 DPEFAWKPP-RDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVV--LTWGMKEGAVYLWTLPIFHGNGW-CFTWSLA 258 (430)
Q Consensus 183 ~~~~~~~~~-~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~~~~~pl~h~~gl-~~~~~~l 258 (430)
.. .+ ..++++++++|||||||.||+|.++|+++.+.+..+. ..++++ |++++.+|++|.+|+ ..++.++
T Consensus 147 -~~----~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l 219 (417)
T PF00501_consen 147 -PQ----SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAAL 219 (417)
T ss_dssp -SH----STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHH
T ss_pred -cc----cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccc
Confidence 00 00 0568999999999999999999999999988877754 223333 699999999999999 6789999
Q ss_pred hhcceEEEeCCCC---HHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC----CCCCCCceeEEeecCCCCCHHHHHHHH
Q 048242 259 ALCGTSVMLRQAS---AKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED----TILPLPHVVNVNTGGSPPPPPILLAMS 331 (430)
Q Consensus 259 ~~g~~~v~~~~~~---~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~----~~~~l~~lr~v~~~G~~l~~~~~~~~~ 331 (430)
..|+++++++... +..+++.++++++|+++++|.+++.+++..... ..+ +++||.++++|+++++++.++++
T Consensus 220 ~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~-l~~lr~v~~~G~~l~~~~~~~~~ 298 (417)
T PF00501_consen 220 FSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKD-LSSLRTVISGGEPLPPDLLRRLR 298 (417)
T ss_dssp HCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTT-GTT-SEEEEESST-CHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccccccccccccccccccccccccccc-cccccccccccccCChhhccccc
Confidence 9999999998654 467899999999999999999999999843221 234 88999999999999999999999
Q ss_pred -hcCc-EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 332 -QKGF-RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 332 -~~~~-~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
.++. ++++.||+||++++++.... .....+.+++|+|++++ +++|+|++++++++.| +.|||+|+|
T Consensus 299 ~~~~~~~i~~~YG~tE~~~~~~~~~~---------~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~ 366 (417)
T PF00501_consen 299 KAFGNAPIINLYGSTETGSIATIRPP---------EDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRG 366 (417)
T ss_dssp HHHTTSEEEEEEEEGGGSSEEEEEET---------TTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEES
T ss_pred cccccccceecccccccceeeecccc---------ccccccccccccccccc-cccccccccccccccc--ccccccccC
Confidence 4566 99999999999888865421 11223457899999999 9999999999999998 899999999
Q ss_pred CcccccccCCcccchHhhhC
Q 048242 410 NMVMKGYLKNPKANEEAFAN 429 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~d 429 (430)
++++.||++++++++++|.+
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~ 386 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFID 386 (417)
T ss_dssp TTSBSEETTBHHHHHHHEET
T ss_pred Cccceeeecccccccccccc
Confidence 99999999999999999854
No 17
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=6.7e-52 Score=414.21 Aligned_cols=393 Identities=20% Similarity=0.242 Sum_probs=305.1
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
+..+.++.++|++.++.+|+++|+++.++++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Ga 82 (563)
T PLN02860 3 NHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGG 82 (563)
T ss_pred chhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccE
Confidence 44567899999999999999999999889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++|.++.+++.++++.+++++++++.+........... . ......++.+++...... .........
T Consensus 83 v~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~-----~~~~~~~i~~~~~~~~~~----~~~~~~~~~ 152 (563)
T PLN02860 83 IVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQND-R-----LPSLMWQVFLESPSSSVF----IFLNSFLTT 152 (563)
T ss_pred EEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhc-c-----CCceeEEEEecCcccccc----cchhhcccc
Confidence 999999999999999999999999999987653322222110 0 012223333332110000 000001111
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
+++...............++++++|+|||||||.||+|+++|+++..+.......+++..+|+++...|++|.+++...+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 232 (563)
T PLN02860 153 EMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAL 232 (563)
T ss_pred chhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHH
Confidence 11111111111111234578999999999999999999999999988777766778889999999999999999998888
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC--CCCCCCceeEEeecCCCCCHHHHHHHH-h
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED--TILPLPHVVNVNTGGSPPPPPILLAMS-Q 332 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~-~ 332 (430)
.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+..... ... +++||.+++||+++++++.++++ .
T Consensus 233 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~~ 311 (563)
T PLN02860 233 AMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKV-FPSVRKILNGGGSLSSRLLPDAKKL 311 (563)
T ss_pred HHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhcccc-ccceeEEEeCCCcCCHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999998764322 233 78999999999999999999998 4
Q ss_pred c-CcEEEeeecCccccccccccccCCC-CCCC-----------ChhhhhhhccccCCccccccceEEeeCCCCCCCCCCC
Q 048242 333 K-GFRVTHVYGLSEINGPATVCAWNPN-WDSL-----------PFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADG 399 (430)
Q Consensus 333 ~-~~~v~~~YG~tE~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~ 399 (430)
+ ++++++.||+||+++.++.....+. .... ..........++|+|++++ +++|+|++ .+
T Consensus 312 ~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g- 383 (563)
T PLN02860 312 FPNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS- 383 (563)
T ss_pred cCCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC-
Confidence 5 7899999999999765554332210 0000 0000011234789999999 99999875 34
Q ss_pred CceeEEEEecCcccccccCCcccchHhhh
Q 048242 400 KTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 400 ~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+.|||+++|++++.|||++++.|.+.|.
T Consensus 384 -~~Gel~v~g~~~~~GY~~~~~~t~~~~~ 411 (563)
T PLN02860 384 -RVGRILTRGPHVMLGYWGQNSETASVLS 411 (563)
T ss_pred -ceeEEEEecCcccccccCCccccchhcc
Confidence 7899999999999999999999988873
No 18
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.2e-52 Score=420.39 Aligned_cols=392 Identities=21% Similarity=0.276 Sum_probs=301.0
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE----S-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
...|+.++|.+.++.+|+++|+.+. + .++||+|+.++++++|+.|.+.|+++||+|+|+++|++||++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4668999999999999999999742 1 357999999999999999999999999999999999999999999
Q ss_pred HhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH-HHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 89 GVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA-LAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 89 A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
||+++|++++|+++.++++++.++++.++++++|++..... .+.......+ ....++.+++...........
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~-------~l~~ii~~~~~~~~~~~~~~~ 192 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK-------RLKAIVSFTSVTEEESDKASQ 192 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC-------CceEEEEECCCChHHhhhhhc
Confidence 99999999999999999999999999999999999875332 2211111111 345566665422100000000
Q ss_pred ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhh---c--CCCCCCEEEec
Q 048242 168 LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLT---W--GMKEGAVYLWT 242 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~---~--~~~~~~~~~~~ 242 (430)
......+|++++..+........+..++++++|+|||||||.||||++||+|+...+...... + +++.+|++++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~ 272 (660)
T PLN02430 193 IGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSF 272 (660)
T ss_pred CCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEe
Confidence 011235677766544322222233467899999999999999999999999998877655332 2 46789999999
Q ss_pred cCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC--------------------
Q 048242 243 LPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP-------------------- 302 (430)
Q Consensus 243 ~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~-------------------- 302 (430)
+|++|.+++...+.++..|+++++... ++..+++.|.++++|++.++|.+|+.+.+...
T Consensus 273 lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 351 (660)
T PLN02430 273 LPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKY 351 (660)
T ss_pred CcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999999998877777788988877754 78889999999999999999999988864210
Q ss_pred -----------C--CC-CC----------CCCceeEEeecCCCCCHHHHHHHHhcC-cEEEeeecCccccccccccccCC
Q 048242 303 -----------E--DT-IL----------PLPHVVNVNTGGSPPPPPILLAMSQKG-FRVTHVYGLSEINGPATVCAWNP 357 (430)
Q Consensus 303 -----------~--~~-~~----------~l~~lr~v~~~G~~l~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~~ 357 (430)
. .. .+ ..++||.+++||+++++++.+.++.++ +.++++||+||+++.++.+...+
T Consensus 352 ~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 431 (660)
T PLN02430 352 KLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPDE 431 (660)
T ss_pred HHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeecccc
Confidence 0 00 00 016899999999999999988777775 68999999999987666543221
Q ss_pred CCCCCChhhhhhhccccCCccccccceEEeeC-CCC-CCCCCCCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 358 NWDSLPFEAQARLNARQGVKCMCLEGLDVLDT-KTN-QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 358 ~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~-~~~-~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
....+++|+|.+++ ++++.|. +.+ .+++.+ ..|||+|+|++++.|||++|++|.+.|.||
T Consensus 432 ----------~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~--~~GEi~vrg~~v~~GY~~~~e~t~~~~~dG 493 (660)
T PLN02430 432 ----------MCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEP--PRGEICVRGKCLFSGYYKNPELTEEVMKDG 493 (660)
T ss_pred ----------CCCCCCccCCCCce-EEEEEEcCCcCcccCCCC--CcceEEecCCCccccccCChHHhhhhhhcc
Confidence 12358999999999 9999873 322 344444 579999999999999999999999998765
No 19
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=6.8e-51 Score=405.92 Aligned_cols=378 Identities=23% Similarity=0.303 Sum_probs=312.1
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
-.|+..++.++|++.++.+|+++|+++.+ +.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|
T Consensus 19 ~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 19 GHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHH
Confidence 45667789999999999999999999865 899999999999999999999999999999999999999999999
Q ss_pred HhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH-----HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCc
Q 048242 89 GVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF-----ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAP 163 (430)
Q Consensus 89 A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 163 (430)
||+++|++++|++|.++.+++.++++.++++++++++.+. ..+.+...... ....++.++...
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----- 166 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP-------ALRHVVVVGGDG----- 166 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC-------CcceEEEecCCC-----
Confidence 9999999999999999999999999999999999987541 22222212111 334455444321
Q ss_pred ccccccCCccchhhhhhcC-------CCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCC
Q 048242 164 LEYALSKGVTEYEKLLETG-------DPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEG 236 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 236 (430)
...+.+++... .+.........++++++++|||||||.||+|+++|.++...+......+++..+
T Consensus 167 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 238 (547)
T PRK13295 167 --------ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGAD 238 (547)
T ss_pred --------ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCC
Confidence 12233332211 001111123456899999999999999999999999999888887788889999
Q ss_pred CEEEeccCchhhhhhH-HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEE
Q 048242 237 AVYLWTLPIFHGNGWC-FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNV 315 (430)
Q Consensus 237 ~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v 315 (430)
+++++..|++|.+++. .++.++..|+++++.+.+++..+++.++++++|++..+|.++..+.........+ +++||.+
T Consensus 239 ~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~ 317 (547)
T PRK13295 239 DVILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRP-VSSLRTF 317 (547)
T ss_pred CeEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCC-cccceEE
Confidence 9999999999999876 4777888999999998889999999999999999999999999999876555555 8999999
Q ss_pred eecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCC
Q 048242 316 NTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQP 394 (430)
Q Consensus 316 ~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~ 394 (430)
++||+++++++.++++ .+++++++.||+||++..+..+.... ......++|+|++++ +++|+|++ +++
T Consensus 318 ~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~~-~~~ 386 (547)
T PRK13295 318 LCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDAD-GAP 386 (547)
T ss_pred EEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECCC-CCC
Confidence 9999999999999998 57999999999999976554432111 112346789999999 99999987 899
Q ss_pred CCCCCCceeEEEEecCcccccccCCcccchHh
Q 048242 395 IPADGKTIGEVVMRGNMVMKGYLKNPKANEEA 426 (430)
Q Consensus 395 ~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~ 426 (430)
++.| +.|||+|+|++++.||+++++.|.+.
T Consensus 387 ~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~ 416 (547)
T PRK13295 387 LPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD 416 (547)
T ss_pred CCCC--CCCeEEEEcCcccccccCCccccccC
Confidence 9988 89999999999999999999988654
No 20
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.3e-51 Score=420.26 Aligned_cols=385 Identities=18% Similarity=0.219 Sum_probs=295.1
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC---------------------------CeeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE---------------------------SKHYTWQQTYQRCRRLASALSQLSIGPG 70 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~---------------------------~~~~Ty~el~~~~~~la~~L~~~gv~~g 70 (430)
...|+.++|.+.++.+|+++|+.+. .+++||+||.++++++|+.|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3568999999999999999999973 4789999999999999999999999999
Q ss_pred CeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCe
Q 048242 71 TAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPV 150 (430)
Q Consensus 71 ~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (430)
|+|+|+++|++||+++++||+++|++++|+++.++++++.++++.++++++|++.+....+........ . ....
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~-----~-~~~~ 220 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGG-----M-PNTT 220 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhcc-----C-CceE
Confidence 999999999999999999999999999999999999999999999999999998765544333222111 0 1234
Q ss_pred EEEecCCCCCCCcccccccCCccchhhhhhcCC--C-CCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHH
Q 048242 151 LIVIGDETCDRAPLEYALSKGVTEYEKLLETGD--P-EFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNV 227 (430)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~ 227 (430)
++.+++..... ........+|.+++..+. . ......+..++++++|+|||||||.||||++||+|+.+.+.+.
T Consensus 221 ii~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~ 296 (700)
T PTZ00216 221 IIYLDSLPASV----DTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILAL 296 (700)
T ss_pred EEEECCCcccc----ccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHH
Confidence 55554421110 001123456777765542 1 1111233468999999999999999999999999999887776
Q ss_pred Hhhc-----CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHH-------HHHhhCceEEeeccHHHH
Q 048242 228 VLTW-----GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYK-------AIAEHGVTNFCAAPIVLN 295 (430)
Q Consensus 228 ~~~~-----~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~-------~l~~~~vt~~~~~p~~l~ 295 (430)
...+ ....+|++++.+|++|.+++......+..|+++++. ++..+.+ .++++++|++.++|.+|+
T Consensus 297 ~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~ 373 (700)
T PTZ00216 297 EDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFD 373 (700)
T ss_pred HhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHH
Confidence 5543 236789999999999999987666666666655442 4555544 688999999999999999
Q ss_pred HHHcCCCC-------------------------CCC---------------CCCCceeEEeecCCCCCHHHHHHHHh-cC
Q 048242 296 SIVNAPPE-------------------------DTI---------------LPLPHVVNVNTGGSPPPPPILLAMSQ-KG 334 (430)
Q Consensus 296 ~l~~~~~~-------------------------~~~---------------~~l~~lr~v~~~G~~l~~~~~~~~~~-~~ 334 (430)
.+.+.... ... ...++||.+++||+++++++.++++. ++
T Consensus 374 ~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~ 453 (700)
T PTZ00216 374 TIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG 453 (700)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh
Confidence 87642100 000 00168999999999999999988874 47
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCC-CCCCCCCceeEEEEecCccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQ-PIPADGKTIGEVVMRGNMVM 413 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~-~~~~~~~~~Gel~v~g~~v~ 413 (430)
+++++||+||+++.++..... ....+++|+|++++ +++|+|.+... ..+.+ +.|||+|+|++++
T Consensus 454 -~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~ 518 (700)
T PTZ00216 454 -MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLF 518 (700)
T ss_pred -hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCccc
Confidence 999999999997665543321 12348999999999 99999986322 22333 5799999999999
Q ss_pred ccccCCcccchHhh-hCC
Q 048242 414 KGYLKNPKANEEAF-ANG 430 (430)
Q Consensus 414 ~gY~~~~~~t~~~f-~dg 430 (430)
.|||++|++|+++| .||
T Consensus 519 ~GY~~~pe~T~~~f~~dG 536 (700)
T PTZ00216 519 KGYYKQEELTREVLDEDG 536 (700)
T ss_pred chhcCChhHhhhhccccC
Confidence 99999999999999 454
No 21
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-50 Score=401.21 Aligned_cols=385 Identities=25% Similarity=0.370 Sum_probs=325.3
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
+...++.+.|++.++.+|+++|+++.++++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchh
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYE 176 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
++|++|..+.+++.++++.+++++++++............... ....++......... .......|.
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP-------ALEHVVICETEEDDP------HTEKMKTFT 148 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC-------CccEEEEEcCccccc------CccccccHH
Confidence 9999999999999999999999999999876665544433222 334444443322110 011234566
Q ss_pred hhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HH
Q 048242 177 KLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TW 255 (430)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~ 255 (430)
++....... .......++++++++|||||||.||+|.++|.++...+......+++..++++++.+|++|.+++.. ++
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (513)
T PRK07656 149 DFLAAGDPA-ERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVN 227 (513)
T ss_pred HHHhcCCCC-CCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHH
Confidence 665443321 1223467789999999999999999999999999988888888889999999999999999999875 67
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcC
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKG 334 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~ 334 (430)
.++..|+++++.+.+++..+++.|+++++|+++++|.+++.+.......... ++++|.+++||+++++++.++++ .++
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~ 306 (513)
T PRK07656 228 APLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAED-LSSLRLAVTGAASMPVALLERFESELG 306 (513)
T ss_pred HHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCC-ccceeeEEecCCCCCHHHHHHHHHHcC
Confidence 7788899998888889999999999999999999999999999987666555 89999999999999999999998 678
Q ss_pred c-EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccc
Q 048242 335 F-RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVM 413 (430)
Q Consensus 335 ~-~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~ 413 (430)
. .+++.||+||++++++.+...... ....+++|+|++++ +++|+|++ +++++.| +.|||+++|++++
T Consensus 307 ~~~~~~~YG~tE~~~~~~~~~~~~~~--------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~ 374 (513)
T PRK07656 307 VDIVLTGYGLSEASGVTTFNRLDDDR--------KTVAGTIGTAIAGV-ENKIVNEL-GEEVPVG--EVGELLVRGPNVM 374 (513)
T ss_pred CCceEeEEccccCCCceeecCccccc--------cccCCCccccCCCc-EEEEECCC-CCCCCCC--CceEEEEEcchhh
Confidence 8 899999999998887766543211 01247899999999 99999987 9999988 8999999999999
Q ss_pred ccccCCcccchHhhh
Q 048242 414 KGYLKNPKANEEAFA 428 (430)
Q Consensus 414 ~gY~~~~~~t~~~f~ 428 (430)
.||+++++.+...|.
T Consensus 375 ~gy~~~~~~~~~~~~ 389 (513)
T PRK07656 375 KGYYDDPEATAAAID 389 (513)
T ss_pred hhhcCCHHHHhhhhc
Confidence 999999999888774
No 22
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-50 Score=404.63 Aligned_cols=389 Identities=22% Similarity=0.292 Sum_probs=320.9
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHHHHHHHhhhc
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMYEVHFGVPMT 93 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 93 (430)
...+..++.++|.+.++.+|+++|+++.++++||+||.+++.++|+.|.+. |+++|++|+++++|++++++++|||+++
T Consensus 5 ~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 84 (546)
T PRK08314 5 LTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRA 84 (546)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 446677899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCC--CCC---------
Q 048242 94 GAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETC--DRA--------- 162 (430)
Q Consensus 94 G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~--------- 162 (430)
|++++|++|..+.+++.++++.+++++++++.+....+....... ....++....... ...
T Consensus 85 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 85 NAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--------RLRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred CcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--------CcceEEEecchhhcccccccCcccccc
Confidence 999999999999999999999999999999987666554432211 1122222210000 000
Q ss_pred ---cccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEE
Q 048242 163 ---PLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVY 239 (430)
Q Consensus 163 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 239 (430)
........++..|++.+..... .......++++++|+|||||||.||+|.++|.++..++......+.+..+|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~ 234 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGLA--PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVV 234 (546)
T ss_pred cccccccccccccccHHHHhcccCC--CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceE
Confidence 0000111234456665543221 12234567899999999999999999999999999988888888889999999
Q ss_pred EeccCchhhhhhH-HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeec
Q 048242 240 LWTLPIFHGNGWC-FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTG 318 (430)
Q Consensus 240 ~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~ 318 (430)
++.+|++|.+|+. .++.++..|+++++.+.+++..+++.++++++|++.++|.++..++........+ ++++|.++.|
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~-~~~l~~~~~g 313 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERD-LSSLRYIGGG 313 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccC-chhhheeeec
Confidence 9999999999986 4667888999999999899999999999999999999999999998776555555 8899999999
Q ss_pred CCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
|+++++++.+++. .++.++++.||+||++..+...... ....+++|+|++++ +++|+|+++++.++.
T Consensus 314 G~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~ 381 (546)
T PRK08314 314 GAAMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPP 381 (546)
T ss_pred cccCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCC
Confidence 9999999999998 6799999999999997665543211 11347899999999 999999877999998
Q ss_pred CCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 398 DGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 398 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+ +.|||+++|++++.||+++++.|.+.|.
T Consensus 382 g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~ 410 (546)
T PRK08314 382 G--EVGEIVVHGPQVFKGYWNRPEATAEAFI 410 (546)
T ss_pred C--CceEEEEECCchhccccCChhHhhhhhh
Confidence 8 8899999999999999999999988773
No 23
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2e-50 Score=407.83 Aligned_cols=388 Identities=21% Similarity=0.284 Sum_probs=306.8
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEEC--------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHH
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYE--------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEV 86 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~--------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~ 86 (430)
.+..+.++.++|++.++.+|+++|+++. .+++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++
T Consensus 20 ~~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~ 99 (632)
T PRK07529 20 ARDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFA 99 (632)
T ss_pred hhcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Confidence 3455678999999999999999999862 47999999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc-----HHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCC
Q 048242 87 HFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY-----FALAEEALKIMEGKSEGLFKPPVLIVIGDETCDR 161 (430)
Q Consensus 87 ~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 161 (430)
+|||+++| +++|++|.++++++.++++.++++++|++... ...+.......+ ....++.++......
T Consensus 100 ~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~ 171 (632)
T PRK07529 100 LWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP-------ELRTVVEVDLARYLP 171 (632)
T ss_pred HHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC-------cceeEEEecCccccc
Confidence 99999999 57999999999999999999999999998643 233333332222 445555554321000
Q ss_pred Cccc-------ccccCCccchhhhhhcCCCCCC-CCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCC
Q 048242 162 APLE-------YALSKGVTEYEKLLETGDPEFA-WKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGM 233 (430)
Q Consensus 162 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~ 233 (430)
.... .....+...|.+.+........ ......++++++++|||||||.||+|+++|.++..++......+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~ 251 (632)
T PRK07529 172 GPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGL 251 (632)
T ss_pred ccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCC
Confidence 0000 0012234556665554432211 1123467999999999999999999999999998888777777888
Q ss_pred CCCCEEEeccCchhhhhhH-HHHHHHhhcceEEEeCC--C----CHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCC
Q 048242 234 KEGAVYLWTLPIFHGNGWC-FTWSLAALCGTSVMLRQ--A----SAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTI 306 (430)
Q Consensus 234 ~~~~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~--~----~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~ 306 (430)
..++++++.+|++|.+++. .++.++..|+++++.+. + ....+++.++++++|++.++|+++..+.+..... .
T Consensus 252 ~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-~ 330 (632)
T PRK07529 252 GPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDG-H 330 (632)
T ss_pred CCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccC-C
Confidence 9999999999999999987 46777888999988753 2 1367889999999999999999999999876432 3
Q ss_pred CCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceE
Q 048242 307 LPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLD 385 (430)
Q Consensus 307 ~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~ 385 (430)
+ +++||.+++||+++++++.++++ .+++++++.||+||++..+..+.... ....+++|+|++++ +++
T Consensus 331 ~-~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~----------~~~~~svG~~~p~~-~v~ 398 (632)
T PRK07529 331 D-ISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDG----------ERRIGSVGLRLPYQ-RVR 398 (632)
T ss_pred C-ccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccc----------cccCCCcccccCCc-eEE
Confidence 4 89999999999999999999998 56999999999999987665443211 12458899999999 899
Q ss_pred Ee--eCCCC---CCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 386 VL--DTKTN---QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 386 v~--d~~~~---~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
|+ |++ + ++++.| +.|||+|+|++++.||++++. +.+.|
T Consensus 399 i~~~d~~-g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~-~~~~~ 441 (632)
T PRK07529 399 VVILDDA-GRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAH-NKGLW 441 (632)
T ss_pred EEEcCCC-CcccccCCCC--CceEEEEECCCccccccCCcc-ccccc
Confidence 85 554 6 788888 899999999999999998654 44444
No 24
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.3e-51 Score=411.13 Aligned_cols=387 Identities=17% Similarity=0.186 Sum_probs=296.4
Q ss_pred CHHHHHHHHHhh--CCCcceEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 21 TPLWFLERAATV--HPTRKSVVYE------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 21 t~~~~l~~~~~~--~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
+..++++++++. +|+++|+++. .+++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||++
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~ 139 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCAR 139 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 346777777654 7899999873 36899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEecccc---------HHHHHHHHHHhhccCCCCCCCCeEEEecCCCC--CC
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY---------FALAEEALKIMEGKSEGLFKPPVLIVIGDETC--DR 161 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 161 (430)
+|++++|+++.++.+++.+++++++++++|+++.. ...+.++.. ... .....++.+..... ..
T Consensus 140 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~vi~~~~~~~~~~~ 213 (647)
T PTZ00237 140 IGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIE-LST-----FKPSNVITLFRNDITSES 213 (647)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHh-ccc-----CCCCEEEEEEcCCccccc
Confidence 99999999999999999999999999999997531 222222222 110 01234444321110 00
Q ss_pred Cc--c-cccccCCccchhhhhhcCC----CCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHH-HHHHHHHHHhhcCC
Q 048242 162 AP--L-EYALSKGVTEYEKLLETGD----PEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRA-AYLMSLNVVLTWGM 233 (430)
Q Consensus 162 ~~--~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~-l~~~~~~~~~~~~~ 233 (430)
.. . ......+...|++++.... ..........++++++|+|||||||+||||+++|.+ +.............
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~ 293 (647)
T PTZ00237 214 DLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEK 293 (647)
T ss_pred ccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCC
Confidence 00 0 0000112345666554211 111112345678999999999999999999999998 54443333445567
Q ss_pred CCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC--CC----HHHHHHHHHhhCceEEeeccHHHHHHHcCCCC----
Q 048242 234 KEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ--AS----AKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE---- 303 (430)
Q Consensus 234 ~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~--~~----~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~---- 303 (430)
..++++++..|++|+.+...++.+++.|+++++++. +. +..+++.++++++|+++++|++++.+.+....
T Consensus 294 ~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~ 373 (647)
T PTZ00237 294 DIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATII 373 (647)
T ss_pred CCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccc
Confidence 778999999999998776678888999999998864 12 67899999999999999999999999875321
Q ss_pred -CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccc
Q 048242 304 -DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCL 381 (430)
Q Consensus 304 -~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 381 (430)
...+ +++||.++++|+++++++.++++ .+|+++++.||+||+++.++..... .....+++|+|++++
T Consensus 374 ~~~~~-l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~----------~~~~~~s~G~p~~g~ 442 (647)
T PTZ00237 374 RSKYD-LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGH----------INIPYNATGVPSIFI 442 (647)
T ss_pred ccccC-cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCC----------CCCCCCCCccCcCCc
Confidence 2335 89999999999999999999998 5699999999999998655432211 011237899999999
Q ss_pred cceEEeeCCCCCCCCCCCCceeEEEEecC---cccccccCCcccchHhhh
Q 048242 382 EGLDVLDTKTNQPIPADGKTIGEVVMRGN---MVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 382 ~~~~v~d~~~~~~~~~~~~~~Gel~v~g~---~v~~gY~~~~~~t~~~f~ 428 (430)
+++|+|++ |++++.| +.|||++++| +++.|||+|++.+.+.|.
T Consensus 443 -~~~i~d~~-g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~ 488 (647)
T PTZ00237 443 -KPSILSED-GKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFS 488 (647)
T ss_pred -eEEEECCC-CCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHh
Confidence 99999986 9999988 8999999986 889999999999988874
No 25
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-50 Score=398.23 Aligned_cols=359 Identities=24% Similarity=0.334 Sum_probs=304.8
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
.++.++|++.++++|+++|+++.++.+||.||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++..+.+++..+++.++++.++++............ ..+.++.
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~------------------------------------~~~~~~~ 125 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS------------------------------------VKFAELM 125 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc------------------------------------ccHHHHh
Confidence 9999999999999999999999998764433221100 0122222
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHh
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAA 259 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~ 259 (430)
..............++++++++|||||||.||+|.++|.++...+......++++.+|++++.+|++|.+++..++.++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~ 205 (483)
T PRK03640 126 NGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVI 205 (483)
T ss_pred hcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHh
Confidence 11111111222346789999999999999999999999999888777777788999999999999999999998888899
Q ss_pred hcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEe
Q 048242 260 LCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTH 339 (430)
Q Consensus 260 ~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~ 339 (430)
.|+++++.+.+++..+++.++++++|++.++|++++.+....... .. ..+||.++++|+++++.+.+.++++++++++
T Consensus 206 ~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~-~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~ 283 (483)
T PRK03640 206 YGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TY-PSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQ 283 (483)
T ss_pred cCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-cc-CCcceEEEEcCCCCCHHHHHHHHHhCCCeee
Confidence 999999999999999999999999999999999999998765433 22 5799999999999999999999888999999
Q ss_pred eecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCC
Q 048242 340 VYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKN 419 (430)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~ 419 (430)
.||+||++..+...... ......+++|+|++++ +++|.|+ +++++.+ +.|||+++|++++.||+++
T Consensus 284 ~YG~tE~~~~~~~~~~~---------~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~ 349 (483)
T PRK03640 284 SYGMTETASQIVTLSPE---------DALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNR 349 (483)
T ss_pred eeccCcccccccccCcc---------cccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCC
Confidence 99999987544332211 1123458899999999 8999885 5788888 8999999999999999999
Q ss_pred cccchHhhhCC
Q 048242 420 PKANEEAFANG 430 (430)
Q Consensus 420 ~~~t~~~f~dg 430 (430)
++.+...|.+|
T Consensus 350 ~~~~~~~~~~~ 360 (483)
T PRK03640 350 EDATRETFQDG 360 (483)
T ss_pred HHHHHHHHhcC
Confidence 99998887653
No 26
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.8e-50 Score=406.01 Aligned_cols=385 Identities=16% Similarity=0.184 Sum_probs=301.2
Q ss_pred HHHHHHHHHhhCCCcceEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 22 PLWFLERAATVHPTRKSVVYE------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..++|+++++.+|+++|+++. ++++||+||.+++.++|+.|.++|+++||+|+++++|++++++++|||+++|+
T Consensus 54 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Ga 133 (628)
T TIGR02316 54 CHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGA 133 (628)
T ss_pred HHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCC
Confidence 357888888889999999972 37899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccH---------HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYF---------ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEY 166 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (430)
+++|+++.++.+++.++++.++++++|+++... ..+.++..... .....++.++.......
T Consensus 134 v~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~---- 203 (628)
T TIGR02316 134 IHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ------HPPPHVLLVDRGLAPMR---- 203 (628)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC----
Confidence 999999999999999999999999999976431 22222222111 02345666653211000
Q ss_pred cccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHH-HHHHHHhhcCCCCCCEEEeccCc
Q 048242 167 ALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYL-MSLNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~pl 245 (430)
........|.++...............++++++|+|||||||.||||+++|.++.. ........++++.+|++++..|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 283 (628)
T TIGR02316 204 LIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDV 283 (628)
T ss_pred cccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCC
Confidence 00112234555544322111111224678999999999999999999999999753 34455566788999999999999
Q ss_pred hhhhhhH-HHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeec
Q 048242 246 FHGNGWC-FTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTG 318 (430)
Q Consensus 246 ~h~~gl~-~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~ 318 (430)
.|+.++. .++.+++.|+++++.+. +++..+++.|+++++|+++++|++++.+.+.... ...+ +++||.+++|
T Consensus 284 ~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~~~~g 362 (628)
T TIGR02316 284 GWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHD-LSSLHWLFLA 362 (628)
T ss_pred CeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCC-ccceeEEEEe
Confidence 9999865 57788899999999863 5789999999999999999999999998876432 2344 8999999999
Q ss_pred CCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
|+++++++.++++ .++..+++.||+||++..++....... ....+.+++|+|++++ +++|+|+++|++++.
T Consensus 363 Ge~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~ 434 (628)
T TIGR02316 363 GEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGP 434 (628)
T ss_pred cCCCCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCCCCC
Confidence 9999999999998 569999999999999754433221100 0112457899999999 999999966999998
Q ss_pred CCCceeEEEEecC---cccccccCCcccchHhh
Q 048242 398 DGKTIGEVVMRGN---MVMKGYLKNPKANEEAF 427 (430)
Q Consensus 398 ~~~~~Gel~v~g~---~v~~gY~~~~~~t~~~f 427 (430)
+ +.|||+++|| +++.|||++++.+.+.|
T Consensus 435 g--~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~ 465 (628)
T TIGR02316 435 N--EKGVLTVVPPLPPGCLSTVWGDDARFLKTY 465 (628)
T ss_pred C--CcEEEEEecCCCccccccccCChHHHHHhh
Confidence 8 8999999998 67899999998776653
No 27
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.1e-50 Score=398.12 Aligned_cols=393 Identities=31% Similarity=0.479 Sum_probs=333.0
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
.+.+.++.++|.+.++.+|+++|+.+.++.+||+||+++++++|+.|.+.|+++|++|+++++|+.++++++|||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|+++..+.+++..+++.+++++++++.+....+.+.....+ ....++.+++.... ........+
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------~~~~~~~~~ 148 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP-------TVRTVIVEGDGPAA------PLAPEVGEY 148 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC-------CccEEEEecCcccc------ccccccccH
Confidence 99999999999999999999999999999887776666554433 34556655544311 112334556
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
.+++........ .....++++++++|||||||.||+|.++|.++..........+++..++++++..|++|.+++...+
T Consensus 149 ~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 227 (521)
T PRK06187 149 EELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPY 227 (521)
T ss_pred HHHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHH
Confidence 666554333322 2345678899999999999999999999999998888888888999999999999999999999877
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHh-cC
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQ-KG 334 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~~ 334 (430)
.++..|+++++.+.+++..+++.++++++|+++++|++++.+.........+ +++||.+++||+++++++.+.+++ ++
T Consensus 228 ~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~-~~~l~~v~~~Ge~l~~~~~~~~~~~~~ 306 (521)
T PRK06187 228 LALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVD-FSSLRLVIYGGAALPPALLREFKEKFG 306 (521)
T ss_pred HHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccC-cchhhEEEEcCcCCCHHHHHHHHHHhC
Confidence 7999999999998889999999999999999999999999999887765555 899999999999999999999984 49
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
+++++.||+||+++.+..+..+..... ......++|+|++++ +++|+|++ +++++.+.++.|||+++|++++.
T Consensus 307 ~~v~~~YG~tE~~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~~g~~Gel~v~~~~~~~ 379 (521)
T PRK06187 307 IDLVQGYGMTETSPVVSVLPPEDQLPG-----QWTKRRSAGRPLPGV-EARIVDDD-GDELPPDGGEVGEIIVRGPWLMQ 379 (521)
T ss_pred cchheeeccCccCcccccCCccccccc-----ccccCCccccccCCe-EEEEECCC-CCCCCCCCCCeeEEEEECcchhh
Confidence 999999999999877666543321000 112457899999999 89999988 88998822289999999999999
Q ss_pred cccCCcccchHhhhCC
Q 048242 415 GYLKNPKANEEAFANG 430 (430)
Q Consensus 415 gY~~~~~~t~~~f~dg 430 (430)
||+++++.+.+.|.+|
T Consensus 380 ~y~~~~~~~~~~~~~~ 395 (521)
T PRK06187 380 GYWNRPEATAETIDGG 395 (521)
T ss_pred hhcCCHHHHHHHhhCC
Confidence 9999999998888654
No 28
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2e-50 Score=407.07 Aligned_cols=374 Identities=18% Similarity=0.154 Sum_probs=292.9
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhh
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYES-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVP 91 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~ 91 (430)
....++.++|++.++.+|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+
T Consensus 36 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~ 115 (614)
T PRK08180 36 DYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAM 115 (614)
T ss_pred CcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHH
Confidence 346689999999999999999998742 689999999999999999999999999999999999999999999999
Q ss_pred hcCCeeeeccccCC-----hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccc
Q 048242 92 MTGAVLNCINFRLN-----PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEY 166 (430)
Q Consensus 92 ~~G~~~~~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (430)
++|++++|++|.++ .+++.++++.++++++|++.... +......... ....++..++...
T Consensus 116 ~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~------- 180 (614)
T PRK08180 116 YAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVP------ADVEVVAVRGAVP------- 180 (614)
T ss_pred HcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhcc------CCceEEEecCCCC-------
Confidence 99999999999988 78999999999999999976421 1111111110 1122333332110
Q ss_pred cccCCccchhhhhhcCCCCC--CCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCC--CCCEEEec
Q 048242 167 ALSKGVTEYEKLLETGDPEF--AWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMK--EGAVYLWT 242 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~ 242 (430)
......+.+++....... .......++++++|+|||||||.||||++||+++..++......++.. .++++++.
T Consensus 181 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~ 258 (614)
T PRK08180 181 --GRAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDW 258 (614)
T ss_pred --CcccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEe
Confidence 011244555554321111 111234578999999999999999999999999998887777666653 56899999
Q ss_pred cCchhhhhhH-HHHHHHhhcceEEEeC-CCCH---HHHHHHHHhhCceEEeeccHHHHHHHcCCCC----CCCCCCCcee
Q 048242 243 LPIFHGNGWC-FTWSLAALCGTSVMLR-QASA---KAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE----DTILPLPHVV 313 (430)
Q Consensus 243 ~pl~h~~gl~-~~~~~l~~g~~~v~~~-~~~~---~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~----~~~~~l~~lr 313 (430)
+|++|.+|+. .++.+++.|+++++.+ .+++ ..+++.++++++|+++++|.+++.+++.... ...+ +++||
T Consensus 259 lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~-~~~lr 337 (614)
T PRK08180 259 LPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRF-FSRLK 337 (614)
T ss_pred cchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhh-cccee
Confidence 9999999976 4667788899998875 3443 4678899999999999999999999864321 1233 78999
Q ss_pred EEeecCCCCCHHHHHHHHh-----cC--cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEE
Q 048242 314 NVNTGGSPPPPPILLAMSQ-----KG--FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDV 386 (430)
Q Consensus 314 ~v~~~G~~l~~~~~~~~~~-----~~--~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v 386 (430)
.+++||+++++++.+++++ ++ +++++.||+||+++.++.+... ....+++|+|++++ +++|
T Consensus 338 ~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~i 405 (614)
T PRK08180 338 LLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVKL 405 (614)
T ss_pred EEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEEE
Confidence 9999999999999999885 23 7899999999998666543221 12357999999999 9999
Q ss_pred eeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh-CC
Q 048242 387 LDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA-NG 430 (430)
Q Consensus 387 ~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~-dg 430 (430)
+|++ ..|||+++|++++.|||++|+.|.+.|. ||
T Consensus 406 ~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dg 440 (614)
T PRK08180 406 VPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEG 440 (614)
T ss_pred ecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCC
Confidence 9864 4699999999999999999999999984 54
No 29
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=3.2e-50 Score=407.78 Aligned_cols=387 Identities=14% Similarity=0.134 Sum_probs=297.1
Q ss_pred HHHHHHHHh-hCCCcceEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 23 LWFLERAAT-VHPTRKSVVYE------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 23 ~~~l~~~~~-~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
.++|+++++ .+|+++|+++. .+++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 567777765 48999999973 27899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHH---------HHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFAL---------AEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEY 166 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (430)
+++|+++.++.+++.++++.++++++|+++..... +......... .......++..+...........
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 247 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAK---NGVSVGICLTYENQLAMKREDTK 247 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccc---cCCCccEEEEecccccccccccc
Confidence 99999999999999999999999999998764321 1111111000 00011222222221100000000
Q ss_pred cccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHH-HHHHHHhhcCCCCCCEEEeccCc
Q 048242 167 ALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYL-MSLNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~-~~~~~~~~~~~~~~~~~~~~~pl 245 (430)
........|++++.... .........++++++|+|||||||+||||+++|.+++. ........++++.+|++++..|+
T Consensus 248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 326 (666)
T PLN02654 248 WQEGRDVWWQDVVPNYP-TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADC 326 (666)
T ss_pred cccCCcccHHHHhhcCC-CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCc
Confidence 00011223445443221 11112235679999999999999999999999999754 34455667789999999999999
Q ss_pred hhhhhhH-HHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeec
Q 048242 246 FHGNGWC-FTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTG 318 (430)
Q Consensus 246 ~h~~gl~-~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~ 318 (430)
+|++|.. .++.+++.|+++++++. +++..+++.|+++++|+++++|++++.+.+.... ...+ +++||.++++
T Consensus 327 ~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~Lr~i~~~ 405 (666)
T PLN02654 327 GWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHS-RKSLRVLGSV 405 (666)
T ss_pred hhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCC-hhheeEEEEe
Confidence 9999876 46778899999999863 5799999999999999999999999999886532 2334 8899999999
Q ss_pred CCCCCHHHHHHHH-hcC---cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKG---FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQP 394 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~ 394 (430)
|+++++++.+++. .+| +++.+.||+||+++..+...... ...+.+++|+|++|+ +++|+|++ |++
T Consensus 406 Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~---------~~~~~gs~G~p~~g~-~v~i~d~~-g~~ 474 (666)
T PLN02654 406 GEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFGV-QPVIVDEK-GKE 474 (666)
T ss_pred cCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCC---------CCCCCCccCCCCCCc-eEEEECCC-CCC
Confidence 9999999999988 566 78999999999987665432210 112458899999999 99999987 899
Q ss_pred CCCCCCceeEEEEec--CcccccccCCcccchHhh
Q 048242 395 IPADGKTIGEVVMRG--NMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 395 ~~~~~~~~Gel~v~g--~~v~~gY~~~~~~t~~~f 427 (430)
++.+ +.|||++++ |+++.|||+|++.+.+.|
T Consensus 475 ~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~ 507 (666)
T PLN02654 475 IEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTY 507 (666)
T ss_pred CCCC--CceEEEEcCCCchhhhhhcCChHHHHHhh
Confidence 9876 789999999 799999999999987765
No 30
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.2e-49 Score=396.28 Aligned_cols=379 Identities=22% Similarity=0.302 Sum_probs=311.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE--SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..++.+++.+.++.+|+++|+++. ++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 22 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~ 101 (537)
T PLN02246 22 HLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAV 101 (537)
T ss_pred CCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEE
Confidence 458999999999999999999975 478999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchh
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYE 176 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
++|++|.++.+++..+++.+++++++++......+...... ....++.+++.. .....+.
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~---------~~~~~i~~~~~~-----------~~~~~~~ 161 (537)
T PLN02246 102 TTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED---------DGVTVVTIDDPP-----------EGCLHFS 161 (537)
T ss_pred EecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc---------CCceEEEeCCCC-----------CCceeHH
Confidence 99999999999999999999999999988766655443221 123445454321 1123344
Q ss_pred hhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh----hcCCCCCCEEEeccCchhhhhhH
Q 048242 177 KLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL----TWGMKEGAVYLWTLPIFHGNGWC 252 (430)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~h~~gl~ 252 (430)
++........ ......++++++++|||||||.||+|+++|+++...+..... .+++..+|++++.+|++|.+++.
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~ 240 (537)
T PLN02246 162 ELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLN 240 (537)
T ss_pred HHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHH
Confidence 4433222111 122346789999999999999999999999999877665433 46788999999999999999986
Q ss_pred H-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH
Q 048242 253 F-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS 331 (430)
Q Consensus 253 ~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 331 (430)
. ++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+........ ++++|.++.||+++++++.+.++
T Consensus 241 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~l~~~~~~~~~ 319 (537)
T PLN02246 241 SVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYD-LSSIRMVLSGAAPLGKELEDAFR 319 (537)
T ss_pred HHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccC-ccceeEEEEecCcCCHHHHHHHH
Confidence 5 566788899999999899999999999999999999999999998876555555 88999999999999999999998
Q ss_pred -hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 332 -QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 332 -~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
.+ +..+++.||+||++++++.+..... +....+.+++|+|++++ +++|+|++++++++.| +.|||+++|
T Consensus 320 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 390 (537)
T PLN02246 320 AKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRG 390 (537)
T ss_pred HHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEEC
Confidence 45 7889999999999766554321100 00112346899999999 9999998779999998 899999999
Q ss_pred CcccccccCCcccchHhhh
Q 048242 410 NMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~ 428 (430)
++++.|||++++.+.+.|.
T Consensus 391 ~~~~~GY~~~~~~~~~~~~ 409 (537)
T PLN02246 391 PQIMKGYLNDPEATANTID 409 (537)
T ss_pred CchhccccCCchhhhhccc
Confidence 9999999999999988873
No 31
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-50 Score=400.03 Aligned_cols=391 Identities=21% Similarity=0.247 Sum_probs=314.6
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
...++.++++++++++|+++|+++.++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 30 ~~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~ 109 (573)
T PRK05605 30 GDTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVV 109 (573)
T ss_pred CcCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcc-------------
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPL------------- 164 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~------------- 164 (430)
+|++|.++.+++.++++.++++++|+++.....+....... ....++.++.........
T Consensus 110 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (573)
T PRK05605 110 VEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT--------PLETIVSVNMIAAMPLLQRLALRLPIPALRK 181 (573)
T ss_pred eecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc--------ccceeEeeecccccccccccccccccccccc
Confidence 99999999999999999999999999887655544432211 122333332110000000
Q ss_pred ----cccccCCccchhhhhhcCCCC---CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC--CCC
Q 048242 165 ----EYALSKGVTEYEKLLETGDPE---FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG--MKE 235 (430)
Q Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~--~~~ 235 (430)
......+...|.++....... ........++++++++|||||||.||+|.++|+++...+......+. ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 261 (573)
T PRK05605 182 ARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDG 261 (573)
T ss_pred cccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCC
Confidence 000112334566655432211 01112356789999999999999999999999999877665443332 235
Q ss_pred CCEEEeccCchhhhhhHH-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeE
Q 048242 236 GAVYLWTLPIFHGNGWCF-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVN 314 (430)
Q Consensus 236 ~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~ 314 (430)
++++++.+|++|.+|+.. .+.++..|+++++.+.+++..+++.++++++|++.++|.+++.+.+.......+ +++||.
T Consensus 262 ~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~ 340 (573)
T PRK05605 262 PERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVD-LSGVRN 340 (573)
T ss_pred CcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCC-chhccE
Confidence 789999999999999874 556778899999998899999999999999999999999999999877665556 899999
Q ss_pred EeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCC-C
Q 048242 315 VNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKT-N 392 (430)
Q Consensus 315 v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~-~ 392 (430)
+++||+++++++.++++ .++.++++.||+||+++++..+.... ....+++|+|++++ +++|+|+++ +
T Consensus 341 i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~~~ 409 (573)
T PRK05605 341 AFSGAMALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPEDPD 409 (573)
T ss_pred EEECCCcCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCCCC
Confidence 99999999999999998 46899999999999987766543221 12347899999999 999999885 5
Q ss_pred CCCCCCCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 393 QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 393 ~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
++++.+ +.|||+++|+.++.||+++++.+.+.|.+|
T Consensus 410 ~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g 445 (573)
T PRK05605 410 ETMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDG 445 (573)
T ss_pred ccCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCC
Confidence 888888 899999999999999999999998887554
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.4e-50 Score=396.49 Aligned_cols=366 Identities=21% Similarity=0.265 Sum_probs=303.5
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|.+.++++|+++|+++.++++||.||.++++++|+.|.++|+++|++|+++++|++++++++|||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 36799999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.++++++|++.+....+.......+ ....++.+.+.. ....++++
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~~~~~~~ 182 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP-------QATRIVAWTDED------------HDLTVEVL 182 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc-------ccceEEEecCCc------------ccccHHHH
Confidence 99999999999999999999999999876655544332211 222233332211 01233333
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
....... .....+++.++++|||||||.||+|+++|.+++.........+.+..+++++...|++|.+|+...+.++
T Consensus 183 ~~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l 259 (537)
T PRK13382 183 IAAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAA 259 (537)
T ss_pred hhccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHH
Confidence 3221111 1123467899999999999999999999999888877777778888999999999999999998888888
Q ss_pred hhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCc
Q 048242 259 ALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGF 335 (430)
Q Consensus 259 ~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~ 335 (430)
..|+++++...+++..+++.|+++++|+++++|+++..+.+.... ...+ ++++|.+++||+++++++.+.|. .++.
T Consensus 260 ~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~~~~ 338 (537)
T PRK13382 260 SLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYS-GRSLRFAAASGSRMRPDVVIAFMDQFGD 338 (537)
T ss_pred hcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCC-ccceeEEEEcCCCCCHHHHHHHHHHcCC
Confidence 999999988889999999999999999999999999999876532 2233 67999999999999999999998 6688
Q ss_pred EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccc
Q 048242 336 RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKG 415 (430)
Q Consensus 336 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~g 415 (430)
++++.||+||++..+..+.. ......+++|+|++++ +++|+|++ +++++.| +.|||+++|++++.|
T Consensus 339 ~i~~~YG~TE~~~~~~~~~~----------~~~~~~~~vG~p~~~~-~~~i~d~~-~~~~~~g--~~GEl~v~g~~~~~g 404 (537)
T PRK13382 339 VIYNNYNATEAGMIATATPA----------DLRAAPDTAGRPAEGT-EIRILDQD-FREVPTG--EVGTIFVRNDTQFDG 404 (537)
T ss_pred cEEecccccccCcceecChh----------HhccCCCCccccCcCc-EEEEECCC-CCCCCCC--CeeEEEEEcCCcccC
Confidence 99999999999865553321 1112457899999999 99999998 9999988 899999999999999
Q ss_pred ccCCcccc
Q 048242 416 YLKNPKAN 423 (430)
Q Consensus 416 Y~~~~~~t 423 (430)
|+ ++.+
T Consensus 405 Y~--~~~~ 410 (537)
T PRK13382 405 YT--SGST 410 (537)
T ss_pred cc--ccch
Confidence 98 4444
No 33
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-50 Score=394.41 Aligned_cols=367 Identities=22% Similarity=0.359 Sum_probs=307.6
Q ss_pred CHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 21 TPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
.+.+.|++.++.+|+++|+++.++.+||+||.++++++|+.|.+ .|+++|++|+++++|++++++++|||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 57889999999999999999999999999999999999999985 69999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++.++.+++..+++.++++.++++++....+....... ....++.+.+ +.+..
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~~~~------------------~~~~~ 136 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS--------YVQRVISITS------------------LKEIE 136 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc--------CcceEEEecc------------------hHhhh
Confidence 999999999999999999999999887655444332211 1222333322 11111
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHHHH
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSLA 258 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l 258 (430)
..... ......++++++++|||||||.||+|.++|.++..........+++..+|++++.+|++|.+|+.. .+.++
T Consensus 137 ~~~~~---~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l 213 (496)
T PRK06839 137 DRKID---NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTL 213 (496)
T ss_pred ccCCC---CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHH
Confidence 11111 112345688999999999999999999999999777666667778889999999999999999875 46677
Q ss_pred hhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEE
Q 048242 259 ALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVT 338 (430)
Q Consensus 259 ~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~ 338 (430)
..|+++++.+.+++..+++.++++++|++.++|.+++.+.........+ ++++|.+++||+++++.+.+.+++.|+++.
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~ 292 (496)
T PRK06839 214 FAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTN-LQSVRWFYNGGAPCPEELMREFIDRGFLFG 292 (496)
T ss_pred hcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCC-CcccceEEECCCCCCHHHHHHHHHhCCeeE
Confidence 8899998888899999999999999999999999999999887655556 899999999999999999999997799999
Q ss_pred eeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccC
Q 048242 339 HVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLK 418 (430)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~ 418 (430)
+.||+||++..++...... .....+++|+|++++ +++|+|++ ++.++.| +.|||+|+|++++.||++
T Consensus 293 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~ 359 (496)
T PRK06839 293 QGFGMTETSPTVFMLSEED---------ARRKVGSIGKPVLFC-DYELIDEN-KNKVEVG--EVGELLIRGPNVMKEYWN 359 (496)
T ss_pred eeccCCCCCcceEeccccc---------ccccCCCCcccCCCc-eEEEECCC-cCCCCCC--CceEEEEECCCcchhhcC
Confidence 9999999986554332211 112457899999999 99999998 7788888 899999999999999999
Q ss_pred CcccchHhhhCC
Q 048242 419 NPKANEEAFANG 430 (430)
Q Consensus 419 ~~~~t~~~f~dg 430 (430)
+++.+...|.||
T Consensus 360 ~~~~~~~~~~~g 371 (496)
T PRK06839 360 RPDATEETIQDG 371 (496)
T ss_pred ChHHHHHHHcCC
Confidence 999998887654
No 34
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.3e-49 Score=395.27 Aligned_cols=384 Identities=18% Similarity=0.237 Sum_probs=314.5
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCcceEEECC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 14 PANFTALTPLWFLERAATVHPTRKSVVYES-KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 14 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
...+...++.++|++.++.+|+++|+++.+ +.+||+||+++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 17 ~~~~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~ 96 (547)
T PRK06087 17 QGYWGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLK 96 (547)
T ss_pred cCCCCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 345667789999999999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEecccc-----HHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY-----FALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
+|++++|++|..+.+++.++++.+++++++++... ...+........ ....++.++.....
T Consensus 97 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~------- 162 (547)
T PRK06087 97 VGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP-------QLQQIVGVDKLAPA------- 162 (547)
T ss_pred cCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC-------CCcEEEEeCCcCCC-------
Confidence 99999999999999999999999999999997532 223333322222 33455555543211
Q ss_pred ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchh
Q 048242 168 LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFH 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h 247 (430)
.....+.+++....... .......+++++|+|||||||.||+|.++|.++..........+++..++++++.+|++|
T Consensus 163 --~~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h 239 (547)
T PRK06087 163 --TSSLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGH 239 (547)
T ss_pred --cCccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHH
Confidence 11224444443322211 112356789999999999999999999999999888777777788899999999999999
Q ss_pred hhhhH-HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHH
Q 048242 248 GNGWC-FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPI 326 (430)
Q Consensus 248 ~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 326 (430)
.+|+. .++.+++.|+++++.+.+++..+++.|+++++|+++.+|.++..++........+ +++||.+++||+++++++
T Consensus 240 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~-~~~lr~i~~gG~~~~~~~ 318 (547)
T PRK06087 240 ATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPAD-LSALRFFLCGGTTIPKKV 318 (547)
T ss_pred HHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCC-CCCeEEEEEcCCCCCHHH
Confidence 99977 4666778899999999899999999999999999998888777777665444445 889999999999999999
Q ss_pred HHHHHhcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEE
Q 048242 327 LLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVV 406 (430)
Q Consensus 327 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~ 406 (430)
.+.+.+.++++++.||+||+++........ ......+++|+|++++ +++|+|++ +++++.| +.|||+
T Consensus 319 ~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~ 385 (547)
T PRK06087 319 ARECQQRGIKLLSVYGSTESSPHAVVNLDD---------PLSRFMHTDGYAAAGV-EIKVVDEA-RKTLPPG--CEGEEA 385 (547)
T ss_pred HHHHHHcCCcEEEEecccccCCccccCCCc---------chhhcCCcCCccCCCc-eEEEEcCC-CCCCcCC--CcceEE
Confidence 999888899999999999998765543211 0112236789999999 89999977 8999988 899999
Q ss_pred EecCcccccccCCcccchHhhh
Q 048242 407 MRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 407 v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
++|++++.||+++++.+...|.
T Consensus 386 v~g~~~~~gy~~~~~~~~~~~~ 407 (547)
T PRK06087 386 SRGPNVFMGYLDEPELTARALD 407 (547)
T ss_pred EecccccccccCCHHHHHHHhC
Confidence 9999999999999999888773
No 35
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.7e-49 Score=394.85 Aligned_cols=386 Identities=23% Similarity=0.250 Sum_probs=315.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHH
Q 048242 10 LPKNPANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFG 89 (430)
Q Consensus 10 ~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA 89 (430)
....+-+....++.++|++.++.+|+++|+++.++++||+||.+++.++|..|.+.|+++|++|+++++|++++++++||
T Consensus 11 ~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA 90 (542)
T PRK06155 11 RAVDPLPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLG 90 (542)
T ss_pred hhcccCCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 34445556677899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccccc
Q 048242 90 VPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALS 169 (430)
Q Consensus 90 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (430)
|+++|++++|++|.++.+++.++++.+++++++++.+....+........ ....++.++...... ..
T Consensus 91 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~ 157 (542)
T PRK06155 91 CAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDL-------PLPAVWLLDAPASVS------VP 157 (542)
T ss_pred HHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccccc-------CcceEEEecCccccc------cc
Confidence 99999999999999999999999999999999998876665544322111 234455554322100 00
Q ss_pred CCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhh
Q 048242 170 KGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGN 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~ 249 (430)
.. ....+... ...........++++++|+|||||||.||+|+++|.++..........+++..++++++.+|++|.+
T Consensus 158 ~~-~~~~~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~ 234 (542)
T PRK06155 158 AG-WSTAPLPP--LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTN 234 (542)
T ss_pred cc-cchhhhcc--cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHH
Confidence 00 00001100 0011111234678999999999999999999999999988877777788899999999999999999
Q ss_pred hhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHH
Q 048242 250 GWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 250 gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 329 (430)
++...+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+........ .+++|.++.+| +++.+.++
T Consensus 235 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~g~--~~~~~~~~ 311 (542)
T PRK06155 235 ALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDR-AHRVRVALGPG--VPAALHAA 311 (542)
T ss_pred HHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccc-cCceEEEEEcC--CCHHHHHH
Confidence 9988888999999999998899999999999999999999999999999877655555 78899887655 57888888
Q ss_pred HH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEe
Q 048242 330 MS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMR 408 (430)
Q Consensus 330 ~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~ 408 (430)
++ .+++++++.||+||++..+..+.. ....+++|++.+++ +++|+|++ +++++.| +.|||+++
T Consensus 312 ~~~~~~~~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gei~v~ 375 (542)
T PRK06155 312 FRERFGVDLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDEH-DQELPDG--EPGELLLR 375 (542)
T ss_pred HHHHcCCCEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECCC-CCCCCCC--CceEEEEe
Confidence 87 679999999999999876654321 12347899999999 99999987 9999998 89999999
Q ss_pred cC---cccccccCCcccchHhhhCC
Q 048242 409 GN---MVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 409 g~---~v~~gY~~~~~~t~~~f~dg 430 (430)
|+ +++.||+++++.+.+.|.+|
T Consensus 376 ~~~~~~~~~GY~~~~~~~~~~~~~~ 400 (542)
T PRK06155 376 ADEPFAFATGYFGMPEKTVEAWRNL 400 (542)
T ss_pred cCCccccchhhcCCHHHHHHhhcCC
Confidence 98 69999999999998887653
No 36
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.7e-51 Score=357.79 Aligned_cols=382 Identities=24% Similarity=0.322 Sum_probs=328.0
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
-|...++.+++.+++.++|+++|+++.++.+||+||.+++.++|..|.++|+++||+|.+-+||..++++++||++++|+
T Consensus 24 yW~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv 103 (542)
T COG1021 24 YWQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGV 103 (542)
T ss_pred cccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCc
Confidence 36688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccc-----cHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccC
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQ-----YFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSK 170 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (430)
.+|.--|.....++.+..+...++..|.+.. ....+.+.....+ ..+.+++.++...+
T Consensus 104 ~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~-------tlr~v~v~ge~~~~---------- 166 (542)
T COG1021 104 APVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP-------TLRHVIVAGEAEHP---------- 166 (542)
T ss_pred chhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC-------cceEEEEccCCCCc----------
Confidence 9998888888999999999999999998763 2334444544443 55667766543211
Q ss_pred CccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhh
Q 048242 171 GVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~g 250 (430)
......+...........+.+++++++.+-+.||||+||-+..||+.-.-++....+-+++...++.++.+|..|.+.
T Consensus 167 --~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfp 244 (542)
T COG1021 167 --SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFP 244 (542)
T ss_pred --chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCC
Confidence 112222222233333335677889999999999999999999999987777777777788999999999999999998
Q ss_pred hHH--HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHH
Q 048242 251 WCF--TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 251 l~~--~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 328 (430)
+.+ .+..++.|+++|+.++.++.....+|++++||+..++|.+...++...+....+ ++|||.+-+||+.+++++.+
T Consensus 245 lssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~-LsSLrllQVGGarl~~~~Ar 323 (542)
T COG1021 245 LSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERAD-LSSLRLLQVGGARLSATLAR 323 (542)
T ss_pred CCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCC-chheeEEeecCcccCHHHHh
Confidence 884 777888999999999999999999999999999999999999999998887777 99999999999999999999
Q ss_pred HHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEE
Q 048242 329 AMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVM 407 (430)
Q Consensus 329 ~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v 407 (430)
++. .+|+.+.+.|||.|. .+.+...+ +..+....+.|+|+....+++|+|.+ |+++++| |+|+|..
T Consensus 324 rv~~~lgC~LQQVFGMAEG--LvnyTRLD--------Dp~E~i~~TQGrPlsP~DEvrvvD~d-g~pv~pG--E~G~Llt 390 (542)
T COG1021 324 RVPAVLGCQLQQVFGMAEG--LVNYTRLD--------DPPEIIIHTQGRPLSPDDEVRVVDAD-GNPVAPG--EVGELLT 390 (542)
T ss_pred hchhhhCchHHHHhhhhhh--hhcccccC--------CchHheeecCCCcCCCcceeEEecCC-CCCCCCC--Ccceeee
Confidence 998 789999999999994 44444332 33445667899999988899999999 9999999 9999999
Q ss_pred ecCcccccccCCcccchHhh-hCC
Q 048242 408 RGNMVMKGYLKNPKANEEAF-ANG 430 (430)
Q Consensus 408 ~g~~v~~gY~~~~~~t~~~f-~dg 430 (430)
|||..++|||+-|+-++..| .||
T Consensus 391 RGPYTirGYyrap~HNa~aF~a~G 414 (542)
T COG1021 391 RGPYTIRGYYRAPEHNARAFDADG 414 (542)
T ss_pred cCCeeeeeeccCchhhhhccCcCC
Confidence 99999999999999999999 565
No 37
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=4.2e-50 Score=400.95 Aligned_cols=381 Identities=21% Similarity=0.247 Sum_probs=295.1
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCe----------eeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHH
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESK----------HYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVH 87 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~----------~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~ 87 (430)
...++.++|++.++++|+++|+++.+. ++||+||.++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 4 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~ 83 (552)
T PRK09274 4 SMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALT 83 (552)
T ss_pred hhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHH
Confidence 456788999999999999999998654 8999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 88 FGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 88 lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
|||+++|++++|++|.++.+++.++++.++++++|++.+.. .......... .....++.++...
T Consensus 84 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-~~~~~~~~~~------~~~~~~i~~~~~~--------- 147 (552)
T PRK09274 84 FALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAH-LARRLFGWGK------PSVRRLVTVGGRL--------- 147 (552)
T ss_pred HHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHH-HHHHHhccCc------cchhheecccccc---------
Confidence 99999999999999999999999999999999999875211 1111100000 0122233332210
Q ss_pred ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchh
Q 048242 168 LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFH 247 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h 247 (430)
..+...+.++...............++++++|+|||||||.||+|+++|.++...+......+++..+++.++.+|++|
T Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~ 226 (552)
T PRK09274 148 -LWGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFA 226 (552)
T ss_pred -ccCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHH
Confidence 0111234443322111111122346789999999999999999999999999998888888889999999999999988
Q ss_pred hhhhHHHHHHHhhcceEEEeC-------CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCC
Q 048242 248 GNGWCFTWSLAALCGTSVMLR-------QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGS 320 (430)
Q Consensus 248 ~~gl~~~~~~l~~g~~~v~~~-------~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~ 320 (430)
.+++ ..|+++++.+ .+++..+++.|+++++|+++++|++++.+.+.......+ +++||.+++||+
T Consensus 227 ~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~ 298 (552)
T PRK09274 227 LFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIK-LPSLRRVISAGA 298 (552)
T ss_pred hhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCC-CchhhEEEecCC
Confidence 6553 3577777653 468899999999999999999999999999876544455 899999999999
Q ss_pred CCCHHHHHHHH-hc--CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCC-------
Q 048242 321 PPPPPILLAMS-QK--GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTK------- 390 (430)
Q Consensus 321 ~l~~~~~~~~~-~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~------- 390 (430)
++++++.++++ .+ ++++++.||+||++++++....... .............++|+|++++ +++|+|++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~-~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~ 376 (552)
T PRK09274 299 PVPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREIL-FATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEW 376 (552)
T ss_pred cCCHHHHHHHHHHcCCCceEEccccccccceeEeecchhhh-ccccccccCCCCcccCccCCCc-eEEEEeccccccccc
Confidence 99999999998 45 5799999999999876554321100 0000000011224799999999 99999953
Q ss_pred -CCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 391 -TNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 391 -~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
++++++.| +.|||+++|++++.|||++++.|...|
T Consensus 377 ~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~ 412 (552)
T PRK09274 377 DDALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAK 412 (552)
T ss_pred cccccCCCC--CeeEEEEecCcccccccCChHHhhhhh
Confidence 36788888 899999999999999999999998876
No 38
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-49 Score=396.01 Aligned_cols=385 Identities=18% Similarity=0.236 Sum_probs=303.8
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
.++.++|++.++.+|+++|+++.++++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v 103 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVV 103 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEe
Confidence 489999999999999999999988999999999999999999997 5999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCC--Cc-------------
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDR--AP------------- 163 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~------------- 163 (430)
|++|..+.+++.++++.++++++|++.+....+.+..... ..+.++..+...... ..
T Consensus 104 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (562)
T PRK05677 104 NTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT--------GVKHVIVTEVADMLPPLKRLLINAVVKHVKKM 175 (562)
T ss_pred ecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc--------CcceeEEecccccccchhhhhcccchhhcccc
Confidence 9999999999999999999999999877655444432211 122233222110000 00
Q ss_pred ccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC--CC-CCCEEE
Q 048242 164 LEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG--MK-EGAVYL 240 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~--~~-~~~~~~ 240 (430)
...........+.+.+..............++++++++|||||||+||+|+++|+++...+......+. +. ..++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 176 VPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred ccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 000000112334444433322221223456789999999999999999999999999877665555443 33 346889
Q ss_pred eccCchhhhhhHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeec
Q 048242 241 WTLPIFHGNGWCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTG 318 (430)
Q Consensus 241 ~~~pl~h~~gl~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~ 318 (430)
+.+|++|.+++.. .+..+..|++.++.+ .+++..+++.|+++++|+++++|+++..+.........+ ++++|.+++|
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~v~~g 334 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLD-FSALKLTLSG 334 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCC-hhhceEEEEc
Confidence 9999999999874 555566777766664 578999999999999999999999999998765444444 7899999999
Q ss_pred CCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
|+++++++.++|+ .+++++++.||+||+++.+..+... ....+++|+|++++ +++|+|++ +++++.
T Consensus 335 G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~~-~~~~~~ 401 (562)
T PRK05677 335 GMALQLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDDD-GNELPL 401 (562)
T ss_pred CccCCHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECCC-CCCCCC
Confidence 9999999999998 4599999999999987766543321 11347899999999 99999987 899999
Q ss_pred CCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 398 DGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 398 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
| +.|||+++|++++.||+++++.|.+.|.
T Consensus 402 g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~ 430 (562)
T PRK05677 402 G--EVGELCVKGPQVMKGYWQRPEATDEILD 430 (562)
T ss_pred C--CCeEEEEecCccchhhcCCchhhhhccC
Confidence 8 8999999999999999999999998884
No 39
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1.2e-49 Score=397.69 Aligned_cols=377 Identities=21% Similarity=0.265 Sum_probs=297.0
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECC--eeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYES--KHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..++.+.+... +.+|+++|+++.. .++||+||.++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|+
T Consensus 39 ~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 117 (560)
T PLN02574 39 NLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGG 117 (560)
T ss_pred CCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCe
Confidence 34444444333 6789999999854 479999999999999999998 8999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++|..+.+++.++++.+++++++++.+....+... . ..++.+++...... .......|
T Consensus 118 v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------------~-~~~~~~~~~~~~~~-----~~~~~~~~ 179 (560)
T PLN02574 118 IVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------------G-VPVIGVPENYDFDS-----KRIEFPKF 179 (560)
T ss_pred EEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------------C-CcEEecCccccccc-----CccCcccH
Confidence 999999999999999999999999999987654443221 1 12222221100000 00122345
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh----hcC-CCCCCEEEeccCchhhhh
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL----TWG-MKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~----~~~-~~~~~~~~~~~pl~h~~g 250 (430)
.+++....... ......++++++++|||||||.||+|+++|+++...+..... .+. ...+++++..+|++|.+|
T Consensus 180 ~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 258 (560)
T PLN02574 180 YELIKEDFDFV-PKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYG 258 (560)
T ss_pred HHHhhcCCccc-ccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHH
Confidence 55444332221 123346789999999999999999999999999887765543 122 235678899999999999
Q ss_pred hHH-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC-CCCCCCCceeEEeecCCCCCHHHHH
Q 048242 251 WCF-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE-DTILPLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 251 l~~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~ 328 (430)
+.. .+.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+.... ...+ +++||.+++||+++++++.+
T Consensus 259 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~-~~~lr~~~~gg~~l~~~~~~ 337 (560)
T PLN02574 259 LSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEV-LKSLKQVSCGAAPLSGKFIQ 337 (560)
T ss_pred HHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCc-cccceEEEEecccCCHHHHH
Confidence 875 45566779999999889999999999999999999999999999987543 2344 88999999999999999999
Q ss_pred HHH-hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEE
Q 048242 329 AMS-QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVV 406 (430)
Q Consensus 329 ~~~-~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~ 406 (430)
+++ .+ ++++++.||+||++..++.....+ .....+++|++.+++ +++|+|++++++++.| +.|||+
T Consensus 338 ~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~ 405 (560)
T PLN02574 338 DFVQTLPHVDFIQGYGMTESTAVGTRGFNTE---------KLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELW 405 (560)
T ss_pred HHHHHCCCCcEEecccccccCceeecCCCcc---------ccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEE
Confidence 988 55 789999999999976544322111 112357899999999 9999997779999998 899999
Q ss_pred EecCcccccccCCcccchHhhh
Q 048242 407 MRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 407 v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
|+|++++.|||+|++.|++.|.
T Consensus 406 v~g~~~~~GY~~~~~~t~~~~~ 427 (560)
T PLN02574 406 IQGPGVMKGYLNNPKATQSTID 427 (560)
T ss_pred EECcchhhhhcCChhHhhhhcc
Confidence 9999999999999999998873
No 40
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-49 Score=398.90 Aligned_cols=376 Identities=19% Similarity=0.261 Sum_probs=307.9
Q ss_pred HHHHHHHHHh-hCCCcceEEECC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 22 PLWFLERAAT-VHPTRKSVVYES----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 22 ~~~~l~~~~~-~~p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..+.+++++. .+|+++|+.+.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 4467887776 579999998743 68999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchh
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYE 176 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
++|+++.++++++.++++.+++++++++......... ... +....++.+++... ...+...+.
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~--------~~~~~~~~~ 187 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDL-------PSLKHVLLVGEDVE--------EGPGTLDFN 187 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcC-------CCceEEEEECCCcC--------CCcCccCHH
Confidence 9999999999999999999999999998765443221 111 13344555543211 112334566
Q ss_pred hhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhH-HHH
Q 048242 177 KLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWC-FTW 255 (430)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~-~~~ 255 (430)
+.+....... ......++++++++|||||||.||+|+++|.++...+......+++..+|++++..|++|.+|.. .++
T Consensus 188 ~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~ 266 (570)
T PRK04319 188 ALMEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIF 266 (570)
T ss_pred HHHhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHH
Confidence 6554433221 11334678999999999999999999999999988888777788889999999999999998866 577
Q ss_pred HHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-
Q 048242 256 SLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS- 331 (430)
Q Consensus 256 ~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~- 331 (430)
.++..|+++++.. .+++..+++.|+++++|+++++|++++.+.+.... ...+ +++||.++++|+++++++.++++
T Consensus 267 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~~~ 345 (570)
T PRK04319 267 APWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYD-LSSLRHILSVGEPLNPEVVRWGMK 345 (570)
T ss_pred HHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCC-cccceEEEEcccCCCHHHHHHHHH
Confidence 8888999988875 58999999999999999999999999999876432 2334 88999999999999999999998
Q ss_pred hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec--
Q 048242 332 QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG-- 409 (430)
Q Consensus 332 ~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g-- 409 (430)
.++.++++.||+||+++.+....... ....+++|+|++++ +++|+|++ +++++.| +.|||+++|
T Consensus 346 ~~g~~i~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~~~~ 411 (570)
T PRK04319 346 VFGLPIHDNWWMTETGGIMIANYPAM----------DIKPGSMGKPLPGI-EAAIVDDQ-GNELPPN--RMGNLAIKKGW 411 (570)
T ss_pred HhCCCeEeceeecccCCEEEecCCCC----------CCCCCcCcCCCCCC-EEEEECCC-CCCCCCC--CceEEEEcCCC
Confidence 57999999999999986654332211 11347899999999 99999987 8888888 899999997
Q ss_pred CcccccccCCcccchHhhhCC
Q 048242 410 NMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~dg 430 (430)
++++.|||++++.+.+.|.||
T Consensus 412 ~~~~~GY~~~~~~~~~~~~~g 432 (570)
T PRK04319 412 PSMMRGIWNNPEKYESYFAGD 432 (570)
T ss_pred ChHHhHhcCCHHHhhhhhcCC
Confidence 899999999999999988654
No 41
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-49 Score=395.10 Aligned_cols=380 Identities=23% Similarity=0.325 Sum_probs=317.0
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
-.+++.+.+++.++.+|+++|+++.++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 15 ~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~ 94 (542)
T PRK07786 15 RRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAIA 94 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|+++..+.+++.++++.+++++++++......+.......+ ....++.+++.. ..+...+.+
T Consensus 95 vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~----------~~~~~~~~~ 157 (542)
T PRK07786 95 VPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP-------LLSTVVVAGGSS----------DDSVLGYED 157 (542)
T ss_pred EEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC-------ccceEEEecCCC----------cccccCHHH
Confidence 999999999999999999999999998876655443322222 334455544321 122345666
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCC-CCCCEEEeccCchhhhhhHHHHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGM-KEGAVYLWTLPIFHGNGWCFTWS 256 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~-~~~~~~~~~~pl~h~~gl~~~~~ 256 (430)
++........ ......+++++++|||||||.||+|.++|+++...+......+++ ..++++++..|++|.+|+..++.
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 236 (542)
T PRK07786 158 LLAEAGPAHA-PVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLP 236 (542)
T ss_pred HhhccCCCCC-CCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHH
Confidence 5544332221 234556789999999999999999999999998888877777776 67889999999999999988888
Q ss_pred HHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc
Q 048242 257 LAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK 333 (430)
Q Consensus 257 ~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~ 333 (430)
++..|+++++.+ .+++..+++.++++++|+++++|+++..+......... ..++|.+++||+++++++.++++ .+
T Consensus 237 ~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~--~~~lr~i~~gg~~~~~~~~~~~~~~~ 314 (542)
T PRK07786 237 GLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPR--DLALRVLSWGAAPASDTLLRQMAATF 314 (542)
T ss_pred HHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCcc--CcceEEEEECCCCCCHHHHHHHHHHc
Confidence 999999999875 57999999999999999999999999999987654433 23799999999999999999998 55
Q ss_pred -CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcc
Q 048242 334 -GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMV 412 (430)
Q Consensus 334 -~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v 412 (430)
+.++++.||+||+++..+.+... ......+++|+|++++ .++|+|++ ++.++.+ +.|||+++|+.+
T Consensus 315 ~~~~l~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 381 (542)
T PRK07786 315 PEAQILAAFGQTEMSPVTCMLLGE---------DAIRKLGSVGKVIPTV-AARVVDEN-MNDVPVG--EVGEIVYRAPTL 381 (542)
T ss_pred CCCeEEeeecccccccceEecCcc---------cccccCCCccccCCCc-eEEEECCC-CCCCcCC--CceEEEEEChhh
Confidence 89999999999997665433211 1123447899999999 89999977 8999988 899999999999
Q ss_pred cccccCCcccchHhhhCC
Q 048242 413 MKGYLKNPKANEEAFANG 430 (430)
Q Consensus 413 ~~gY~~~~~~t~~~f~dg 430 (430)
+.||+++++.+.+.|.+|
T Consensus 382 ~~gy~~~~~~~~~~f~~~ 399 (542)
T PRK07786 382 MSGYWNNPEATAEAFAGG 399 (542)
T ss_pred hhhhcCCHHHHHHHhhCC
Confidence 999999999999888653
No 42
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=3.2e-49 Score=391.73 Aligned_cols=378 Identities=24% Similarity=0.299 Sum_probs=314.2
Q ss_pred CHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec
Q 048242 21 TPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI 100 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 100 (430)
++.++|++.++.+|+++|+.+.++++||+||.+++.++|+.|.+.|+++|++|+++++|++++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhh
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLE 180 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
++..+.+++..+++.+++++++++.+....+........ ....++.+++...... .......|+++..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 148 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH-------DLRTLILVGEPAHASE-----GGGESPSWPKLLA 148 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc-------ccceEEEecCcccccC-----CccccccHHHhhc
Confidence 999999999999999999999998876555444332221 3344555554321110 1122345555544
Q ss_pred cCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhh
Q 048242 181 TGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAAL 260 (430)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~ 260 (430)
..... .......+++++++|||||||.||+|.+||.++...+......+.+..+|++++.+|++|.+++..++.++..
T Consensus 149 ~~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~ 226 (515)
T TIGR03098 149 LGDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYV 226 (515)
T ss_pred ccccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHc
Confidence 32221 1123456789999999999999999999999999888887778888999999999999999999988999999
Q ss_pred cceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-CcEEE
Q 048242 261 CGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK-GFRVT 338 (430)
Q Consensus 261 g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~-~~~v~ 338 (430)
|+++++.+.+++..+++.++++++|++.++|+++..+.+..... .+ ++++|.++++|+++++.+.++++ .+ +..++
T Consensus 227 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-~~-~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~ 304 (515)
T TIGR03098 227 GATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPE-SA-APSLRYLTNSGGAMPRATLSRLRSFLPNARLF 304 (515)
T ss_pred CCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCC-CC-ccceEEEEecCCcCCHHHHHHHHHHCCCCeEe
Confidence 99999998899999999999999999999999999998753322 23 78999999999999999999998 45 78999
Q ss_pred eeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccC
Q 048242 339 HVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLK 418 (430)
Q Consensus 339 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~ 418 (430)
+.||+||++....... .....+.+++|+|++++ +++|+|++ ++.++.+ +.|||+++|+.++.|||+
T Consensus 305 ~~YG~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~gy~~ 370 (515)
T TIGR03098 305 LMYGLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRED-GSECAPG--EEGELVHRGALVAMGYWN 370 (515)
T ss_pred eeeccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECCC-CCCCCCC--CceEEEEcCchhhccccC
Confidence 9999999865433211 11123457899999999 89999977 8999888 899999999999999999
Q ss_pred CcccchHhhh
Q 048242 419 NPKANEEAFA 428 (430)
Q Consensus 419 ~~~~t~~~f~ 428 (430)
+++.+.+.|.
T Consensus 371 ~~~~~~~~~~ 380 (515)
T TIGR03098 371 DPEKTAERFR 380 (515)
T ss_pred Cchhhhhhhh
Confidence 9999887763
No 43
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-49 Score=393.19 Aligned_cols=388 Identities=24% Similarity=0.325 Sum_probs=313.0
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcC
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTG 94 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 94 (430)
++....++.++|.+.++.+|+++|+++.++++||+||.+++.++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 2 ~~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G 81 (528)
T PRK07470 2 MSRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLG 81 (528)
T ss_pred CcccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCC
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccc
Q 048242 95 AVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTE 174 (430)
Q Consensus 95 ~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
++++|+++..+.+++.++++.++++.++++.+............. ....++.++... ....
T Consensus 82 ~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~------------~~~~ 142 (528)
T PRK07470 82 AVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP-------DLTHVVAIGGAR------------AGLD 142 (528)
T ss_pred eEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC-------cCceEEEeCCCc------------cccc
Confidence 999999999999999999999999999999877655544433222 234455544321 1134
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc--CCCCCCEEEeccCchhhhhhH
Q 048242 175 YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW--GMKEGAVYLWTLPIFHGNGWC 252 (430)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~pl~h~~gl~ 252 (430)
+.+++..............++++++|+|||||||.||+|+++|.++...+......+ +....|+++..+|++|.+++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~ 222 (528)
T PRK07470 143 YEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH 222 (528)
T ss_pred HHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH
Confidence 555544322222222345678999999999999999999999999865544332222 467889999999999999987
Q ss_pred HHHHHHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHH
Q 048242 253 FTWSLAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAM 330 (430)
Q Consensus 253 ~~~~~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~ 330 (430)
..+ .+..|++.++.+ .+++..+++.|+++++|+++++|++++.+.........+ ++++|.+++||+++++.+.+++
T Consensus 223 ~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~~ 300 (528)
T PRK07470 223 QLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYD-HSSLRYVIYAGAPMYRADQKRA 300 (528)
T ss_pred HHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCC-CcceEEEEEcCCCCCHHHHHHH
Confidence 544 566788877764 578999999999999999999999999999877655556 8999999999999999999888
Q ss_pred H-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 331 S-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 331 ~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
. .++.++++.||+||+++.++.+..... .. ........+++|+|.+++ +++|+|++ +++++.| +.|||+++|
T Consensus 301 ~~~~g~~~~~~YG~TE~~~~~~~~~~~~~--~~-~~~~~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~i~~ 373 (528)
T PRK07470 301 LAKLGKVLVQYFGLGEVTGNITVLPPALH--DA-EDGPDARIGTCGFERTGM-EVQIQDDE-GRELPPG--ETGEICVIG 373 (528)
T ss_pred HHHhCcHHHHhCCCcccCCceeecchhhc--cc-cccccceeeccCcccCCc-EEEEECCC-CCCCCCC--CceEEEEeC
Confidence 7 678899999999999876654432100 00 000122457899999999 89999987 9999988 899999999
Q ss_pred CcccccccCCcccchHhhhCC
Q 048242 410 NMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~dg 430 (430)
++++.||+++++.+.+.|.||
T Consensus 374 ~~~~~gy~~~~~~~~~~~~~~ 394 (528)
T PRK07470 374 PAVFAGYYNNPEANAKAFRDG 394 (528)
T ss_pred CccchhhcCCHHHHHhhhcCC
Confidence 999999999999998887554
No 44
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-48 Score=389.76 Aligned_cols=403 Identities=54% Similarity=0.969 Sum_probs=317.2
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
...++++.+.|++.++.+|+++|+++.+..+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~ 93 (545)
T PRK08162 14 NYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGA 93 (545)
T ss_pred ccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCc
Confidence 34467899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++|..+.+++.++++.++++.++++.+....+.+.....+ . ...+.++....... .....+..++
T Consensus 94 ~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~---~~~~~~~~~~ 162 (545)
T PRK08162 94 VLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP-------G-PKPLVIDVDDPEYP---GGRFIGALDY 162 (545)
T ss_pred EEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC-------C-CceEEEecCccccc---cCCCcccccH
Confidence 99999999999999999999999999999887766655543332 1 21222322110000 0011233456
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
.+++....+......+...+++++|+|||||||.||+|+++|+++..........+.+..++++++.+|++|.+++...+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~ 242 (545)
T PRK08162 163 EAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPW 242 (545)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHH
Confidence 66655433332222233456899999999999999999999999877766666667788899999999999999988766
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCc
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGF 335 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 335 (430)
...+.|++.++...+++..+++.++++++|+++++|++++.+++........ +.+++.++++|+.+++.+.+.++++++
T Consensus 243 ~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~ 321 (545)
T PRK08162 243 TVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAG-IDHPVHAMVAGAAPPAAVIAKMEEIGF 321 (545)
T ss_pred HHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccC-CccceEEEECCCCCCHHHHHHHHHhCC
Confidence 6666788888888899999999999999999999999999999875544333 566777889999999999999988899
Q ss_pred EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccc
Q 048242 336 RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKG 415 (430)
Q Consensus 336 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~g 415 (430)
++++.||+||+++.++.+...+.+...+.........++|.+.+....++|+|++++++++.++++.|||+++|++++.|
T Consensus 322 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~g 401 (545)
T PRK08162 322 DLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKG 401 (545)
T ss_pred ceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhh
Confidence 99999999999766665543333322222222223356777766553688999876888876543579999999999999
Q ss_pred ccCCcccchHhhhCC
Q 048242 416 YLKNPKANEEAFANG 430 (430)
Q Consensus 416 Y~~~~~~t~~~f~dg 430 (430)
|+++++.+...|.+|
T Consensus 402 Y~~~~~~~~~~~~~g 416 (545)
T PRK08162 402 YLKNPKATEEAFAGG 416 (545)
T ss_pred hcCChhhhHHHhhCC
Confidence 999999999998654
No 45
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-49 Score=390.10 Aligned_cols=384 Identities=26% Similarity=0.336 Sum_probs=319.6
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
...++.++|.+.++.+|+++|+++.++.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~ 88 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVH 88 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 35679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|+++..+.+++.++++.+++++++++.+....+.+...... ...+........ .........+.+
T Consensus 89 v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~------~~~~~~~~~~~~ 154 (523)
T PRK08316 89 VPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--------VDTLILSLVLGG------REAPGGWLDFAD 154 (523)
T ss_pred EecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--------ccceeeeecccc------cccccchhhHHH
Confidence 999999999999999999999999999887666554432211 011111110000 011123345555
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWS 256 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~ 256 (430)
........ ........+++++++|||||||.||+|.++|.++..........+++..++++++.+|++|..++.. ++.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~ 233 (523)
T PRK08316 155 WAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGP 233 (523)
T ss_pred HHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHH
Confidence 44433222 1223456789999999999999999999999999888887888888999999999999999999875 445
Q ss_pred HHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHh-c-C
Q 048242 257 LAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQ-K-G 334 (430)
Q Consensus 257 ~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~-~ 334 (430)
++..|+++++.+.+++..+++.++++++|+++++|.++..+.+.......+ ++++|.+++||++++.++.+.+++ + +
T Consensus 234 ~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~~~ 312 (523)
T PRK08316 234 YLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRD-LSSLRKGYYGASIMPVEVLKELRERLPG 312 (523)
T ss_pred HHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCC-cccceEEEEcCCcCCHHHHHHHHHHcCC
Confidence 677899999998889999999999999999999999999999887665556 899999999999999999999984 5 7
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
.++++.||+||++.+++.+...+ .....+++|+|++++ +++|.|++ +++++.| +.|||+++|++++.
T Consensus 313 ~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gei~v~~~~~~~ 379 (523)
T PRK08316 313 LRFYNCYGQTEIAPLATVLGPEE---------HLRRPGSAGRPVLNV-ETRVVDDD-GNDVAPG--EVGEIVHRSPQLML 379 (523)
T ss_pred CceeeeecccccCccccccCccc---------cccccCCcccCCCCc-EEEEEcCC-CCCCCCC--CcceEEEECCchhh
Confidence 89999999999987766543321 122357899999999 89999987 8999988 89999999999999
Q ss_pred cccCCcccchHhhhCC
Q 048242 415 GYLKNPKANEEAFANG 430 (430)
Q Consensus 415 gY~~~~~~t~~~f~dg 430 (430)
||+++++.+.+.|.+|
T Consensus 380 ~y~~~~~~~~~~~~~~ 395 (523)
T PRK08316 380 GYWDDPEKTAEAFRGG 395 (523)
T ss_pred hhcCCHHHHHHHhhCC
Confidence 9999999998888654
No 46
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.3e-49 Score=399.66 Aligned_cols=381 Identities=17% Similarity=0.252 Sum_probs=300.0
Q ss_pred HHHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 22 PLWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..+.|+++++.+|+++|+++.+ +++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 59 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 138 (625)
T TIGR02188 59 SYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGA 138 (625)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 4577778888899999999743 5899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccH---------HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYF---------ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEY 166 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (430)
+++|++|.++.+++.++++.++++++|+++... ..+.+.....+. ....++.++.......
T Consensus 139 v~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~---- 208 (625)
T TIGR02188 139 IHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV------SVEHVLVVRRTGNPVP---- 208 (625)
T ss_pred EEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC------CccEEEEEcCCCCCcC----
Confidence 999999999999999999999999999987532 222222221110 1234555443211100
Q ss_pred cccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHH-HHHhhcCCCCCCEEEeccCc
Q 048242 167 ALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSL-NVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~pl 245 (430)
........+++++...... .......++++++|+|||||||+||||+++|.++..... .....+++..+|++++..|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 287 (625)
T TIGR02188 209 WVEGRDVWWHDLMAKASAY-CEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADV 287 (625)
T ss_pred ccccccccHHHHHhhcCCC-CCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCc
Confidence 0011123455555443222 122345678999999999999999999999999765443 34445678899999999999
Q ss_pred hhhhhhH-HHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeec
Q 048242 246 FHGNGWC-FTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTG 318 (430)
Q Consensus 246 ~h~~gl~-~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~ 318 (430)
+|+.+.. .++.++..|+++++++. +++..+++.++++++|+++++|++++.+.+.... ...+ +++||.++++
T Consensus 288 ~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~i~~~ 366 (625)
T TIGR02188 288 GWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHD-LSSLRLLGSV 366 (625)
T ss_pred hhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCC-ccceeEEEEe
Confidence 9998865 47778899999999853 4799999999999999999999999999876532 2234 8899999999
Q ss_pred CCCCCHHHHHHHH-hcC---cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKG---FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQP 394 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~ 394 (430)
|+++++++.++++ .++ +++++.||+||+++.++...... ...+.+++|+|++++ +++|+|++ |++
T Consensus 367 G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~---------~~~~~~~~G~p~~g~-~~~i~d~~-g~~ 435 (625)
T TIGR02188 367 GEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGA---------TPTKPGSATLPFFGI-EPAVVDEE-GNP 435 (625)
T ss_pred cCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCC---------CCcCCCcccCCcCCc-eEEEECCC-CCC
Confidence 9999999999998 444 78999999999987655432210 112457899999999 99999976 999
Q ss_pred CC-CCCCceeEEEEec--CcccccccCCcccchHhh
Q 048242 395 IP-ADGKTIGEVVMRG--NMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 395 ~~-~~~~~~Gel~v~g--~~v~~gY~~~~~~t~~~f 427 (430)
++ .+ +.|||+++| |+++.|||++++.+.+.|
T Consensus 436 ~~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~ 469 (625)
T TIGR02188 436 VEGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTY 469 (625)
T ss_pred CCCCC--CeEEEEEccCCCcccccccCChHHHHHHH
Confidence 98 77 899999999 689999999999887765
No 47
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.3e-49 Score=399.41 Aligned_cols=379 Identities=19% Similarity=0.238 Sum_probs=299.7
Q ss_pred HHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 23 LWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 23 ~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
.+.|+++++.+|+++|+++.+ +++||+||.+++.++|+.|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 467888888999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccH---------HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYF---------ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
++|++|.++.+++.++++.++++++|+++... ..+.+.....+ ....++.++....... .
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~ 218 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP-------SVEKVIVVRRTGGDVD----W 218 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC-------CccEEEEEcCCCCCcC----c
Confidence 99999999999999999999999999976542 22222222221 3345555543211000 0
Q ss_pred ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHH-HHHhhcCCCCCCEEEeccCch
Q 048242 168 LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSL-NVVLTWGMKEGAVYLWTLPIF 246 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~pl~ 246 (430)
.......+.+++...... .......++++++|+|||||||+||||+++|.+++.... .....+++..+|++++..|++
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 297 (637)
T PRK00174 219 VEGRDLWWHELVAGASDE-CEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVG 297 (637)
T ss_pred CCCCcccHHHHHhhcCCC-CCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCch
Confidence 011223455555432221 122345678999999999999999999999999865443 344456788899999999999
Q ss_pred hhhhhH-HHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecC
Q 048242 247 HGNGWC-FTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGG 319 (430)
Q Consensus 247 h~~gl~-~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G 319 (430)
|..+.. .++.++..|+++++.+. +++..+++.|+++++|+++++|++++.+.+.... ...+ +++||.++++|
T Consensus 298 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~~G 376 (637)
T PRK00174 298 WVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYD-LSSLRLLGSVG 376 (637)
T ss_pred HhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCC-ccceeEEEEeC
Confidence 998875 57778899999998753 4789999999999999999999999999876532 2234 78999999999
Q ss_pred CCCCHHHHHHHH-hcC---cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCC
Q 048242 320 SPPPPPILLAMS-QKG---FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPI 395 (430)
Q Consensus 320 ~~l~~~~~~~~~-~~~---~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~ 395 (430)
+++++++.++++ .++ +++++.||+||+++.++...... ...+.+++|+|++++ +++|+|++ ++++
T Consensus 377 e~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~~-g~~~ 445 (637)
T PRK00174 377 EPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDEE-GNPL 445 (637)
T ss_pred CCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECCC-CCCC
Confidence 999999999887 454 78999999999987655332210 012347899999999 99999987 9999
Q ss_pred CCCCCceeEEEEec--CcccccccCCcccchHhh
Q 048242 396 PADGKTIGEVVMRG--NMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 396 ~~~~~~~Gel~v~g--~~v~~gY~~~~~~t~~~f 427 (430)
+.| +.|||+|+| |++++|||++++.+.+.|
T Consensus 446 ~~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~ 477 (637)
T PRK00174 446 EGG--EGGNLVIKDPWPGMMRTIYGDHERFVKTY 477 (637)
T ss_pred CCC--CcEEEEEcCCCCcccccccCCHHHHHHhh
Confidence 988 899999999 699999999999887765
No 48
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-50 Score=468.24 Aligned_cols=364 Identities=18% Similarity=0.200 Sum_probs=310.4
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|+++++++|+++|+++.++++||+||.++++++|+.|.++|+++|++|+|+++|++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.+++++++++......+... ....++.++....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~------------~~~~~~~~~~~~~------------------- 3222 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP------------AGDTALTLDRLDL------------------- 3222 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc------------cCCceeeecchhh-------------------
Confidence 999999999999999999999999987653322110 1122233322110
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
.............++++++|+|||||||+||||+++|+++.+.+.+....++++.+|+++...|++|..++...+.++
T Consensus 3223 --~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 3300 (3956)
T PRK12467 3223 --NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTL 3300 (3956)
T ss_pred --cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHH
Confidence 001111111335678999999999999999999999999999999999999999999999999999999998999999
Q ss_pred hhcceEEEeCC--CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHh-c-C
Q 048242 259 ALCGTSVMLRQ--ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQ-K-G 334 (430)
Q Consensus 259 ~~g~~~v~~~~--~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~-~ 334 (430)
+.|+++++.+. +++..+++.|+++++|+++++|++++.+.+.... .+ +++||.+++||+++++++.++|++ + +
T Consensus 3301 ~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--~~-~~~lr~~~~gGe~~~~~~~~~~~~~~~~ 3377 (3956)
T PRK12467 3301 ICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGG--AD-CASLDIYVFGGEAVPPAAFEQVKRKLKP 3377 (3956)
T ss_pred hCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccc--cC-CCCceEEEEecCCCCHHHHHHHHHhCCC
Confidence 99999999875 7899999999999999999999999999875422 23 789999999999999999999984 4 6
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
+.++|.||+||+++.++......+ ........++|+|++|+ +++|+|.+ +++++.| ++|||+|+|+++++
T Consensus 3378 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~~-~~~vp~G--~~GEL~i~G~~v~~ 3447 (3956)
T PRK12467 3378 RGLTNGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDGQ-LNPVPVG--VAGELYIGGVGLAR 3447 (3956)
T ss_pred CEEEeCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECCC-CCCCCCC--CCceEEEcchhhhh
Confidence 889999999999877765433211 00112346899999999 99999987 9999999 99999999999999
Q ss_pred cccCCcccchHhhh
Q 048242 415 GYLKNPKANEEAFA 428 (430)
Q Consensus 415 gY~~~~~~t~~~f~ 428 (430)
||+|+|++|+++|.
T Consensus 3448 GY~~~~~~T~~~F~ 3461 (3956)
T PRK12467 3448 GYHQRPSLTAERFV 3461 (3956)
T ss_pred hccCCcccchhhcc
Confidence 99999999999994
No 49
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.4e-48 Score=387.68 Aligned_cols=376 Identities=21% Similarity=0.276 Sum_probs=305.9
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
+...++.++|++.++.+|+++|+++.++++||+||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 34567999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHH-----HHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCC
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFA-----LAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKG 171 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (430)
++++++..+.+++.++++.++++.++++..... .........+ ....++...+....
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~----------- 161 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLP-------TLRNIIVAGQTRVE----------- 161 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCC-------cceEEEEecCCCCc-----------
Confidence 999999999999999999999999999865321 1111111111 22333333221100
Q ss_pred ccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhh
Q 048242 172 VTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGW 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl 251 (430)
....+.+...... .......++++++++|||||||.||+|+++|.++..++......+.+..+|++++.+|++|.+++
T Consensus 162 -~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~ 239 (527)
T TIGR02275 162 -AELFLWLESPAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPL 239 (527)
T ss_pred -chhhHHhhCcCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhh
Confidence 0111111111111 11124567899999999999999999999999999888888888889999999999999999998
Q ss_pred HH--HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHH
Q 048242 252 CF--TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 252 ~~--~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 329 (430)
.. .+.++..|+++++.+.+++..+++.++++++|+++++|.+++.+.+.......+ ++++|.+++||+++++++.++
T Consensus 240 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~l~~~~~~~ 318 (527)
T TIGR02275 240 SSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYD-LSSLKLLQVGGAKFSEAAARR 318 (527)
T ss_pred hHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCC-ccceEEEEEcCCCCCHHHHHH
Confidence 74 677788899998888889999999999999999999999999998877655555 899999999999999999999
Q ss_pred HH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccc-cccceEEeeCCCCCCCCCCCCceeEEEE
Q 048242 330 MS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCM-CLEGLDVLDTKTNQPIPADGKTIGEVVM 407 (430)
Q Consensus 330 ~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~-~~~~~~v~d~~~~~~~~~~~~~~Gel~v 407 (430)
++ .++.++++.||+||++....... .. .....+++|+|++ +. +++|+|++ +++++.| +.|||++
T Consensus 319 ~~~~~g~~~~~~YG~tE~~~~~~~~~-~~---------~~~~~~~~G~~~~~~~-~v~i~d~~-g~~~~~g--~~Gei~v 384 (527)
T TIGR02275 319 VPAVFGCQLQQVFGMAEGLVNYTRLD-DP---------AEIIFTTQGRPMSPDD-EVRVVDDH-GNPVAPG--ETGMLLT 384 (527)
T ss_pred HHHHhCCeEEeeeccCccCccccCCC-Cc---------cccccccCCCCCCCCc-eEEEECCC-CCCCCCC--CceEEEe
Confidence 98 57999999999999653332111 00 0123468999995 67 89999987 8999988 8999999
Q ss_pred ecCcccccccCCcccchHhh
Q 048242 408 RGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 408 ~g~~v~~gY~~~~~~t~~~f 427 (430)
+|++++.|||++++.+.+.|
T Consensus 385 ~g~~~~~gY~~~~~~~~~~~ 404 (527)
T TIGR02275 385 RGPYTFRGYYKAPEHNAAAF 404 (527)
T ss_pred cCCccchhhcCChhHhHhhc
Confidence 99999999999999998887
No 50
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-49 Score=400.10 Aligned_cols=377 Identities=18% Similarity=0.151 Sum_probs=288.6
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHH
Q 048242 14 PANFTALTPLWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVH 87 (430)
Q Consensus 14 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~ 87 (430)
++.....++.++|++.++.+|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 43 ~~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 122 (624)
T PRK12582 43 PLGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMT 122 (624)
T ss_pred CCCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 334457789999999999999999998753 68999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCeeeeccccCCh-----hhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCC
Q 048242 88 FGVPMTGAVLNCINFRLNP-----LNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRA 162 (430)
Q Consensus 88 lA~~~~G~~~~~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 162 (430)
|||+++|++++|++|.++. +++.++++.++++++|+++... .......... ....++.++....
T Consensus 123 lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~--~~~~~~~~~~------~~~~~i~~~~~~~--- 191 (624)
T PRK12582 123 LAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAP--FARALAALDL------LDVTVVHVTGPGE--- 191 (624)
T ss_pred HHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHH--HHHHHHhhhh------cCceEEEEcCCCc---
Confidence 9999999999999999885 8999999999999999986421 1111111110 1122344432210
Q ss_pred cccccccCCccchhhhhhcCCCCC--CCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCC---CC
Q 048242 163 PLEYALSKGVTEYEKLLETGDPEF--AWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKE---GA 237 (430)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~---~~ 237 (430)
......+.++........ .......++++++|+|||||||.||||+++|+++...+......+.... .+
T Consensus 192 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~ 265 (624)
T PRK12582 192 ------GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPP 265 (624)
T ss_pred ------ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCc
Confidence 011234555443322110 0112345789999999999999999999999999887766655444443 57
Q ss_pred EEEeccCchhhhhhHH-HHHHHhhcceEEEeCC-CCH---HHHHHHHHhhCceEEeeccHHHHHHHcCCCCC----CCCC
Q 048242 238 VYLWTLPIFHGNGWCF-TWSLAALCGTSVMLRQ-ASA---KAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED----TILP 308 (430)
Q Consensus 238 ~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~~-~~~---~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~----~~~~ 308 (430)
++++++|++|.+|+.. ++.++..|+++++.+. +++ ..+++.++++++|+++++|.+++.+.+..... ..+
T Consensus 266 ~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~- 344 (624)
T PRK12582 266 VSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSF- 344 (624)
T ss_pred eEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHH-
Confidence 9999999999999875 5566778888888652 333 45677889999999999999999887643221 123
Q ss_pred CCceeEEeecCCCCCHHHHHHHHhc-------CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccc
Q 048242 309 LPHVVNVNTGGSPPPPPILLAMSQK-------GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCL 381 (430)
Q Consensus 309 l~~lr~v~~~G~~l~~~~~~~~~~~-------~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 381 (430)
+++||.+++||+++++++.+++++. ++++++.||+||+++++...... ..+.+++|+|++|+
T Consensus 345 ~~slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~ 413 (624)
T PRK12582 345 FKNLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV 413 (624)
T ss_pred hhheeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc
Confidence 6899999999999999999999853 36899999999997655432211 12357899999999
Q ss_pred cceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh-hCC
Q 048242 382 EGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF-ANG 430 (430)
Q Consensus 382 ~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f-~dg 430 (430)
+++|++. | +.|||+|+|++++.|||++|++|++.| .||
T Consensus 414 -~v~i~~~--------G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dg 452 (624)
T PRK12582 414 -ELKLAPV--------G--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEG 452 (624)
T ss_pred -EEEEccC--------C--CceEEEEECCcccccccCCccchhhhcCccC
Confidence 8998643 4 789999999999999999999999988 344
No 51
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.4e-49 Score=399.80 Aligned_cols=379 Identities=20% Similarity=0.253 Sum_probs=295.9
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
...++.++|++.++.+|+++|+++.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 44689999999999999999998732 5899999999999999999987 8999999999999999999999
Q ss_pred HhhhcCCeeeec-cccCC--hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccc
Q 048242 89 GVPMTGAVLNCI-NFRLN--PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLE 165 (430)
Q Consensus 89 A~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (430)
||+++|++++|+ ++..+ .+++.++++.++++++|++.+....+.......+.. ....++.++....
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~------ 166 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAK-----ERPRVIAVDAVPD------ 166 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhcccc-----ccceEEEcccccc------
Confidence 999999999999 45554 578999999999999999887655444332221100 1122333321100
Q ss_pred ccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCc
Q 048242 166 YALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl 245 (430)
... .. .......++++++|+|||||||.||||+++|+++...+......+++..++++++.+|+
T Consensus 167 ------------~~~---~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl 230 (631)
T PRK07769 167 ------------EVG---AT-WVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPF 230 (631)
T ss_pred ------------ccc---cc-cCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCC
Confidence 000 00 00113457899999999999999999999999999888888788888999999999999
Q ss_pred hhhhhhHHHHHHHhhcceEEEeCC--C--CHHHHHHHHHhhCc---eEEeeccHHHHHHHcC---CCC--CCCCCCCcee
Q 048242 246 FHGNGWCFTWSLAALCGTSVMLRQ--A--SAKAIYKAIAEHGV---TNFCAAPIVLNSIVNA---PPE--DTILPLPHVV 313 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~~v~~~~--~--~~~~~~~~l~~~~v---t~~~~~p~~l~~l~~~---~~~--~~~~~l~~lr 313 (430)
+|.+|+...+.+++.|++++++.. + ++..+++.+.++++ +++..+|.++..+... ... ...+ +++||
T Consensus 231 ~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~-l~~lr 309 (631)
T PRK07769 231 FHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLD-LSNVK 309 (631)
T ss_pred cCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcc-hhhee
Confidence 999999887888888999988853 4 88999999999986 7889999988776642 111 1234 89999
Q ss_pred EEeecCCCCCHHHHHHHH-hc---Cc---EEEeeecCccccccccccccCCCCCC--CCh--------------hhhhhh
Q 048242 314 NVNTGGSPPPPPILLAMS-QK---GF---RVTHVYGLSEINGPATVCAWNPNWDS--LPF--------------EAQARL 370 (430)
Q Consensus 314 ~v~~~G~~l~~~~~~~~~-~~---~~---~v~~~YG~tE~~~~~~~~~~~~~~~~--~~~--------------~~~~~~ 370 (430)
.+++||+++++++.++|. .+ |+ .+++.||+||++++++.......... ... ......
T Consensus 310 ~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 389 (631)
T PRK07769 310 GLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVA 389 (631)
T ss_pred eEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCcee
Confidence 999999999999999998 44 33 59999999998766554332111000 000 000112
Q ss_pred ccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 371 NARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 371 ~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
..++|+|.++. +++|+|++++++++.| +.|||+++|++++.|||+++++|+++|.
T Consensus 390 ~~s~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~ 444 (631)
T PRK07769 390 QVSAGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQ 444 (631)
T ss_pred EEeCCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHh
Confidence 35899999999 8999998779999988 8999999999999999999999999984
No 52
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.1e-48 Score=391.52 Aligned_cols=394 Identities=24% Similarity=0.328 Sum_probs=314.2
Q ss_pred CCCCCCCCCCHHHHHHHHHhhCCCcceEEE--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHH
Q 048242 12 KNPANFTALTPLWFLERAATVHPTRKSVVY--ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFG 89 (430)
Q Consensus 12 ~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA 89 (430)
+..+.....++.++|++.++.+|+++|+++ .++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++||
T Consensus 8 ~~~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la 87 (559)
T PRK08315 8 PTDVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFA 87 (559)
T ss_pred CCcCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHH
Confidence 344556677899999999999999999998 457899999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH-----HHHHHHHHHhhc------cCCCCCCCCeEEEecCCC
Q 048242 90 VPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF-----ALAEEALKIMEG------KSEGLFKPPVLIVIGDET 158 (430)
Q Consensus 90 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~~~i~~~~~~ 158 (430)
|+++|++++|++|..+.+++.++++.+++++++++.... ..+.+....... .....+....++.++...
T Consensus 88 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (559)
T PRK08315 88 TAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEK 167 (559)
T ss_pred HHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccC
Confidence 999999999999999999999999999999999987532 122221111100 000011222333333221
Q ss_pred CCCCcccccccCCccchhhhhhcCCC---C--CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCC
Q 048242 159 CDRAPLEYALSKGVTEYEKLLETGDP---E--FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGM 233 (430)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~ 233 (430)
..+...+.++...... . ........++++++++|||||||.||+|.++|.++..++......+++
T Consensus 168 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~ 237 (559)
T PRK08315 168 ----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKL 237 (559)
T ss_pred ----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCC
Confidence 1222344444332211 0 011123457889999999999999999999999999888888888899
Q ss_pred CCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCc
Q 048242 234 KEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPH 311 (430)
Q Consensus 234 ~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~ 311 (430)
..+|+++..+|++|.+++.. ++.++..|+++++. ..+++..+++.++++++|+++++|+++..++......... +++
T Consensus 238 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~ 316 (559)
T PRK08315 238 TEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFD-LSS 316 (559)
T ss_pred CCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCC-chh
Confidence 99999999999999999874 66677788888854 5689999999999999999999999999998876655555 899
Q ss_pred eeEEeecCCCCCHHHHHHHH-hcCc-EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeC
Q 048242 312 VVNVNTGGSPPPPPILLAMS-QKGF-RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDT 389 (430)
Q Consensus 312 lr~v~~~G~~l~~~~~~~~~-~~~~-~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~ 389 (430)
||.++++|+++++++.++++ .++. ++++.||+||++..++.+...+. ......++|+|++++ +++|+|+
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~v~i~d~ 387 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDP--------LEKRVTTVGRALPHL-EVKIVDP 387 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccc--------hhhccCCCCccCCCc-EEEEEcC
Confidence 99999999999999999998 5655 49999999999876554432211 112357899999999 9999999
Q ss_pred CCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 390 KTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 390 ~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
+++++++.| +.|||+|+|++++.|||++++.+.+.|
T Consensus 388 ~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~ 423 (559)
T PRK08315 388 ETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAI 423 (559)
T ss_pred ccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcC
Confidence 889999988 899999999999999999999988777
No 53
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.4e-49 Score=392.74 Aligned_cols=382 Identities=19% Similarity=0.228 Sum_probs=295.1
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
+..-+.++.+.|.+.++.+|+++|+++.+ +.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||++
T Consensus 9 ~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 9 MPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred cccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 33446689999999999999999998643 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
+|++++|+++.++.+++.++++.++++.+++++.............. . ...+.++......
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~----------- 149 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALH-------S-IPVIAVDIAAVTR----------- 149 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcccccccccc-------c-cceeEeecccccc-----------
Confidence 99999999999999999999999999999998765322211111111 1 1122232211000
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh----hcCCCCCCEEEeccCchhh
Q 048242 173 TEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL----TWGMKEGAVYLWTLPIFHG 248 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~h~ 248 (430)
.+.+...... ........++++++++|||||||.||||.++|+++.++...... .+....++++++.+|++|.
T Consensus 150 -~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~ 226 (540)
T PRK05857 150 -ESEHSLDAAS--LAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHI 226 (540)
T ss_pred -cccccccccc--cccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCcccc
Confidence 0000000000 01112346789999999999999999999999999776543321 2345678899999999999
Q ss_pred hhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHH
Q 048242 249 NGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 249 ~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 328 (430)
+++...+.+++.|+++++ ..+++..+++.|+++++|+++++|.+++.+.........+ ++++|.+++||++++....+
T Consensus 227 ~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gG~~~~~~~~~ 304 (540)
T PRK05857 227 GGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANAT-VPSLRLVGYGGSRAIAADVR 304 (540)
T ss_pred chHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCc-CccceEEEEcCccCCchhHH
Confidence 999888888889998765 4568899999999999999999999999998876555555 89999999999999888876
Q ss_pred HHHhcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCC-CCC-----CCCCce
Q 048242 329 AMSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQ-PIP-----ADGKTI 402 (430)
Q Consensus 329 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~-~~~-----~~~~~~ 402 (430)
+++.+++++++.||+||++........... .....+.+++|+|++|+ +++|+|++ ++ +++ .+ +.
T Consensus 305 ~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~-~~~~~~~~~~~~~--~~ 374 (540)
T PRK05857 305 FIEATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATD-GIGPTAPGAGPSA--SF 374 (540)
T ss_pred HHHHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECcc-ccCccccccCCCC--Cc
Confidence 555779999999999999754332221110 00011347899999999 99999987 44 332 34 78
Q ss_pred eEEEEecCcccccccCCcccchHhhhCC
Q 048242 403 GEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 403 Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
|||+++|++++.|||+++++|.+.|.||
T Consensus 375 Gel~v~g~~~~~GY~~~~~~t~~~~~~g 402 (540)
T PRK05857 375 GTLWIKSPANMLGYWNNPERTAEVLIDG 402 (540)
T ss_pred ceEEEeCcchhhhhhCCccchhhhcCCC
Confidence 9999999999999999999999988664
No 54
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-48 Score=387.12 Aligned_cols=388 Identities=28% Similarity=0.439 Sum_probs=308.5
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC--C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhc
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE--S--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMT 93 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~--~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 93 (430)
.+.++.++|++.++.+|+++++.+. + +.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 8 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~ 87 (539)
T PRK07008 8 MPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGS 87 (539)
T ss_pred CCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhc
Confidence 3457999999999999999888752 2 68999999999999999999999999999999999999999999999999
Q ss_pred CCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCcc
Q 048242 94 GAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVT 173 (430)
Q Consensus 94 G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (430)
|++++|++|..+++++..+++.+++++++++.++...+.+...... ....++.+.+..... .......
T Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-----~~~~~~~ 155 (539)
T PRK07008 88 GAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP-------NVKGWVAMTDAAHLP-----AGSTPLL 155 (539)
T ss_pred CcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC-------CceEEEEEccCCccc-----cCCcccc
Confidence 9999999999999999999999999999999877665555443332 333444444321100 0112345
Q ss_pred chhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHH--HHHHhhcCCCCCCEEEeccCchhhhhh
Q 048242 174 EYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMS--LNVVLTWGMKEGAVYLWTLPIFHGNGW 251 (430)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~--~~~~~~~~~~~~~~~~~~~pl~h~~gl 251 (430)
.++++.......... ....++++++++|||||||.||+|++||.++.... ......+++..+|++++..|++|.+++
T Consensus 156 ~~~~l~~~~~~~~~~-~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~ 234 (539)
T PRK07008 156 CYETLVGAQDGDYDW-PRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW 234 (539)
T ss_pred cHHHHhcccCCCcCc-ccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH
Confidence 566665433322211 23567889999999999999999999999986432 233346778889999999999999888
Q ss_pred HHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHH
Q 048242 252 CFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAM 330 (430)
Q Consensus 252 ~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~ 330 (430)
...+.++..|+++++.+ .+++..+++.++++++|++.++|+++..+++.......+ +++||.++++|+++++.+.+++
T Consensus 235 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~ 313 (539)
T PRK07008 235 GLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLR-FSTLRRTVIGGSACPPAMIRTF 313 (539)
T ss_pred HHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHHH
Confidence 77778888999998874 579999999999999999999999999999877665556 8999999999999999999999
Q ss_pred H-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 331 S-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 331 ~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
+ .+++++++.||+||++..++.+...........+.......++|+|++++ +++|+|++ +++++.++++.|||+++|
T Consensus 314 ~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~~-~~~~~~~~~~~Gei~v~g 391 (539)
T PRK07008 314 EDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGDD-GRELPWDGKAFGDLQVRG 391 (539)
T ss_pred HHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECCC-CCccCCCCCcceEEEEeC
Confidence 7 67999999999999987665543321111111111122346899999999 99999987 888876543679999999
Q ss_pred CcccccccCCcc
Q 048242 410 NMVMKGYLKNPK 421 (430)
Q Consensus 410 ~~v~~gY~~~~~ 421 (430)
++++.|||++++
T Consensus 392 ~~~~~gy~~~~~ 403 (539)
T PRK07008 392 PWVIDRYFRGDA 403 (539)
T ss_pred CccchhhcCChh
Confidence 999999999874
No 55
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2e-48 Score=388.17 Aligned_cols=376 Identities=23% Similarity=0.310 Sum_probs=302.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE--SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..++.+++.+.++.+|+++|+++. ++.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 27 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~ 106 (546)
T PLN02330 27 KLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGV 106 (546)
T ss_pred CCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 468999999999999999999974 579999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchh
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYE 176 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
++|++|..+.+++.++++.++++++++++.....+... . ..++.+++... .....|.
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------------~-~~~i~~~~~~~----------~~~~~~~ 163 (546)
T PLN02330 107 FSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------------G-LPVIVLGEEKI----------EGAVNWK 163 (546)
T ss_pred eccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------------C-CcEEEecCCCC----------CCcccHH
Confidence 99999999999999999999999999998766554321 1 22344443211 1224455
Q ss_pred hhhhcCCCCCC--CCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC--CCCCCEEEeccCchhhhhhH
Q 048242 177 KLLETGDPEFA--WKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG--MKEGAVYLWTLPIFHGNGWC 252 (430)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~pl~h~~gl~ 252 (430)
+++........ ......++++++++|||||||.||+|.++|.++..++.......+ ....++++..+|++|.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~ 243 (546)
T PLN02330 164 ELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGIT 243 (546)
T ss_pred HHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHH
Confidence 55543322111 112345689999999999999999999999999776553322221 22356789999999999987
Q ss_pred -HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCC--ceeEEeecCCCCCHHHHHH
Q 048242 253 -FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLP--HVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 253 -~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~--~lr~v~~~G~~l~~~~~~~ 329 (430)
..+.++..|+++++.+.+++..+++.++++++|++.++|+++..++........+ ++ ++|.++++|+++++++.++
T Consensus 244 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~-~~~~~l~~i~~~g~~l~~~~~~~ 322 (546)
T PLN02330 244 GICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFD-LSKLKLQAIMTAAAPLAPELLTA 322 (546)
T ss_pred HHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccc-cchheeeeEEEcCCcCCHHHHHH
Confidence 4566778899999999999999999999999999999999999999865544444 44 5799999999999999999
Q ss_pred HH-hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEE
Q 048242 330 MS-QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVM 407 (430)
Q Consensus 330 ~~-~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v 407 (430)
++ .+ ++++++.||+||++.+...+.... ........+++|+|++++ +++|+|++++++++.| +.|||++
T Consensus 323 ~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~------~~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v 393 (546)
T PLN02330 323 FEAKFPGVQVQEAYGLTEHSCITLTHGDPE------KGHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCV 393 (546)
T ss_pred HHHHcCCCeEEecccccccccceecCCCcc------ccccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEE
Confidence 98 56 899999999999875543321110 011112346899999999 9999997779999998 8999999
Q ss_pred ecCcccccccCCcccchHhh
Q 048242 408 RGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 408 ~g~~v~~gY~~~~~~t~~~f 427 (430)
+|++++.||+++++.+.+.|
T Consensus 394 ~g~~~~~gy~~~~~~~~~~~ 413 (546)
T PLN02330 394 RSQCVMQGYYNNKEETDRTI 413 (546)
T ss_pred ecchhhhhhccCccchhhhc
Confidence 99999999999999988776
No 56
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2e-48 Score=387.58 Aligned_cols=372 Identities=21% Similarity=0.275 Sum_probs=303.5
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
..++.+++++.++.+|+++|++.. +..+||+||++++.++|+.|.+.|+++|++|+++++|++++++++|||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 458999999999999999999862 36899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH-----HHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA-----LAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
+|++++|++|.++.+++.++++.++++++++++.... .......... ....++.+++..
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--------- 164 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP-------ALRQVVVIDGDG--------- 164 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC-------cceEEEEecCCC---------
Confidence 9999999999999999999999999999999876421 1111111111 233455544321
Q ss_pred ccCCccchhhhhhcCCCC--C-----CCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEE
Q 048242 168 LSKGVTEYEKLLETGDPE--F-----AWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYL 240 (430)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 240 (430)
...+.+.+...... . .......++++++++|||||||.||+|+++|+++...+......++++.+|+++
T Consensus 165 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l 240 (538)
T TIGR03208 165 ----DDSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVIL 240 (538)
T ss_pred ----CcCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEE
Confidence 11232222211100 0 011234678999999999999999999999999999888888888899999999
Q ss_pred eccCchhhhhhH-HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 241 WTLPIFHGNGWC-FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 241 ~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
+.+|++|..++. .++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.........+ ++++|.++++|
T Consensus 241 ~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~~~~~gG 319 (538)
T TIGR03208 241 MASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAP-VPSLFTFLCAG 319 (538)
T ss_pred EeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCC-CCcceEEEEcC
Confidence 999999998876 4777888999999888899999999999999999999999999988765443344 88999999999
Q ss_pred CCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCC
Q 048242 320 SPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPAD 398 (430)
Q Consensus 320 ~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~ 398 (430)
+++++++.+++. .+++++++.||+||+++++..+.... ......++|+|++++ +++|+|++ +++++.|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~~-~~~~~~g 388 (538)
T TIGR03208 320 APIPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDAN-GAKLSQG 388 (538)
T ss_pred CCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECCC-CCCCcCC
Confidence 999999999988 67999999999999977655432110 011236789999999 99999987 8999888
Q ss_pred CCceeEEEEecCcccccccCCcccch
Q 048242 399 GKTIGEVVMRGNMVMKGYLKNPKANE 424 (430)
Q Consensus 399 ~~~~Gel~v~g~~v~~gY~~~~~~t~ 424 (430)
+.|||+++|++++.||+++++.+.
T Consensus 389 --~~Gel~v~g~~~~~gy~~~~~~~~ 412 (538)
T TIGR03208 389 --ETGRLLVRGCSNFGGYLKRPHLNS 412 (538)
T ss_pred --CCcEEEEecCcccccccCCccccc
Confidence 899999999999999999998764
No 57
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-48 Score=387.05 Aligned_cols=383 Identities=22% Similarity=0.274 Sum_probs=313.7
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
.++.++.++|.+.++++|+++|+++.+..+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~ 88 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLR 88 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCE
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccc-cHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQ-YFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
++|++|..+.+++.++++.++++.+++++. ............. ....++.++.... ...+
T Consensus 89 ~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~------------~~~~ 149 (524)
T PRK06188 89 RTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP-------SLKHVLTLGPVPD------------GVDL 149 (524)
T ss_pred EEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC-------CceEEEEeCCccc------------hhhH
Confidence 999999999999999999999999999876 3333332222111 2334444433210 0011
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
.+..... ..........++++++++|||||||.||+|.++|.++...+......+++..++++++..|++|.+++. .+
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~ 227 (524)
T PRK06188 150 LAAAAKF-GPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FL 227 (524)
T ss_pred HHhhhcc-CcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HH
Confidence 1111111 111111223456799999999999999999999999999888888888999999999999999998875 46
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcC
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKG 334 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~ 334 (430)
.+++.|+++++.+.+++..+++.++++++|+++++|+++..++........+ ++++|.+++||++++++..+.+. .++
T Consensus 228 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-l~~lr~~~~gg~~~~~~~~~~~~~~~~ 306 (524)
T PRK06188 228 PTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRD-LSSLETVYYGASPMSPVRLAEAIERFG 306 (524)
T ss_pred HHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCC-CcceeEEEEcCCCCCHHHHHHHHHHhC
Confidence 6788899999999999999999999999999999999999999887666666 89999999999999999888876 678
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
..+++.||+||++..++........ ........++|+|++++ +++|+|++ +++++.| +.|||+++|+.++.
T Consensus 307 ~~~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~~G~p~~g~-~v~i~~~~-~~~~~~g--~~Gel~v~~~~~~~ 377 (524)
T PRK06188 307 PIFAQYYGQTEAPMVITYLRKRDHD-----PDDPKRLTSCGRPTPGL-RVALLDED-GREVAQG--EVGEICVRGPLVMD 377 (524)
T ss_pred chhhheeCccccCCceeecCchhcc-----ccccccCCccccccCCc-EEEEEcCC-CCCCCCC--CeeEEEEECcchhh
Confidence 8899999999997666554332110 01123457899999999 89999988 9999988 89999999999999
Q ss_pred cccCCcccchHhhhCC
Q 048242 415 GYLKNPKANEEAFANG 430 (430)
Q Consensus 415 gY~~~~~~t~~~f~dg 430 (430)
||+++++.+...|.+|
T Consensus 378 gy~~~~~~~~~~~~~g 393 (524)
T PRK06188 378 GYWNRPEETAEAFRDG 393 (524)
T ss_pred hhcCChHHhhhhhcCC
Confidence 9999999998887654
No 58
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-48 Score=383.73 Aligned_cols=359 Identities=14% Similarity=0.185 Sum_probs=297.5
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
+++.+.|.+.++++|+++|+++.+.++||.||.++++++|+.|.+.|. +|++|+|+++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 367889999999999999999999999999999999999999999884 8999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
++|.++.+++.++++.+++++++++......+.. ....++.+++ +.+..
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~-------------~~~~~~~~~~------------------~~~~~ 128 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPD-------------EEGRVIEIDE------------------WKRMI 128 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhh-------------ccceEEEehh------------------hhhhh
Confidence 9999999999999999999999998754432221 1112222221 11111
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHh
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAA 259 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~ 259 (430)
....+.. .......+++++|+|||||||.||+|+++|.++...+......++++.+|+++...|++|..++...+.++.
T Consensus 129 ~~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~ 207 (487)
T PRK07638 129 EKYLPTY-APIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLY 207 (487)
T ss_pred hhccccc-cccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHc
Confidence 1111111 111223567899999999999999999999999888888888888999999999999999988888888899
Q ss_pred hcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-CcEE
Q 048242 260 LCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK-GFRV 337 (430)
Q Consensus 260 ~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~-~~~v 337 (430)
.|+++++.+.+++..+++.++++++|+++++|+++..+.+.... ..+.+.++++|+++++++.++++ .+ ++++
T Consensus 208 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~ 282 (487)
T PRK07638 208 VGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENRV-----IENKMKIISSGAKWEAEAKEKIKNIFPYAKL 282 (487)
T ss_pred cCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcCc-----CCceeEEEEcCCCCCHHHHHHHHHHcCCCeE
Confidence 99999999999999999999999999999999999999987321 34556677889999999999998 55 7899
Q ss_pred EeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccccc
Q 048242 338 THVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYL 417 (430)
Q Consensus 338 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~ 417 (430)
++.||+||++..+..+... .....+++|+|++++ +++|+|++ |++++.| +.|||+++|+.++.|||
T Consensus 283 ~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-g~~~~~g--~~Gel~v~~~~~~~gy~ 348 (487)
T PRK07638 283 YEFYGASELSFVTALVDEE----------SERRPNSVGRPFHNV-QVRICNEA-GEEVQKG--EIGTVYVKSPQFFMGYI 348 (487)
T ss_pred EEEecCCccCceEEecccc----------cCCCCCCCCcccCCc-EEEEECCC-CCCCCCC--CCeEEEEecccceeeec
Confidence 9999999998665543211 122447899999999 99999987 9999988 89999999999999999
Q ss_pred CCcccchHhhhCC
Q 048242 418 KNPKANEEAFANG 430 (430)
Q Consensus 418 ~~~~~t~~~f~dg 430 (430)
++++.+.+.+.||
T Consensus 349 ~~~~~~~~~~~~g 361 (487)
T PRK07638 349 IGGVLARELNADG 361 (487)
T ss_pred CCHHHHhhhccCC
Confidence 9998877655443
No 59
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8e-49 Score=395.45 Aligned_cols=378 Identities=21% Similarity=0.259 Sum_probs=293.3
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHH
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~l 88 (430)
+..++.++++++++.+|+++|+++.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 44689999999999999999998632 4899999999999999999986 9999999999999999999999
Q ss_pred HhhhcCCeeeec-cccCC--hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccc
Q 048242 89 GVPMTGAVLNCI-NFRLN--PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLE 165 (430)
Q Consensus 89 A~~~~G~~~~~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 165 (430)
||+++|++++|+ ++.++ .+++.++++.+++++++++.+....+.......... ....++.+++...
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~------ 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL-----RRPRVIAIDAIPD------ 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc-----cCceEEEeccccc------
Confidence 999999999999 57766 789999999999999999887665544432221100 1123444432110
Q ss_pred ccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC-CCCCCEEEeccC
Q 048242 166 YALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG-MKEGAVYLWTLP 244 (430)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~p 244 (430)
..... .......++++++|+|||||||.||||+++|+++.+++......++ +..++++++++|
T Consensus 180 ---------------~~~~~-~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~P 243 (612)
T PRK12476 180 ---------------SAGES-FVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLP 243 (612)
T ss_pred ---------------ccccc-ccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCC
Confidence 00000 0112345689999999999999999999999999887777666677 788899999999
Q ss_pred chhhhhhHHHHHHHhhcceEEEeCC--C--CHHHHHHHHH--hhCceEEeeccHHHHHHHcCCC----CCCCCCCCceeE
Q 048242 245 IFHGNGWCFTWSLAALCGTSVMLRQ--A--SAKAIYKAIA--EHGVTNFCAAPIVLNSIVNAPP----EDTILPLPHVVN 314 (430)
Q Consensus 245 l~h~~gl~~~~~~l~~g~~~v~~~~--~--~~~~~~~~l~--~~~vt~~~~~p~~l~~l~~~~~----~~~~~~l~~lr~ 314 (430)
++|.+|+...+.+++.|++++++.. + ++..+++.+. ++++++++.+|.++..+..... ....+ +++||
T Consensus 244 l~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~-l~~lr- 321 (612)
T PRK12476 244 LYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDID-LSNVV- 321 (612)
T ss_pred cccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcc-hhHhe-
Confidence 9999999877777777887777753 3 8899999995 5899999999999888776421 12334 88999
Q ss_pred EeecCCCCCHHHHHHHHh-c---Cc---EEEeeecCccccccccccccCCCCC--CCCh--------------hhhhhhc
Q 048242 315 VNTGGSPPPPPILLAMSQ-K---GF---RVTHVYGLSEINGPATVCAWNPNWD--SLPF--------------EAQARLN 371 (430)
Q Consensus 315 v~~~G~~l~~~~~~~~~~-~---~~---~v~~~YG~tE~~~~~~~~~~~~~~~--~~~~--------------~~~~~~~ 371 (430)
+++||+++++++.+++++ + |+ .+++.||+||+++.++......... .... .......
T Consensus 322 ~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 401 (612)
T PRK12476 322 LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAH 401 (612)
T ss_pred EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCccee
Confidence 999999999999999984 4 44 4899999999876554322110000 0000 0001123
Q ss_pred cccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 372 ARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 372 ~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+++|+|++++ +++|+|++++++++.| +.|||+++|++++.|||++++.|+++|.
T Consensus 402 ~~~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 455 (612)
T PRK12476 402 VSCGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFG 455 (612)
T ss_pred EeCCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHh
Confidence 5899999999 9999998879999998 8999999999999999999999999884
No 60
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.7e-49 Score=428.29 Aligned_cols=369 Identities=18% Similarity=0.203 Sum_probs=308.3
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..+..++.++|.+.++.+|+++|+++.++.+||+||.++++++|+.|.+.|+++|++|++++++++++++++|||+++|+
T Consensus 454 ~~~~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 454 EIPETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CCCcCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++|.++.+++.++++.+++++++++.+....+... ....+..++..
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~------------~~~~~~~~~~~------------------ 583 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV------------PDLTSLCYNAP------------------ 583 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC------------CCceeeecccc------------------
Confidence 999999999999999999999999999987654322110 00011111110
Q ss_pred hhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 176 EKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
... ..........++++++|+|||||||+||||+++|+++.+.+.+....++++.+|++++..|++|..++..++
T Consensus 584 ---~~~--~~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~ 658 (1296)
T PRK10252 584 ---LAP--QGAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFF 658 (1296)
T ss_pred ---ccc--ccCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHH
Confidence 000 000011123578999999999999999999999999999999999999999999999999999999998899
Q ss_pred HHHhhcceEEEeC---CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCC--CCCCCceeEEeecCCCCCHHHHHHH
Q 048242 256 SLAALCGTSVMLR---QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDT--ILPLPHVVNVNTGGSPPPPPILLAM 330 (430)
Q Consensus 256 ~~l~~g~~~v~~~---~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~--~~~l~~lr~v~~~G~~l~~~~~~~~ 330 (430)
.++..|+++++.+ ..++..+++.++++++|++.++|+++..++....... .. +++||.+++||+++++++.++|
T Consensus 659 ~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~-~~~lr~i~~gGe~l~~~~~~~~ 737 (1296)
T PRK10252 659 WPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQS-CASLRQVFCSGEALPADLCREW 737 (1296)
T ss_pred HHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccccccc-CCCccEEEEecCCCCHHHHHHH
Confidence 9999999999985 3689999999999999999999999999887643322 23 6899999999999999999999
Q ss_pred Hh-cCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 331 SQ-KGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 331 ~~-~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
++ +++++++.||+||++..++.+....... ........++|+|++++ +++|+|++ +++++.| +.|||+|+|
T Consensus 738 ~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~~~~g--~~Gel~i~g 809 (1296)
T PRK10252 738 QQLTGAPLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDAR-MRPVPPG--VAGDLYLTG 809 (1296)
T ss_pred HhcCCCEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECCC-CCCCCCC--CceEEEecc
Confidence 85 5899999999999987666543321100 00012346799999999 89999987 9999998 899999999
Q ss_pred CcccccccCCcccchHhhh
Q 048242 410 NMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~ 428 (430)
+++++||++++++|.++|.
T Consensus 810 ~~~~~GY~~~~~~t~~~f~ 828 (1296)
T PRK10252 810 IQLAQGYLGRPDLTASRFI 828 (1296)
T ss_pred cccchhhCCCcccchhhcc
Confidence 9999999999999999984
No 61
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.9e-48 Score=381.47 Aligned_cols=369 Identities=27% Similarity=0.373 Sum_probs=305.1
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
.++.+.|++.++.+|+++|+++.++.+||.||.+++.++|..|.+.|+++|++|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++..+.+++.++++.+++++++++.+...... .....+.++.... ..+..+
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~--------------~~~~~~~~~~~~~-------------~~~~~~- 133 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVA--------------LETPKIVIDAAAQ-------------ADSRRL- 133 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhh--------------cccceEEecCccc-------------chhHHH-
Confidence 999999999999999999999999876533211 0111222221100 001111
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHHHH
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSLA 258 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l 258 (430)
..............++++++++|||||||.||+|+++|+++...+......+++..+++++...|++|.+++.. .+..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 213 (497)
T PRK06145 134 AQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVL 213 (497)
T ss_pred hccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHH
Confidence 10101111112346789999999999999999999999999877666667778899999999999999999874 46677
Q ss_pred hhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-CcE
Q 048242 259 ALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK-GFR 336 (430)
Q Consensus 259 ~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~-~~~ 336 (430)
..|+++++.+.+++..+++.++++++|+++++|+++..++........+ ++++|.++.||++++.++.++++ .+ +.+
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~ 292 (497)
T PRK06145 214 WVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFD-LDSLAWCIGGGEKTPESRIRDFTRVFTRAR 292 (497)
T ss_pred hccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccc-cccceEEEecCCCCCHHHHHHHHHHcCCCc
Confidence 8899999988899999999999999999999999999999876655555 88999999999999999999998 55 688
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccc
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY 416 (430)
+++.||+||+++.++....+.. ....+++|+|++++ +++|+|++ ++.++.+ +.|||+++|++++.||
T Consensus 293 v~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~G~~~~~~-~~~i~~~~-~~~~~~~--~~Gel~v~g~~~~~Gy 359 (497)
T PRK06145 293 YIDAYGLTETCSGDTLMEAGRE---------IEKIGSTGRALAHV-EIRIADGA-GRWLPPN--MKGEICMRGPKVTKGY 359 (497)
T ss_pred eEEeecCcccCCcceeccCccc---------cccCCCcccCCCCc-eEEEECCC-CCCCCCC--CceEEEEECcchhhhh
Confidence 9999999999876554332211 12346899999999 99999987 8999888 8999999999999999
Q ss_pred cCCcccchHhhhCC
Q 048242 417 LKNPKANEEAFANG 430 (430)
Q Consensus 417 ~~~~~~t~~~f~dg 430 (430)
+++++.+.+.|.+|
T Consensus 360 ~~~~~~~~~~~~~~ 373 (497)
T PRK06145 360 WKDPEKTAEAFYGD 373 (497)
T ss_pred cCChHHHHHHHhCC
Confidence 99999999887553
No 62
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-48 Score=393.58 Aligned_cols=384 Identities=17% Similarity=0.206 Sum_probs=298.0
Q ss_pred HHHHHHHHHhhCCCcceEEEC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 22 PLWFLERAATVHPTRKSVVYE------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..++|+++++.+|+++|+++. .+++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|+
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 134 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGA 134 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 367788888889999999972 36899999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEecccc---------HHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQY---------FALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEY 166 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 166 (430)
+++|++|.++.+++.++++.++++++|+++.. ...+.++..... .....++.++.......
T Consensus 135 v~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vi~~~~~~~~~~---- 204 (629)
T PRK10524 135 IHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQ------HKPRHVLLVDRGLAPMA---- 204 (629)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcC------CCCCEEEEEeCCCCCcC----
Confidence 99999999999999999999999999997642 223333322221 02345555543211000
Q ss_pred cccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHH-HHHHhhcCCCCCCEEEeccCc
Q 048242 167 ALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMS-LNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~-~~~~~~~~~~~~~~~~~~~pl 245 (430)
........+.++...............++++++|+|||||||.||||+++|.++.... ......+++..+|++++..|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 284 (629)
T PRK10524 205 RVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDI 284 (629)
T ss_pred cccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCC
Confidence 0111123455544332221111123457899999999999999999999999875443 344455678899999999999
Q ss_pred hhhhhhH-HHHHHHhhcceEEEeC----CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeec
Q 048242 246 FHGNGWC-FTWSLAALCGTSVMLR----QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTG 318 (430)
Q Consensus 246 ~h~~gl~-~~~~~l~~g~~~v~~~----~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~ 318 (430)
.|..+.. .++.+++.|+++++.+ .+++..+++.|+++++|+++++|++++.+.+.... ...+ +++||.++++
T Consensus 285 ~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~~lr~i~~~ 363 (629)
T PRK10524 285 GWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHD-LSSLRALFLA 363 (629)
T ss_pred CeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccC-hhheeEEEEe
Confidence 9988865 5777888999998885 35789999999999999999999999998875432 2334 8899999999
Q ss_pred CCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
|+++++++.++++ .+++++++.||+||+++.+....... .....+.+++|+|++++ +++|+|+++|++++.
T Consensus 364 Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-------~~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~ 435 (629)
T PRK10524 364 GEPLDEPTASWISEALGVPVIDNYWQTETGWPILAIARGV-------EDRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGP 435 (629)
T ss_pred CCCCCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCc-------ccCcCCCCCcccCcCCc-eEEEEeCCCCCCCCC
Confidence 9999999999998 57999999999999974433222110 00112357899999999 999999945999998
Q ss_pred CCCceeEEEEecC---cccccccCCcccchHh
Q 048242 398 DGKTIGEVVMRGN---MVMKGYLKNPKANEEA 426 (430)
Q Consensus 398 ~~~~~Gel~v~g~---~v~~gY~~~~~~t~~~ 426 (430)
| +.|||+++|| +++.|||++++.+.+.
T Consensus 436 g--~~Gel~i~gp~~~~~~~~~~~~~~~~~~~ 465 (629)
T PRK10524 436 N--EKGVLVIEGPLPPGCMQTVWGDDDRFVKT 465 (629)
T ss_pred C--CcEEEEEcCCCChhhcCCccCChHHHHHh
Confidence 8 8999999998 6889999999877654
No 63
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-48 Score=386.77 Aligned_cols=392 Identities=21% Similarity=0.222 Sum_probs=306.7
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
.....++.++|.+.++.+|+++|++..++++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 6 ~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 85 (540)
T PRK06164 6 APRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGA 85 (540)
T ss_pred ccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCc
Confidence 44455899999999999999999998889999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHH-HHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA-LAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTE 174 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
+++|++|..+.+++.++++.+++++++++++... .+......... ........++.+++...... ......
T Consensus 86 ~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~ 157 (540)
T PRK06164 86 TVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPP--DALPPLRAIAVVDDAADATP------APAPGA 157 (540)
T ss_pred EEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccc--cccCCcceEEEeccCcccCC------CCCccc
Confidence 9999999999999999999999999999876421 11111111000 00012234444442110000 000001
Q ss_pred hhhhhhcCCC---CCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhh
Q 048242 175 YEKLLETGDP---EFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGW 251 (430)
Q Consensus 175 ~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl 251 (430)
+.+....... .........++++++++|||||||.||+|+++|.++...+......+++..++++++.+|++|.+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~ 237 (540)
T PRK06164 158 RVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGF 237 (540)
T ss_pred ccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHH
Confidence 1111111100 0001123356889999999999999999999999999988888888899999999999999999999
Q ss_pred HHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecC-CCCCHHHHHHH
Q 048242 252 CFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGG-SPPPPPILLAM 330 (430)
Q Consensus 252 ~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G-~~l~~~~~~~~ 330 (430)
..++.++..|+++++.+.+++..+++.|+++++|+++++|++++.+.+.. ....+ ++++|.+..+| .+...++.+++
T Consensus 238 ~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 315 (540)
T PRK06164 238 STLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERAD-FPSARLFGFASFAPALGELAALA 315 (540)
T ss_pred HHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCC-CcceeeeeeccCCcchHHHHHHH
Confidence 98888999999999998899999999999999999999999999998873 23334 88999887765 55566777777
Q ss_pred HhcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCcc-ccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 331 SQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKC-MCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 331 ~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~-~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
.+.++++++.||+||+++.++.+..... ......+.|.+. +++ +++|+|++++++++.| +.|||+++|
T Consensus 316 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 384 (540)
T PRK06164 316 RARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIRA 384 (540)
T ss_pred hhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEec
Confidence 7669999999999999876665432211 112235678876 788 8999998889999988 899999999
Q ss_pred CcccccccCCcccchHhhh
Q 048242 410 NMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~ 428 (430)
++++.|||+++++|.+.|.
T Consensus 385 ~~~~~gY~~~~~~t~~~~~ 403 (540)
T PRK06164 385 PSLMRGYLDNPDATARALT 403 (540)
T ss_pred ccccccccCCchhhhhccc
Confidence 9999999999999998884
No 64
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=9e-49 Score=423.15 Aligned_cols=394 Identities=19% Similarity=0.229 Sum_probs=314.7
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEEC-CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYE-SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~-~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
....++.+.+++.++++|+++|+++. ++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 34567999999999999999999974 5899999999999999999987 489999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|++|..+.+++.++++++++++++++++..+.+.+.... ........++..++..... .....+
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--------~~~~~~ 757 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFD-----LELPENVKVIYLEDLKAKI--------SKVDKL 757 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCc-----hhcccCceEEEeehhcccc--------chhHHH
Confidence 999999999999999999999999999987655543321000 0001223444444321100 001112
Q ss_pred hhhhhcCC-CC----CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhh
Q 048242 176 EKLLETGD-PE----FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 176 ~~~~~~~~-~~----~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~g 250 (430)
.+...... +. ........++|+++++|||||||.||+|.++|+++...+......++...+|++++.+|++|.+|
T Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g 837 (1146)
T PRK08633 758 TALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFG 837 (1146)
T ss_pred HHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHh
Confidence 22111110 10 00012456789999999999999999999999999998888888888999999999999999999
Q ss_pred hHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHH
Q 048242 251 WCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 251 l~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 328 (430)
+.. .+.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.......+ ++++|.+++||+++++++.+
T Consensus 838 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~~~~ 916 (1146)
T PRK08633 838 LTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLM-FASLRLVVAGAEKLKPEVAD 916 (1146)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCccc-CCCeeeEEEcCCcCCHHHHH
Confidence 885 778888999988876 478999999999999999999999999998876555555 89999999999999999999
Q ss_pred HHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEE
Q 048242 329 AMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVM 407 (430)
Q Consensus 329 ~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v 407 (430)
+++ .+|+++++.||+||+++.++.+.......... .....+.+++|+|+|++ +++|+|++++++++.| +.|||++
T Consensus 917 ~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~-~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v 992 (1146)
T PRK08633 917 AFEEKFGIRILEGYGATETSPVASVNLPDVLAADFK-RQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILI 992 (1146)
T ss_pred HHHHHhCCCeecccccccCcceEEEecCcccccccc-cccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEE
Confidence 998 67999999999999987766543221100000 11123457899999999 9999998879999998 8999999
Q ss_pred ecCcccccccCCcccchHhhhC
Q 048242 408 RGNMVMKGYLKNPKANEEAFAN 429 (430)
Q Consensus 408 ~g~~v~~gY~~~~~~t~~~f~d 429 (430)
+|++++.||+++++.|.+.|.|
T Consensus 993 ~g~~~~~gY~~~~~~t~~~~~~ 1014 (1146)
T PRK08633 993 GGPQVMKGYLGDPEKTAEVIKD 1014 (1146)
T ss_pred cCCCccccccCCccchHHHhhc
Confidence 9999999999999999988865
No 65
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1e-48 Score=428.34 Aligned_cols=390 Identities=18% Similarity=0.168 Sum_probs=301.1
Q ss_pred CCHHHHHHHHHhhCCCcceEEE---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHh
Q 048242 20 LTPLWFLERAATVHPTRKSVVY---------ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGV 90 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~---------~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~ 90 (430)
.++.++|+++++.+|+++|+++ .++++||+||.++++++|+.|.+.|+++|++|+|+++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 5799999999999999999986 3478999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH---HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccc
Q 048242 91 PMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF---ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYA 167 (430)
Q Consensus 91 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 167 (430)
+++|++++|++|.++.+++.++++.+++++++++.... ..+......... .......+...++....
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------- 385 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELE---LRTEIPALALQDDGSLV------- 385 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccc---cccccceEEeccccccc-------
Confidence 99999999999999999999999999999999876421 111111110000 00011111111110000
Q ss_pred ccCCccc--hhhhhhcCC--CCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEecc
Q 048242 168 LSKGVTE--YEKLLETGD--PEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTL 243 (430)
Q Consensus 168 ~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 243 (430)
.+... ..+.+.... ..........++++++|+|||||||.||||+++|+++.+.+.+....+++..+|+++...
T Consensus 386 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~ 463 (1389)
T TIGR03443 386 --GGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLS 463 (1389)
T ss_pred --ccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 00000 000010000 000111234578999999999999999999999999999998888889999999999999
Q ss_pred CchhhhhhHHHHHHHhhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCC
Q 048242 244 PIFHGNGWCFTWSLAALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGS 320 (430)
Q Consensus 244 pl~h~~gl~~~~~~l~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~ 320 (430)
|++|..++..++.+++.|+++++.+. .++..+++.|+++++|+++++|++++.+..... .. +++||.+++||+
T Consensus 464 ~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~---~~-~~~lr~~~~gGe 539 (1389)
T TIGR03443 464 GIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT---TP-IPSLHHAFFVGD 539 (1389)
T ss_pred CceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc---cc-CCCccEEEEecc
Confidence 99999999889999999999988854 368899999999999999999999999875432 23 889999999999
Q ss_pred CCCHHHHHHHHhc--CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCC-CCCCCCC
Q 048242 321 PPPPPILLAMSQK--GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTK-TNQPIPA 397 (430)
Q Consensus 321 ~l~~~~~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~-~~~~~~~ 397 (430)
++++...+++++. ++++++.||+||++..++.....................++|+|++++ +++|+|++ .+++++.
T Consensus 540 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~ 618 (1389)
T TIGR03443 540 ILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGV 618 (1389)
T ss_pred cCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCC
Confidence 9999999998854 799999999999987666543221100000000112346799999999 99999975 3578888
Q ss_pred CCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 398 DGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 398 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
| ++|||+|+|+++++||||+|++|+++|.
T Consensus 619 G--~~GEL~i~G~~v~~GY~~~p~~t~~~f~ 647 (1389)
T TIGR03443 619 G--EVGEIYVRAGGLAEGYLGLPELNAEKFV 647 (1389)
T ss_pred C--CceEEEecccccchhcCCChhHhhhhcc
Confidence 8 8999999999999999999999999983
No 66
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=1.1e-47 Score=380.67 Aligned_cols=379 Identities=22% Similarity=0.327 Sum_probs=305.0
Q ss_pred CCHHHHHHHHHhhCCCcceEEECC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcC
Q 048242 20 LTPLWFLERAATVHPTRKSVVYES-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTG 94 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G 94 (430)
.++.++|++.++++|+++|+++.+ +.+||+||.++++++|+.|.++|+++||+|+++++|+.++++++|||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 579999999999999999999864 789999999999999999999999999999999999999999999999999
Q ss_pred CeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccc
Q 048242 95 AVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTE 174 (430)
Q Consensus 95 ~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
+++++++|..+.+++.++++.++++.++++.+....+.++..... .....++..+.... ...+...
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~--------~~~~~~~ 152 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDA------TPLRHICLTRVALP--------ADDGVSS 152 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhcc------ccCcEEEEecCCCc--------ccccccC
Confidence 999999999999999999999999999999877665555433221 02334444433211 1122344
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhH-H
Q 048242 175 YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWC-F 253 (430)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~-~ 253 (430)
+.+................++++++++|||||||.||+|+++|.++............+..++++++.+|++|..+.. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 232 (517)
T PRK08008 153 FTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTA 232 (517)
T ss_pred HHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHH
Confidence 544433322211122344678999999999999999999999999976544333344577899999999999987666 4
Q ss_pred HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-h
Q 048242 254 TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-Q 332 (430)
Q Consensus 254 ~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~ 332 (430)
++.++..|+++++.+++++..+++.++++++|++.++|.+++.+.......... ..+++.++++ .+++++....+. .
T Consensus 233 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~~-~~~~~~~~~~~~~~ 310 (517)
T PRK08008 233 AMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDR-QHCLREVMFY-LNLSDQEKDAFEER 310 (517)
T ss_pred HHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccc-cccceeeEEe-cCCCHHHHHHHHHH
Confidence 666777899999998899999999999999999999999999998765544333 5678887775 478888888887 6
Q ss_pred cCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec---
Q 048242 333 KGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG--- 409 (430)
Q Consensus 333 ~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g--- 409 (430)
+++++++.||+||+++.++.....+ .....++|+|++++ +++|+|++ +++++.| +.|||+++|
T Consensus 311 ~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 376 (517)
T PRK08008 311 FGVRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDDH-NRPLPAG--EIGEICIKGVPG 376 (517)
T ss_pred hCCeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECCC-CCCCCCC--CcceEEEeCCCC
Confidence 6999999999999976555433211 12347899999999 99999987 9999988 899999998
Q ss_pred CcccccccCCcccchHhhh
Q 048242 410 NMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 410 ~~v~~gY~~~~~~t~~~f~ 428 (430)
++++.|||++++.+.+.|.
T Consensus 377 ~~~~~gy~~~~~~~~~~~~ 395 (517)
T PRK08008 377 KTIFKEYYLDPKATAKVLE 395 (517)
T ss_pred cchhhhHhCChHHHhhccc
Confidence 6899999999999988873
No 67
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-47 Score=382.37 Aligned_cols=388 Identities=27% Similarity=0.408 Sum_probs=309.3
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEE--CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVY--ES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~--~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
..++++.++|++.++.+|+++++.. .+ +++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~ 86 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMG 86 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHh
Confidence 3467999999999999999999985 23 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
+|++++|++|.++.+++.++++.++++.++++.+....+.+...... ....++...+...... ......
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~----~~~~~~ 155 (542)
T PRK06018 87 IGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP-------SVERYVVLTDAAHMPQ----TTLKNA 155 (542)
T ss_pred cCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC-------CccEEEEecccccccc----cCcccc
Confidence 99999999999999999999999999999999887776665544333 3344554433211000 011123
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHH-H-HHHHHHhhcCCCCCCEEEeccCchhhhh
Q 048242 173 TEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAY-L-MSLNVVLTWGMKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~-~-~~~~~~~~~~~~~~~~~~~~~pl~h~~g 250 (430)
..+.+++........ .....++++++|+|||||||.||+|.+||++.+ . ........+++..+|+++...|++|.++
T Consensus 156 ~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~ 234 (542)
T PRK06018 156 VAYEEWIAEADGDFA-WKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANS 234 (542)
T ss_pred ccHHHHhccCCcccC-cccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhh
Confidence 355555544332221 123466789999999999999999999999742 2 2233445667889999999999999999
Q ss_pred hHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHH
Q 048242 251 WCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 251 l~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 329 (430)
+...+.++..|+++++.. .+++..+++.++++++|+++++|++++.+.+.......+ +++||.++.+|+++++++.++
T Consensus 235 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~~G~~l~~~~~~~ 313 (542)
T PRK06018 235 WGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLK-LPHLKMVVCGGSAMPRSMIKA 313 (542)
T ss_pred hHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCC-cccceEEEEcCCCCCHHHHHH
Confidence 887778888899888764 578899999999999999999999999998876555555 889999999999999999999
Q ss_pred HHhcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 330 MSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 330 ~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
|+++++++++.||+||++.+++.+...+.......+.......++|+|.+++ +++|+|++ ++.++.+++..|||+++|
T Consensus 314 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~~-~~~~~~~~~~~Gel~i~g 391 (542)
T PRK06018 314 FEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDDA-GKELPWDGKTFGRLKVRG 391 (542)
T ss_pred HHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECCC-CCCCCCCCCceeEEEEec
Confidence 9888999999999999987766554332222111122222346799999999 89999987 888886544689999999
Q ss_pred CcccccccCC
Q 048242 410 NMVMKGYLKN 419 (430)
Q Consensus 410 ~~v~~gY~~~ 419 (430)
++++.|||++
T Consensus 392 ~~~~~gy~~~ 401 (542)
T PRK06018 392 PAVAAAYYRV 401 (542)
T ss_pred CCcchhhhcC
Confidence 9999999984
No 68
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.2e-48 Score=385.72 Aligned_cols=387 Identities=19% Similarity=0.227 Sum_probs=300.9
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
..++.++|.++++.+|+++|+++.++.+||.||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~ 102 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIV 102 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 35899999999999999999999889999999999999999999985 99999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEec--CCCCC-------------CC
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIG--DETCD-------------RA 162 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~-------------~~ 162 (430)
+|++|..+.+++.++++.++++++++++............. ....++... +.... ..
T Consensus 103 v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (562)
T PRK12492 103 VNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--------GIEYLIEAKMGDLLPAAKGWLVNTVVDKVKK 174 (562)
T ss_pred eccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--------CceEEEeechhhccccccchhcccccccccc
Confidence 99999999999999999999999999876544433322110 111111110 00000 00
Q ss_pred cccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC---------C
Q 048242 163 PLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG---------M 233 (430)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~---------~ 233 (430)
............|.+.+...............+++++|+|||||||.||+|+++|+++...+......+. +
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 254 (562)
T PRK12492 175 MVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLM 254 (562)
T ss_pred cccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccc
Confidence 0000001122345555443322211123456789999999999999999999999999777665544332 2
Q ss_pred CC-CCEEEeccCchhhhhhHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCC
Q 048242 234 KE-GAVYLWTLPIFHGNGWCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLP 310 (430)
Q Consensus 234 ~~-~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~ 310 (430)
.. ++++++.+|++|.+++.. .+..+..|+..++.. .+++..+++.++++++|+++.+|+++..+.........+ ++
T Consensus 255 ~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~ 333 (562)
T PRK12492 255 KEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLD-FS 333 (562)
T ss_pred cCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCccccc-cc
Confidence 22 457789999999999875 444456677666653 568999999999999999999999999999876655555 88
Q ss_pred ceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeC
Q 048242 311 HVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDT 389 (430)
Q Consensus 311 ~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~ 389 (430)
++|.+++||+++++++.++++ .+++++++.||+||+++.++.+.... ..+.+++|+|++++ +++|+|+
T Consensus 334 ~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~ 402 (562)
T PRK12492 334 ALKLTNSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD 402 (562)
T ss_pred ceeEEEeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC
Confidence 999999999999999999998 56999999999999987665443211 12347899999999 9999998
Q ss_pred CCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 390 KTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 390 ~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+ +++++.| +.|||+++|++++.|||++++.+.+.|.
T Consensus 403 ~-~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~ 438 (562)
T PRK12492 403 D-GNELPLG--ERGELCIKGPQVMKGYWQQPEATAEALD 438 (562)
T ss_pred C-CCCCCCC--CceEEEEeCCccccccccCchhhhhccc
Confidence 7 8999988 8999999999999999999999988873
No 69
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.3e-47 Score=379.09 Aligned_cols=369 Identities=22% Similarity=0.300 Sum_probs=306.2
Q ss_pred CCHHHHHHHHHhhCCCcceEEE-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVY-ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
.++.+++.+.+ .+|++.|+.+ .++.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v 81 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFL 81 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEE
Confidence 47889998888 9999999988 567999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|+++..+..++..+++.++++++++++.....+....... ....++.++.... ..+.+.
T Consensus 82 ~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-------------~~~~~~ 140 (504)
T PRK07514 82 PLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAA--------GAPHVETLDADGT-------------GSLLEA 140 (504)
T ss_pred ECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhcc--------CCceEEEecCCCc-------------ccHHHh
Confidence 9999999999999999999999999987665554432221 2222444433211 111111
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSL 257 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~ 257 (430)
....... .......++++++++|||||||.||+|.++|.++...+......+++..+|++++.+|++|..++.. .+.+
T Consensus 141 ~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 219 (504)
T PRK07514 141 AAAAPDD-FETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVA 219 (504)
T ss_pred hhhcCcc-cCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHH
Confidence 1111111 1123456789999999999999999999999999988888888888999999999999999999874 6677
Q ss_pred HhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcE
Q 048242 258 AALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFR 336 (430)
Q Consensus 258 l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~ 336 (430)
+..|+++++.+.+++..+++.+ .++|++.++|.++..++......... ++++|.++.||+++++++.+.++ .++.+
T Consensus 220 l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 296 (504)
T PRK07514 220 LLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREA-AAHMRLFISGSAPLLAETHREFQERTGHA 296 (504)
T ss_pred HhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCccc-ccceeeEEecCCCCCHHHHHHHHHHhCCc
Confidence 8889999999889999999999 47999999999999999876555555 88999999999999999999998 56899
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccc
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY 416 (430)
+++.||+||++..+.... . ......++|+|++++ +++|+|++++++++.| +.|||+++|++++.||
T Consensus 297 ~~~~YG~tE~~~~~~~~~-~----------~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy 362 (504)
T PRK07514 297 ILERYGMTETNMNTSNPY-D----------GERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGY 362 (504)
T ss_pred ceeecccccccccccCCc-c----------ccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCccccc
Confidence 999999999875443211 1 112347899999999 9999997779999988 8999999999999999
Q ss_pred cCCcccchHhhh
Q 048242 417 LKNPKANEEAFA 428 (430)
Q Consensus 417 ~~~~~~t~~~f~ 428 (430)
+++++.+.+.|.
T Consensus 363 ~~~~~~~~~~~~ 374 (504)
T PRK07514 363 WRMPEKTAEEFR 374 (504)
T ss_pred cCCchhhhhhcc
Confidence 999999998884
No 70
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.7e-49 Score=359.31 Aligned_cols=397 Identities=19% Similarity=0.209 Sum_probs=328.5
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECC-----------------------eeeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYES-----------------------KHYTWQQTYQRCRRLASALSQLSIGPGT 71 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~-----------------------~~~Ty~el~~~~~~la~~L~~~gv~~g~ 71 (430)
....-.|+.+++++.++++.++.++-+++ .++||.|+.+++..+|.+|.+.|+++++
T Consensus 36 ~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e 115 (678)
T KOG1180|consen 36 PNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKE 115 (678)
T ss_pred CCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 34456789999999999999999986532 6899999999999999999999999877
Q ss_pred e-EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCe
Q 048242 72 A-VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPV 150 (430)
Q Consensus 72 ~-V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (430)
. |+|+++.+.+|..+++||++.+..+|-+...+..+.+.|-|++++++.+||+.+.+..+....+..+ ..+.
T Consensus 116 ~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~-------~vk~ 188 (678)
T KOG1180|consen 116 TKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK-------TVKH 188 (678)
T ss_pred CeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC-------ceeE
Confidence 6 9999999999999999999999999999999999999999999999999999999888777777666 7888
Q ss_pred EEEecCCCCCCC--ccccc--ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHH
Q 048242 151 LIVIGDETCDRA--PLEYA--LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLN 226 (430)
Q Consensus 151 ~i~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~ 226 (430)
+|.++..+.... ..+.. ....+++|+++++.+.+...++.+..++|+|+|+|||||||.||||+++|.|+++.+..
T Consensus 189 II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G 268 (678)
T KOG1180|consen 189 IIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTG 268 (678)
T ss_pred EEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhh
Confidence 999986443322 22211 23457889999998887765555668899999999999999999999999999999988
Q ss_pred HHhhc-CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCC-----C---HHHHHHHHHhhCceEEeeccHHHHHH
Q 048242 227 VVLTW-GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQA-----S---AKAIYKAIAEHGVTNFCAAPIVLNSI 297 (430)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~-----~---~~~~~~~l~~~~vt~~~~~p~~l~~l 297 (430)
..... .+...|+++..+||.|++.+..-+.+++.|+.+=..+.. + ...--..+...|||.+.++|..++++
T Consensus 269 ~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drV 348 (678)
T KOG1180|consen 269 VGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRV 348 (678)
T ss_pred hcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHH
Confidence 87776 578999999999999999999999999998876544321 1 11222355678999999999999998
Q ss_pred HcCCCC--------------------------CCCC---------------CCCceeEEeecCCCCCHHHHHHHH-hcCc
Q 048242 298 VNAPPE--------------------------DTIL---------------PLPHVVNVNTGGSPPPPPILLAMS-QKGF 335 (430)
Q Consensus 298 ~~~~~~--------------------------~~~~---------------~l~~lr~v~~~G~~l~~~~~~~~~-~~~~ 335 (430)
.+.... .... .-..||++++||+||+++..+.+. =+.+
T Consensus 349 rKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~ 428 (678)
T KOG1180|consen 349 RKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCC 428 (678)
T ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccc
Confidence 753100 0000 035999999999999999999998 5588
Q ss_pred EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccc
Q 048242 336 RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKG 415 (430)
Q Consensus 336 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~g 415 (430)
++.++||.||+++..++..+.+ -..+.+|.|++.+ +++++|-+.+...+.+.-..|||+++|+++..|
T Consensus 429 Pv~qGYGLTEtca~~tv~e~~d-----------~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~g 496 (678)
T KOG1180|consen 429 PVLQGYGLTETCAAATVLEPED-----------FSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMG 496 (678)
T ss_pred cccccccccchhcccEecChhh-----------cccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChh
Confidence 9999999999988887765432 2457999999999 999999876777665522379999999999999
Q ss_pred ccCCcccchHhh-h-CC
Q 048242 416 YLKNPKANEEAF-A-NG 430 (430)
Q Consensus 416 Y~~~~~~t~~~f-~-dg 430 (430)
||+|++.|++.| . ||
T Consensus 497 Y~kn~ekT~e~ft~~~G 513 (678)
T KOG1180|consen 497 YYKNEEKTKEDFTVEDG 513 (678)
T ss_pred hhCChhhhhhhceecCC
Confidence 999999999999 3 55
No 71
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-47 Score=383.40 Aligned_cols=392 Identities=26% Similarity=0.334 Sum_probs=308.3
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECC---eeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYES---KHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~---~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
+.+.++.++|++.++.+|+++|+++.+ +++||+||.+++.++|+.|.+ .|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 7 DVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 445789999999999999999998753 799999999999999999996 7999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
+|++++|++|..+.+++.++++.++++++|+++.....+.+...... ....++.++.................
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~ 159 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP-------CVRAVVFIGPSDADSAAAHMPEGIKV 159 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc-------cccEEEEecCcccccchhcccccccc
Confidence 99999999999999999999999999999999877666655544433 33445555432211110011111234
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHH--HhhcCCCCCCEEEeccCchhhhh
Q 048242 173 TEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNV--VLTWGMKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~--~~~~~~~~~~~~~~~~pl~h~~g 250 (430)
.+|.+++........ .....++++++++|||||||.||+|+++|+++....... ...+.+..++++++.+|++|.++
T Consensus 160 ~~~~~l~~~~~~~~~-~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 238 (576)
T PRK05620 160 YSYEALLDGRSTVYD-WPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLS 238 (576)
T ss_pred ccHHHHhhcCCCcCC-CCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhh
Confidence 457776654322211 133567899999999999999999999999986554432 33567888999999999999999
Q ss_pred hHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHH
Q 048242 251 WCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 251 l~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 329 (430)
+...+.++..|+++++.. .+++..+++.++++++|+++++|.++..++........+ ..+||.++++|+++++++.++
T Consensus 239 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~ 317 (576)
T PRK05620 239 WGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPE-RMSLQEIYVGGSAVPPILIKA 317 (576)
T ss_pred hHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcc-cCceeEEEEcCCCCCHHHHHH
Confidence 988888888999988875 579999999999999999999999999888654333333 568999999999999999999
Q ss_pred HH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEe
Q 048242 330 MS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMR 408 (430)
Q Consensus 330 ~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~ 408 (430)
++ .+++++++.||+||++..++.....+... .........++|++.+++ +++|+|+ ++.++...++.|||+++
T Consensus 318 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v~ 391 (576)
T PRK05620 318 WEERYGVDVVHVWGMTETSPVGTVARPPSGVS---GEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQVR 391 (576)
T ss_pred HHHHhCCceeeeccccccccceeeeccCCccc---cccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEEE
Confidence 98 66999999999999987665543221100 000001124789999999 8999986 66665322268999999
Q ss_pred cCcccccccCCcccc
Q 048242 409 GNMVMKGYLKNPKAN 423 (430)
Q Consensus 409 g~~v~~gY~~~~~~t 423 (430)
|++++.|||++++.+
T Consensus 392 g~~~~~gY~~~~~~t 406 (576)
T PRK05620 392 GNWVTASYYHSPTEE 406 (576)
T ss_pred cCcccccccCCcccc
Confidence 999999999999988
No 72
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-47 Score=381.49 Aligned_cols=390 Identities=23% Similarity=0.324 Sum_probs=309.7
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYE--SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
.+....++.++|++.++++|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||++
T Consensus 13 ~~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~ 92 (558)
T PRK12583 13 KPLLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATAR 92 (558)
T ss_pred CCcccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHh
Confidence 3445568999999999999999999884 47899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccH-----HHHHHHHHHhhcc------CCCCCCCCeEEEecCCCCCC
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF-----ALAEEALKIMEGK------SEGLFKPPVLIVIGDETCDR 161 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~ 161 (430)
+|+++++++|..+.+++.++++.+++++++++.... ..+.......... ....+....++..+...
T Consensus 93 ~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 169 (558)
T PRK12583 93 IGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP--- 169 (558)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC---
Confidence 999999999999999999999999999999976432 2222211111000 00111222333333221
Q ss_pred CcccccccCCccchhhhhhcCCCC-----CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCC
Q 048242 162 APLEYALSKGVTEYEKLLETGDPE-----FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEG 236 (430)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~ 236 (430)
..+...|++........ ........++++++++|||||||.||+|.++|.++.+++......+++..+
T Consensus 170 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 242 (558)
T PRK12583 170 -------PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEH 242 (558)
T ss_pred -------CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCC
Confidence 11223444443322211 011123457889999999999999999999999999888888888889999
Q ss_pred CEEEeccCchhhhhhHH-HHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeE
Q 048242 237 AVYLWTLPIFHGNGWCF-TWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVN 314 (430)
Q Consensus 237 ~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~ 314 (430)
|++++..|++|.+|+.. .+.++..|+++++. ..+++..+++.++++++|+++++|+++..++........+ +++||.
T Consensus 243 d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~-~~~lr~ 321 (558)
T PRK12583 243 DRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFD-LSSLRT 321 (558)
T ss_pred CeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCC-chhheE
Confidence 99999999999999875 55566677777755 3578999999999999999999999999888776555555 899999
Q ss_pred EeecCCCCCHHHHHHHH-hcC-cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCC
Q 048242 315 VNTGGSPPPPPILLAMS-QKG-FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTN 392 (430)
Q Consensus 315 v~~~G~~l~~~~~~~~~-~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~ 392 (430)
+++||+++++++.+++. .++ ..+++.||+||+++++..+...+. ......++|+|.+++ .++|+|++ +
T Consensus 322 i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~~-~ 391 (558)
T PRK12583 322 GIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDPD-G 391 (558)
T ss_pred EEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECCC-C
Confidence 99999999999999997 665 579999999999877665432211 112347899999999 89999998 9
Q ss_pred CCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 393 QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 393 ~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
++++.| +.|||+++|+.++.||+++++.+...|
T Consensus 392 ~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~ 424 (558)
T PRK12583 392 ATVPRG--EIGELCTRGYSVMKGYWNNPEATAESI 424 (558)
T ss_pred CCCCCC--CeeEEEEEeCccchhhcCChHHHHhhc
Confidence 999998 899999999999999999999988776
No 73
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-47 Score=381.35 Aligned_cols=388 Identities=19% Similarity=0.224 Sum_probs=305.5
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
....++.++|.+.++++|+++|+++.+..+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~ 99 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYV 99 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeE
Confidence 33468999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCC--Cc-----------
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDR--AP----------- 163 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~----------- 163 (430)
++|++|..+.+++.++++.++++++++++.....+....... ....++......... ..
T Consensus 100 ~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (557)
T PRK07059 100 VVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT--------AVKHVVVASMGDLLGFKGHIVNFVVRRVKK 171 (557)
T ss_pred EeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc--------CCceeEEecccccccccccccccccccccc
Confidence 999999999999999999999999999876655444432211 122222221110000 00
Q ss_pred -ccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc----CC---CC
Q 048242 164 -LEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW----GM---KE 235 (430)
Q Consensus 164 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~----~~---~~ 235 (430)
.......+...+.+.+..............++++++|+|||||||.||+|+++|.++..++....... .. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 251 (557)
T PRK07059 172 MVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPD 251 (557)
T ss_pred cccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCC
Confidence 00001122334555544433222222345678999999999999999999999999977654433221 11 12
Q ss_pred CCEEEeccCchhhhhhH-HHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCcee
Q 048242 236 GAVYLWTLPIFHGNGWC-FTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVV 313 (430)
Q Consensus 236 ~~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr 313 (430)
...+++.+|++|.+++. ..+.++..|++.++.+ ..++..+++.++++++|++..+|.++..+.........+ ++++|
T Consensus 252 ~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~-~~~l~ 330 (557)
T PRK07059 252 QLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLD-FSKLI 330 (557)
T ss_pred CcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCC-chhhe
Confidence 45678899999998876 4566777888877775 358899999999999999999999999999877655555 88999
Q ss_pred EEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCC
Q 048242 314 NVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTN 392 (430)
Q Consensus 314 ~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~ 392 (430)
.++.||+++++.+.++|+ .+++++++.||+||++..++.+.... ....+++|+|++++ +++|+|++ +
T Consensus 331 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~-~ 398 (557)
T PRK07059 331 VANGGGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA----------TEFSGTIGLPLPST-EVSIRDDD-G 398 (557)
T ss_pred EEEeccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC----------CCcCCcccCccCCc-EEEEECCC-C
Confidence 999999999999999998 56999999999999987765443211 12347899999999 99999987 8
Q ss_pred CCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 393 QPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 393 ~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
++++.| +.|||+++|++++.|||++++.+.+.|
T Consensus 399 ~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~ 431 (557)
T PRK07059 399 NDLPLG--EPGEICIRGPQVMAGYWNRPDETAKVM 431 (557)
T ss_pred CCCCCC--CceEEEEeCCccchhhhcCHHHHhhhc
Confidence 999988 899999999999999999999998877
No 74
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.7e-47 Score=380.45 Aligned_cols=374 Identities=21% Similarity=0.293 Sum_probs=301.5
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
|...++.++|+++++ |+++|+++.++.+||+||.+++.++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 22 ~~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v 99 (536)
T PRK10946 22 WQDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVA 99 (536)
T ss_pred ecCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeE
Confidence 346689999988887 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccH-----HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCC
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYF-----ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKG 171 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (430)
++++.+.....++.++++.++++.++++.... ..........+ ....++..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~-------------~ 159 (536)
T PRK10946 100 PVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS-------SLRVVLLLNDD-------------G 159 (536)
T ss_pred EecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC-------CceEEEEecCC-------------C
Confidence 88777777788899999999999999986431 11111111111 22333332221 1
Q ss_pred ccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhh
Q 048242 172 VTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGW 251 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl 251 (430)
...+.+.+....... ......++++++++|||||||.||+|+++|+++..++......+++..+|++++.+|++|.+++
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~ 238 (536)
T PRK10946 160 EHSLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPM 238 (536)
T ss_pred CccHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccc
Confidence 122333333222111 1234567899999999999999999999999999998888888899999999999999999887
Q ss_pred HH--HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCC--CCCCCCCCCceeEEeecCCCCCHHHH
Q 048242 252 CF--TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAP--PEDTILPLPHVVNVNTGGSPPPPPIL 327 (430)
Q Consensus 252 ~~--~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~--~~~~~~~l~~lr~v~~~G~~l~~~~~ 327 (430)
.. .+.++..|+++++.+.+++..++..++++++|++.++|.++..++... ...... +++||.+++||+++++++.
T Consensus 239 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~-~~~l~~v~~gg~~l~~~~~ 317 (536)
T PRK10946 239 SSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQ-LASLKLLQVGGARLSETLA 317 (536)
T ss_pred hhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCcccc-ccceeEEEECCCCCCHHHH
Confidence 63 677788899999888899999999999999999999999999998763 222233 7899999999999999999
Q ss_pred HHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCcc-ccccceEEeeCCCCCCCCCCCCceeEE
Q 048242 328 LAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKC-MCLEGLDVLDTKTNQPIPADGKTIGEV 405 (430)
Q Consensus 328 ~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~-~~~~~~~v~d~~~~~~~~~~~~~~Gel 405 (430)
+++. .+++++++.||+||+........ . ......+++|+|+ +++ .++|+|++ +++++.| +.|||
T Consensus 318 ~~~~~~~g~~~~~~YG~tE~~~~~~~~~-~---------~~~~~~~~~G~p~~~~~-~v~i~d~~-~~~~~~g--~~Gel 383 (536)
T PRK10946 318 RRIPAELGCQLQQVFGMAEGLVNYTRLD-D---------SDERIFTTQGRPMSPDD-EVWVADAD-GNPLPQG--EVGRL 383 (536)
T ss_pred HHHHHhcCCeEEEeecccccceeeecCC-C---------ccccccccCCcccCCCc-eEEEECCC-CCCCCCC--CccEE
Confidence 9997 67999999999999653332211 1 0112347899999 778 89999987 9999998 99999
Q ss_pred EEecCcccccccCCcccchHhhh
Q 048242 406 VMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 406 ~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+++|++++.|||++++.|.+.|.
T Consensus 384 ~v~g~~~~~GY~~~~~~t~~~~~ 406 (536)
T PRK10946 384 MTRGPYTFRGYYKSPQHNASAFD 406 (536)
T ss_pred EEecCccchhhcCCcccchhhcc
Confidence 99999999999999999998883
No 75
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-48 Score=395.43 Aligned_cols=348 Identities=16% Similarity=0.152 Sum_probs=286.6
Q ss_pred CHHHHHHHHHhh--CCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 21 TPLWFLERAATV--HPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 21 t~~~~l~~~~~~--~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
++.++|.++++. +|+++|++.. ..+||+||.++++++|+.|.++|+++|++|+|+++|++++++++|||+++|++++
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~v 83 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAF 83 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEE
Confidence 788999888886 7999999874 5899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.++++++|++.+....+.. ..++. ..+.
T Consensus 84 pi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~---------------~~~~~---------------------~~~~ 127 (705)
T PRK06060 84 LANPELHRDDHALAARNTEPALVVTSDALRDRFQP---------------SRVAE---------------------AAEL 127 (705)
T ss_pred ecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc---------------cccch---------------------hhhh
Confidence 99999999999999999999999998754332211 00000 0000
Q ss_pred hhcCC-CCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHH-hhcCCCCCCEEEeccCchhhhhhH-HHH
Q 048242 179 LETGD-PEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVV-LTWGMKEGAVYLWTLPIFHGNGWC-FTW 255 (430)
Q Consensus 179 ~~~~~-~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~pl~h~~gl~-~~~ 255 (430)
+.... ..+....+..++++++++|||||||.||+|+++|+++.+.+.+.. ..+++..++++++..|++|.+++. .++
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 207 (705)
T PRK06060 128 MSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVW 207 (705)
T ss_pred hhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHH
Confidence 00000 001111234568999999999999999999999999988776654 457788999999999999998875 567
Q ss_pred HHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc
Q 048242 256 SLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK 333 (430)
Q Consensus 256 ~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~ 333 (430)
.++..|+++++.+ .+++..+...+.++++|+++++|+++..+.+.... .. +++||.+++||+++++++.+++. .+
T Consensus 208 ~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~--~~-~~slr~i~~gGe~l~~~~~~~~~~~~ 284 (705)
T PRK06060 208 FPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP--DS-FRSLRCVVSAGEALELGLAERLMEFF 284 (705)
T ss_pred HHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc--cc-ccceeEEEEecCcCCHHHHHHHHHHc
Confidence 7888999999886 47888899999999999999999999999875432 23 78999999999999999999998 45
Q ss_pred -CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcc
Q 048242 334 -GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMV 412 (430)
Q Consensus 334 -~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v 412 (430)
++++++.||+||++..+..+... ....+++|+|++++ +++|+|++ +++++.| +.|||+|+|+++
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~iG~p~~~~-~v~i~d~~-g~~~~~g--~~GEl~i~g~~v 349 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRVD-----------EWRLGTLGRVLPPY-EIRVVAPD-GTTAGPG--VEGDLWVRGPAI 349 (705)
T ss_pred CCCceEeeeeccccCceEEeccCC-----------CCCcCcccccCCCc-EEEEECCC-CCCCCCC--CceEEEEccchh
Confidence 58999999999997554432211 11347899999999 99999998 9999988 899999999999
Q ss_pred cccccCCcccc
Q 048242 413 MKGYLKNPKAN 423 (430)
Q Consensus 413 ~~gY~~~~~~t 423 (430)
+.|||++++.+
T Consensus 350 ~~GY~~~~~~~ 360 (705)
T PRK06060 350 AKGYWNRPDSP 360 (705)
T ss_pred hhhhhCCCccc
Confidence 99999999865
No 76
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-48 Score=382.67 Aligned_cols=384 Identities=18% Similarity=0.228 Sum_probs=296.0
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..++.++|++.++++|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 15 ~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 94 (534)
T PRK05852 15 GPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLV 94 (534)
T ss_pred cccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcE
Confidence 4579999999999999999999754 57999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCcc--c
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVT--E 174 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--~ 174 (430)
++|++|.++..++.++++.++++++|++........... .. .....+.+...... ..+.. .
T Consensus 95 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~--------~~~~~~~~ 157 (534)
T PRK05852 95 VVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPT--TR-------WWPLTVNVGGDSGP--------SGGTLSVH 157 (534)
T ss_pred EeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhcccc--cc-------ccceeeeecccccc--------cccccccc
Confidence 999999999999999999999999999864332111000 00 00111111111000 00000 0
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-
Q 048242 175 YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF- 253 (430)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~- 253 (430)
+..... ............++.++++|||||||.||+|+++|+++...+......+++..+|++++..|++|.+++..
T Consensus 158 ~~~~~~--~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 235 (534)
T PRK05852 158 LDAATE--PTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAA 235 (534)
T ss_pred cccccC--CCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHH
Confidence 001000 00000111223568899999999999999999999999988888888888999999999999999999885
Q ss_pred HHHHHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC--CCCCCCceeEEeecCCCCCHHHHHH
Q 048242 254 TWSLAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED--TILPLPHVVNVNTGGSPPPPPILLA 329 (430)
Q Consensus 254 ~~~~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~ 329 (430)
++.++..|+++++.. .+++..+++.++++++|+++++|.+++.+.+..... ..+ .+++|.++++|+++++.+.+.
T Consensus 236 ~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~~G~~~~~~~~~~ 314 (534)
T PRK05852 236 LLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRK-PAALRFIRSCSAPLTAETAQA 314 (534)
T ss_pred HHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccccccc-CCCeeEEEECCCCCCHHHHHH
Confidence 555666777766643 478999999999999999999999999998865432 233 789999999999999999999
Q ss_pred HH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEe
Q 048242 330 MS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMR 408 (430)
Q Consensus 330 ~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~ 408 (430)
++ .++.++++.||+||++..++......... ........+..|+ .+++ +++|+|++ +++++.+ +.|||+++
T Consensus 315 ~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~---~~~~~~~~g~~g~-~~g~-~~~i~d~~-g~~~~~g--~~Gel~v~ 386 (534)
T PRK05852 315 LQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQ---TENPVVSTGLVGR-STGA-QIRIVGSD-GLPLPAG--AVGEVWLR 386 (534)
T ss_pred HHHHhCCChhhccCccccchhhhcCCcccccc---ccCcccccccCCC-CCCC-eEEEECCC-CCCCCCC--CceEEEEe
Confidence 98 67999999999999987665432210000 0000112234444 6899 89999998 8999998 89999999
Q ss_pred cCcccccccCCcccchHhhhCC
Q 048242 409 GNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 409 g~~v~~gY~~~~~~t~~~f~dg 430 (430)
|++++.|||++++.|.+.|.||
T Consensus 387 g~~v~~gY~~~~~~t~~~~~~g 408 (534)
T PRK05852 387 GTTVVRGYLGDPTITAANFTDG 408 (534)
T ss_pred cCcccchhcCCcccchhhhcCC
Confidence 9999999999999999988664
No 77
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.8e-48 Score=453.91 Aligned_cols=369 Identities=17% Similarity=0.199 Sum_probs=310.9
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|+++++++|+++|+++.+.++||+||.++++++|+.|.+.|+++|++|+|++++++++++++||++++|++++
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~v 3798 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGYL 3798 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEEe
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
||+|.++.+++.++++.+++++++++................. ....++..++..
T Consensus 3799 pld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-------------------- 3853 (4334)
T PRK05691 3799 PLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-----NRPRLLVWEEVQ-------------------- 3853 (4334)
T ss_pred CCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-----cccceeeecccc--------------------
Confidence 9999999999999999999999999987655443332221100 111222222110
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
..............+++.++|+|||||||+||||+++|+++.+.+.+....++++.+|+++...++.|..+++.++.++
T Consensus 3854 -~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l 3932 (4334)
T PRK05691 3854 -AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAP 3932 (4334)
T ss_pred -cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHH
Confidence 0001111111235678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhc--
Q 048242 259 ALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQK-- 333 (430)
Q Consensus 259 ~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~-- 333 (430)
+.|+++++++. .++..+++.++++++|++..+|++++.++..... . +++||.+++|||++++++.++|.+.
T Consensus 3933 ~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~---~-~~~lr~~~~gGe~l~~~~~~~~~~~~~ 4008 (4334)
T PRK05691 3933 LFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ---A-LDGLRWMLPTGEAMPPELARQWLQRYP 4008 (4334)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc---c-CCCceEEEecCCcCCHHHHHHHHHhCC
Confidence 99999999863 5789999999999999999999999998864322 2 7899999999999999999999743
Q ss_pred CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccc
Q 048242 334 GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVM 413 (430)
Q Consensus 334 ~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~ 413 (430)
+++++|.||+||++..+++...... .......++|+|++++ ++.|+|.+ ++++|.| .+|||+|+|++++
T Consensus 4009 ~~~l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~~-~~~~p~g--~~GEL~i~G~~v~ 4077 (4334)
T PRK05691 4009 QIGLVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDEA-LELVPLG--AVGELCVAGTGVG 4077 (4334)
T ss_pred CCeEEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECCC-CCCCCCC--CceEEEEeccccc
Confidence 8899999999999887765543211 0111235799999999 99999987 9999999 8999999999999
Q ss_pred ccccCCcccchHhhh
Q 048242 414 KGYLKNPKANEEAFA 428 (430)
Q Consensus 414 ~gY~~~~~~t~~~f~ 428 (430)
+||+|+|++|+++|.
T Consensus 4078 ~GY~~~~~~t~~~f~ 4092 (4334)
T PRK05691 4078 RGYVGDPLRTALAFV 4092 (4334)
T ss_pred ccccCCcccchhhcc
Confidence 999999999999993
No 78
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.5e-48 Score=450.62 Aligned_cols=374 Identities=20% Similarity=0.233 Sum_probs=313.0
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHH
Q 048242 10 LPKNPANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFG 89 (430)
Q Consensus 10 ~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA 89 (430)
++.........++.++|++.++++|+++|+++.++++||+||.++++++|+.|.++|+++|++|+|++++++++++++||
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 581 (3956)
T PRK12467 502 WNAPATEYAPDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLA 581 (3956)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 34444445667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccccc
Q 048242 90 VPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALS 169 (430)
Q Consensus 90 ~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (430)
|+++|++++|++|.++.+++.++++.+++++++++.+....+.. . ....++.++....
T Consensus 582 il~aG~~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~-----~-------~~~~~~~~~~~~~---------- 639 (3956)
T PRK12467 582 VLKAGGAYVPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLPV-----P-------AGLRSLCLDEPAD---------- 639 (3956)
T ss_pred HHHhCcEEeccCCCChHHHHHHHHHhcCCCEEEechhhhhhccc-----c-------cCccEEEeccccc----------
Confidence 99999999999999999999999999999999998743221110 0 1122232222110
Q ss_pred CCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhh
Q 048242 170 KGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGN 249 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~ 249 (430)
.... ...........++++++|+|||||||+||||+++|+++.+.+.+....+++..+|+++...|++|..
T Consensus 640 --------~~~~-~~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~ 710 (3956)
T PRK12467 640 --------LLCG-YSGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDL 710 (3956)
T ss_pred --------cccc-cCCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhH
Confidence 0000 0111111245678999999999999999999999999999999998899999999999999999999
Q ss_pred hhHHHHHHHhhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHH
Q 048242 250 GWCFTWSLAALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPI 326 (430)
Q Consensus 250 gl~~~~~~l~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 326 (430)
++..++.++..|+++++.+. +++..+++.|+++++|+++++|++++.+....... . ..++|.+++||+++++++
T Consensus 711 ~~~~~~~~L~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~--~-~~~lr~i~~gGe~l~~~~ 787 (3956)
T PRK12467 711 GVTELFGALASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVA--L-PRPQRALVCGGEALQVDL 787 (3956)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhccc--c-CCcccEEEEEeecCCHHH
Confidence 99999999999999999863 68999999999999999999999999998764332 2 567899999999999999
Q ss_pred HHHHHhc--CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeE
Q 048242 327 LLAMSQK--GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGE 404 (430)
Q Consensus 327 ~~~~~~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Ge 404 (430)
.++|++. +++++|.||+||++..++.+...... ......++|+|++++ +++|+|++ +++++.| ++||
T Consensus 788 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GE 856 (3956)
T PRK12467 788 LARVRALGPGARLINHYGPTETTVGVSTYELSDEE-------RDFGNVPIGQPLANL-GLYILDHY-LNPVPVG--VVGE 856 (3956)
T ss_pred HHHHHHhCCCCEEEeCcCCChhhhheeeEeccccc-------ccCCCCcccCCcCCC-EEEEECCC-CCCCCCC--CceE
Confidence 9999854 68999999999998777665432110 001136799999999 99999987 9999998 8999
Q ss_pred EEEecCcccccccCCcccchHhhh
Q 048242 405 VVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 405 l~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
|+|+|+++++||+++|++|+++|.
T Consensus 857 L~i~G~~v~~GYl~~p~~T~~~F~ 880 (3956)
T PRK12467 857 LYIGGAGLARGYHRRPALTAERFV 880 (3956)
T ss_pred EEecccccchhhcCCccccHhhCc
Confidence 999999999999999999999983
No 79
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=4.8e-47 Score=375.29 Aligned_cols=374 Identities=18% Similarity=0.228 Sum_probs=305.3
Q ss_pred HHHHHHHH-HhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec
Q 048242 22 PLWFLERA-ATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI 100 (430)
Q Consensus 22 ~~~~l~~~-~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 100 (430)
-.+++++. ++.+|+++|+++.+..+||.||.++++++|+.|.+.|+++|++|+++++|+.+++++++||+++|++++|+
T Consensus 6 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 6 AEDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 34667665 67799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhh
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLE 180 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
+|..+.+++.++++.+++++++++.+....+.+.....+ ....++..+... .....+.+...
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-----------~~~~~~~~~~~ 147 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP-------HLEHRVVVGRPE-----------AGEVQLAELLA 147 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC-------CccEEEEeCCCC-----------cccccHHHHhh
Confidence 999999999999999999999999877665555433332 334455444321 11123444333
Q ss_pred cCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHH-HHhhcCCCCCCEEEeccCchhhhhhHH-HHHHH
Q 048242 181 TGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLN-VVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSLA 258 (430)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~-~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l 258 (430)
...... ......++++++++|||||||.||+|.++|+++...+.. ....++++.+|+++..+|++|.+++.. ++.++
T Consensus 148 ~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l 226 (508)
T TIGR02262 148 TESEQF-KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPM 226 (508)
T ss_pred cCCCcc-CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHH
Confidence 222211 112345789999999999999999999999999877654 445668889999999999999999864 55667
Q ss_pred hhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcE
Q 048242 259 ALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFR 336 (430)
Q Consensus 259 ~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~ 336 (430)
..|+++++.+ .+++..+++.|+++++|+++++|.++..++......... ..++|.++++|+++++++.+.|+ .++++
T Consensus 227 ~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~-~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 305 (508)
T TIGR02262 227 SVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAED-QVRLRLCTSAGEALPAEVGQRWQARFGVD 305 (508)
T ss_pred HcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccc-cccceeEEEcCCCCCHHHHHHHHHHhCCc
Confidence 7899888875 468999999999999999999999999888765443344 67999999999999999999998 57999
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccc
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY 416 (430)
+++.||+||+++.+..+... ....+++|+|++++ +++|+|.+ +++++.+ +.|||+++|++++.||
T Consensus 306 v~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~v~i~d~~-~~~~~~g--~~Gel~i~~~~~~~gY 370 (508)
T TIGR02262 306 IVDGIGSTEMLHIFLSNLPG-----------DVRYGTSGKPVPGY-RLRLVGDG-GQDVAAG--EPGELLISGPSSATMY 370 (508)
T ss_pred hhhCccccccCceeecCCcc-----------CCCCCCcCCCCCCc-EEEEECCC-CCCCCCC--CeeEEEEecCcccccc
Confidence 99999999998755543211 11246899999999 89999955 9999998 8999999999999999
Q ss_pred cCCcccchHhhhCC
Q 048242 417 LKNPKANEEAFANG 430 (430)
Q Consensus 417 ~~~~~~t~~~f~dg 430 (430)
+++++++.+.|.+|
T Consensus 371 ~~~~~~~~~~~~~~ 384 (508)
T TIGR02262 371 WNNRAKTRDTFQGE 384 (508)
T ss_pred CCCHHHhHhhhhcC
Confidence 99999998877543
No 80
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4.6e-48 Score=456.15 Aligned_cols=363 Identities=17% Similarity=0.185 Sum_probs=308.5
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|++.++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.+++++++++......+.. . ....++.++.... +
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~----~--------~~~~~~~~~~~~~---------------~--- 639 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL----A--------AGVQVLDLDRPAA---------------W--- 639 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc----c--------cCceEEEecCcch---------------h---
Confidence 99999999999999999999999998754332110 0 1122333332110 0
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
+.. ...........++++++|+|||||||+||||+++|+++.+.+.+....++++.+++++...|++|..++..++.++
T Consensus 640 ~~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L 718 (5163)
T PRK12316 640 LEG-YSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPL 718 (5163)
T ss_pred hcc-CCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHH
Confidence 000 0111111235678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEEeC---CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-
Q 048242 259 ALCGTSVMLR---QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK- 333 (430)
Q Consensus 259 ~~g~~~v~~~---~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~- 333 (430)
+.|+++++.+ .+++..+++.++++++|+++++|++++.+.+.... .. +++||.+++||+++++++.++|. .+
T Consensus 719 ~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~--~~-~~~l~~~~~gGe~l~~~~~~~~~~~~~ 795 (5163)
T PRK12316 719 MSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDV--AS-CTSLRRIVCSGEALPADAQEQVFAKLP 795 (5163)
T ss_pred hCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcccc--cc-CCCccEEEEeeccCCHHHHHHHHHhCC
Confidence 9999999984 47899999999999999999999999999875432 23 78999999999999999999996 44
Q ss_pred CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccc
Q 048242 334 GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVM 413 (430)
Q Consensus 334 ~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~ 413 (430)
+++++|.||+||++..++...... ......++|+|++|+ +++|+|++ +++++.| ++|||+|+|++++
T Consensus 796 ~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~~-~~~~p~G--~~GEl~i~G~~v~ 862 (5163)
T PRK12316 796 QAGLYNLYGPTEAAIDVTHWTCVE---------EGGDSVPIGRPIANL-ACYILDAN-LEPVPVG--VLGELYLAGRGLA 862 (5163)
T ss_pred CCeEEeCcCcChheeeeeEEeccc---------ccCCCCCCccccCCC-EEEEECCC-CCCCCCC--CceEEEecccccC
Confidence 789999999999986555433211 112346899999999 99999988 9999998 8999999999999
Q ss_pred ccccCCcccchHhhh
Q 048242 414 KGYLKNPKANEEAFA 428 (430)
Q Consensus 414 ~gY~~~~~~t~~~f~ 428 (430)
.||+++|++|+++|.
T Consensus 863 ~GYl~~~~~t~~~f~ 877 (5163)
T PRK12316 863 RGYHGRPGLTAERFV 877 (5163)
T ss_pred hhhCCChhhhhhhCC
Confidence 999999999999983
No 81
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.6e-47 Score=384.03 Aligned_cols=366 Identities=18% Similarity=0.231 Sum_probs=285.7
Q ss_pred hCCCcceEEECC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCCh
Q 048242 32 VHPTRKSVVYES-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNP 106 (430)
Q Consensus 32 ~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~ 106 (430)
.+|+++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|++|.++.
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 579999999853 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCceEEEeccccH---------HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 107 LNVAIILGHAEAALVFVDQQYF---------ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 107 ~~l~~~l~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+++.++++.++++++|+++... ..+.++....+ ....++.++...... ..........|++
T Consensus 176 ~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~---~~~~~~~~~~~~~ 245 (655)
T PRK03584 176 QGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP-------SLEHVVVVPYLGPAA---AAAALPGALLWED 245 (655)
T ss_pred HHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEecCCCcc---cccccCCcccHHH
Confidence 9999999999999999987532 22222222221 334455554321100 0011223455666
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHH-HHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAY-LMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWS 256 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~-~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~ 256 (430)
++...............+++++|+|||||||.||||+++|.+++ +.+......+++..+|++++..++.|+.+. ..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~ 324 (655)
T PRK03584 246 FLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN-WLVS 324 (655)
T ss_pred HhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH-HHHH
Confidence 66522222222234567899999999999999999999999875 445556667788999999999998887543 4567
Q ss_pred HHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC--CCCCCCCCceeEEeecCCCCCHHHHHHH
Q 048242 257 LAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP--EDTILPLPHVVNVNTGGSPPPPPILLAM 330 (430)
Q Consensus 257 ~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~--~~~~~~l~~lr~v~~~G~~l~~~~~~~~ 330 (430)
+++.|+++++.+. +++..+++.++++++|++.++|++++.+.+... ....+ +++||.++++|+++++++.+++
T Consensus 325 ~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~-l~sLr~i~~~Ge~l~~~~~~~~ 403 (655)
T PRK03584 325 GLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHD-LSALRTIGSTGSPLPPEGFDWV 403 (655)
T ss_pred HHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCC-hhheEEEEEecCCCCHHHHHHH
Confidence 8889999999852 578999999999999999999999999876432 22344 8999999999999999999999
Q ss_pred H-hc--CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEE
Q 048242 331 S-QK--GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVM 407 (430)
Q Consensus 331 ~-~~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v 407 (430)
. .+ ++.+.+.||+||+++.+...... .....+++|.|.+|+ +++|+|++ |+++ .+ +.|||+|
T Consensus 404 ~~~~~~~~~~~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~~~ivd~~-g~~~-~g--~~GeL~v 468 (655)
T PRK03584 404 YEHVKADVWLASISGGTDICSCFVGGNPL----------LPVYRGEIQCRGLGM-AVEAWDED-GRPV-VG--EVGELVC 468 (655)
T ss_pred HHHhCCCceEEeccChHhhhcccccCCCC----------CCcCCCccCCCcCCc-eeEEECCC-CCCC-CC--CceEEEE
Confidence 8 55 57899999999986543322111 012347899999999 99999988 8888 56 8999999
Q ss_pred ecC--cccccccCCcccch
Q 048242 408 RGN--MVMKGYLKNPKANE 424 (430)
Q Consensus 408 ~g~--~v~~gY~~~~~~t~ 424 (430)
+|+ +++.|||++++.++
T Consensus 469 ~gp~p~~~~gy~~~~~~~~ 487 (655)
T PRK03584 469 TKPFPSMPLGFWNDPDGSR 487 (655)
T ss_pred ccCCCCCcceeeCCCccch
Confidence 996 89999999998654
No 82
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.7e-46 Score=373.95 Aligned_cols=390 Identities=21% Similarity=0.278 Sum_probs=301.9
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
.+.++.++|++.++.+|+++|+++.++.+||.||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 35689999999999999999999989999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCc---ccccccCCccc
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAP---LEYALSKGVTE 174 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~ 174 (430)
+|++|..+.+++.++++.++++++++++.. .......+..... ....++.++........ ...........
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLA-ALLPMALKFLEKG-----LLDRLIVCEDDNWGKVGTPQAPIPADPRIVT 172 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCch-hhhHHHHHhhhcc-----cceEEEEecccccccccccccccCCCccccc
Confidence 999999999999999999999999997632 1111111111100 12233333321110000 00001122344
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc------CCCCCCEEEeccCchhh
Q 048242 175 YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW------GMKEGAVYLWTLPIFHG 248 (430)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~------~~~~~~~~~~~~pl~h~ 248 (430)
+.+++........ .....++++++++|||||||.||+|+++|.++....... ..+ .....+++++..|++|.
T Consensus 173 ~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~ 250 (541)
T TIGR03205 173 YADFVKGAAAPAE-WPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHI 250 (541)
T ss_pred HHHHHhcCCCCCC-CCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHH
Confidence 5555543222211 123567899999999999999999999999987654321 221 22345789999999999
Q ss_pred hhhHH-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHH
Q 048242 249 NGWCF-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPIL 327 (430)
Q Consensus 249 ~gl~~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 327 (430)
+++.. ++.++..|+++++...+++..+++.|.++++|++.++|+++..+.........+ ++++|.++.||+++++++.
T Consensus 251 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~i~~gg~~~~~~~~ 329 (541)
T TIGR03205 251 YALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRD-LSSLATIGSGGAPLPVEVA 329 (541)
T ss_pred HHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccC-ccccceEEEccccCCHHHH
Confidence 88775 666777899888888889999999999999999999999999998765433444 7899999999999999999
Q ss_pred HHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEee-CCCCCCCCCCCCceeEE
Q 048242 328 LAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLD-TKTNQPIPADGKTIGEV 405 (430)
Q Consensus 328 ~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d-~~~~~~~~~~~~~~Gel 405 (430)
++++ .++.++++.||+||++..++.+.... ....+++|.+++++ .++|.+ .+.+++++.+ +.|||
T Consensus 330 ~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel 396 (541)
T TIGR03205 330 NFFERKTGLKLKSGWGMTETCSPGTGHPPEG----------PDKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGEL 396 (541)
T ss_pred HHHHHHhCCCeecccccccCCcccccCCCCC----------CCCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEE
Confidence 9987 56999999999999987666543211 11346899999999 898865 2348889888 89999
Q ss_pred EEecCcccccccCCcccchHhhhC
Q 048242 406 VMRGNMVMKGYLKNPKANEEAFAN 429 (430)
Q Consensus 406 ~v~g~~v~~gY~~~~~~t~~~f~d 429 (430)
+++|++++.|||++++.+.+.|.+
T Consensus 397 ~v~~~~~~~gy~~~~~~~~~~~~~ 420 (541)
T TIGR03205 397 RIRGPNVTRGYWNRPEESAEAFVG 420 (541)
T ss_pred EEecCCccccccCChhhhHhhhcc
Confidence 999999999999999999888854
No 83
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-46 Score=376.90 Aligned_cols=390 Identities=22% Similarity=0.291 Sum_probs=300.4
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
...++.++|.+.++.+|+++|+++.++.+||+||.+++.++|+.|.+.|+++||+|+++++|+.++++++|||+++|+++
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIV 101 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccc------------
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLE------------ 165 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------ 165 (430)
+|++|..+.+++.++++.++++++++++.....+....... ....++.............
T Consensus 102 vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (563)
T PRK06710 102 VQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT--------KIEHVIVTRIADFLPFPKNLLYPFVQKKQSN 173 (563)
T ss_pred eccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh--------ccceeEEeccccccccccccccchhhccccc
Confidence 99999999999999999999999999886554433222111 1112221110000000000
Q ss_pred cc----ccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh-hcCCC-CCCEE
Q 048242 166 YA----LSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL-TWGMK-EGAVY 239 (430)
Q Consensus 166 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~-~~~~~-~~~~~ 239 (430)
.. .......|....... ...........+++++++|||||||.||+|.++|+++..+...... .+... .++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~ 252 (563)
T PRK06710 174 LVVKVSESETIHLWNSVEKEV-NTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVV 252 (563)
T ss_pred ccccccccchhhhhhhhhhcc-ccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceE
Confidence 00 000001111111111 1110111123578999999999999999999999998755443322 23333 45688
Q ss_pred EeccCchhhhhhHH-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeec
Q 048242 240 LWTLPIFHGNGWCF-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTG 318 (430)
Q Consensus 240 ~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~ 318 (430)
++.+|++|.+++.. ++.++..|+++++.+.+++..+++.|+++++|++.++|+++..++........+ +++||.+++|
T Consensus 253 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~lr~v~~g 331 (563)
T PRK06710 253 LGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYD-ISSIRACISG 331 (563)
T ss_pred EEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCC-hhhhhheeeC
Confidence 99999999998864 556778899999988899999999999999999999999999999876554445 7899999999
Q ss_pred CCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCC
Q 048242 319 GSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPA 397 (430)
Q Consensus 319 G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~ 397 (430)
|+++++++.++++ .+++++++.||+||++..+..+... .....+++|++.+++ .++|+|++++++++.
T Consensus 332 g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~ 400 (563)
T PRK06710 332 SAPLPVEVQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPP 400 (563)
T ss_pred CCcCCHHHHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCC
Confidence 9999999999998 5689999999999998655432211 012246899999999 899999777999999
Q ss_pred CCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 398 DGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 398 ~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
| +.|||+++|+.++.||+++++.+...|.||
T Consensus 401 g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g 431 (563)
T PRK06710 401 G--EIGEIVVKGPQIMKGYWNKPEETAAVLQDG 431 (563)
T ss_pred C--CceEEEEecCccchhhhCChHHHhhhcccC
Confidence 8 899999999999999999999998877554
No 84
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=1.4e-46 Score=376.21 Aligned_cols=386 Identities=19% Similarity=0.234 Sum_probs=303.3
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALS-QLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
..++.++|.+.++.+|+++|+++.++++||+||.+++.++|+.|. +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 468999999999999999999999999999999999999999997 6899999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCC---CC------------C
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETC---DR------------A 162 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~------------~ 162 (430)
+|++|.++.+++.++++.++++++++++.....+....... ....++.++.... .. .
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--------PVKQVITTGLGDMLGFPKAALVNFVVKYVKK 175 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--------CccEEEEechhhhcccccchhhhhhhhhhhc
Confidence 99999999999999999999999999887655544432211 1222332210000 00 0
Q ss_pred cccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcC----CCC-CC
Q 048242 163 PLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWG----MKE-GA 237 (430)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~----~~~-~~ 237 (430)
........+...+.+.+..............++++++++|||||||.||+|+++|.++...+.+....+. +.. ++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08751 176 LVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCE 255 (560)
T ss_pred cccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCc
Confidence 0000001122334444433222111223356789999999999999999999999999887776555443 233 45
Q ss_pred EEEeccCchhhhhhHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEE
Q 048242 238 VYLWTLPIFHGNGWCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNV 315 (430)
Q Consensus 238 ~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v 315 (430)
++++..|++|.+++.. .+.++..|++.++.. .+++..+++.+.++++|++..+|.++..+.+.......+ +++||.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-l~~lr~v 334 (560)
T PRK08751 256 VVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQID-FSSLKMT 334 (560)
T ss_pred eEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcc-hhhheee
Confidence 7788899999999864 455666777776664 578999999999999999999999999999876555555 8899999
Q ss_pred eecCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCC
Q 048242 316 NTGGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQP 394 (430)
Q Consensus 316 ~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~ 394 (430)
++||+++++.+.+.|+ .+++.+++.||+||+++.++.+... .....+++|+|++++ +++|+|++ +++
T Consensus 335 ~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~~~~~~-~v~i~d~~-~~~ 402 (560)
T PRK08751 335 LGGGMAVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLT----------LKEYNGSIGLPIPST-DACIKDDA-GTV 402 (560)
T ss_pred eeCCCCCCHHHHHHHHHHhCCeEEEeeccccCCCceeccccc----------ccccCCCcCccCCCc-eEEEECCC-CCC
Confidence 9999999999999998 4589999999999998765543321 012347899999999 89999976 899
Q ss_pred CCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 395 IPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 395 ~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
++.+ +.|||+++|++++.||+++++.+.+.|
T Consensus 403 ~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~ 433 (560)
T PRK08751 403 LAIG--EIGELCIKGPQVMKGYWKRPEETAKVM 433 (560)
T ss_pred CCCC--CceEEEEecCccchhhcCChhhhhhcc
Confidence 9988 899999999999999999999998877
No 85
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-46 Score=376.22 Aligned_cols=395 Identities=22% Similarity=0.202 Sum_probs=306.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|++.++.+|+++|+.+.++.+||.||.+++.++|+.|.++|+++|++|+++++|+++++++++||+++|++++
T Consensus 32 ~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 111 (567)
T PRK06178 32 ERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVHV 111 (567)
T ss_pred cccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCC--cc--------cccc
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRA--PL--------EYAL 168 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~--------~~~~ 168 (430)
|++|..+.+++.++++.++++++++++...+.+.+..... ....++.......... .. ....
T Consensus 112 ~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (567)
T PRK06178 112 PVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--------SLRHVIVTSLADVLPAEPTLPLPDSLRAPRLA 183 (567)
T ss_pred ecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--------CcceEEEecccccccccccccccccccccccc
Confidence 9999999999999999999999999988766655443211 1223332221110000 00 0000
Q ss_pred cCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh-hcCCCCCCEEEeccCchh
Q 048242 169 SKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL-TWGMKEGAVYLWTLPIFH 247 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~pl~h 247 (430)
..+...+.+...... .........++++++|+|||||||.||+|++||.++......... ......+|++++.+|++|
T Consensus 184 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 262 (567)
T PRK06178 184 AAGAIDLLPALRACT-APVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFW 262 (567)
T ss_pred ccccccHHHHhhccc-cccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHH
Confidence 111112211111111 111123356789999999999999999999999998776554433 356788999999999999
Q ss_pred hhhhH-HHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeec--CCCCCH
Q 048242 248 GNGWC-FTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTG--GSPPPP 324 (430)
Q Consensus 248 ~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~--G~~l~~ 324 (430)
.+|+. .++.++..|+++++.+++++..++..++++++|+++.+|..+..+.........+ +++++.+..+ ++++++
T Consensus 263 ~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~-l~~l~~~~~~~~~~~~~~ 341 (567)
T PRK06178 263 IAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYD-LSSLRQVRVVSFVKKLNP 341 (567)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCC-cchheeeeeccccccCCH
Confidence 99986 5777788999999999899999999999999999999999999988765544445 7888886543 589999
Q ss_pred HHHHHHH-hcCcEEEe-eecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCce
Q 048242 325 PILLAMS-QKGFRVTH-VYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTI 402 (430)
Q Consensus 325 ~~~~~~~-~~~~~v~~-~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~ 402 (430)
++.+.++ .++..++. .||+||+++.++....... . ........+++|+|++|+ +++|+|++++++++.| +.
T Consensus 342 ~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~-~---~~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~ 414 (567)
T PRK06178 342 DYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQD-D---DFDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AE 414 (567)
T ss_pred HHHHHHHHHhCCcccccccccccccccceecccccc-C---ccccccCCcccccccCCc-EEEEEcCCCCCcCCCC--Cc
Confidence 9999998 45777664 7999999766554321110 0 000012346799999999 9999997779999988 89
Q ss_pred eEEEEecCcccccccCCcccchHhhhCC
Q 048242 403 GEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 403 Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
|||+++|++++.|||++++.+.+.|.||
T Consensus 415 Gel~v~g~~v~~gY~~~~~~~~~~~~dg 442 (567)
T PRK06178 415 GEIVVRTPSLLKGYWNKPEATAEALRDG 442 (567)
T ss_pred eEEEEECCcccccccCChhhhhhcccCC
Confidence 9999999999999999999998887654
No 86
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=8.7e-47 Score=375.31 Aligned_cols=363 Identities=22% Similarity=0.256 Sum_probs=286.9
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
.++.++|.+.+ .|+++|+++.+..+||+||.++++++|..|.++|+ ++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v 80 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLV 80 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEE
Confidence 46888887754 69999999999999999999999999999999999 8999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.+++++++++++....+.+.. . ....++.+++. .+.+.
T Consensus 81 ~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~--------~~~~~i~~~~~----------------~~~~~ 134 (540)
T PRK13388 81 GLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--L--------PGVRVLDVDTP----------------AYAEL 134 (540)
T ss_pred EecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--c--------cCceEEEccch----------------hhhhh
Confidence 9999999999999999999999999887654433221 1 11223333221 12222
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH-HH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW-SL 257 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~-~~ 257 (430)
+...... .......++++++++|||||||.||+|.++|.++...+......+++..+|+++..+|++|.+++...+ .+
T Consensus 135 ~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 213 (540)
T PRK13388 135 VAAAGAL-TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPA 213 (540)
T ss_pred hccccCc-CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHH
Confidence 2211111 111235678999999999999999999999999998888888888999999999999999999987544 46
Q ss_pred HhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcE
Q 048242 258 AALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFR 336 (430)
Q Consensus 258 l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~ 336 (430)
+..|+++++.+.+++..+++.++++++|++..+|..+..+...+...... .++++.+ + |++++++..+++. .++++
T Consensus 214 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~~~l~~~-~-G~~~~~~~~~~~~~~~~~~ 290 (540)
T PRK13388 214 VASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDA-DNPLRVA-F-GNEASPRDIAEFSRRFGCQ 290 (540)
T ss_pred HHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCcccc-ccceEEE-E-CCCCCHHHHHHHHHHhCCc
Confidence 77899988888889999999999999999999999999998765433222 4567743 3 5667778888876 67999
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceE-----------EeeCCCCCCCCCCCCceeEE
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLD-----------VLDTKTNQPIPADGKTIGEV 405 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~-----------v~d~~~~~~~~~~~~~~Gel 405 (430)
+++.||+||++.++..... ...+++|+|++++ ++. ++|.+ |+.+..+ ++.|||
T Consensus 291 l~~~YG~tE~~~~~~~~~~-------------~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d~~-g~~~~~~-~~~GEl 354 (540)
T PRK13388 291 VEDGYGSSEGAVIVVREPG-------------TPPGSIGRGAPGV-AIYNPETLTECAVARFDAH-GALLNAD-EAIGEL 354 (540)
T ss_pred eecccccccccceeecCCC-------------CCCCCCCCCCCCc-EEEcCCCCccccceeccCc-cccccCC-CcceEE
Confidence 9999999999766543210 1237899999987 542 34433 5555332 168999
Q ss_pred EEe-cCcccccccCCcccchHhhhCC
Q 048242 406 VMR-GNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 406 ~v~-g~~v~~gY~~~~~~t~~~f~dg 430 (430)
+++ |++++.||++|++++.+.|.+|
T Consensus 355 ~v~~g~~~~~gY~~~~~~t~~~~~~g 380 (540)
T PRK13388 355 VNTAGAGFFEGYYNNPEATAERMRHG 380 (540)
T ss_pred EEecCCcccccccCChHHHHHHhhcC
Confidence 998 9999999999999999888654
No 87
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-46 Score=371.88 Aligned_cols=363 Identities=20% Similarity=0.192 Sum_probs=293.1
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
..++.++|++.+. ++++++++.++++||.||.++++++|+.|.++ |++++++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~ 81 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVP 81 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEE
Confidence 4578899988775 78999999999999999999999999999997 89999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|++|..+.+++.++++.+++++++++++....+.... . . ..++.++. ..+.+
T Consensus 82 v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~---~-------~-~~~~~~~~----------------~~~~~ 134 (529)
T PRK07867 82 VGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD---P-------G-VRVINVDS----------------PAWAD 134 (529)
T ss_pred EEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc---c-------C-ceEEEecc----------------ccHHH
Confidence 99999999999999999999999999987655433321 1 1 12222221 12333
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWS 256 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~ 256 (430)
.+..............++++++++|||||||.||+|+++|+++..........++++.+|++++.+|++|.+++.. ++.
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 214 (529)
T PRK07867 135 ELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAV 214 (529)
T ss_pred HhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHH
Confidence 3332222111223456789999999999999999999999999888888888888999999999999999999875 555
Q ss_pred HHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcE
Q 048242 257 LAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFR 336 (430)
Q Consensus 257 ~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~ 336 (430)
++..|+++++.+.+++..+++.++++++|++..+|+.+..++......... .+++|. ++||+.+++...+..+.+|++
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~-~~~lr~-~~gg~~~~~~~~~~~~~~g~~ 292 (529)
T PRK07867 215 ALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDA-DNPLRI-VYGNEGAPGDIARFARRFGCV 292 (529)
T ss_pred HHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCccccc-ccceEE-EecCCCChHHHHHHHHHhCCc
Confidence 677888888888899999999999999999999999999998765433333 467885 458888887764444477999
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCc------------eeE
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKT------------IGE 404 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~------------~Ge 404 (430)
+++.||+||+++.+..+.. ...+++|.|.++ ++|+|++++++++.+ + .||
T Consensus 293 l~~~YG~TE~~~~~~~~~~-------------~~~~~~g~~~~~---~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Ge 354 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTPD-------------TPPGALGPLPPG---VAIVDPDTGTECPPA--EDADGRLLNADEAIGE 354 (529)
T ss_pred EEEeecccccccccccCCC-------------CCCCCcCCCCCC---EEEEECCCCCCCCCC--ccccccccccCCcceE
Confidence 9999999998755442210 123678999997 567887668888887 6 899
Q ss_pred EEE-ecCcccccccCCcccchHhhhCC
Q 048242 405 VVM-RGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 405 l~v-~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
|++ +|++++.||+++++.+.+.|.+|
T Consensus 355 l~i~~g~~~~~gy~~~~~~~~~~~~~g 381 (529)
T PRK07867 355 LVNTAGPGGFEGYYNDPEADAERMRGG 381 (529)
T ss_pred EEEecCCcccccccCChHhhhhhhcCC
Confidence 999 99999999999999998887654
No 88
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-47 Score=452.68 Aligned_cols=366 Identities=18% Similarity=0.203 Sum_probs=307.0
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++.++|++.++.+|+++|+++.++++||+||.++++++|+.|.++|+++|++|++++++++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++.+++++++++.+....+... .....+.++... .+
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~------------~~~~~~~~~~~~---------------~~--- 2131 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP------------AGVARLPLDRDA---------------EW--- 2131 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc------------cccceEeccchh---------------hh---
Confidence 999999999999999999999999987654322100 111122221100 00
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
. ..+.........++++++|+|||||||+||||+++|+++.+.+.+....++++.+|+++...|++|..++..++.++
T Consensus 2132 -~-~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 2209 (5163)
T PRK12316 2132 -A-DYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPL 2209 (5163)
T ss_pred -h-ccCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHH
Confidence 0 00111112345789999999999999999999999999999999999999999999999999999999988899999
Q ss_pred hhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHh-c-C
Q 048242 259 ALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQ-K-G 334 (430)
Q Consensus 259 ~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~-~ 334 (430)
+.|+++++.+ .+++..+++.++++++|+++++|++++.+.+....... ..+||.+++||+++++++.++|.+ + +
T Consensus 2210 ~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~--~~~lr~~~~gGe~l~~~~~~~~~~~~~~ 2287 (5163)
T PRK12316 2210 LNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGR--PPAVRVYCFGGEAVPAASLRLAWEALRP 2287 (5163)
T ss_pred hCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccC--CcceeEEEEecccCCHHHHHHHHHhCCC
Confidence 9999997765 36899999999999999999999999999876543332 458999999999999999999984 4 7
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
.++++.||+||++..++....... ........++|+|++++ +++|+|++ +++++.| ++|||+|+|+++++
T Consensus 2288 ~~l~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~g--~~GEl~i~G~~v~~ 2357 (5163)
T PRK12316 2288 VYLFNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDAD-LNLLAPG--MAGELYLGGEGLAR 2357 (5163)
T ss_pred cEEEECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECCC-CCCCCCC--CeeEEEecchhhcc
Confidence 889999999999877665433211 00111235799999999 99999988 8999998 99999999999999
Q ss_pred cccCCcccchHhhh
Q 048242 415 GYLKNPKANEEAFA 428 (430)
Q Consensus 415 gY~~~~~~t~~~f~ 428 (430)
||||+|++|+++|.
T Consensus 2358 GY~~~p~~T~~~f~ 2371 (5163)
T PRK12316 2358 GYLNRPGLTAERFV 2371 (5163)
T ss_pred cccCChhhhhhhcc
Confidence 99999999999993
No 89
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-47 Score=374.26 Aligned_cols=353 Identities=22% Similarity=0.271 Sum_probs=289.2
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
...++.+.|.+.++.+|+++|+++.++.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 46789999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhh
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEK 177 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (430)
+|++|.++.+++.++++.++++.++++++....+.... ..++.++.... ..
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------------~~~~~~~~~~~--------------~~-- 163 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------------DAVAVIDPATA--------------GA-- 163 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------------cceEEeccchh--------------hh--
Confidence 99999999999999999999999999887654433210 11222221100 00
Q ss_pred hhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHH--HHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHH
Q 048242 178 LLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAY--LMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTW 255 (430)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~--~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~ 255 (430)
.... ..+...++.++++|||||||.||+|+++|.... .........+++..+|++++.+|++|.+|+...+
T Consensus 164 ---~~~~----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~ 236 (516)
T PRK13383 164 ---EESG----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLM 236 (516)
T ss_pred ---hcCC----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHH
Confidence 0000 011224566789999999999999999997432 1122233456788899999999999999998888
Q ss_pred HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC--CCCCCCceeEEeecCCCCCHHHHHHHH-h
Q 048242 256 SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED--TILPLPHVVNVNTGGSPPPPPILLAMS-Q 332 (430)
Q Consensus 256 ~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~-~ 332 (430)
.++..|+++++...+++..+++.++++++|.++++|.++..+....... ... ++++|.+++||+++++++.++|. .
T Consensus 237 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~gG~~l~~~~~~~~~~~ 315 (516)
T PRK13383 237 LTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNP-LPQLRVVMSSGDRLDPTLGQRFMDT 315 (516)
T ss_pred HHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCC-CCceEEEEECCCCCCHHHHHHHHHH
Confidence 8889999999888899999999999999999999999999998764321 223 78999999999999999999998 6
Q ss_pred cCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcc
Q 048242 333 KGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMV 412 (430)
Q Consensus 333 ~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v 412 (430)
++..+++.||+||++..+..+... .....+++|+|++++ +++|+|++ +++++.+ +.|||+++|+.+
T Consensus 316 ~g~~v~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~g~~~ 381 (516)
T PRK13383 316 YGDILYNGYGSTEVGIGALATPAD----------LRDAPETVGKPVAGC-PVRILDRN-NRPVGPR--VTGRIFVGGELA 381 (516)
T ss_pred cCchhhhcccccccccceeccccc----------cccCCCcccCCCCCc-EEEEECCC-CCCCCCC--CceEEEEecCcc
Confidence 799999999999997655433211 112347899999999 99999987 8999988 899999999999
Q ss_pred cccccCCcc
Q 048242 413 MKGYLKNPK 421 (430)
Q Consensus 413 ~~gY~~~~~ 421 (430)
+.||++++.
T Consensus 382 ~~~Y~~~~~ 390 (516)
T PRK13383 382 GTRYTDGGG 390 (516)
T ss_pred cccccCCch
Confidence 999998764
No 90
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.8e-46 Score=379.87 Aligned_cols=383 Identities=17% Similarity=0.163 Sum_probs=286.9
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHh
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYES-----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGV 90 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~ 90 (430)
.|-.....++.++..+.+++++|+++.+ +++||+||.+++.++|+.|.++|+++||+|+++++|++++++++|||
T Consensus 80 ~wf~~~~~n~~~~~~~~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~ 159 (652)
T TIGR01217 80 QWFPGARLNYAENLLRAAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLAT 159 (652)
T ss_pred EECCCCeeeHHHHHhccCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 3444444445555555567899998843 58999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc---------HHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCC
Q 048242 91 PMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY---------FALAEEALKIMEGKSEGLFKPPVLIVIGDETCDR 161 (430)
Q Consensus 91 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 161 (430)
+++|++++|++|.++.+++.+++++++++++|+++.. ...+.++....+ ....++.+.......
T Consensus 160 ~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~ 232 (652)
T TIGR01217 160 ASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP-------TLRAVVHIPYLGPRE 232 (652)
T ss_pred HHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC-------CccEEEEEeCCCCcc
Confidence 9999999999999999999999999999999998754 223333322222 334455554211000
Q ss_pred CcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHH-HHHHHHHhhcCCCCCCEEE
Q 048242 162 APLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAY-LMSLNVVLTWGMKEGAVYL 240 (430)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~-~~~~~~~~~~~~~~~~~~~ 240 (430)
. ......+...|++++..............++++++|+|||||||.||||+++|.+++ .........++++.+|+++
T Consensus 233 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~ 310 (652)
T TIGR01217 233 T--EAPKIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLF 310 (652)
T ss_pred c--ccccccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEE
Confidence 0 000011234566665442211111123456899999999999999999999999865 3444555567889999999
Q ss_pred eccCchhhhhhHHHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCC--CCCCCCCCCceeE
Q 048242 241 WTLPIFHGNGWCFTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAP--PEDTILPLPHVVN 314 (430)
Q Consensus 241 ~~~pl~h~~gl~~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~--~~~~~~~l~~lr~ 314 (430)
+..|+.|+.+ ..++.+++.|+++++++. .++..+++.++++++|++..+|.++..+.... .....+ +++||.
T Consensus 311 ~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~-l~sLr~ 388 (652)
T TIGR01217 311 YYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHD-LSALQC 388 (652)
T ss_pred EeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCC-hhheeE
Confidence 9999998754 335578889999999852 37889999999999999988888777765532 122345 899999
Q ss_pred EeecCCCCCHHHHHHHH-hcC--cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCC
Q 048242 315 VNTGGSPPPPPILLAMS-QKG--FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKT 391 (430)
Q Consensus 315 v~~~G~~l~~~~~~~~~-~~~--~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~ 391 (430)
+++||+++++++.++++ .++ +.+.+.||+||+++........ .....+++|.|.+|+ +++|+|++
T Consensus 389 i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~ivd~~- 456 (652)
T TIGR01217 389 VASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPT----------LPVHIGEIQAPGLGT-AVQSWDPE- 456 (652)
T ss_pred EEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCC----------CCCcCCccCCCcCCC-ceEEECCC-
Confidence 99999999999999997 454 5678999999975433321110 011347899999999 99999988
Q ss_pred CCCCCCCCCceeEEEEecC--cccccccCCcccch
Q 048242 392 NQPIPADGKTIGEVVMRGN--MVMKGYLKNPKANE 424 (430)
Q Consensus 392 ~~~~~~~~~~~Gel~v~g~--~v~~gY~~~~~~t~ 424 (430)
|++++ | +.|||+++|+ +++.|||+|++.++
T Consensus 457 g~~~~-g--~~GEl~v~gp~p~~~~gy~~~~~~t~ 488 (652)
T TIGR01217 457 GKPVT-G--EVGELVCTNPMPSMPIRFWNDPDGSK 488 (652)
T ss_pred CCCCC-C--CccEEEEecCCCccccceeCCCccch
Confidence 88884 6 8999999996 68999999999764
No 91
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-47 Score=371.95 Aligned_cols=351 Identities=23% Similarity=0.329 Sum_probs=287.0
Q ss_pred HHHHhhCCCcceEEE--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccC
Q 048242 27 ERAATVHPTRKSVVY--ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRL 104 (430)
Q Consensus 27 ~~~~~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~ 104 (430)
+.+++.+|+++|+.+ .+..+||.||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|++|..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 456788999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCC
Q 048242 105 NPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDP 184 (430)
Q Consensus 105 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (430)
+.+++.++++.++++++++++..... ....+ .++++......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~-----------------~~~~~---------------------~~~~~~~~~~~ 123 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG-----------------RTDVE---------------------DLAAFIASADA 123 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc-----------------ccccc---------------------chhhhhhhccc
Confidence 99999999999999999997643210 00000 01111100000
Q ss_pred -CCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcc
Q 048242 185 -EFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCG 262 (430)
Q Consensus 185 -~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~ 262 (430)
.........++++++++|||||||.||+|.++|+++...+........+..+|++++.+|++|.+++.. ++.++..|+
T Consensus 124 ~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~ 203 (488)
T PRK09088 124 LEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGG 203 (488)
T ss_pred cccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCC
Confidence 000112345678999999999999999999999999888777777777889999999999999999885 445566788
Q ss_pred eEEEeCCCCHHHHHHHHH--hhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEee
Q 048242 263 TSVMLRQASAKAIYKAIA--EHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHV 340 (430)
Q Consensus 263 ~~v~~~~~~~~~~~~~l~--~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~ 340 (430)
++++.+.+++..++..+. ++++|+++.+|.+++.+.......... +++||.+++||++++....+++.+.++++++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~-~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~ 282 (488)
T PRK09088 204 SILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAA-LRHLTALFTGGAPHAAEDILGWLDDGIPMVDG 282 (488)
T ss_pred EEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccc-cccceEEEecCCCCCHHHHHHHHHhCCceeee
Confidence 888888889999998886 489999999999999998776544445 78999999999999999988888779999999
Q ss_pred ecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCc
Q 048242 341 YGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNP 420 (430)
Q Consensus 341 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~ 420 (430)
||+||+++........ .....+.+++|+|.+++ +++|+|++ +++++.+ +.|||+++|++++.||++++
T Consensus 283 YG~TE~~~~~~~~~~~--------~~~~~~~~~vG~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gY~~~~ 350 (488)
T PRK09088 283 FGMSEAGTVFGMSVDC--------DVIRAKAGAAGIPTPTV-QTRVVDDQ-GNDCPAG--VPGELLLRGPNLSPGYWRRP 350 (488)
T ss_pred ecccccccccccCCCc--------ccccccCCccccCCCCc-EEEEECCC-CCCCcCC--CceEEEEECCccchhhcCCh
Confidence 9999998654332111 00112447899999999 89999977 8999988 89999999999999999999
Q ss_pred ccchHhhh
Q 048242 421 KANEEAFA 428 (430)
Q Consensus 421 ~~t~~~f~ 428 (430)
+.+++.|.
T Consensus 351 ~~~~~~~~ 358 (488)
T PRK09088 351 QATARAFT 358 (488)
T ss_pred hhhhhhhc
Confidence 99887763
No 92
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=1.6e-46 Score=381.99 Aligned_cols=372 Identities=16% Similarity=0.187 Sum_probs=285.9
Q ss_pred HHHHHHHhhCCCcceEEECC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 24 WFLERAATVHPTRKSVVYES--------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 24 ~~l~~~~~~~p~~~a~~~~~--------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
+.|++..+.+|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 179 ~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~~~~Ga 258 (728)
T PLN03052 179 CCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAIILAGC 258 (728)
T ss_pred HHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 45666656789999999854 4799999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccH------HHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccccc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYF------ALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALS 169 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (430)
+++|++|.++++++.+++++++++++|+++... .....+.... . ..++.+........ ....
T Consensus 259 v~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~--------~-~~~iv~~~~~~~~~---~~~~ 326 (728)
T PLN03052 259 VVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK--------A-PKAIVLPADGKSVR---VKLR 326 (728)
T ss_pred EEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc--------C-CcEEEEeCCCCccc---cccc
Confidence 999999999999999999999999999987542 1122222111 1 22333322110000 0001
Q ss_pred CCccchhhhhhcCCC----CCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCc
Q 048242 170 KGVTEYEKLLETGDP----EFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPI 245 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl 245 (430)
.....|++++..... .........++++++|+|||||||+||||+++|.+++..+......++++.+|++++..++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l 406 (728)
T PLN03052 327 EGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNL 406 (728)
T ss_pred cCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCc
Confidence 123457776543211 1011112356899999999999999999999999987766666566788999999999999
Q ss_pred hhhhhhHHHHHHHhhcceEEEeCC-CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCH
Q 048242 246 FHGNGWCFTWSLAALCGTSVMLRQ-ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPP 324 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~~v~~~~-~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~ 324 (430)
.|+++....+.+++.|+++++++. +++..+++.++++++|++.++|++++.+.+.......+ +++||.++++|+++++
T Consensus 407 ~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~d-lssLr~i~s~Ge~l~~ 485 (728)
T PLN03052 407 GWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLD-WSSIRCFGSTGEASSV 485 (728)
T ss_pred HHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCC-hhheeEEEecCCCCCH
Confidence 999998878889999999999974 46678999999999999999999999998765444556 8999999999999999
Q ss_pred HHHHHHH-hcC-cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCce
Q 048242 325 PILLAMS-QKG-FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTI 402 (430)
Q Consensus 325 ~~~~~~~-~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~ 402 (430)
+...++. .++ .++.+.||+||+++.+...... .....+++|+|.+|+ +++|+|++ |++++.|..+.
T Consensus 486 ~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~v~d~~-g~~v~~g~~~~ 553 (728)
T PLN03052 486 DDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL----------QPQAFAAFSTPAMGC-KLFILDDS-GNPYPDDAPCT 553 (728)
T ss_pred HHHHHHHHhcCCCCeEeeccChhhCcccccCCCC----------CCCCCCccccCCCCc-eEEEECCC-CCCCCCCCCce
Confidence 9988776 445 5799999999997655432211 012347899999999 99999987 99998872126
Q ss_pred eEEEEecC--cccccccCCc
Q 048242 403 GEVVMRGN--MVMKGYLKNP 420 (430)
Q Consensus 403 Gel~v~g~--~v~~gY~~~~ 420 (430)
|||+++++ +...+|+++.
T Consensus 554 GEL~v~~~~~~~~~~~~~~~ 573 (728)
T PLN03052 554 GELALFPLMFGASSTLLNAD 573 (728)
T ss_pred EEEEEeCCCCCCCccccCch
Confidence 99999865 2334666653
No 93
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.4e-46 Score=371.73 Aligned_cols=362 Identities=21% Similarity=0.279 Sum_probs=301.6
Q ss_pred CHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec
Q 048242 21 TPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI 100 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 100 (430)
++.+.|.+.++.+|+++|+.+.++++||+||.+++.++|+.|.+.|+++|++|+++++|+.++++++|||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhh
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLE 180 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
++.++.+++.++++..+++.++++.+...... . ..++.++.. .+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~--------------~-~~~~~~~~~------------------~~~~~ 127 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV--------------G-TQIITLSAL------------------EQAET 127 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc--------------C-CceEEchHh------------------hhhhh
Confidence 99999999999999999999999876422111 1 112222110 01111
Q ss_pred cCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhh
Q 048242 181 TGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAAL 260 (430)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~ 260 (430)
...+ ........+++.++++|||||||.||+|.++|+++...+.+....+++..++++++..|++|..++..++.++..
T Consensus 128 ~~~~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~ 206 (502)
T TIGR01734 128 SGGP-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLAS 206 (502)
T ss_pred hcCC-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHC
Confidence 1111 111123457889999999999999999999999999998888888889999999999999999999888999999
Q ss_pred cceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-Cc
Q 048242 261 CGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK-GF 335 (430)
Q Consensus 261 g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~-~~ 335 (430)
|+++++.++ .++..+++.+.+++++.+..+|.+++.++......... +++++.++++|+++++++.+++. .+ ++
T Consensus 207 G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~-~~~l~~~~~~G~~~~~~~~~~~~~~~~~~ 285 (502)
T TIGR01734 207 GGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQEN-YPHLTHFLFCGEELPVKTAKALLERFPKA 285 (502)
T ss_pred CCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccccccc-CCcccEEEEcCCcCCHHHHHHHHHHCCCc
Confidence 999998864 57899999999999999999999998887654434444 88999999999999999999998 55 89
Q ss_pred EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccc
Q 048242 336 RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKG 415 (430)
Q Consensus 336 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~g 415 (430)
++++.||+||+++.++......+.. ......++|++.+++ +++|+|++ ++.++.+ +.|||+++|++++.|
T Consensus 286 ~~~~~yG~tE~~~~~~~~~~~~~~~------~~~~~~~vg~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~g~~~~~g 355 (502)
T TIGR01734 286 TIYNTYGPTEATVAVTSVKITQEIL------DQYPRLPIGFAKPDM-NLFIMDEE-GEPLPEG--EKGEIVIVGPSVSKG 355 (502)
T ss_pred EEEeCccCCcceEEEEEEEcccccc------ccCCccccccccCCC-EEEEECCC-CCCCCCC--CeeEEEEcccccccc
Confidence 9999999999976554432221100 011235799999999 99999998 8999988 899999999999999
Q ss_pred ccCCcccchHhh
Q 048242 416 YLKNPKANEEAF 427 (430)
Q Consensus 416 Y~~~~~~t~~~f 427 (430)
|+++++.+.+.|
T Consensus 356 y~~~~~~~~~~~ 367 (502)
T TIGR01734 356 YLNNPEKTAEAF 367 (502)
T ss_pred ccCCcccchHhh
Confidence 999999998876
No 94
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.7e-47 Score=448.52 Aligned_cols=369 Identities=18% Similarity=0.209 Sum_probs=310.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHh
Q 048242 11 PKNPANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGV 90 (430)
Q Consensus 11 ~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~ 90 (430)
+.........++.++|+++++.+|+++|+++.++++||+||.++++++|+.|.++|+++|++|++++++++++++++||+
T Consensus 1122 ~~~~~~~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lai 1201 (4334)
T PRK05691 1122 GQAPCAPAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAI 1201 (4334)
T ss_pred cCCCCCCccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 33344445678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccC
Q 048242 91 PMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSK 170 (430)
Q Consensus 91 ~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 170 (430)
+++|++++|++|.++.+++.++++.+++++++++......+... .....+.++....
T Consensus 1202 lkaG~~~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~~----------- 1258 (4334)
T PRK05691 1202 LKAGGAYVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA------------EGVSAIALDSLHL----------- 1258 (4334)
T ss_pred HHhCCEEEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc------------cCceEEeeccccc-----------
Confidence 99999999999999999999999999999999987654322110 0111222221100
Q ss_pred CccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhh
Q 048242 171 GVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNG 250 (430)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~g 250 (430)
.............++++++++|||||||+||||+++|+++.+.+.+....++++.+++++...|++|..+
T Consensus 1259 ----------~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s 1328 (4334)
T PRK05691 1259 ----------DSWPSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVS 1328 (4334)
T ss_pred ----------cccCCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHH
Confidence 0000111112346789999999999999999999999999999999888999999999999999999999
Q ss_pred hHHHHHHHhhcceEEEeC---CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHH
Q 048242 251 WCFTWSLAALCGTSVMLR---QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPIL 327 (430)
Q Consensus 251 l~~~~~~l~~g~~~v~~~---~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 327 (430)
+..++.+++.|+++++.+ .+++..+++.++++++|+++++|++++.+...... .. +++||.+++||+++++++.
T Consensus 1329 ~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~--~~-~~~lr~~~~gGe~l~~~~~ 1405 (4334)
T PRK05691 1329 VWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLA--AA-CTSLRRLFSGGEALPAELR 1405 (4334)
T ss_pred HHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCccc--cc-CCcccEEEEeecCCCHHHH
Confidence 888999999999999985 36899999999999999999999999999875432 23 8899999999999999999
Q ss_pred HHHH-hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEE
Q 048242 328 LAMS-QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEV 405 (430)
Q Consensus 328 ~~~~-~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel 405 (430)
++|. .+ +++++|.||+||++..++...... ......++|+|++++ +++|+|++ +++++.| ++|||
T Consensus 1406 ~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~~-~~~vp~G--~~GEL 1472 (4334)
T PRK05691 1406 NRVLQRLPQVQLHNRYGPTETAINVTHWQCQA---------EDGERSPIGRPLGNV-LCRVLDAE-LNLLPPG--VAGEL 1472 (4334)
T ss_pred HHHHHhCCCcEEEeCCCcChheeeeeeeeccc---------ccCCCCcccceeCCC-EEEEECCC-CCCCCCC--CceEE
Confidence 9998 44 789999999999987665432211 012346899999999 89999988 9999998 89999
Q ss_pred EEecCcccccccCCcccchHhhh
Q 048242 406 VMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 406 ~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
+|+|+++++||+++|++|+++|.
T Consensus 1473 ~i~G~~v~~GYl~~p~~t~~~f~ 1495 (4334)
T PRK05691 1473 CIGGAGLARGYLGRPALTAERFV 1495 (4334)
T ss_pred EecCcccchhhcCCccccHhhCC
Confidence 99999999999999999999983
No 95
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=7.4e-47 Score=387.26 Aligned_cols=364 Identities=15% Similarity=0.199 Sum_probs=284.6
Q ss_pred CCCCHHHHHHHHHhhCCC-cceEEECC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 18 TALTPLWFLERAATVHPT-RKSVVYES-KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~-~~a~~~~~-~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
+..++.++|++.++++|+ ++|+.+.+ +++||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 356899999999999998 57877633 7899999999999999999987 59999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHH--HHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCcc
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAE--EALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVT 173 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 173 (430)
+++|+++.++.+++.++++.++++++|++.+...... ....... .. .++.+++...... ......
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~-------~~-~~i~~~~~~~~~~-----~~~~~~ 347 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLT-------QV-RWVYLEDLKDDVT-----TADKLW 347 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhc-------cc-cEEEhhhhhhhcc-----hhHHHH
Confidence 9999999999999999999999999999876543211 0000000 11 2222222100000 000000
Q ss_pred chhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH
Q 048242 174 EYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF 253 (430)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~ 253 (430)
...+.. .+. .......++|+++++|||||||.||||+++|.++.+.+.+....++++.+|++++.+|++|.+++..
T Consensus 348 ~~~~~~---~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~ 423 (718)
T PRK08043 348 IFAHLL---MPR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTV 423 (718)
T ss_pred HHHHHh---CCc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHH
Confidence 000000 011 1112346789999999999999999999999999988888888888999999999999999999874
Q ss_pred -HHHHHhhcceEEEeCC-CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH
Q 048242 254 -TWSLAALCGTSVMLRQ-ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS 331 (430)
Q Consensus 254 -~~~~l~~g~~~v~~~~-~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 331 (430)
++.++..|+++++.+. ++...+++.+.++++|+++++|+++..+.+.. ...+ +++||.+++||+++++++.+.++
T Consensus 424 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~-~~~lr~i~~gg~~l~~~~~~~~~ 500 (718)
T PRK08043 424 GLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYD-FARLRYVVAGAEKLQESTKQLWQ 500 (718)
T ss_pred HHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--Cccc-ccceEEEEEeCccCCHHHHHHHH
Confidence 6778889999998864 56778889999999999999999998876642 2234 88999999999999999999998
Q ss_pred -hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecC
Q 048242 332 -QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN 410 (430)
Q Consensus 332 -~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~ 410 (430)
.+|+++++.||+||+++.++..... ..+.+++|+|++++ +++|+|.+ +. + +.|||+++|+
T Consensus 501 ~~~g~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~ 561 (718)
T PRK08043 501 DKFGLRILEGYGVTECAPVVSINVPM-----------AAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGP 561 (718)
T ss_pred HHcCCCeecccCcccccceEEecCCc-----------ccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecC
Confidence 6799999999999997666543211 12458999999999 99999876 42 3 5699999999
Q ss_pred cccccccC--Ccc
Q 048242 411 MVMKGYLK--NPK 421 (430)
Q Consensus 411 ~v~~gY~~--~~~ 421 (430)
+++.|||+ +++
T Consensus 562 ~v~~GY~~~e~~~ 574 (718)
T PRK08043 562 NIMNGYLRVEKPG 574 (718)
T ss_pred CccccccCCCCcc
Confidence 99999998 444
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-45 Score=369.35 Aligned_cols=389 Identities=17% Similarity=0.226 Sum_probs=302.9
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
..++.++|++.++.+|+++|+++.++++||+||.++++++|..|.+ +|+++|++|+++++|++++++++|||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 4579999999999999999999999999999999999999999984 899999999999999999999999999999999
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccc------------
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLE------------ 165 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------ 165 (430)
+|++|..+.+++.++++.+++++++++.+....+.+..... ....++.............
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT--------PVKHVILTRMGDQLSTAKGTLVNFVVKYIKR 173 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc--------CcceEEEecccccccccccccccchhhhccc
Confidence 99999999999999999999999999876655444433221 1122222111000000000
Q ss_pred ---ccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc---CCCCCCEE
Q 048242 166 ---YALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW---GMKEGAVY 239 (430)
Q Consensus 166 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~ 239 (430)
.........+.+.+..............++++++++|||||||.||+|.++|.++..++......+ ....++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 253 (560)
T PRK08974 174 LVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELV 253 (560)
T ss_pred ccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEE
Confidence 000001112222222221111111234678999999999999999999999999987665443333 23456788
Q ss_pred EeccCchhhhhhHH-HHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEee
Q 048242 240 LWTLPIFHGNGWCF-TWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 240 ~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
+..+|++|.+++.. .+..+..|+++++.. ..++..+++.++++++|++..+|++++.+.......... ++++|.+++
T Consensus 254 ~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~-~~~lr~~~~ 332 (560)
T PRK08974 254 VTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELD-FSSLKLSVG 332 (560)
T ss_pred EEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCC-ccceeEEEe
Confidence 89999999998764 556667788877663 568889999999999999999999999999876555555 789999999
Q ss_pred cCCCCCHHHHHHHH-hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCC
Q 048242 318 GGSPPPPPILLAMS-QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIP 396 (430)
Q Consensus 318 ~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~ 396 (430)
||+++++.+.++|+ .+|+++++.||+||++..++.+..+. ....+++|.|++++ +++|+|++ +++++
T Consensus 333 gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~~-~~~~~ 400 (560)
T PRK08974 333 GGMAVQQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDDD-GNEVP 400 (560)
T ss_pred cCccCCHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECCC-CCCCC
Confidence 99999999999998 46999999999999987766553321 12347899999999 89999987 89999
Q ss_pred CCCCceeEEEEecCcccccccCCcccchHhhhCC
Q 048242 397 ADGKTIGEVVMRGNMVMKGYLKNPKANEEAFANG 430 (430)
Q Consensus 397 ~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~dg 430 (430)
.| +.|||+++|++++.||+++++.+.+.|.||
T Consensus 401 ~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g 432 (560)
T PRK08974 401 PG--EPGELWVKGPQVMLGYWQRPEATDEVIKDG 432 (560)
T ss_pred CC--CceEEEEecCCcchhhcCChhhhhhhhhcC
Confidence 88 899999999999999999999998887554
No 97
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.1e-46 Score=373.60 Aligned_cols=362 Identities=17% Similarity=0.148 Sum_probs=275.5
Q ss_pred HHHHHHHHHhhCCCcceEEECC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 22 PLWFLERAATVHPTRKSVVYES----KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~~----~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
+.+.|+++++++|+++|+++.+ +++||+||.++++++|+.|.++ ++||+|+|+++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 6788999999999999999876 8899999999999999999987 799999999999999999999999999986
Q ss_pred eecccc--------CChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCccccccc
Q 048242 98 NCINFR--------LNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALS 169 (430)
Q Consensus 98 ~~l~~~--------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 169 (430)
+++ |. ...+++.++++.+++++++++......+.... . . +.+.+..
T Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~---~-------~----~~~~~~~----------- 135 (525)
T PRK05851 82 SIL-PGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVD---S-------S----VTVHDLA----------- 135 (525)
T ss_pred cCC-CCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhh---c-------c----ccccccc-----------
Confidence 543 32 22345567789999999999876544332211 0 0 0011100
Q ss_pred CCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCC-CCCEEEeccCchhh
Q 048242 170 KGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMK-EGAVYLWTLPIFHG 248 (430)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~pl~h~ 248 (430)
.... ..... ......++++++|+|||||||.||||+++|.++.+.+.+....+++. .+|++++.+|++|.
T Consensus 136 -------~~~~-~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 206 (525)
T PRK05851 136 -------TAAH-TNRSA-SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHD 206 (525)
T ss_pred -------cccc-ccccc-cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccC
Confidence 0000 00000 00123578999999999999999999999999999988888888888 89999999999999
Q ss_pred hhhHHHHHHHhhcceEEEeCC--C--CHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC-CCCCCCCceeEEeecCCCCC
Q 048242 249 NGWCFTWSLAALCGTSVMLRQ--A--SAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE-DTILPLPHVVNVNTGGSPPP 323 (430)
Q Consensus 249 ~gl~~~~~~l~~g~~~v~~~~--~--~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~ 323 (430)
+++...+.+++.|+++++.+. + ++..+++.+.++++|++..+|.++..+...... ...+ +++||.+++||++++
T Consensus 207 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~-l~~lr~~~~gG~~l~ 285 (525)
T PRK05851 207 MGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVD-LGALRVALNGGEPVD 285 (525)
T ss_pred ccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCC-HHHhheeEeccccCC
Confidence 999988889999999998762 4 578899999999999886655555555433221 2234 789999999999999
Q ss_pred HHHHHHHHh----cCc---EEEeeecCccccccccccccCCCC--CCCC--hhhhhhhccccCCccccccceEEeeCCCC
Q 048242 324 PPILLAMSQ----KGF---RVTHVYGLSEINGPATVCAWNPNW--DSLP--FEAQARLNARQGVKCMCLEGLDVLDTKTN 392 (430)
Q Consensus 324 ~~~~~~~~~----~~~---~v~~~YG~tE~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~vG~~~~~~~~~~v~d~~~~ 392 (430)
+++.++|.+ +|+ .+++.||+||++..++........ .... ........+++|+|++++ +++|+|++.+
T Consensus 286 ~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~ 364 (525)
T PRK05851 286 CDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGA 364 (525)
T ss_pred HHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCC
Confidence 999988873 354 499999999997665543221100 0000 000112346899999999 9999998845
Q ss_pred CCCCCCCCceeEEEEecCcccccccCCcccch
Q 048242 393 QPIPADGKTIGEVVMRGNMVMKGYLKNPKANE 424 (430)
Q Consensus 393 ~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~ 424 (430)
.+++.| +.|||+++|++++.|||++++.+.
T Consensus 365 ~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~~ 394 (525)
T PRK05851 365 AGVAGR--EIGEIEIRGASMMSGYLGQAPIDP 394 (525)
T ss_pred ccCCCC--CeEEEEEecCchhhccccCCccCC
Confidence 668887 899999999999999999988653
No 98
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.9e-45 Score=368.35 Aligned_cols=376 Identities=22% Similarity=0.276 Sum_probs=291.5
Q ss_pred CCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 16 NFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 16 ~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
+....++.+.|.+.++.+|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 33 ~~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~ 112 (600)
T PRK08279 33 PDSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGA 112 (600)
T ss_pred CCCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccch
Q 048242 96 VLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEY 175 (430)
Q Consensus 96 ~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 175 (430)
+++|+++.++.+++.++++.++++++|++.+....+.+...... ....++..++.... ....+..+
T Consensus 113 ~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-------~~~~~~~~ 178 (600)
T PRK08279 113 VVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA-------RPPRLWVAGGDTLD-------DPEGYEDL 178 (600)
T ss_pred EEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc-------ccceEEEecCcccc-------ccccHHHH
Confidence 99999999999999999999999999999887666655443332 22223332221100 01112222
Q ss_pred hhhhhcCCCC-CCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHH
Q 048242 176 EKLLETGDPE-FAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFT 254 (430)
Q Consensus 176 ~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~ 254 (430)
.+........ .........+++++|+|||||||.||+|+++|.++.+++.+....++++.+|++++.+|++|.+++...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~ 258 (600)
T PRK08279 179 AAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVA 258 (600)
T ss_pred hhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHH
Confidence 2221111111 111133467899999999999999999999999999999888888999999999999999999998865
Q ss_pred H-HHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-h
Q 048242 255 W-SLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-Q 332 (430)
Q Consensus 255 ~-~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~ 332 (430)
+ .++..|+++++.+.+++..+++.++++++|++.++|++++.++......... ..++|.+ +|+++++++.+++. .
T Consensus 259 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~-~~~l~~~--~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 259 WSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDR-DHRLRLM--IGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCcccc-CcceeEE--ecCCCCHHHHHHHHHH
Confidence 4 4566778887778899999999999999999999999999998865544433 5677764 47789999999998 5
Q ss_pred cCc-EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccc----cccce---------EEeeCCCC--CCCC
Q 048242 333 KGF-RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCM----CLEGL---------DVLDTKTN--QPIP 396 (430)
Q Consensus 333 ~~~-~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~----~~~~~---------~v~d~~~~--~~~~ 396 (430)
++. .+++.||+||++..+.. .. ...+++|++.+ +. .+ .|.+.+ + ..++
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~-~~-------------~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~~~~ 399 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFIN-VF-------------NFDGTVGRVPLWLAHPY-AIVKYDVDTGEPVRDAD-GRCIKVK 399 (600)
T ss_pred hCcceeeeeecccccceeecc-cC-------------CCCcccccccccccccc-eeeeeccCcCceeeCCC-CccccCC
Confidence 665 59999999998643321 11 12256676555 33 22 233333 2 2456
Q ss_pred CCCCceeEEE--EecCcccccccCCcccchHhh
Q 048242 397 ADGKTIGEVV--MRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 397 ~~~~~~Gel~--v~g~~v~~gY~~~~~~t~~~f 427 (430)
.+ +.|||+ ++|++++.|| ++++.|.+.|
T Consensus 400 ~g--~~Gel~~~i~~~~~~~GY-~~~~~t~~~~ 429 (600)
T PRK08279 400 PG--EVGLLIGRITDRGPFDGY-TDPEASEKKI 429 (600)
T ss_pred CC--CceeEEEEecCccccccc-CCchhhHHHH
Confidence 66 889998 7899999999 9999888776
No 99
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.9e-45 Score=363.77 Aligned_cols=363 Identities=19% Similarity=0.262 Sum_probs=301.2
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
+++.++|++.++.+|+++++...+..+||+||.++++++|..|.++|+++|++|+++++|+.++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++.++.+++.++++..++++++++.+.... . .....+..++ +.+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--------~~~~~~~~~~------------------~~~~~ 128 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLE-------I--------LGIPVITLDE------------------LKDIF 128 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEeccccccc-------c--------cCCcEEehHH------------------hhhhh
Confidence 9999999999999999999999998754100 0 0111111111 11111
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHh
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAA 259 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~ 259 (430)
.. ...........++++++++|||||||.||+|.++|+++...+.+....+++..++++++..|++|..++...+.++.
T Consensus 129 ~~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~ 207 (503)
T PRK04813 129 AT-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLA 207 (503)
T ss_pred hc-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHh
Confidence 00 01111112346788999999999999999999999999988888888888999999999999999999888888899
Q ss_pred hcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hc-C
Q 048242 260 LCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QK-G 334 (430)
Q Consensus 260 ~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~-~ 334 (430)
.|+++++.+. .++..+++.++++++|+++.+|++++.+.........+ ++++|.++++|+++++.+.++++ .+ +
T Consensus 208 ~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~-~~~l~~i~~~G~~l~~~~~~~~~~~~~~ 286 (503)
T PRK04813 208 SGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEH-LPNLTHFLFCGEELPHKTAKKLLERFPS 286 (503)
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCccc-CCCceEEEEecCcCCHHHHHHHHHHCCC
Confidence 9999998865 58899999999999999999999998877655444445 89999999999999999999998 55 7
Q ss_pred cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc
Q 048242 335 FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK 414 (430)
Q Consensus 335 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~ 414 (430)
..+++.||+||++..++.....+. ........++|++.+++ +++|+|++ +.+++.+ +.|||+++|++++.
T Consensus 287 ~~~~~~yG~tE~~~~~~~~~~~~~------~~~~~~~~~~g~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~ 356 (503)
T PRK04813 287 ATIYNTYGPTEATVAVTSIEITDE------MLDQYKRLPIGYAKPDS-PLLIIDEE-GTKLPDG--EQGEIVISGPSVSK 356 (503)
T ss_pred ceEEeCcccchheeEEEEEEeccc------ccccCCCCcccccCCCC-EEEEECCC-CCCCCCC--CceEEEEecccccc
Confidence 899999999999765544332211 01112346799999999 89999987 9999988 88999999999999
Q ss_pred cccCCcccchHhh
Q 048242 415 GYLKNPKANEEAF 427 (430)
Q Consensus 415 gY~~~~~~t~~~f 427 (430)
|||++++.+...|
T Consensus 357 gy~~~~~~~~~~~ 369 (503)
T PRK04813 357 GYLNNPEKTAEAF 369 (503)
T ss_pred ccCCChhHhHHhh
Confidence 9999999998887
No 100
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.7e-45 Score=359.84 Aligned_cols=358 Identities=21% Similarity=0.293 Sum_probs=280.0
Q ss_pred HHHhhCCCcceEEEC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCC
Q 048242 28 RAATVHPTRKSVVYE--SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLN 105 (430)
Q Consensus 28 ~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~ 105 (430)
.+++.+|+++|+++. +.++||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 456789999999874 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCC
Q 048242 106 PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPE 185 (430)
Q Consensus 106 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (430)
++++.++++.+++++++++............ .....+.+.... .....+++......+.
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~----------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 143 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGA----------DLPLRLSFGGEI-----------DGFGSFEAALAGAGPR 143 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhh----------ccceEEEecCcc-----------cccccHHHHhcccCCC
Confidence 9999999999999999998754332221110 111122222110 0112233322211110
Q ss_pred CCCCCCCCCCCeeEEEeCCCCCCCCceEEe--chHHHHHHH----HHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHh
Q 048242 186 FAWKPPRDEWQSIALGYTSGTTANPKGVLV--SHRAAYLMS----LNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAA 259 (430)
Q Consensus 186 ~~~~~~~~~~~~~~i~~TSGttG~pK~v~~--t~~~l~~~~----~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~ 259 (430)
.....+.++|+|||||||.||+|++ +|.++.... ......+.+..++++++.+|++|.+++...+..+.
T Consensus 144 -----~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 144 -----LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred -----CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 1122357999999999999999996 455544321 12234567888999999999999999876556667
Q ss_pred hcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcE
Q 048242 260 LCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFR 336 (430)
Q Consensus 260 ~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~ 336 (430)
.|+++++.+.+++..+++.|+++++|+++++|+++..+.+.... ...+ ++++|.++.+|+++++++.+.++ .++.+
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 297 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYD-VSSLRAVIHAAAPCPVDVKHAMIDWLGPI 297 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCC-hhhhheEEEcCCCCCHHHHHHHHHhcCCc
Confidence 89999988889999999999999999999999999999875432 2234 78999999999999999999998 56899
Q ss_pred EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccc
Q 048242 337 VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGY 416 (430)
Q Consensus 337 v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY 416 (430)
+++.||+||+++++..... ......+++|+|+++ +++|+|++ +++++.| ++|||+++|++++.||
T Consensus 298 ~~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~g--~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy 362 (501)
T PRK13390 298 VYEYYSSTEAHGMTFIDSP----------DWLAHPGSVGRSVLG--DLHICDDD-GNELPAG--RIGTVYFERDRLPFRY 362 (501)
T ss_pred eeeeecccccCceEEecch----------hhccCCCCcCCcccc--eEEEECCC-CCCCCCC--CceEEEEecCCccccc
Confidence 9999999999765433211 111234789999998 48999977 9999988 8999999999999999
Q ss_pred cCCcccchHhh
Q 048242 417 LKNPKANEEAF 427 (430)
Q Consensus 417 ~~~~~~t~~~f 427 (430)
+++++.|.+.|
T Consensus 363 ~~~~~~t~~~~ 373 (501)
T PRK13390 363 LNDPEKTAAAQ 373 (501)
T ss_pred cCChhhhHHhh
Confidence 99999998876
No 101
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.6e-45 Score=366.59 Aligned_cols=374 Identities=20% Similarity=0.266 Sum_probs=278.0
Q ss_pred CHHHHHHHHHhhCCCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhh
Q 048242 21 TPLWFLERAATVHPTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVP 91 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~ 91 (430)
++.++|++.+..+|+++|+++.+ +++||+||..++.++|+.|.+.| ++||+|+++++|++++++++|||+
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~~ 80 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGAL 80 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHHH
Confidence 57889999999999999998632 78999999999999999999999 689999999999999999999999
Q ss_pred hcCCeeeeccc---cCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccc
Q 048242 92 MTGAVLNCINF---RLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYAL 168 (430)
Q Consensus 92 ~~G~~~~~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (430)
++|++++|+++ ..+.+++.++++.+++++++++.+....+.+....... .....++.++...
T Consensus 81 ~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~---------- 145 (578)
T PRK05850 81 QAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPG-----QSAPPVIEVDLLD---------- 145 (578)
T ss_pred HcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhccc-----ccccceEeecccc----------
Confidence 99999999997 45788999999999999999998766555443221110 0111222222110
Q ss_pred cCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc-C-----CCCCCEEEec
Q 048242 169 SKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW-G-----MKEGAVYLWT 242 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~-~-----~~~~~~~~~~ 242 (430)
+ .... . .......++++++|+|||||||.||||+++|.++++++......+ . ...++++++.
T Consensus 146 ------~---~~~~-~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (578)
T PRK05850 146 ------L---DSPR-G--SDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSW 213 (578)
T ss_pred ------c---ccCC-c--cccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEE
Confidence 0 0000 0 011234568999999999999999999999999988766554332 2 3567899999
Q ss_pred cCchhhhhhHH-HHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHH-HHHHHcCCCC---CCCCCCCcee
Q 048242 243 LPIFHGNGWCF-TWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIV-LNSIVNAPPE---DTILPLPHVV 313 (430)
Q Consensus 243 ~pl~h~~gl~~-~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~-l~~l~~~~~~---~~~~~l~~lr 313 (430)
+|++|.+|+.. .+.+++.|+++++.+. .++..+++.+.+++++++. +|.+ +..+...... ...+ ++++|
T Consensus 214 ~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~-~~~lr 291 (578)
T PRK05850 214 LPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSA-APNFAFELAVRKTSDDDMAGLD-LGGVL 291 (578)
T ss_pred CCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEe-CCcHHHHHHHHhcchhhhcCcc-hhhhe
Confidence 99999999874 7778889999998864 2789999999999998654 5554 4444332111 1234 78999
Q ss_pred EEeecCCCCCHHHHHHHH-hc---C---cEEEeeecCccccccccccccCCCCCC--CChhhh------------hhhcc
Q 048242 314 NVNTGGSPPPPPILLAMS-QK---G---FRVTHVYGLSEINGPATVCAWNPNWDS--LPFEAQ------------ARLNA 372 (430)
Q Consensus 314 ~v~~~G~~l~~~~~~~~~-~~---~---~~v~~~YG~tE~~~~~~~~~~~~~~~~--~~~~~~------------~~~~~ 372 (430)
.++.||+++++++.++|. .+ + ..+++.||+||++..+........... ...... .....
T Consensus 292 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 371 (578)
T PRK05850 292 GIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLV 371 (578)
T ss_pred eEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEE
Confidence 999999999999999987 44 3 368999999998755543322110000 000000 00112
Q ss_pred ccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 373 RQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 373 ~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
++|.|. +. +++|+|++++++++.| +.|||+++|++++.|||++++.|++.|.
T Consensus 372 ~~g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~ 423 (578)
T PRK05850 372 SYGSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFG 423 (578)
T ss_pred eccCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhh
Confidence 456654 45 7999998778899988 8999999999999999999999999884
No 102
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.4e-45 Score=356.99 Aligned_cols=336 Identities=22% Similarity=0.283 Sum_probs=278.6
Q ss_pred HhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhH
Q 048242 30 ATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNV 109 (430)
Q Consensus 30 ~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l 109 (430)
.+..++++|+++.++++||+||.++++++|..|. ++|+|+++++|++++++++|||+++|++++|++|..+.+++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l 84 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAER 84 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHH
Confidence 4556789999999999999999999999999995 46899999999999999999999999999999999999999
Q ss_pred HHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCC
Q 048242 110 AIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWK 189 (430)
Q Consensus 110 ~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (430)
.++++++++++++++.+... . ..... .+.... ..+ ...
T Consensus 85 ~~~l~~~~~~~il~~~~~~~---------~-------~~~~~-~~~~~~--------------~~~-----------~~~ 122 (471)
T PRK07787 85 RHILADSGAQAWLGPAPDDP---------A-------GLPHV-PVRLHA--------------RSW-----------HRY 122 (471)
T ss_pred HHHHHhcCCCEEEecCCccc---------c-------cccce-eeeccc--------------ccc-----------ccC
Confidence 99999999999999763100 0 00100 000000 000 000
Q ss_pred CCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEeC
Q 048242 190 PPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVMLR 268 (430)
Q Consensus 190 ~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~ 268 (430)
....++++++++|||||||.||+|.++|.++...+......+++..++++++.+|++|.+|+.. ++.++..|+++++.+
T Consensus 123 ~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 202 (471)
T PRK07787 123 PEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG 202 (471)
T ss_pred CCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC
Confidence 1235689999999999999999999999999988888888888999999999999999999885 777788999999888
Q ss_pred CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCcccc
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEIN 347 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~ 347 (430)
.+++..+++.++ +++|+++++|.++..+.+..... .. ++++|.++.||+++++.+.++++ .++.++++.||+||++
T Consensus 203 ~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~-~~-l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~ 279 (471)
T PRK07787 203 RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAA-RA-LRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETL 279 (471)
T ss_pred CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcccc-cc-ccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccC
Confidence 899999999999 99999999999999998754322 23 78999999999999999999998 5699999999999997
Q ss_pred ccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 348 GPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
..++..... ....+++|+|++++ +++|+|++ +++++..+++.|||+++|++++.||+++++.|.+.|
T Consensus 280 ~~~~~~~~~-----------~~~~~~vG~~~~g~-~~~i~d~~-~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~ 346 (471)
T PRK07787 280 ITLSTRADG-----------ERRPGWVGLPLAGV-ETRLVDED-GGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAF 346 (471)
T ss_pred cceecCCCC-----------cccCCcccccCCCc-EEEEECCC-CCCCCCCCCCceEEEEECcccchhhcCChhhchhcc
Confidence 544332111 12347899999999 99999988 888874322489999999999999999999999888
Q ss_pred h
Q 048242 428 A 428 (430)
Q Consensus 428 ~ 428 (430)
.
T Consensus 347 ~ 347 (471)
T PRK07787 347 T 347 (471)
T ss_pred c
Confidence 4
No 103
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-44 Score=357.26 Aligned_cols=375 Identities=22% Similarity=0.291 Sum_probs=295.9
Q ss_pred CCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee
Q 048242 20 LTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC 99 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~ 99 (430)
.++.++|++.++++|+++|+.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~ 82 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVN 82 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEe
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhh
Q 048242 100 INFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLL 179 (430)
Q Consensus 100 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (430)
+++.++.+++.++++.+++++++++......+.+...... ....++.+++..... ...+...+.+.+
T Consensus 83 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 149 (533)
T PRK07798 83 VNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP-------KLRTLVVVEDGSGND------LLPGAVDYEDAL 149 (533)
T ss_pred cCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC-------CccEEEEecCCcccc------cCCccccHHHHH
Confidence 9999999999999999999999999876665555432222 344566665432110 111344666666
Q ss_pred hcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhc---------CC------CCCCEEEeccC
Q 048242 180 ETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTW---------GM------KEGAVYLWTLP 244 (430)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~---------~~------~~~~~~~~~~p 244 (430)
........ ......+.++++|||||||.||+|+++|.++..........+ .+ ..+++++...|
T Consensus 150 ~~~~~~~~--~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 227 (533)
T PRK07798 150 AAGSPERD--FGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPP 227 (533)
T ss_pred hccCCcCC--CCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecc
Confidence 54332221 112234557899999999999999999999876544322211 11 46788999999
Q ss_pred chhhhhhHHHHHHHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHH-HHcCCC-CCCCCCCCceeEEeecCC
Q 048242 245 IFHGNGWCFTWSLAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNS-IVNAPP-EDTILPLPHVVNVNTGGS 320 (430)
Q Consensus 245 l~h~~gl~~~~~~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~-l~~~~~-~~~~~~l~~lr~v~~~G~ 320 (430)
++|..++...+.++..|+++++.+ .+++..+++.++++++|++..+|..+.. +..... ....+ ++++|.+++||+
T Consensus 228 l~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~-~~~l~~i~~gG~ 306 (533)
T PRK07798 228 LMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYD-LSSLFAIASGGA 306 (533)
T ss_pred hhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCC-CCceEEEEECCC
Confidence 999999998999999999999998 7899999999999999999999876543 333222 22334 789999999999
Q ss_pred CCCHHHHHHHH-hc-CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccC--CccccccceEEeeCCCCCCCC
Q 048242 321 PPPPPILLAMS-QK-GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQG--VKCMCLEGLDVLDTKTNQPIP 396 (430)
Q Consensus 321 ~l~~~~~~~~~-~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG--~~~~~~~~~~v~d~~~~~~~~ 396 (430)
++++++.++++ .+ +..+++.||+||++.......... ....| ++.++. .++|+|++ +++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~~-~~~~~ 371 (533)
T PRK07798 307 LFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDED-GNPVE 371 (533)
T ss_pred CCCHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECCC-CCCCC
Confidence 99999999998 45 889999999999865444321110 02233 788888 89999988 88888
Q ss_pred CCCCce--eEEEEecCcccccccCCcccchHhhh
Q 048242 397 ADGKTI--GEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 397 ~~~~~~--Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
.| +. |+|+ +++.++.|||++++.+.+.|.
T Consensus 372 ~g--~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~ 402 (533)
T PRK07798 372 PG--SGEIGWIA-RRGHIPLGYYKDPEKTAETFP 402 (533)
T ss_pred CC--CCCeeEEE-eecCccccccCChhhhHHhhc
Confidence 87 55 6665 566899999999999998884
No 104
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-44 Score=356.11 Aligned_cols=366 Identities=22% Similarity=0.309 Sum_probs=292.4
Q ss_pred HHHHHhhCCCcceEEE--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc
Q 048242 26 LERAATVHPTRKSVVY--ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR 103 (430)
Q Consensus 26 l~~~~~~~p~~~a~~~--~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~ 103 (430)
.+..++++|+++|+++ .++.+||.||.+++.++|+.|.++|+++|++|+++++|++++++++|||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 4567888999999987 46889999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCC
Q 048242 104 LNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGD 183 (430)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (430)
++.+++.++++.++++.++++........+...... .....+.+++... ......+.+......
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP-------GVRHRLVLDGDGE---------LEGFVGYAEAVAGLP 146 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC-------CceEEEEecCCCC---------CcccccHHHHhcCCC
Confidence 999999999999999999999877655544433322 2233444432110 012233444332211
Q ss_pred CCCCCCCCCCCCCeeEEEeCCCCCCCCceEEe--chHHHHH---HHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 184 PEFAWKPPRDEWQSIALGYTSGTTANPKGVLV--SHRAAYL---MSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 184 ~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~--t~~~l~~---~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
.. .....++.+.++|||||||.||+|.+ +|.++.. ........+++..++++++.+|++|.+++...+.++
T Consensus 147 ~~----~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~ 222 (511)
T PRK13391 147 AT----PIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVI 222 (511)
T ss_pred CC----CCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHH
Confidence 11 11234567899999999999999995 4655532 223344556778899999999999999998888889
Q ss_pred hhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCc
Q 048242 259 ALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGF 335 (430)
Q Consensus 259 ~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~ 335 (430)
..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ...+ ++++|.+++||+++++++.++++ .+|.
T Consensus 223 ~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~-~~~l~~~~~gg~~~~~~~~~~~~~~~g~ 301 (511)
T PRK13391 223 RLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYD-LSSLEVAIHAAAPCPPQVKEQMIDWWGP 301 (511)
T ss_pred HcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCC-ccceeEEEEccCCCCHHHHHHHHHHcCC
Confidence 999999999889999999999999999999999999988865432 2334 78999999999999999999998 5698
Q ss_pred EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCccccc
Q 048242 336 RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKG 415 (430)
Q Consensus 336 ~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~g 415 (430)
.+++.||+||+++.+...... .....+++|+|+++ .++|+|++ +++++.| +.|||+++|+ ++.|
T Consensus 302 ~v~~~YG~tE~~~~~~~~~~~----------~~~~~~~vG~~~~g--~~~i~d~~-~~~~~~g--~~Gel~~~g~-~~~g 365 (511)
T PRK13391 302 IIHEYYAATEGLGFTACDSEE----------WLAHPGTVGRAMFG--DLHILDDD-GAELPPG--EPGTIWFEGG-RPFE 365 (511)
T ss_pred ceeeeeccccccceEEecCcc----------ccccCCCcCCcccc--eEEEECCC-CCCCCCC--CceEEEEecC-cceE
Confidence 999999999998655432111 11234789999999 48999977 9999888 8999999999 8999
Q ss_pred ccCCcccchHhhh
Q 048242 416 YLKNPKANEEAFA 428 (430)
Q Consensus 416 Y~~~~~~t~~~f~ 428 (430)
||++++.+.+.|.
T Consensus 366 y~~~~~~~~~~~~ 378 (511)
T PRK13391 366 YLNDPAKTAEARH 378 (511)
T ss_pred EcCChhHhHHhhc
Confidence 9999999988773
No 105
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=8.1e-44 Score=352.33 Aligned_cols=364 Identities=22% Similarity=0.299 Sum_probs=285.7
Q ss_pred ceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhc
Q 048242 37 KSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHA 116 (430)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~ 116 (430)
.|++..++.+||.||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++++++|..+.+++.++++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCC-----cccccccCCccchhhhhhcCCCCCCCCCC
Q 048242 117 EAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRA-----PLEYALSKGVTEYEKLLETGDPEFAWKPP 191 (430)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (430)
+++.++++.+....+.+... ....++.......... ............+++....... ...
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 148 (509)
T PRK12406 83 GARVLIAHADLLHGLASALP----------AGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDG 148 (509)
T ss_pred CCcEEEEccchhhhhhhhhh----------cccceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCC
Confidence 99999998876554432211 1111221111100000 0000112233455554432211 123
Q ss_pred CCCCCeeEEEeCCCCCCCCceEEechHH---HHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC
Q 048242 192 RDEWQSIALGYTSGTTANPKGVLVSHRA---AYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR 268 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~pK~v~~t~~~---l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~ 268 (430)
...+++++++|||||||.||+|.++|.. +..........+++..++++++..|++|..+....+.++..|+++++.+
T Consensus 149 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~ 228 (509)
T PRK12406 149 PPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQP 228 (509)
T ss_pred CCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEcc
Confidence 3568999999999999999999987654 3343444455677889999999999999988887777888899999988
Q ss_pred CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHHh-cCcEEEeeecCcc
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMSQ-KGFRVTHVYGLSE 345 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~~~~v~~~YG~tE 345 (430)
.+++..+++.++++++|+++++|+++..++..... ...+ ++++|.++.||+++++++.+++++ +++.+++.||+||
T Consensus 229 ~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 307 (509)
T PRK12406 229 RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYD-VSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTE 307 (509)
T ss_pred CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCC-CCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccc
Confidence 88999999999999999999999999999875432 2334 789999999999999999999984 5899999999999
Q ss_pred ccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccc-cccCCcccch
Q 048242 346 INGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMK-GYLKNPKANE 424 (430)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~-gY~~~~~~t~ 424 (430)
++.++..+... .....+++|++++++ +++|+|++ +++++.| +.|||+++|++++. ||+++++.+.
T Consensus 308 ~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 308 SGAVTFATSED----------ALSHPGTVGKAAPGA-ELRFVDED-GRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred cCceEecCccc----------ccccCCCcCccCCCc-EEEEECCC-CCCCCCC--CceEEEEECCccccccccCCchhcc
Confidence 98755433211 112347899999999 89999987 8999988 89999999999875 9999999887
Q ss_pred HhhhC
Q 048242 425 EAFAN 429 (430)
Q Consensus 425 ~~f~d 429 (430)
..+.|
T Consensus 374 ~~~~~ 378 (509)
T PRK12406 374 EIDRG 378 (509)
T ss_pred cccCC
Confidence 66544
No 106
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.4e-44 Score=345.34 Aligned_cols=338 Identities=23% Similarity=0.271 Sum_probs=279.6
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 47 TWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 47 Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
||.||.++++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++.++++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCC
Q 048242 126 QYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSG 205 (430)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 205 (430)
+....+... ....+.+.... ...................+++++++||||
T Consensus 81 ~~~~~~~~~-------------~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 130 (408)
T TIGR01733 81 ALASRLAGL-------------VLPIILVDPLE-----------------LAALDDAPAPPPPDAPSGPDDLAYVIYTSG 130 (408)
T ss_pred chhhhcccc-------------CCceEEechhh-----------------hhhcccccccccccCCCCCCCcEEEEEcCC
Confidence 765433221 11122221110 000000000000111135789999999999
Q ss_pred CCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCC---HHHHHHHHHhh
Q 048242 206 TTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQAS---AKAIYKAIAEH 282 (430)
Q Consensus 206 ttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~---~~~~~~~l~~~ 282 (430)
|||.||+|.++|+++...+......+.+..+|++++..|++|.+++...+.++..|+++++.+... +..+.+.++++
T Consensus 131 TtG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 210 (408)
T TIGR01733 131 STGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEH 210 (408)
T ss_pred CCCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHc
Confidence 999999999999999999888888889999999999999999999998999999999999987543 58899999999
Q ss_pred CceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcC-cEEEeeecCccccccccccccCCCCC
Q 048242 283 GVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKG-FRVTHVYGLSEINGPATVCAWNPNWD 360 (430)
Q Consensus 283 ~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~-~~v~~~YG~tE~~~~~~~~~~~~~~~ 360 (430)
++|.+.++|.+++.+.+... .. +++||.++.+|+++++++.++++ .++ +.+++.||+||+++.+..........
T Consensus 211 ~~t~l~~~p~~~~~l~~~~~---~~-~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~ 286 (408)
T TIGR01733 211 PVTVLNLTPSLLALLAAALP---PA-LASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDA 286 (408)
T ss_pred CceEEEeCHHHHHHHHHhhh---hc-ccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCcccc
Confidence 99999999999999998765 33 88999999999999999999998 565 89999999999987775433221110
Q ss_pred CCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 361 SLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 361 ~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
. .. +..++|+|++++ +++|+|++ +++++.| +.|||+++|++++.||++++++|.+.|.
T Consensus 287 ~-----~~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 344 (408)
T TIGR01733 287 P-----RE-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFV 344 (408)
T ss_pred C-----Cc-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhccee
Confidence 0 00 257899999999 99999998 9999988 8999999999999999999999988773
No 107
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-44 Score=359.32 Aligned_cols=389 Identities=18% Similarity=0.218 Sum_probs=291.1
Q ss_pred CCCCCCCCcCCCCCCCCCCCCHHHHHHHHHhhCCCcceEEECC---eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEc
Q 048242 1 MEPQNDIDDLPKNPANFTALTPLWFLERAATVHPTRKSVVYES---KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLS 77 (430)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~---~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~ 77 (430)
|.+..+...+...-+.. .++.++|+..++.+|+..++...+ +.+||.||+.++.++|+.|.++|+++||+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~ 81 (579)
T PRK09192 4 MSPTPTTSSLPRRYADF--PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIA 81 (579)
T ss_pred ccccccCccccccccch--hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEc
Confidence 55666666665554444 589999999999888766554332 6799999999999999999999999999999999
Q ss_pred CCchhHHHHHHHhhhcCCeeeeccccCC-------hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCe
Q 048242 78 PNVPAMYEVHFGVPMTGAVLNCINFRLN-------PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPV 150 (430)
Q Consensus 78 ~n~~~~~~~~lA~~~~G~~~~~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (430)
+|++++++++|||+++|++++|+++..+ .+++.++++.+++++++++......+.+..... ..
T Consensus 82 ~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~----------~~ 151 (579)
T PRK09192 82 ETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN----------PL 151 (579)
T ss_pred CCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc----------cc
Confidence 9999999999999999999999976443 578999999999999999887655444332110 11
Q ss_pred EEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh-
Q 048242 151 LIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL- 229 (430)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~- 229 (430)
++. ..+.++....... .......++++++|+|||||||.||+|.++|++++..+.....
T Consensus 152 ~~~-------------------~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~ 211 (579)
T PRK09192 152 LHV-------------------LSHAWFKALPEAD-VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHD 211 (579)
T ss_pred cce-------------------eehhhhcccCCCc-cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhh
Confidence 111 1111111111111 1112346789999999999999999999999999988877776
Q ss_pred hcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC--
Q 048242 230 TWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP-- 302 (430)
Q Consensus 230 ~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~-- 302 (430)
.+++..+|+++.++|++|.+|+.. ++.++..|+++++.+. .++..+++.+.++++++++..|..++.+.....
T Consensus 212 ~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~ 291 (579)
T PRK09192 212 GLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK 291 (579)
T ss_pred cccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc
Confidence 788899999999999999999884 5556777888877652 368899999999999988776666655543321
Q ss_pred -CCCCCCCCceeEEeecCCCCCHHHHHHHHh-c---C---cEEEeeecCccccccccccccCCCCCC--CCh--------
Q 048242 303 -EDTILPLPHVVNVNTGGSPPPPPILLAMSQ-K---G---FRVTHVYGLSEINGPATVCAWNPNWDS--LPF-------- 364 (430)
Q Consensus 303 -~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~---~---~~v~~~YG~tE~~~~~~~~~~~~~~~~--~~~-------- 364 (430)
....+ ++++|.+++||+++++.+.+.+.+ + + ..+++.||+||+++.++.......... ...
T Consensus 292 ~~~~~~-l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (579)
T PRK09192 292 DLAELD-LSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGK 370 (579)
T ss_pred cccccc-hhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCce
Confidence 12234 889999999999999999998874 3 2 348999999999766654322110000 000
Q ss_pred -------hhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 365 -------EAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 365 -------~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
........++|++++++ +++|+|++ ++.++.+ +.|||+++|++++.|||++ +.+.+.|
T Consensus 371 ~~~~~~~~~~~~~~~~vG~~~p~~-~v~i~d~~-~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~ 435 (579)
T PRK09192 371 AVAPGAETRRVRTFVNCGKALPGH-EIEIRNEA-GMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVL 435 (579)
T ss_pred eeccCCCCccceeEeecCCcCCCc-EEEEECCC-CCCCCCC--CEEEEEecCCchhhhhcCC-ccccccc
Confidence 00001135799999999 89999987 8999988 8999999999999999999 5665555
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.6e-43 Score=381.17 Aligned_cols=366 Identities=19% Similarity=0.184 Sum_probs=289.0
Q ss_pred CCCHHHHHHHHHhhCC-CcceEEE-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 19 ALTPLWFLERAATVHP-TRKSVVY-ESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p-~~~a~~~-~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..++.+.+++.++++| ++.++.+ .++++||+||.++++++|+.|.+ |+++||+|+++++|+++++++++||+++|++
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 708 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGRV 708 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCCE
Confidence 4678888888888887 5567665 35899999999999999999975 9999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHH--HHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccc
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALA--EEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTE 174 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 174 (430)
++|++|..+.+++.++++++++++++++++..... ........ ....++.+++..... .....
T Consensus 709 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~~~~~~~--------~~~~~ 773 (1140)
T PRK06814 709 PAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE-------FGIRIIYLEDVRAQI--------GLADK 773 (1140)
T ss_pred EEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc-------cCceEEEehHhhccC--------ChHHH
Confidence 99999999999999999999999999987654432 11111111 234455554321100 00011
Q ss_pred hhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhH-H
Q 048242 175 YEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWC-F 253 (430)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~-~ 253 (430)
+.+......+... .....++|+++++|||||||.||+|.++|+++.+.+......++...+|++++.+|++|.+++. .
T Consensus 774 ~~~~~~~~~~~~~-~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 774 IKGLLAGRFPLVY-FCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHhhccCCccc-cCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 1121111111111 1135678999999999999999999999999998888888888999999999999999999985 5
Q ss_pred HHHHHhhcceEEEeCC-CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-
Q 048242 254 TWSLAALCGTSVMLRQ-ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS- 331 (430)
Q Consensus 254 ~~~~l~~g~~~v~~~~-~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~- 331 (430)
.+.++..|+++++.+. .+...+.+.++++++|+++.+|++++.+.+... ..+ ++++|.+++||+++++++.+.++
T Consensus 853 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~--~~~-~~~lr~v~~gg~~l~~~~~~~~~~ 929 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAH--PYD-FRSLRYVFAGAEKVKEETRQTWME 929 (1140)
T ss_pred HHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcc--ccc-ccceeEEEEcCCcCCHHHHHHHHH
Confidence 7778889999988864 567778899999999999999999999887532 234 88999999999999999999998
Q ss_pred hcCcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCc
Q 048242 332 QKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNM 411 (430)
Q Consensus 332 ~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~ 411 (430)
.+++++++.||+||+++.++.+... ..+.+++|+|.+++ ++++.+.+ + .+ +.|||+++|++
T Consensus 930 ~~~~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~g~~ 990 (1140)
T PRK06814 930 KFGIRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVRGPN 990 (1140)
T ss_pred HhCCcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEeCCC
Confidence 6699999999999998766543221 12347899999999 89998764 2 23 67999999999
Q ss_pred ccccccCCcccc
Q 048242 412 VMKGYLKNPKAN 423 (430)
Q Consensus 412 v~~gY~~~~~~t 423 (430)
++.|||++++.+
T Consensus 991 ~~~gY~~~~~~~ 1002 (1140)
T PRK06814 991 VMLGYLRAENPG 1002 (1140)
T ss_pred cchhhcCCCCCC
Confidence 999999876543
No 109
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=324.87 Aligned_cols=384 Identities=20% Similarity=0.220 Sum_probs=302.2
Q ss_pred CCCCCCCHHHHHHHHHhhCCCcceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 15 ANFTALTPLWFLERAATVHPTRKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 15 ~~~~~~t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
..-+..++.+.|.++++++|+++|+++.+ +++||+|+.++++++|+.|...|++.||+|+++|+|++|++.+.|++++
T Consensus 72 ~rr~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaK 151 (649)
T KOG1179|consen 72 SRRERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAK 151 (649)
T ss_pred hhccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHh
Confidence 34567899999999999999999999976 7999999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
+|++.+.||+++..+.+.|.+..++++.+|++.+....+.++.+.+.. ..-.+...+..+ ...+.
T Consensus 152 lGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~------~~i~~~~~~~~~---------~~~g~ 216 (649)
T KOG1179|consen 152 LGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIK------NGIHVFSLGPTS---------VPDGI 216 (649)
T ss_pred hCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhh------ccceEEecCCCC---------CCchH
Confidence 999999999999999999999999999999999988777776443321 122333333322 22344
Q ss_pred cchhhhhhcCCCCCCC---CCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhh
Q 048242 173 TEYEKLLETGDPEFAW---KPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGN 249 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~ 249 (430)
.++.+.++....++.+ ....+-.++++.+|||||||.||+.+++|...+.........++++.+|+++.++|+||..
T Consensus 217 ~~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsa 296 (649)
T KOG1179|consen 217 ESLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSA 296 (649)
T ss_pred HHHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHH
Confidence 4555555555444422 2345667899999999999999999999999888877788899999999999999999998
Q ss_pred hhHH-HHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHH
Q 048242 250 GWCF-TWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 250 gl~~-~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 328 (430)
|.+. ...++..|+|+|+-.+|++..+|+...+|++|++-..-.+++.|++.++.+... -..+|.++ |..+.+++++
T Consensus 297 a~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er-~HkVRla~--GNGLR~diW~ 373 (649)
T KOG1179|consen 297 AGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEER-QHKVRLAY--GNGLRPDIWQ 373 (649)
T ss_pred HHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhc-CceEEEEe--cCCCCchHHH
Confidence 8774 777788999999999999999999999999999999999999999998887665 66777766 7789999999
Q ss_pred HHH-hcCcE-EEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCC----------C
Q 048242 329 AMS-QKGFR-VTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPI----------P 396 (430)
Q Consensus 329 ~~~-~~~~~-v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~----------~ 396 (430)
+|. +||.. |.+.||+||...-. .+..+. -..+...+...+-+..+ ++-=+|+++++++ +
T Consensus 374 ~Fv~RFg~~~IgE~YgaTEgn~~~-~N~d~~-------vGA~G~~~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~ 444 (649)
T KOG1179|consen 374 QFVKRFGIIKIGEFYGATEGNSNL-VNYDGR-------VGACGFMSRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCP 444 (649)
T ss_pred HHHHHcCCCeEEEEeccccCccee-eeecCc-------cccccchhhhhhhccce-EEEEecCCCCceeecCCceEEECC
Confidence 997 88866 99999999975332 222110 00011111122333333 3444677777765 4
Q ss_pred CCCCceeEEEE--ecCcc---cccccCCcccchHhh
Q 048242 397 ADGKTIGEVVM--RGNMV---MKGYLKNPKANEEAF 427 (430)
Q Consensus 397 ~~~~~~Gel~v--~g~~v---~~gY~~~~~~t~~~f 427 (430)
+| |+|.|.- ...+- |.||.+++++|.++.
T Consensus 445 ~G--EpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl 478 (649)
T KOG1179|consen 445 PG--EPGLLVGKIVQKNPLRSFLGYAGPKKATEKKL 478 (649)
T ss_pred CC--CCceEEEEeccCCchhhhccccCchhhhhhhh
Confidence 44 8887743 33445 899999888886653
No 110
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-43 Score=349.50 Aligned_cols=356 Identities=22% Similarity=0.273 Sum_probs=284.0
Q ss_pred ceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhc
Q 048242 37 KSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHA 116 (430)
Q Consensus 37 ~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~ 116 (430)
.++.+.+..+||.||.+++.++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++..+.+++.++++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 45566779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCC
Q 048242 117 EAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQ 196 (430)
Q Consensus 117 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (430)
+++++++++.....+.+....... ....++..+.. ......+.+........ .....++
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~----~~~~~~~ 141 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA------GVPLLLVVAGP-----------VPGFRSYEEALAAQPDT----PIADETA 141 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc------cccEEEEeCCC-----------CCccccHHHHHhcCCCC----CCCCCCc
Confidence 999999998776655544332210 12333333211 01223444444322111 1234567
Q ss_pred eeEEEeCCCCCCCCceEEechHHHHHHH------HHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCC
Q 048242 197 SIALGYTSGTTANPKGVLVSHRAAYLMS------LNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQA 270 (430)
Q Consensus 197 ~~~i~~TSGttG~pK~v~~t~~~l~~~~------~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~ 270 (430)
.++++|||||||.||+|+++|.++.... ...........++++++..|++|.+++...+.++..|+++++.+.+
T Consensus 142 ~a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~ 221 (502)
T PRK08276 142 GADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKF 221 (502)
T ss_pred ceEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCC
Confidence 8999999999999999999887653221 1222222235778999999999999988878888999999998889
Q ss_pred CHHHHHHHHHhhCceEEeeccHHHHHHHcCCCC--CCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCcccc
Q 048242 271 SAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPE--DTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEIN 347 (430)
Q Consensus 271 ~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~--~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~ 347 (430)
++..+++.++++++|+++++|+++..+++.... ...+ ++++|.++++|++++.++.++++ .++..+++.||+||++
T Consensus 222 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~-~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~ 300 (502)
T PRK08276 222 DAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYD-VSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGG 300 (502)
T ss_pred CHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCC-cccceEEEecCCCCCHHHHHHHHHHhCcHhhhhccccccc
Confidence 999999999999999999999999999886542 2345 78999999999999999999998 5688899999999998
Q ss_pred ccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 348 GPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
+.+...... .....+++|+|+ ++ +++|+|++ +++++.| +.|||+++|++++.||+++++.+.+.|
T Consensus 301 ~~~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~ 365 (502)
T PRK08276 301 GVTVITSED----------WLAHPGSVGKAV-LG-EVRILDED-GNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAAR 365 (502)
T ss_pred ceeEecCcc----------ccccCCCcceec-cc-EEEEECCC-CCCCcCC--CceEEEEECCCccchhcCCHHHHHHHh
Confidence 755443211 112347899999 77 89999977 8999988 899999999999999999999998887
Q ss_pred hC
Q 048242 428 AN 429 (430)
Q Consensus 428 ~d 429 (430)
.+
T Consensus 366 ~~ 367 (502)
T PRK08276 366 NP 367 (502)
T ss_pred cC
Confidence 43
No 111
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=9.2e-43 Score=340.16 Aligned_cols=324 Identities=20% Similarity=0.225 Sum_probs=268.5
Q ss_pred HHHHH-HHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec
Q 048242 22 PLWFL-ERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI 100 (430)
Q Consensus 22 ~~~~l-~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l 100 (430)
+.+.. ...++.+|+++|+++.++.+||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++|+
T Consensus 4 ~~~~~~~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~ 83 (458)
T PRK09029 4 FSDWPWRHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPL 83 (458)
T ss_pred hhcChHHHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeec
Confidence 33333 45678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhh
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLE 180 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (430)
+|..+.+++..+++++++++++++.+... +.. ..... .. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------------~~~~~-~~---------------------~--- 123 (458)
T PRK09029 84 NPQLPQPLLEELLPSLTLDFALVLEGENT-FSA--------------LTSLH-LQ---------------------L--- 123 (458)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh--------------ccccc-cc---------------------c---
Confidence 99999999999999999999999876422 100 00000 00 0
Q ss_pred cCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhh
Q 048242 181 TGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAAL 260 (430)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~ 260 (430)
. .. .......++++++++|||||||.||+|.++|+++...+......++...+++++..+|++|.+|+...+.++..
T Consensus 124 -~-~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~ 200 (458)
T PRK09029 124 -V-EG-AHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYA 200 (458)
T ss_pred -c-cc-cCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhC
Confidence 0 00 01123457889999999999999999999999999998888888889999999999999999999877788889
Q ss_pred cceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEee
Q 048242 261 CGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHV 340 (430)
Q Consensus 261 g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~ 340 (430)
|+++++.+. ..+++.+ .++|.+..+|+++..+...... ..++|.+++||+++++.+.+++++++.++++.
T Consensus 201 G~~v~~~~~---~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~ 270 (458)
T PRK09029 201 GATLVVRDK---QPLEQAL--AGCTHASLVPTQLWRLLDNRSE-----PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCG 270 (458)
T ss_pred CceEEeCCh---HHHHHHH--hhceeeecChHHHHHHHhcccc-----CCcceEEEECCCCCCHHHHHHHHHcCCcEecc
Confidence 999887764 4566666 4899999999999999876543 34799999999999999999999889999999
Q ss_pred ecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCc
Q 048242 341 YGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNP 420 (430)
Q Consensus 341 YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~ 420 (430)
||+||++........ ....++|+|++++ +++|+| |||+++|++++.||++++
T Consensus 271 YG~tE~~~~~~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~ 322 (458)
T PRK09029 271 YGLTEMASTVCAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQG 322 (458)
T ss_pred ccccccCcceeccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCc
Confidence 999999765433211 1125699999999 888863 799999999999999999
Q ss_pred ccchHh
Q 048242 421 KANEEA 426 (430)
Q Consensus 421 ~~t~~~ 426 (430)
+.+...
T Consensus 323 ~~~~~~ 328 (458)
T PRK09029 323 QLVPLV 328 (458)
T ss_pred cccccc
Confidence 877543
No 112
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-42 Score=345.16 Aligned_cols=365 Identities=20% Similarity=0.203 Sum_probs=281.2
Q ss_pred CHHHHHHHHHhhCCCcceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 21 TPLWFLERAATVHPTRKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
++.+.+...++.+|+..++...+ +.+||.||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57888888999999999997654 6899999999999999999999999999999999999999999999999999999
Q ss_pred eccccCChhhH-------HHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCC
Q 048242 99 CINFRLNPLNV-------AIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKG 171 (430)
Q Consensus 99 ~l~~~~~~~~l-------~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 171 (430)
++++..+..++ .++++.++++.+++++........... ....+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~-------------------- 132 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE----------KGIRV-------------------- 132 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc----------cCCce--------------------
Confidence 99988776544 446777899999998765432222100 01111
Q ss_pred ccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCC-CEEEeccCchhhhh
Q 048242 172 VTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEG-AVYLWTLPIFHGNG 250 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~pl~h~~g 250 (430)
..++++...... ......++++++++|||||||+||+|+++|+++...+......+++..+ |++++.+|++|..+
T Consensus 133 -~~~~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 208 (545)
T PRK07768 133 -LTVADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMG 208 (545)
T ss_pred -eehhhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchH
Confidence 222333221111 1123467899999999999999999999999999888887777888776 89999999999999
Q ss_pred hHH-HHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCC----CCCCCCCCCceeEEeecCCC
Q 048242 251 WCF-TWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAP----PEDTILPLPHVVNVNTGGSP 321 (430)
Q Consensus 251 l~~-~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~----~~~~~~~l~~lr~v~~~G~~ 321 (430)
+.. .+.++..|+++++... .++..+++.+++++++++..+|..+..+.... .....+ +++||.++.+|++
T Consensus 209 ~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~lr~~~~~g~~ 287 (545)
T PRK07768 209 MVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFD-LSSLRFALNGAEP 287 (545)
T ss_pred HHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCC-chheeeEEeccCC
Confidence 885 5556788998888753 36788899999999999988887776665422 111244 8899999999999
Q ss_pred CCHHHHHHHHh----cCc---EEEeeecCccccccccccccCCCC-CCC-Ch-------------hhhhhhccccCCccc
Q 048242 322 PPPPILLAMSQ----KGF---RVTHVYGLSEINGPATVCAWNPNW-DSL-PF-------------EAQARLNARQGVKCM 379 (430)
Q Consensus 322 l~~~~~~~~~~----~~~---~v~~~YG~tE~~~~~~~~~~~~~~-~~~-~~-------------~~~~~~~~~vG~~~~ 379 (430)
+++.+.+++.+ +|. .+++.||+||++..++........ ... .. .......+++|+|++
T Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 367 (545)
T PRK07768 288 IDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLP 367 (545)
T ss_pred CCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCC
Confidence 99999998874 454 499999999998765543322100 000 00 000224468999999
Q ss_pred cccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccch
Q 048242 380 CLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANE 424 (430)
Q Consensus 380 ~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~ 424 (430)
++ +++|+|++ +++++.+ +.|||+++|+.++.||++++....
T Consensus 368 g~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~ 408 (545)
T PRK07768 368 GL-EVRVVDED-GQVLPPR--GVGVIELRGESVTPGYLTMDGFIP 408 (545)
T ss_pred CC-EEEEECCC-CCCCCCC--CEEEEEEccCcccccccCCCCCcc
Confidence 99 99999977 8999988 899999999999999998665443
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.2e-41 Score=330.58 Aligned_cols=318 Identities=22% Similarity=0.288 Sum_probs=261.0
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 47 TWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 47 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCC
Q 048242 127 YFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGT 206 (430)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 206 (430)
..... .... .+.+.................+++++++|||||
T Consensus 81 ~~~~~-----------------~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 122 (436)
T TIGR01923 81 LEEKD-----------------FQAD---------------------SLDRIEAAGRYETSLSASFNMDQIATLMFTSGT 122 (436)
T ss_pred ccccc-----------------eeec---------------------chHhhhhcccccccccccCCcCceEEEEeCCCC
Confidence 32100 0000 000000001111111123456789999999999
Q ss_pred CCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceE
Q 048242 207 TANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTN 286 (430)
Q Consensus 207 tG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~ 286 (430)
||.||+|+++|+++...+......++++.+|++++.+|++|.+++...+.++..|+++++.+.++ .+++.++++++|+
T Consensus 123 TG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~ 200 (436)
T TIGR01923 123 TGKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTH 200 (436)
T ss_pred CCCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeE
Confidence 99999999999999998888888889999999999999999999988888899999999887653 8999999999999
Q ss_pred EeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeeecCccccccccccccCCCCCCCChhh
Q 048242 287 FCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLPFEA 366 (430)
Q Consensus 287 ~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 366 (430)
+.++|+++..+...... .+++|.++++|+++++++.+.+++.++++++.||+||+++.++......
T Consensus 201 ~~~~P~~l~~l~~~~~~-----~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~--------- 266 (436)
T TIGR01923 201 ISLVPTQLNRLLDEGGH-----NENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEM--------- 266 (436)
T ss_pred EEeHHHHHHHHHhCcCC-----CCceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCccc---------
Confidence 99999999999886543 3689999999999999999999888999999999999987655433211
Q ss_pred hhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhhh
Q 048242 367 QARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAFA 428 (430)
Q Consensus 367 ~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f~ 428 (430)
. ....++|++++++ +++|.+.+ . + +.|||+++|+.++.||+++++.+...|.
T Consensus 267 ~-~~~~~~G~~~~~~-~~~i~~~~-~-----~--~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 318 (436)
T TIGR01923 267 L-HARPDVGRPLAGR-EIKIKVDN-K-----E--GHGEIMVKGANLMKGYLYQGELTPAFEQ 318 (436)
T ss_pred c-ccccCCCccCCCc-EEEEEeCC-C-----C--CceEEEEECCccchhhCCChhhhhhhhc
Confidence 0 1112489999999 89984433 1 1 5799999999999999998888766553
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.6e-42 Score=336.23 Aligned_cols=301 Identities=14% Similarity=0.115 Sum_probs=244.2
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEe
Q 048242 45 HYTWQQTYQRCRRLASALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (430)
-+.|+||.+++.++|+.|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++..++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 47899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeC
Q 048242 124 DQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYT 203 (430)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T 203 (430)
+.+.... . .... ... .....+++.++++||
T Consensus 99 ~~~~~~~----------------~------~~~~------------------------~~~----~~~~~~~~~~~i~~T 128 (452)
T PRK07445 99 LDQLKLS----------------H------PPPL------------------------PSQ----GILPNLETGWIMIPT 128 (452)
T ss_pred cCccccc----------------c------CCCC------------------------Ccc----ccCCCCCCcEEEEeC
Confidence 7643210 0 0000 000 011345789999999
Q ss_pred CCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhC
Q 048242 204 SGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHG 283 (430)
Q Consensus 204 SGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~ 283 (430)
|||||.||+|++||+++...+.+....+++.. ++.++.+|++|.+|+...+.++..|+++++.+............+++
T Consensus 129 SGTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~ 207 (452)
T PRK07445 129 GGSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPS 207 (452)
T ss_pred CCCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcC
Confidence 99999999999999999888887777666654 46788999999999988888899999999886433333334456789
Q ss_pred ceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeeecCccccccccccccCCCCCCCC
Q 048242 284 VTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWDSLP 363 (430)
Q Consensus 284 vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~ 363 (430)
+|+++++|++++.+.+.. ... +++||.+++||+++++++.++++++++++++.||+||+++.++.....
T Consensus 208 ~t~~~~vP~~l~~l~~~~---~~~-l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~------- 276 (452)
T PRK07445 208 DFFLSLVPTQLQRLLQLR---PQW-LAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKPD------- 276 (452)
T ss_pred ceEEEehHHHHHHHHhhC---hhh-hhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCch-------
Confidence 999999999999998732 223 789999999999999999999887899999999999987655432211
Q ss_pred hhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcc
Q 048242 364 FEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPK 421 (430)
Q Consensus 364 ~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~ 421 (430)
.......++|+|++++ +++|+ .+ +.|||+++|++++.|||+++.
T Consensus 277 --~~~~~~~~~G~~~p~~-~v~i~---------~g--~~Gel~v~g~~~~~gY~~~~~ 320 (452)
T PRK07445 277 --DFLAGNNSSGQVLPHA-QITIP---------AN--QTGNITIQAQSLALGYYPQIL 320 (452)
T ss_pred --hhccCCCcCCccCCCC-eEEEc---------CC--CcceEEEeCCccchhhcCCcc
Confidence 1112346799999999 89998 23 679999999999999998764
No 115
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.9e-41 Score=350.57 Aligned_cols=358 Identities=13% Similarity=0.136 Sum_probs=266.7
Q ss_pred CCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 17 FTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 17 ~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
....++.++|+++++.+|+++|+++.++.+||+||.++++++|+.|.+.|+++||+|+|+++|+++++++++||+++|++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav 523 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAV 523 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCE
Confidence 55678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchh
Q 048242 97 LNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYE 176 (430)
Q Consensus 97 ~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 176 (430)
++|++|. .++.++++.++++++|++.+....+.. ....++.+++...... ..........+.
T Consensus 524 ~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~-------------~~~~iiv~~~~~~~~~--~~~~~~~~~~~~ 585 (994)
T PRK07868 524 AVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQ-------------LPGRVLVLGGGESRDL--DLPDDADVIDME 585 (994)
T ss_pred EEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHh-------------cCceEEEecCCccccc--cCCcchhhhhhh
Confidence 9999985 679999999999999998766543322 1234555543210000 000000111111
Q ss_pred hhhhcCCCCCC--CCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHH
Q 048242 177 KLLETGDPEFA--WKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFT 254 (430)
Q Consensus 177 ~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~ 254 (430)
+........+. ...+..++++++|+|| ||||+||++.++|.+...........+++..+|++++.+|++|.+++...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 11111000010 0112236899999998 68888888888887765555555566788899999999999999999876
Q ss_pred HHHHhhcceEE-EeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-h
Q 048242 255 WSLAALCGTSV-MLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-Q 332 (430)
Q Consensus 255 ~~~l~~g~~~v-~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~ 332 (430)
+.+++.|++.+ +.+.+++..+++.|+++++|+++++|++++.+++.......+ +++||.++ |+.+++++.+++. .
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~-~~slr~~~--g~gl~~~l~~~~~~~ 741 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHG-NHPVRLFI--GSGMPTGLWERVVEA 741 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCC-CCceEEEe--cCCCCHHHHHHHHHH
Confidence 66656555544 556789999999999999999999999999999875444444 78999876 3459999999998 5
Q ss_pred cC-cEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEe-----------eCCCC--CCCCCC
Q 048242 333 KG-FRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVL-----------DTKTN--QPIPAD 398 (430)
Q Consensus 333 ~~-~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~-----------d~~~~--~~~~~~ 398 (430)
++ +++++.||+||++.... +.. ..+.+++|+|++++.+++|. |.+ | +.++.|
T Consensus 742 ~~~~~l~~~YG~TE~~~~~~-~~~------------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~-G~~~~~~~g 807 (994)
T PRK07868 742 FAPAHVVEFFATTDGQAVLA-NVS------------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDR-GFVRRAEVN 807 (994)
T ss_pred hCchheeeeeeccccccccc-ccC------------CCCCcccCCccCCCCceeEEEecCcCCceeecCC-ceEEEcCCC
Confidence 65 88999999999864432 110 12347899999996335543 333 5 556666
Q ss_pred CCceeEEEEecCcc
Q 048242 399 GKTIGEVVMRGNMV 412 (430)
Q Consensus 399 ~~~~Gel~v~g~~v 412 (430)
+.|||+++|+..
T Consensus 808 --e~Gel~~~~~~~ 819 (994)
T PRK07868 808 --EVGVLLARARGP 819 (994)
T ss_pred --CceEEEEecCCC
Confidence 899999999853
No 116
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.2e-41 Score=331.37 Aligned_cols=319 Identities=14% Similarity=0.137 Sum_probs=238.4
Q ss_pred cCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc------HHHHHHHHHHhhccCCCCCCCCe
Q 048242 77 SPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY------FALAEEALKIMEGKSEGLFKPPV 150 (430)
Q Consensus 77 ~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 150 (430)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++.. ...+.+..... ....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 72 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA--------PAKA 72 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc--------cceE
Confidence 589999999999999999999999999999999999999999999998642 11222211110 1122
Q ss_pred EEEecCCCCCCCcccccccCCccchhhhhhcCCC------CCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHH
Q 048242 151 LIVIGDETCDRAPLEYALSKGVTEYEKLLETGDP------EFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMS 224 (430)
Q Consensus 151 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~ 224 (430)
++.......... ....+...|.+++..... .........++++++|+|||||||.||||++||++++...
T Consensus 73 i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~ 148 (499)
T PLN03051 73 IVLPAAGEPVAV----PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCA 148 (499)
T ss_pred EEEeccCcccCC----ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHH
Confidence 222111100000 000122345555421110 0111112356899999999999999999999999987776
Q ss_pred HHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC-CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC-
Q 048242 225 LNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ-ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP- 302 (430)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~-~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~- 302 (430)
......++++.+|++++.+|++|.+++..++.+++.|+++++.+. +++..+++.|+++++|+++++|+++..+.+...
T Consensus 149 ~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~ 228 (499)
T PLN03051 149 SDGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF 228 (499)
T ss_pred HHHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc
Confidence 666666788899999999999999998877888899999998874 788999999999999999999999999987643
Q ss_pred -CCCCCCCCceeEEeecCCCCCHHHHHHHHh-c--CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCcc
Q 048242 303 -EDTILPLPHVVNVNTGGSPPPPPILLAMSQ-K--GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKC 378 (430)
Q Consensus 303 -~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~-~--~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 378 (430)
....+ +++||.+++||+++++++.+++++ + ++++++.||+||+++.++..... .....+++|+|.
T Consensus 229 ~~~~~~-~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~ 297 (499)
T PLN03051 229 AMEGLD-WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL----------QPQAPGAFSTAS 297 (499)
T ss_pred ccccCC-chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc----------CCCCCccccCCC
Confidence 23344 889999999999999999988776 3 47899999999986543322110 011347899999
Q ss_pred ccccceEEeeCCCCCCCCCCCCceeEEEEecCcc--cccccCCc
Q 048242 379 MCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMV--MKGYLKNP 420 (430)
Q Consensus 379 ~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v--~~gY~~~~ 420 (430)
+++ +++|+|++ +++++.|..++|||+++|+.+ +.|||+++
T Consensus 298 ~~~-~~~ivd~~-g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~ 339 (499)
T PLN03051 298 LGT-RFVLLNDN-GVPYPDDQPCVGEVALAPPMLGASDRLLNAD 339 (499)
T ss_pred CCc-eEEEECCC-CCCCCCCCCcceEEEEecCcCCCCccccCCc
Confidence 999 99999987 999988732479999999976 58999765
No 117
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=1.3e-38 Score=334.76 Aligned_cols=363 Identities=16% Similarity=0.066 Sum_probs=270.4
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEEC---C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYE---S--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~---~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
...|+.++|.+.++++|+++|+... + +++||+|+.+++.++|+.|.+.|+++||+|+|+++|+++|+++.+||++
T Consensus 425 ~~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~ 504 (1452)
T PTZ00297 425 GVRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACAL 504 (1452)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3458999999999999999999742 2 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCC-CCCcccccccCC
Q 048242 93 TGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETC-DRAPLEYALSKG 171 (430)
Q Consensus 93 ~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~ 171 (430)
+|++++|+.+ +.+++.++++.++++++|++.+....+.++.. + ..+.+|++++... ............
T Consensus 505 ~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~--~-------~Lr~IIv~d~~~~~~~~~~~~~~~i~ 573 (1452)
T PTZ00297 505 YGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS--R-------KLETVVYTHSFYDEDDHAVARDLNIT 573 (1452)
T ss_pred cCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc--c-------CCcEEEEECCCcccccccccccCCcc
Confidence 9999999975 36789999999999999998766655443211 1 4677888864210 000000001123
Q ss_pred ccchhhhhhcCCCCCC-CCCCCCCCCeeEEEe---CCCCCCCCceEEechHHHHHHHHHHHhhc---CCCCCCEEEeccC
Q 048242 172 VTEYEKLLETGDPEFA-WKPPRDEWQSIALGY---TSGTTANPKGVLVSHRAAYLMSLNVVLTW---GMKEGAVYLWTLP 244 (430)
Q Consensus 172 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~---TSGttG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~~~~p 244 (430)
..+|++++..+..... ......++|++.|+| ||||||.||||++||+|++.++....... ....+|++++.+|
T Consensus 574 ~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LP 653 (1452)
T PTZ00297 574 LIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTP 653 (1452)
T ss_pred eeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEech
Confidence 5678888876532111 112346789999985 99999999999999999999888765432 3567899999999
Q ss_pred chhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC--------------------
Q 048242 245 IFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED-------------------- 304 (430)
Q Consensus 245 l~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~-------------------- 304 (430)
++|+++....+.++..|+++.. +++..+++.|++++||+++++|.+|+.+......+
T Consensus 654 LaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~ 730 (1452)
T PTZ00297 654 FAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRS 730 (1452)
T ss_pred HHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 9999997777777888888753 47899999999999999999999999886431000
Q ss_pred ------CCC---------------CCCceeEEeecCC--CCCHHHHHHHHhcCcEEEeeecCccccccccccccCCCCCC
Q 048242 305 ------TIL---------------PLPHVVNVNTGGS--PPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWNPNWDS 361 (430)
Q Consensus 305 ------~~~---------------~l~~lr~v~~~G~--~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~ 361 (430)
... .-.++|.+++||+ +++. ....++++..+||+||+. +.+....
T Consensus 731 ~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~-----~l~~~i~i~~g~glTE~~---~~~~~~~---- 798 (1452)
T PTZ00297 731 RLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSF-----SLLEHISVCYVPCLREVF---FLPSEGV---- 798 (1452)
T ss_pred HHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccCh-----HHhCCceEEEecceEEee---eecCCCC----
Confidence 000 0257999998873 4443 333468889999999952 2222211
Q ss_pred CChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccchHhh
Q 048242 362 LPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 362 ~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
....|+|+|++ +++|.|.+..... + ..|||+++ |++||++|++.+
T Consensus 799 ---------~~~~G~Plpgv-EvKI~~~~E~~~~--~--~~GEIlvr-------~~kdpe~T~e~~ 843 (1452)
T PTZ00297 799 ---------FCVDGTPAPSL-QVDLEPFDEPSDG--A--GIGQLVLA-------KKGEPRRTLPIA 843 (1452)
T ss_pred ---------cccCCeecCce-EEEEcccccccCC--C--CCCeEEEE-------ECCChHHHHHhh
Confidence 12249999999 9999875312111 2 35999995 468999998753
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.2e-39 Score=308.06 Aligned_cols=288 Identities=15% Similarity=0.120 Sum_probs=245.7
Q ss_pred eEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcC
Q 048242 38 SVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAE 117 (430)
Q Consensus 38 a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~ 117 (430)
++++.++++||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|++|..+.+++..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46778899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCe
Q 048242 118 AALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQS 197 (430)
Q Consensus 118 ~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (430)
++++++++.... . .. .....++++
T Consensus 80 ~~~~i~~~~~~~-----------------~-------~~--------------------------------~~~~~~~~~ 103 (414)
T PRK08308 80 CHGLLYGESDFT-----------------K-------LE--------------------------------AVNYLAEEP 103 (414)
T ss_pred CCEEEecCcccc-----------------c-------cc--------------------------------CCCCCCCCc
Confidence 999998763100 0 00 012345789
Q ss_pred eEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhH-HHHHHHhhcceEEEeCCCCHHHHH
Q 048242 198 IALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWC-FTWSLAALCGTSVMLRQASAKAIY 276 (430)
Q Consensus 198 ~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~~~~~~~~ 276 (430)
++++|||||||.||+|.++|+++.+++......+....+|+++..+|++|.+|+. .++.++..|+++++.+.+++..++
T Consensus 104 ~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~ 183 (414)
T PRK08308 104 SLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFAL 183 (414)
T ss_pred eEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHH
Confidence 9999999999999999999999999888888888889999999999999999986 477788899999999889999999
Q ss_pred HHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeeecCccccccccccccC
Q 048242 277 KAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVYGLSEINGPATVCAWN 356 (430)
Q Consensus 277 ~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~ 356 (430)
+.++++++|+++++|.++..+.+.... ..+++.++.+|+++++++.+++++.+.++++.||+||++.......
T Consensus 184 ~~l~~~~~t~~~~~P~~~~~l~~~~~~-----~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-- 256 (414)
T PRK08308 184 NILRNTPQHILYAVPLMLHILGRLLPG-----TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD-- 256 (414)
T ss_pred HHHHHhCCeEEEcCHHHHHHHHhcCCc-----cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC--
Confidence 999999999999999999999876532 2368889999999999999999977789999999999975332111
Q ss_pred CCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecC
Q 048242 357 PNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN 410 (430)
Q Consensus 357 ~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~ 410 (430)
....+++|+|++++ ++++.+.+ + ++|||++++.
T Consensus 257 -----------~~~~~~~G~p~~~~-~~~~~~~~-------~--~~gel~v~~~ 289 (414)
T PRK08308 257 -----------MKSHLDLGNPLPHV-SVSAGSDE-------N--APEEIVVKMG 289 (414)
T ss_pred -----------CCCCCccCccCCCe-EEEEecCC-------C--CCceEEEEcC
Confidence 01236799999999 89887532 3 6799999865
No 119
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=7.5e-38 Score=298.99 Aligned_cols=372 Identities=16% Similarity=0.205 Sum_probs=294.6
Q ss_pred HHHHHhhC-CCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 26 LERAATVH-PTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 26 l~~~~~~~-p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
+++..+.. ++.+++++.+ ..+||.|+.+++.++|+.|.+.|+++||+|++++|+.+++++++|||.++|++.+
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~ 149 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHS 149 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEE
Confidence 44444443 7888888742 4499999999999999999988999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHH------HHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCc
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAE------EALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGV 172 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 172 (430)
++-...++.++...+...++|+|++.+......+ .....+.......+.....+.+.+.. ..
T Consensus 150 ~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------------~d 217 (626)
T KOG1175|consen 150 SVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN------------RD 217 (626)
T ss_pred EeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc------------cc
Confidence 9999999999999999999999999764322111 11111111111111112222222211 13
Q ss_pred cchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHH-HHHHHHHHHhhcCCCCCCEEEeccCchhhhhh
Q 048242 173 TEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRA-AYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGW 251 (430)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~-l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl 251 (430)
..|++.+....+... ....+.+|+.+|+|||||||.||++.+++.. +...+......+.+..+|++.+..-+.++.|-
T Consensus 218 ~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~ 296 (626)
T KOG1175|consen 218 LFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGH 296 (626)
T ss_pred ccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeecc
Confidence 456666555555443 3567889999999999999999999999886 45555566667789999999999999999887
Q ss_pred HH-HHHHHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCC--CCCCCceeEEeecCCCCCHHH
Q 048242 252 CF-TWSLAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDT--ILPLPHVVNVNTGGSPPPPPI 326 (430)
Q Consensus 252 ~~-~~~~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~--~~~l~~lr~v~~~G~~l~~~~ 326 (430)
.. .+.+++.|+++++++ ++++..+++.+.++++|++++.|+.++.+.+...... .. +++||++.++||+++++.
T Consensus 297 ~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~-~~sLk~~~S~Gepi~~~~ 375 (626)
T KOG1175|consen 297 SYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYS-LKSLRTCGSVGEPINPEA 375 (626)
T ss_pred chhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccc-cceEEEEeecCccCCcch
Confidence 75 666899999999995 4699999999999999999999999997776544433 33 478999999999999999
Q ss_pred HHHHH-hcCc-EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeE
Q 048242 327 LLAMS-QKGF-RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGE 404 (430)
Q Consensus 327 ~~~~~-~~~~-~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Ge 404 (430)
..++. .++. +|...||+||+|+.++.+....+ ..++++.|+|.+|+ .+.|+|++ |+.++.+. +.|+
T Consensus 376 ~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de~-g~~~~~~~-~~G~ 443 (626)
T KOG1175|consen 376 WEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDEN-GNELPPST-GNGE 443 (626)
T ss_pred HHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECCC-CCCcCCCC-ceeE
Confidence 99998 6677 69999999999999988876531 35679999999999 89999996 99998865 6899
Q ss_pred EEEecC---cccccccCCcccc
Q 048242 405 VVMRGN---MVMKGYLKNPKAN 423 (430)
Q Consensus 405 l~v~g~---~v~~gY~~~~~~t 423 (430)
|+++.+ +.+++||+|++.-
T Consensus 444 l~~~~~~P~~~~r~~~~n~erf 465 (626)
T KOG1175|consen 444 LRLKPPWPPGMFRTLWGNHERF 465 (626)
T ss_pred EEEeCCCCccccccccCCHHHh
Confidence 999984 7799999999943
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.7e-35 Score=296.51 Aligned_cols=361 Identities=21% Similarity=0.274 Sum_probs=296.8
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..++...|...+...|++.|+.+.+.++||+|+..+++++|+.|.+.|+++++.|+++.+.+.++++.++|++++|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 36799999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++|.++.+++.++++..+++.+++.......... ... +.++....
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~------------------- 351 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG--------------LPG-LALDDALS------------------- 351 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEecccccccccc--------------CCc-cccccccc-------------------
Confidence 99999999999999999999999998332110000 000 11111100
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLA 258 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l 258 (430)
......+. .....+++.++++|||||||+||||+.+|+++.+.+.+....+.++.+|+++...++.+.......+.++
T Consensus 352 -~~~~~~~~-~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l 429 (642)
T COG1020 352 -EIPDTDPI-PQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGAL 429 (642)
T ss_pred -cCCccCcc-cccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHH
Confidence 00000000 1234568999999999999999999999999999888888889999999999999998888888999999
Q ss_pred hhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCC-CCCceeEEeecCCCCCHHHHHHHHhc-
Q 048242 259 ALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTIL-PLPHVVNVNTGGSPPPPPILLAMSQK- 333 (430)
Q Consensus 259 ~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~l~~lr~v~~~G~~l~~~~~~~~~~~- 333 (430)
..|+++++.+. .++..+.+.+.++++|++..+|.++..+.......... ....+|.+++||+.++..+.+++...
T Consensus 430 ~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~ 509 (642)
T COG1020 430 LEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLA 509 (642)
T ss_pred hCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhc
Confidence 99999999863 68899999999999999999999999999872221111 03459999999999999999988743
Q ss_pred --CcEEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCc
Q 048242 334 --GFRVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNM 411 (430)
Q Consensus 334 --~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~ 411 (430)
...+.+.||+||+...+........ .. . ..++|+|+++. .+.|+|.. +++++.+ ..||+++.|.+
T Consensus 510 ~~~~~l~~~ygpTe~~~~~~~~~~~~~-------~~-~-~~piG~p~~n~-~~~ild~~-~~~~p~g--v~gel~i~g~~ 576 (642)
T COG1020 510 ALARRLLNLYGPTEATLDAPSFPISAE-------LE-S-RVPIGRPVANT-QLYILDQG-LRPLPLG--VPGELYIAGLG 576 (642)
T ss_pred cccceEeeccCccHHhhheeeEEcccc-------cC-C-CCCcceeeCCC-eEEEECCC-CCcCCCC--CCeeeEECCcc
Confidence 4689999999997655554433211 00 0 46899999998 89999955 9999999 89999999999
Q ss_pred ccccccCCcccchHhhh
Q 048242 412 VMKGYLKNPKANEEAFA 428 (430)
Q Consensus 412 v~~gY~~~~~~t~~~f~ 428 (430)
+.+||++++++|.++|.
T Consensus 577 ~a~gy~~~p~lt~~~f~ 593 (642)
T COG1020 577 LALGYLNRPDLTAERFI 593 (642)
T ss_pred hhhhhcCChhhhHHHhh
Confidence 99999999999999993
No 121
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=8.5e-28 Score=209.74 Aligned_cols=218 Identities=15% Similarity=0.126 Sum_probs=164.2
Q ss_pred HHHHHhhCCCcceEEEC-C-----eeeeHHHHHHHHHHHHHHHHH-cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 26 LERAATVHPTRKSVVYE-S-----KHYTWQQTYQRCRRLASALSQ-LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 26 l~~~~~~~p~~~a~~~~-~-----~~~Ty~el~~~~~~la~~L~~-~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
+...++.+|+++|+++. + .++||+|+.++++++|+.|.+ .|+++||+|+|+++|+++++++++|++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 46778889999999853 2 369999999999999999998 7999999999999999999999999999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccccCCccchhhh
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYALSKGVTEYEKL 178 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (430)
|++ .+++++++++.+....+.. . ..++.+.+......... ....+..+|.+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~-------------~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 133 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAG-------------S-GEVVALSLDPLGRRVAG-ELPPGVIDFAPE 133 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhccc-------------C-CceEEEeccccccCCCC-CCCCcccchhhh
Confidence 995 6789999998876554320 1 22333321100000000 011233456665
Q ss_pred hhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhH-HHHHH
Q 048242 179 LETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWC-FTWSL 257 (430)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~-~~~~~ 257 (430)
+..............++|++.|+||||+ +|.+++... ...+++.+|+++ .+|++|.+|+. .++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~ 199 (227)
T TIGR03089 134 VRVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAP 199 (227)
T ss_pred hhccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHH
Confidence 5433222222113456899999999975 666665544 456788999999 99999999997 57788
Q ss_pred HhhcceEEEeCCCCHHHHHHHHHhhCce
Q 048242 258 AALCGTSVMLRQASAKAIYKAIAEHGVT 285 (430)
Q Consensus 258 l~~g~~~v~~~~~~~~~~~~~l~~~~vt 285 (430)
+..|+++++.++|++..+++.|+++|||
T Consensus 200 l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 200 LAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred hccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 8999999999999999999999999987
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.94 E-value=2.2e-25 Score=210.53 Aligned_cols=192 Identities=25% Similarity=0.327 Sum_probs=161.0
Q ss_pred CCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe---C
Q 048242 192 RDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML---R 268 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~---~ 268 (430)
..++++++++|||||||.||+|+++|.++..........+ ...++++..+|++|.+++...+.++..|++.++. .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 3467999999999999999999999999988777655543 3567899999999999998888888899998873 4
Q ss_pred CCCHHHHHHHHHhhC--ceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeeecCccc
Q 048242 269 QASAKAIYKAIAEHG--VTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVYGLSEI 346 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~--vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~YG~tE~ 346 (430)
.+++..+++.+++++ .++...+|.++..+....... .+ ++++|.+++||+++++++.++++++++++++.||+||+
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~-~~-~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~ 187 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAAT-AA-LAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSET 187 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcccc-CC-cccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCcc
Confidence 578999999999998 566677898888877654432 33 88999999999999999999999889999999999998
Q ss_pred cccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccCCcccc
Q 048242 347 NGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLKNPKAN 423 (430)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~~~~~t 423 (430)
++.+. ..|+|++++ +++|. + |||+++|+.++.||+++++.+
T Consensus 188 ~~~~~---------------------~~G~~~~g~-~v~i~--~------------Gei~v~g~~~~~gY~~~~~~~ 228 (358)
T PRK07824 188 SGGCV---------------------YDGVPLDGV-RVRVE--D------------GRIALGGPTLAKGYRNPVDPD 228 (358)
T ss_pred CCCcC---------------------cCceeCCCC-EEEec--C------------CEEEEecCccccccCCCcccc
Confidence 65432 248899999 88882 1 899999999999999988754
No 123
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.92 E-value=4.6e-23 Score=201.68 Aligned_cols=379 Identities=14% Similarity=0.123 Sum_probs=266.2
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHHHHHHHhh
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMYEVHFGVP 91 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~ 91 (430)
..++.++|++.++++|+.+|+..-+ .++||++|..++.+++..|... -+++||.|++++++++|++++++||+
T Consensus 769 l~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cl 848 (1363)
T KOG3628|consen 769 LLTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACL 848 (1363)
T ss_pred HHHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHH
Confidence 3789999999999999999999743 7899999999999999999965 78999999999999999999999999
Q ss_pred hcCCeeeeccccCC------hhhHHHHHhhcCceEEEeccccHHHHHH--HHHHhhccCCCCCCCCeEEEecCCCCCCCc
Q 048242 92 MTGAVLNCINFRLN------PLNVAIILGHAEAALVFVDQQYFALAEE--ALKIMEGKSEGLFKPPVLIVIGDETCDRAP 163 (430)
Q Consensus 92 ~~G~~~~~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 163 (430)
.+|.+++|+.|... ...+..+++..+++.|+++......++. +.....+ ...+.++.+++...
T Consensus 849 y~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~-----s~~p~i~~~~~~~~---- 919 (1363)
T KOG3628|consen 849 YLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQ-----SAIPLILVLPKLPE---- 919 (1363)
T ss_pred hcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhh-----hcchhhhcccccch----
Confidence 99999999988443 3568889999999999999876554432 2222111 12223333333210
Q ss_pred ccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEecc
Q 048242 164 LEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTL 243 (430)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 243 (430)
..........+... ...+-...++.+|++-+.--++|.--++.++|..+++.+...+....+.+..-++.+.
T Consensus 920 ------t~~k~~~~~~k~~~--~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~ 991 (1363)
T KOG3628|consen 920 ------TIRKRKKNIKKLNT--PTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCS 991 (1363)
T ss_pred ------hhhhhhhhhhccCC--CCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEe
Confidence 00011111111111 1111234567899999999999999999999999999999999999888888777777
Q ss_pred CchhhhhhH-HHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCce------
Q 048242 244 PIFHGNGWC-FTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHV------ 312 (430)
Q Consensus 244 pl~h~~gl~-~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~l------ 312 (430)
+.+...|+. ..+...+.|...+++++ .++..+++.|++|+|.-++.+=..+..+.+.......+ ++..
T Consensus 992 ~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~en-l~~~gnn~s~ 1070 (1363)
T KOG3628|consen 992 SPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVEN-LSKRGNNTSS 1070 (1363)
T ss_pred cCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccch-hhhhhccccc
Confidence 776666666 46666788998888864 58999999999999999999999898888765544333 3211
Q ss_pred eEEeecCCCCCHHHHHHHHh----cCcE---EEeeecCccccccccccccCCCCCCCChhhh----------------hh
Q 048242 313 VNVNTGGSPPPPPILLAMSQ----KGFR---VTHVYGLSEINGPATVCAWNPNWDSLPFEAQ----------------AR 369 (430)
Q Consensus 313 r~v~~~G~~l~~~~~~~~~~----~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~----------------~~ 369 (430)
.+++..-+.....+.+-+.+ .|.. +...|+.---..++.....+.+.-....+.. ..
T Consensus 1071 s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l 1150 (1363)
T KOG3628|consen 1071 SIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSL 1150 (1363)
T ss_pred ceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcc
Confidence 34444455555555554442 2322 4455655443333333222221111001110 11
Q ss_pred hccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEecCcccccccC
Q 048242 370 LNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRGNMVMKGYLK 418 (430)
Q Consensus 370 ~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~~v~~gY~~ 418 (430)
.....|+..+++ ++.|++||+..+|.+| +.||||++|.+-+.+|+.
T Consensus 1151 ~L~dSG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~ 1196 (1363)
T KOG3628|consen 1151 LLYDSGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFT 1196 (1363)
T ss_pred ccccCCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccc
Confidence 112248888998 9999999999999999 999999999999998875
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.89 E-value=8.1e-22 Score=190.10 Aligned_cols=200 Identities=18% Similarity=0.185 Sum_probs=150.5
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHH---HHHhhcCCCCCCEEEeccCchhh-hhhHHHHHHHhhcceEEEeC
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSL---NVVLTWGMKEGAVYLWTLPIFHG-NGWCFTWSLAALCGTSVMLR 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~---~~~~~~~~~~~~~~~~~~pl~h~-~gl~~~~~~l~~g~~~v~~~ 268 (430)
+.++++.+++||||||.||++.++|.++..... .....+++..+|++++..+..+. .++...+.+...|++++...
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 456788899999999999999999998855432 23344678889998887665433 33334455667788988887
Q ss_pred CCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCC-CCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccc
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTIL-PLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEI 346 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~ 346 (430)
..++..+++.|+++++|+++++|+++..|.+.......+ ...+||.++++|+++++++.+.++ .+|+++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 778899999999999999999999999988654332221 035899999999999999999998 679999999999998
Q ss_pred ccc-ccccccCCCCCCCChhhhhhhccccCCcc--ccccceEEeeCCCCCCCCCCCCceeEEEEecC
Q 048242 347 NGP-ATVCAWNPNWDSLPFEAQARLNARQGVKC--MCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN 410 (430)
Q Consensus 347 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~vG~~~--~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~ 410 (430)
++. +...+.. ...|.++ +.+ .++|+|++++++++.| +.|||++++.
T Consensus 233 ~~~~~~~~~~~---------------~~~g~~~~~~~~-~~eivd~~~g~~v~~G--e~Gelvvt~~ 281 (422)
T TIGR02155 233 IGPGVAMECVE---------------TQDGLHIWEDHF-YPEIIDPHTGEVLPDG--EEGELVFTTL 281 (422)
T ss_pred cCCceeecccc---------------cCCCceEecCee-EEEEECCCCCCCCCCC--CeeEEEEecC
Confidence 532 2221100 0113333 245 6789998779999988 8999999984
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.87 E-value=2.5e-21 Score=182.43 Aligned_cols=148 Identities=21% Similarity=0.228 Sum_probs=124.1
Q ss_pred CeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCC--CCEEEeccCchhhhhhH-HHHHHHhhcceEEEeCCCCH
Q 048242 196 QSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKE--GAVYLWTLPIFHGNGWC-FTWSLAALCGTSVMLRQASA 272 (430)
Q Consensus 196 ~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~~~~~~~ 272 (430)
..++++|||||||.||+|+++|+++.+.+......+++.. .+++++.+|++|.+|+. ..+.++..|+++++...+++
T Consensus 96 ~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~ 175 (386)
T TIGR02372 96 TARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPA 175 (386)
T ss_pred CceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCCh
Confidence 4678999999999999999999999988887777777643 46799999999999976 46667788999999888888
Q ss_pred HHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCc-EEEeeecCcccccccc
Q 048242 273 KAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGF-RVTHVYGLSEINGPAT 351 (430)
Q Consensus 273 ~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~-~v~~~YG~tE~~~~~~ 351 (430)
..+++.++.+ |+++++|.+++.+.+.. .+ ++++|. +++|+++++++.+.+++++. .+++.||+||+++++.
T Consensus 176 ~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~-l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~ 247 (386)
T TIGR02372 176 SGIMRHARPG--DLIVGTPFIWEQLADLD----YR-LPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGL 247 (386)
T ss_pred HHHHHhhccC--CEEEECcHHHHHHHhhC----cC-CCccee-EecCCCCCHHHHHHHHHhcccchhheecccccccccc
Confidence 8888887654 89999999999998753 23 677886 67899999999999987764 6999999999987554
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.86 E-value=1.2e-20 Score=182.15 Aligned_cols=196 Identities=16% Similarity=0.127 Sum_probs=146.9
Q ss_pred CCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEe
Q 048242 192 RDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVML 267 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~ 267 (430)
.+.++++.+.+||||||.||+|.+||+++......... ..+++.+|+++...+..+..+... .+.+...|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 34568889999999999999999999998665544333 347889999999988876655543 44456677776543
Q ss_pred CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCC-CCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCcc
Q 048242 268 RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTIL-PLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSE 345 (430)
Q Consensus 268 ~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE 345 (430)
.. ....++.|.++++|.+.++|+.+..+.........+ ...+||.+++||+++++++.+.++ .+|+++++.||+||
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE 240 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTE 240 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhh
Confidence 32 345689999999999999999888776543322211 046899999999999999999998 56999999999999
Q ss_pred ccccccccccCCCCCCCChhhhhhhccccCCcc--ccccceEEeeCCCCCCCCCCCCceeEEEEecC
Q 048242 346 INGPATVCAWNPNWDSLPFEAQARLNARQGVKC--MCLEGLDVLDTKTNQPIPADGKTIGEVVMRGN 410 (430)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~--~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g~ 410 (430)
++ .+..|.. ..|..+ +.+ .++|+|++++.++++| +.|||++++-
T Consensus 241 ~~-~~~~c~~-----------------~~g~h~~~d~~-~vEIvDp~~~~~vp~G--e~GELvvT~L 286 (445)
T TIGR03335 241 GT-MCGECQA-----------------VAGLHVPEDLV-HLDVYDPRHQRFLPDG--ECGRIVLTTL 286 (445)
T ss_pred hh-heEEecC-----------------CCCccccCCce-EEEEEcCCCCCCCcCC--CceEEEEEec
Confidence 85 3222211 113333 345 6899999988889988 8999999975
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.73 E-value=1.8e-16 Score=146.24 Aligned_cols=199 Identities=15% Similarity=0.185 Sum_probs=152.6
Q ss_pred CCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCc-hhhhhhHHHHHHHhhcceEEEe
Q 048242 192 RDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPI-FHGNGWCFTWSLAALCGTSVML 267 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl-~h~~gl~~~~~~l~~g~~~v~~ 267 (430)
.+.+++..|-.||||||+|+-+..++..+......+.. ..+...+|++..+... .+..|+..-+.+-..|++++-.
T Consensus 87 ~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~ 166 (438)
T COG1541 87 VPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPI 166 (438)
T ss_pred ccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEcc
Confidence 44566676888999999999999999987555444433 3477888987776663 2334445555555567777766
Q ss_pred CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCC--CCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCc
Q 048242 268 RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDT--ILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLS 344 (430)
Q Consensus 268 ~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~--~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~t 344 (430)
..-+...-++.+.++++|++.++|+.+..+.+...... .+ -.+||.+++|+|+++++.++.+. .+|+.+++.||+|
T Consensus 167 ~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~-~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGlt 245 (438)
T COG1541 167 SGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPD-KLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLT 245 (438)
T ss_pred CCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChh-hcceeEEEEecccCCHHHHHHHHHHhCCceeeccccc
Confidence 66678899999999999999999999999998765553 22 46999999999999999999999 7899999999999
Q ss_pred cccccc-cccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCceeEEEEec
Q 048242 345 EINGPA-TVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKTIGEVVMRG 409 (430)
Q Consensus 345 E~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~~Gel~v~g 409 (430)
|..++. ..|... ......-+.. .++|+||++++.+++| +.|||.++.
T Consensus 246 E~~g~g~~eC~~~---------------~glhi~eD~~-~~Ei~dP~t~e~l~dg--e~GelV~T~ 293 (438)
T COG1541 246 EGFGPGAGECTER---------------NGLHIWEDHF-IFEIVDPETGEQLPDG--ERGELVITT 293 (438)
T ss_pred cccCCcccccccc---------------cCCCcchhhc-eeeeecCCcCccCCCC--CeeEEEEEe
Confidence 997663 333221 1122344445 6899999999999999 889999886
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.71 E-value=4e-16 Score=153.72 Aligned_cols=391 Identities=14% Similarity=0.023 Sum_probs=262.2
Q ss_pred CCCcCCCCCCCCCCCCHHHHHHHHHhhCCCcceEEECC-----eeeeHHHHHHHHHHHHH-HHHHcCCCCCCeEEEEcCC
Q 048242 6 DIDDLPKNPANFTALTPLWFLERAATVHPTRKSVVYES-----KHYTWQQTYQRCRRLAS-ALSQLSIGPGTAVSVLSPN 79 (430)
Q Consensus 6 ~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~-----~~~Ty~el~~~~~~la~-~L~~~gv~~g~~V~i~~~n 79 (430)
..+..++....+....+..+++....+++..+|.+.-+ ..+||..+..++.++|+ .|.+.|+.++|+|.++...
T Consensus 80 ~~~~~ntsss~~a~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~ 159 (1363)
T KOG3628|consen 80 INDPRNTSSSMMALTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRK 159 (1363)
T ss_pred cCCCCCCchhhhhhcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEh
Confidence 34556666666777778899988888888889988744 78999999999999999 6667799999999999765
Q ss_pred c--hhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCC
Q 048242 80 V--PAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDE 157 (430)
Q Consensus 80 ~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (430)
+ .++++..++|...|.+++|+.+..+.+++..+++....+++++.......+....... +....+
T Consensus 160 ~e~ie~~isl~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~--------s~~k~v----- 226 (1363)
T KOG3628|consen 160 CEAIEFLISLFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPV--------SLAKAV----- 226 (1363)
T ss_pred hhhhHHhhhhccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcc--------cHHHHH-----
Confidence 4 7999999999999999999999999999999999999999999876554333211000 000000
Q ss_pred CCCCCcccccccCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHH---------
Q 048242 158 TCDRAPLEYALSKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVV--------- 228 (430)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~--------- 228 (430)
.++-..++-.....+....++..-. ..+|-||++++|.--|++.+|+ +..+.+.+.
T Consensus 227 -------------~~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~ 291 (1363)
T KOG3628|consen 227 -------------AWWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPAR 291 (1363)
T ss_pred -------------HhhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHH
Confidence 0000000000001111111222222 8899999999999999999987 433322221
Q ss_pred -----------hhcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHH
Q 048242 229 -----------LTWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIV 293 (430)
Q Consensus 229 -----------~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~ 293 (430)
..+++..++.++.........||.. .+.++++|.+.+.+++ +.+-.+.+.+-+++.+++..--..
T Consensus 292 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~ 371 (1363)
T KOG3628|consen 292 FAAAFYGCLHAHVFPVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAG 371 (1363)
T ss_pred HHHhhhcchhhhccccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccc
Confidence 1223455666666666666677764 7778889999999986 678889999999999999876555
Q ss_pred HHHHHcCCCC-----------CCCCCCCceeEEeecCCCCCHHHHHHHH-----hcCc------------------EEEe
Q 048242 294 LNSIVNAPPE-----------DTILPLPHVVNVNTGGSPPPPPILLAMS-----QKGF------------------RVTH 339 (430)
Q Consensus 294 l~~l~~~~~~-----------~~~~~l~~lr~v~~~G~~l~~~~~~~~~-----~~~~------------------~v~~ 339 (430)
|.+....... +..+ +++||.+++....+..+...... .+|. -...
T Consensus 372 Lkq~~~ny~~~p~a~~s~~k~~t~d-~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is 450 (1363)
T KOG3628|consen 372 LKQPVYNYQEDPKATLSFKKYKTPD-LSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPIS 450 (1363)
T ss_pred cCcccccccCCcccccchhhccCCC-ccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEE
Confidence 5555433211 1133 88999999988888876544332 2221 1112
Q ss_pred eecCccccccccccccCC---CC------------C--CCChhhhh--hhccccCCccccccceEEeeCCCCCCCCCCCC
Q 048242 340 VYGLSEINGPATVCAWNP---NW------------D--SLPFEAQA--RLNARQGVKCMCLEGLDVLDTKTNQPIPADGK 400 (430)
Q Consensus 340 ~YG~tE~~~~~~~~~~~~---~~------------~--~~~~~~~~--~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~ 400 (430)
.=+++|.+.......... .. . +...+... .....+|+..++-..+.|+++++.++|..+
T Consensus 451 ~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~-- 528 (1363)
T KOG3628|consen 451 FKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD-- 528 (1363)
T ss_pred eccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--
Confidence 222244432222211100 00 0 00001111 112236777777667889999999999999
Q ss_pred ceeEEEEecCcccccccCCcccchHhh
Q 048242 401 TIGEVVMRGNMVMKGYLKNPKANEEAF 427 (430)
Q Consensus 401 ~~Gel~v~g~~v~~gY~~~~~~t~~~f 427 (430)
++|||||.++++..+||.-+.+|...|
T Consensus 529 eVGEIwVsS~~~~~~~~al~~~t~~~F 555 (1363)
T KOG3628|consen 529 EVGEIWVSSNSLGKLFYALDKQTENTF 555 (1363)
T ss_pred cceeEEEecCCcccceeeccccccceE
Confidence 999999999999999999988887776
No 129
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.69 E-value=3.7e-16 Score=158.07 Aligned_cols=307 Identities=15% Similarity=0.082 Sum_probs=204.8
Q ss_pred CHHHHHHHHHhhCCCcceEEECC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhh
Q 048242 21 TPLWFLERAATVHPTRKSVVYES--------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPM 92 (430)
Q Consensus 21 t~~~~l~~~~~~~p~~~a~~~~~--------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~ 92 (430)
++.+.+.+.+...|.+++..+-. .++||++....++.+++.|...|.-.|+.|++++..+.++++..+++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 45556778888888888877521 7899999999999999999999999999999999999999999999999
Q ss_pred cCCeeeeccccCC----hhhHHHHHhhcCceEEEeccccHHHHHHHHHHhhccCCCCCCCCeEEEecCCCCCCCcccccc
Q 048242 93 TGAVLNCINFRLN----PLNVAIILGHAEAALVFVDQQYFALAEEALKIMEGKSEGLFKPPVLIVIGDETCDRAPLEYAL 168 (430)
Q Consensus 93 ~G~~~~~l~~~~~----~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 168 (430)
+|..+++++|.++ ++++..+.....- ...+.... ..+........ .....+.
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s----~~~~i~~~-l~i~~~~~~~~---~~~~sv~---------------- 172 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTS----VELEIVRR-LNIIDILLNSL---FPKLSVE---------------- 172 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhhee----ccceehhh-hhhHHHHhhcc---ccccchh----------------
Confidence 9999999999999 2221111111100 00000000 00000000000 0000000
Q ss_pred cCCccchhhhhhcCCCCCCCCCCCCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCc-hh
Q 048242 169 SKGVTEYEKLLETGDPEFAWKPPRDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPI-FH 247 (430)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl-~h 247 (430)
...-.|..+........ ..-.-+++.+.+.||||+||.||+|..+|..+.+...|....+.++..+.+-....+ +|
T Consensus 173 -~~~~~f~~~~~~~~~r~--~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~ 249 (1032)
T KOG1178|consen 173 -TIADSFQMVLHNEDTRE--IRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFD 249 (1032)
T ss_pred -hccchhhhhhccCCCcc--eeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecc
Confidence 00011111111111111 012346778999999999999999999999999999999999999888876333334 44
Q ss_pred hhhhHHHHHHHhhcceEEEeCC---CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCC-------------CCCCCCc
Q 048242 248 GNGWCFTWSLAALCGTSVMLRQ---ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPED-------------TILPLPH 311 (430)
Q Consensus 248 ~~gl~~~~~~l~~g~~~v~~~~---~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~-------------~~~~l~~ 311 (430)
..-.......+..|+.++.+.. .++..+.+.+++|+++..+.+|++.++++...... ... .+.
T Consensus 250 d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~-~~~ 328 (1032)
T KOG1178|consen 250 DTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTK-RSC 328 (1032)
T ss_pred cchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhccccccc-chh
Confidence 4444445555555665666532 34789999999999999999999988887643221 111 358
Q ss_pred eeEEeecCCCCCHHHHHHHH-hc--CcEEEeeecCccccccccccccC
Q 048242 312 VVNVNTGGSPPPPPILLAMS-QK--GFRVTHVYGLSEINGPATVCAWN 356 (430)
Q Consensus 312 lr~v~~~G~~l~~~~~~~~~-~~--~~~v~~~YG~tE~~~~~~~~~~~ 356 (430)
|+...++|++....+...+. .+ ++.... |+.++..+..++....
T Consensus 329 Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~-y~s~~~~~~~s~~~~~ 375 (1032)
T KOG1178|consen 329 LKLVVLGGEPLLVSLYTSTFDLLAEIFFGLP-YLSTDPTGLVSYDDFS 375 (1032)
T ss_pred heeeeecCCccchhhhhhhhhcccceeeeec-ccCCCCccceeHHhhC
Confidence 99999999999998888554 33 233333 9999888888776554
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.10 E-value=1.4e-09 Score=103.29 Aligned_cols=148 Identities=16% Similarity=0.068 Sum_probs=99.2
Q ss_pred eeEEEeCCCCCCCCceEEechHHHHHHHHH-HHh--hcCCCCCCEEEec--cCchhhhhhHHHHHHHhhcce-EEEeC-C
Q 048242 197 SIALGYTSGTTANPKGVLVSHRAAYLMSLN-VVL--TWGMKEGAVYLWT--LPIFHGNGWCFTWSLAALCGT-SVMLR-Q 269 (430)
Q Consensus 197 ~~~i~~TSGttG~pK~v~~t~~~l~~~~~~-~~~--~~~~~~~~~~~~~--~pl~h~~gl~~~~~~l~~g~~-~v~~~-~ 269 (430)
-..+..||||||.|-.+..+.......... ... ..++..++++... .+. +.+ ..+..... +-.++ .
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly------~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY------QSVNNRWISLDFFDLL 173 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH------HHHHhccceeeecCCC
Confidence 344667999999999999998865322221 111 1234444443333 211 211 11111111 22222 2
Q ss_pred CCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHH-hcCcEEEeeecCccccc
Q 048242 270 ASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMS-QKGFRVTHVYGLSEING 348 (430)
Q Consensus 270 ~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~-~~~~~v~~~YG~tE~~~ 348 (430)
.+.+..++.|.+++|+++.++|+.+..|.+.......+ .+++.++++||.+++...+.++ .||+++++.||+|| |.
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~--~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~ 250 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT--IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GF 250 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC--CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hh
Confidence 46789999999999999999999999999865443322 3789999999999999999998 67999999999999 55
Q ss_pred cccccc
Q 048242 349 PATVCA 354 (430)
Q Consensus 349 ~~~~~~ 354 (430)
++..|.
T Consensus 251 la~eC~ 256 (430)
T TIGR02304 251 LASTCR 256 (430)
T ss_pred eEEecC
Confidence 544443
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.47 E-value=7.2e-06 Score=76.40 Aligned_cols=196 Identities=15% Similarity=0.172 Sum_probs=112.6
Q ss_pred CCCCCeeEEEeCCCCCCCCceEEechHHHHHHHHH---HHhhcCCCC--CCEEEeccCchhh-hhhH----HHHHHHhhc
Q 048242 192 RDEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLN---VVLTWGMKE--GAVYLWTLPIFHG-NGWC----FTWSLAALC 261 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~---~~~~~~~~~--~~~~~~~~pl~h~-~gl~----~~~~~l~~g 261 (430)
.+++++..++.||||||.|--+.+.+..+...... ....+.... ...++...|-... ..+. ..+.....+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34566778899999999987677766655444322 222222222 2223333343211 1111 111122233
Q ss_pred ceEEEeC--CCCHHHHHHHH----HhhCceEEeeccHHHHHHHcCCCCCCCC-CCC-ceeEEeecC------CCCCH-HH
Q 048242 262 GTSVMLR--QASAKAIYKAI----AEHGVTNFCAAPIVLNSIVNAPPEDTIL-PLP-HVVNVNTGG------SPPPP-PI 326 (430)
Q Consensus 262 ~~~v~~~--~~~~~~~~~~l----~~~~vt~~~~~p~~l~~l~~~~~~~~~~-~l~-~lr~v~~~G------~~l~~-~~ 326 (430)
.. .... .++...++..+ .+.++..+++.|.++..++...+..... .++ ..+.+-.|| +.++. ++
T Consensus 166 ~~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 166 SR-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred ce-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 44 3333 35676666655 3566889999998777666533322221 032 344444454 45654 56
Q ss_pred HHHHH-hcCc----EEEeeecCccccccccccccCCCCCCCChhhhhhhccccCCccccccceEEeeCCCCCCCCCCCCc
Q 048242 327 LLAMS-QKGF----RVTHVYGLSEINGPATVCAWNPNWDSLPFEAQARLNARQGVKCMCLEGLDVLDTKTNQPIPADGKT 401 (430)
Q Consensus 327 ~~~~~-~~~~----~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~~v~d~~~~~~~~~~~~~ 401 (430)
.+.++ .+|+ ++++.||+||.......+.. --.++|.. +.|+|+++.++++.| +
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~------------------~~~~~p~w--V~iRDp~tl~~~~~G--e 302 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTELNSQAYECGH------------------GHFHVPPW--VIIRDPETLEPLPPG--E 302 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccccchhheeCCC------------------CcccCCCe--EEEECCCCCcCCCCC--C
Confidence 66666 4787 59999999997654443321 11244443 778899999999998 8
Q ss_pred eeEEEEecC
Q 048242 402 IGEVVMRGN 410 (430)
Q Consensus 402 ~Gel~v~g~ 410 (430)
+|-|.+=.+
T Consensus 303 ~Gli~vidl 311 (365)
T PF04443_consen 303 TGLIQVIDL 311 (365)
T ss_pred eeEEEEEcc
Confidence 999987765
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.25 E-value=0.056 Score=51.20 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=77.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
.-+|+.|+...+..+|+.|...|..+||+|..+..-+. .-+...+|+.++|+.++|+.+. .-+....+++..++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 45999999999999999999999999999888876332 2278899999999999999873 34567788999999999
Q ss_pred EeccccHHHHHHHHHHh
Q 048242 122 FVDQQYFALAEEALKIM 138 (430)
Q Consensus 122 i~~~~~~~~~~~~~~~~ 138 (430)
.+..++...+.+.....
T Consensus 187 ~~tps~~l~lae~~~~~ 203 (438)
T COG1541 187 AATPSYLLYLAEEAEEE 203 (438)
T ss_pred EEChHHHHHHHHHHHHc
Confidence 99998776655554443
No 133
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=90.73 E-value=2.3 Score=41.04 Aligned_cols=89 Identities=13% Similarity=0.108 Sum_probs=68.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|..++......++..+...|+++||++....+.+. ......++....|+.++++++.. .+.+...+++.++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 45788888777777788888889999998877665443 23334677889999999887654 5778889999999999
Q ss_pred EeccccHHHHHH
Q 048242 122 FVDQQYFALAEE 133 (430)
Q Consensus 122 i~~~~~~~~~~~ 133 (430)
+.....+..+.+
T Consensus 172 ~~~Ps~l~~L~~ 183 (422)
T TIGR02155 172 MVTPSYMLNLLE 183 (422)
T ss_pred EEcHHHHHHHHH
Confidence 998877665543
No 134
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=90.70 E-value=2.7 Score=41.04 Aligned_cols=83 Identities=7% Similarity=0.003 Sum_probs=63.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh--HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA--MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|.+++...+...+..+...|+++||++.++.+.+.. ....++++...|+.++|... ......+++..++.++
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 458999999988888888888899999999988766543 23456788999998876643 2345678899999998
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
+.......
T Consensus 181 ~~~ps~ll 188 (445)
T TIGR03335 181 VASVFKLL 188 (445)
T ss_pred EECHHHHH
Confidence 87665433
No 135
>PLN02736 long-chain acyl-CoA synthetase
Probab=82.78 E-value=30 Score=35.70 Aligned_cols=100 Identities=16% Similarity=0.086 Sum_probs=71.1
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|++.+...+..+.. ..++.++|++...++..-- .+...++++..|+..+.+ +...+.++...+++.++.+++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPE-WLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 44788888766655443 4588999999888876432 233456667788888866 457899999999999999999
Q ss_pred eccHHHHHHHcCCCCCCCCCCCceeEEeec
Q 048242 289 AAPIVLNSIVNAPPEDTILPLPHVVNVNTG 318 (430)
Q Consensus 289 ~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~ 318 (430)
..+..+..+...... ++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~~-----~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLSE-----IPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhhc-----CCCceEEEEE
Confidence 998887766553321 4556665543
No 136
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=82.59 E-value=8.3 Score=33.65 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=53.9
Q ss_pred CCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeeccccCChhhHHH
Q 048242 34 PTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCINFRLNPLNVAI 111 (430)
Q Consensus 34 p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~ 111 (430)
++.+|++....-.|.+.+...+ ...|+.++|++. .+|-.. -....+++++..|++.+.+ +.++++.+-.
T Consensus 149 ~~D~a~l~yTsg~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~ 219 (227)
T TIGR03089 149 ATAPALVAGGGEWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQ 219 (227)
T ss_pred CCcceeeeccccccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHH
Confidence 3455666555434444443322 556889999988 877654 3445789999999998887 6889999888
Q ss_pred HHhhcCc
Q 048242 112 ILGHAEA 118 (430)
Q Consensus 112 ~l~~~~~ 118 (430)
.+++.++
T Consensus 220 ~i~~~~v 226 (227)
T TIGR03089 220 IAETERV 226 (227)
T ss_pred HHHhhcC
Confidence 8888775
No 137
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=81.29 E-value=13 Score=36.64 Aligned_cols=85 Identities=13% Similarity=0.056 Sum_probs=64.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+...+ ++++++++...++-.. .+...+++++..|+.+++. +..++..+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEYL---GLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHhh---CCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 5689998877666554443 7889999888777543 3345678999999988765 56788889999999999999
Q ss_pred EeccccHHHHH
Q 048242 122 FVDQQYFALAE 132 (430)
Q Consensus 122 i~~~~~~~~~~ 132 (430)
+.....+..+.
T Consensus 260 ~~~p~~~~~l~ 270 (513)
T PRK07656 260 PGPPTMYNSLL 270 (513)
T ss_pred echHHHHHHHH
Confidence 88777655443
No 138
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=80.26 E-value=21 Score=34.16 Aligned_cols=88 Identities=13% Similarity=0.034 Sum_probs=64.5
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR- 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~- 268 (430)
.++.++++. -....+|++.+...+..+.. ..+++.++++....+.. ...+...++++..|+..+.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~-~~~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNS-IEFVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSS-HHHHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcc-ceeeeeeccccccccccccccc
Confidence 466777766 23457888888666554443 45788899888887764 333556777778898888885
Q ss_pred CCCHHHHHHHHHhhCceEEee
Q 048242 269 QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~ 289 (430)
......+...+++.++.+++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 578899999999999999996
No 139
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=78.25 E-value=32 Score=27.26 Aligned_cols=102 Identities=15% Similarity=0.106 Sum_probs=60.5
Q ss_pred CEEEeccCc-hhhhhhHHHHHHHh-hcceEEEeC-CCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCCC
Q 048242 237 AVYLWTLPI-FHGNGWCFTWSLAA-LCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTIL 307 (430)
Q Consensus 237 ~~~~~~~pl-~h~~gl~~~~~~l~-~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~~ 307 (430)
.+++.+.+- .|..|+......+. .|-.++.+. ...++++.+.+.++++..+..+-. .+..+.+..+...
T Consensus 5 ~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~-- 82 (137)
T PRK02261 5 TVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAG-- 82 (137)
T ss_pred EEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcC--
Confidence 344444554 78888876555554 455555554 467899999999999998876532 2333333322221
Q ss_pred CCCceeEEeecCCCC-----CHHHHHHHHhcCcEEEeeecCc
Q 048242 308 PLPHVVNVNTGGSPP-----PPPILLAMSQKGFRVTHVYGLS 344 (430)
Q Consensus 308 ~l~~lr~v~~~G~~l-----~~~~~~~~~~~~~~v~~~YG~t 344 (430)
++.++ +++||... +.+..+++++.|+ -..|+..
T Consensus 83 -~~~~~-i~vGG~~~~~~~~~~~~~~~l~~~G~--~~vf~~~ 120 (137)
T PRK02261 83 -LGDIL-LYVGGNLVVGKHDFEEVEKKFKEMGF--DRVFPPG 120 (137)
T ss_pred -CCCCe-EEEECCCCCCccChHHHHHHHHHcCC--CEEECcC
Confidence 34444 55556443 3456677888774 4456644
No 140
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=77.49 E-value=41 Score=32.69 Aligned_cols=93 Identities=10% Similarity=0.116 Sum_probs=71.1
Q ss_pred hCCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch----hHHHHHHHhhhcCCeee
Q 048242 32 VHPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP----AMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 32 ~~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~----~~~~~~lA~~~~G~~~~ 98 (430)
..||..+.++. +.++|.-++.+.+..++..+ |+...++ ++++|.. -.++..+|++..|++.+
T Consensus 231 ~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~---g~~e~~~--i~~~~Pl~H~~G~~~~~ma~l~~gat~V 305 (596)
T KOG1177|consen 231 LSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARA---GYNEKHR--ICIPNPLYHCFGCVLGVMAALMHGATIV 305 (596)
T ss_pred cCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHh---CcCcceE--EEecCchHHHHHHHHHHHHHHHhCcEEE
Confidence 44566555542 27899999999999888766 6655444 5556554 45777889999999999
Q ss_pred eccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 99 CINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 99 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
.-.|...+...-+.+.+.++.+++.....+.
T Consensus 306 fp~~~f~~k~alqai~~ekcT~l~gtPtM~~ 336 (596)
T KOG1177|consen 306 FPAPSFDPKDALQAISNEKCTTLYGTPTMFV 336 (596)
T ss_pred eeCCCCChHHHHHHHHhhceEEEecChHHHH
Confidence 8889999988888999999999998775443
No 141
>PRK08315 AMP-binding domain protein; Validated
Probab=77.27 E-value=25 Score=35.24 Aligned_cols=83 Identities=11% Similarity=0.119 Sum_probs=62.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCC--chhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPN--VPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+... .+++++|++....+- ...++..+++.+..|+..+......++..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 578888887665554433 488999998877665 344556678889999888856666778888999999999999
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
+.....+.
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 88776554
No 142
>PLN03052 acetate--CoA ligase; Provisional
Probab=76.10 E-value=39 Score=35.43 Aligned_cols=98 Identities=8% Similarity=0.027 Sum_probs=69.0
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-C
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-R 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~ 268 (430)
.++.+|++....+..+.+ ...+|...|...+..+.. ..+++++|++...+|.. .-.+...++++..|+..+.+ +
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~-~e~via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMN-VHAVIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCC-HHHHHHHHHHHHcCCEEEeeCC
Confidence 356677665433322222 356899988666554443 45889999999999963 33345667777788888777 4
Q ss_pred CCCHHHHHHHHHhhCceEEeeccH
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPI 292 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~ 292 (430)
.+.+..+...+.+.++.+++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 688999999999999999987654
No 143
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=75.56 E-value=39 Score=30.73 Aligned_cols=62 Identities=11% Similarity=0.051 Sum_probs=50.4
Q ss_pred HHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 63 SQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 63 ~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
.+.| +++|+ ..|=...+..-+...+.|...|.-++.+=|..-..+.+.+|+..++.+++++.
T Consensus 54 e~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3445 88998 44556666777888888888899988888877778889999999999999987
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.72 E-value=34 Score=33.80 Aligned_cols=85 Identities=11% Similarity=0.134 Sum_probs=63.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhH-HHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAM-YEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+..... ..+++++|++....+....+ +...++++..|+.++..+.. ++..+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 46899988876666555 44788999988877754322 34445588889988877654 888899999999999999
Q ss_pred eccccHHHHH
Q 048242 123 VDQQYFALAE 132 (430)
Q Consensus 123 ~~~~~~~~~~ 132 (430)
+....+..+.
T Consensus 261 ~~p~~~~~l~ 270 (521)
T PRK06187 261 AVPTIWQMLL 270 (521)
T ss_pred chHHHHHHHH
Confidence 9877665543
No 145
>PRK12583 acyl-CoA synthetase; Provisional
Probab=74.44 E-value=37 Score=34.01 Aligned_cols=83 Identities=16% Similarity=0.170 Sum_probs=61.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCC--chhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPN--VPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+...+ +++++|++....+- ....+..+++++..|+.++.......+..+...+++.++.++
T Consensus 219 v~~s~~~l~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAESL---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHHh---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 5789998876666554443 78889988777654 345566778888889888754455677888899999999999
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
+.....+.
T Consensus 296 ~~~P~~~~ 303 (558)
T PRK12583 296 YGVPTMFI 303 (558)
T ss_pred eccHHHHH
Confidence 88776543
No 146
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=73.65 E-value=38 Score=33.90 Aligned_cols=98 Identities=11% Similarity=0.103 Sum_probs=67.7
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeecc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~ 101 (430)
.++.+|++.. ...+|++.+...+..... ..++.++|++..++|-.. .+....+..+..|+.++...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLK---FFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4566777653 267899888765544332 346788898877776432 23334567778888877655
Q ss_pred ccCChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 102 FRLNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
....+..+...+++.++.++......+..+..
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 45678889999999999999988877665443
No 147
>PLN02565 cysteine synthase
Probab=72.74 E-value=59 Score=30.14 Aligned_cols=70 Identities=20% Similarity=0.152 Sum_probs=54.8
Q ss_pred HHHHHHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 57 RLASALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 57 ~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
.+-..+.+.|. .+|....+....+..-+...+++...|..+..+-|...+......++..++++++++..
T Consensus 52 ~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 52 SMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 33334445554 77865556667777778888899999999888888888889999999999999999864
No 148
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=71.77 E-value=45 Score=35.05 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=71.2
Q ss_pred EEechHHHHHHHHHHHhh------cCCCCC-----------CEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHH
Q 048242 213 VLVSHRAAYLMSLNVVLT------WGMKEG-----------AVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKA 274 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~------~~~~~~-----------~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~ 274 (430)
..+|...+...+..+... .++..+ |++...++.. .-.+...++++..|+..+.+ +.+.+++
T Consensus 90 ~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~-~ew~~~~lA~~~~Gav~Vpl~~~~~~~e 168 (746)
T PTZ00342 90 NYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNS-INWLVADLACMLSGVTTLVMHSKFSIDV 168 (746)
T ss_pred eeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCC-HHHHHHHHHHHHcCCeEEEecCCCCHHH
Confidence 457888876665544332 367766 7787777753 22344567777788888777 5689999
Q ss_pred HHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 275 IYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 275 ~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
+...|.+-++.+++..+..+..+...... ++.++.++.-+
T Consensus 169 l~~il~~s~~~~lv~~~~~~~~l~~~~~~-----~~~l~~ii~~~ 208 (746)
T PTZ00342 169 IVDILNETKLEWLCLDLDLVEGLLERKNE-----LPHLKKLIILD 208 (746)
T ss_pred HHHHHhcCCCCEEEEcHHHHHHHHHhhcc-----CCCceEEEEEC
Confidence 99999999999999988888877654322 56777766543
No 149
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=71.71 E-value=57 Score=33.59 Aligned_cols=79 Identities=11% Similarity=0.006 Sum_probs=60.5
Q ss_pred eEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEE
Q 048242 212 GVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~ 287 (430)
...+|...|...+..+.. ..+++++|++...+|..- -.+...++++..|+..+.+ +.+.+..+...|++.++.++
T Consensus 90 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~-e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 90 TIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTL-EPLIAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 357899988666554443 458999999999998743 2344567777788887777 56899999999999999999
Q ss_pred eecc
Q 048242 288 CAAP 291 (430)
Q Consensus 288 ~~~p 291 (430)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 8764
No 150
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=71.30 E-value=49 Score=34.46 Aligned_cols=101 Identities=12% Similarity=0.008 Sum_probs=72.1
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|...+...+..+.. ..++..+|++...++...- .+...++++..|+..+.+ +...++++...|.+.++.+++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE-WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 45788888766555444 4578899998888875432 234566677788888766 467899999999999999999
Q ss_pred eccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 289 AAPIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 289 ~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
.....+..+...... ++.++.++.-+
T Consensus 184 ~~~~~~~~l~~~~~~-----~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDISSQ-----LETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHhhc-----cCCceEEEEEC
Confidence 988888777654322 45666665543
No 151
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=70.57 E-value=63 Score=29.17 Aligned_cols=98 Identities=19% Similarity=0.148 Sum_probs=59.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccC----ChhhHHHHHhhcCce
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRL----NPLNVAIILGHAEAA 119 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~----~~~~l~~~l~~~~~~ 119 (430)
..+-.+-+ -|.-.||+.|.++|. .|.+++......+.. .+...|..+..++-.. ..+++..++++.+++
T Consensus 10 ~~iG~GHv-~Rcl~LA~~l~~~g~----~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d 82 (279)
T TIGR03590 10 SEIGLGHV-MRCLTLARALHAQGA----EVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFD 82 (279)
T ss_pred ccccccHH-HHHHHHHHHHHHCCC----EEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCC
Confidence 44444444 366789999977654 466665555444333 2356777766664322 245688889999999
Q ss_pred EEEeccc-cHHHHHHHHHHhhccCCCCCCCCeEEEecCC
Q 048242 120 LVFVDQQ-YFALAEEALKIMEGKSEGLFKPPVLIVIGDE 157 (430)
Q Consensus 120 ~vi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 157 (430)
++|+|.- ........... ....++.++|.
T Consensus 83 ~vV~D~y~~~~~~~~~~k~---------~~~~l~~iDD~ 112 (279)
T TIGR03590 83 ILIVDHYGLDADWEKLIKE---------FGRKILVIDDL 112 (279)
T ss_pred EEEEcCCCCCHHHHHHHHH---------hCCeEEEEecC
Confidence 9999873 22222222221 34677788875
No 152
>PRK11761 cysM cysteine synthase B; Provisional
Probab=70.51 E-value=66 Score=29.37 Aligned_cols=87 Identities=10% Similarity=0.057 Sum_probs=59.6
Q ss_pred cceEEECC--eeeeHHHHHHHHHHHHHHHHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHH
Q 048242 36 RKSVVYES--KHYTWQQTYQRCRRLASALSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAII 112 (430)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~ 112 (430)
++.+-.++ -+=|+++ +-+..+...+.+.| +++|+.| +....+..-..+.++|...|.-+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTL-IEATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 44444443 3334443 22333344444555 4677664 44666777788888999999988888887777788999
Q ss_pred HhhcCceEEEecc
Q 048242 113 LGHAEAALVFVDQ 125 (430)
Q Consensus 113 l~~~~~~~vi~~~ 125 (430)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 153
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=69.17 E-value=71 Score=27.12 Aligned_cols=89 Identities=12% Similarity=0.049 Sum_probs=54.0
Q ss_pred CEEEeccCc-hhhhhhHHHHHHHh-hcceEEEe-CCCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCCC
Q 048242 237 AVYLWTLPI-FHGNGWCFTWSLAA-LCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTIL 307 (430)
Q Consensus 237 ~~~~~~~pl-~h~~gl~~~~~~l~-~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~~ 307 (430)
.+++.+.+- .|..|....-..+. .|-.++.+ ....++.+.+.++++++..+..+-. .+..+.+..+....
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~- 164 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGY- 164 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCC-
Confidence 344455553 79888876555554 45555545 4567899999999999998876532 22333333222211
Q ss_pred CCCceeEEeecCCCCCHHHHH
Q 048242 308 PLPHVVNVNTGGSPPPPPILL 328 (430)
Q Consensus 308 ~l~~lr~v~~~G~~l~~~~~~ 328 (430)
.+.++ +++||.++++++.+
T Consensus 165 -~~~v~-i~vGG~~~~~~~~~ 183 (197)
T TIGR02370 165 -RDSVK-FMVGGAPVTQDWAD 183 (197)
T ss_pred -CCCCE-EEEEChhcCHHHHH
Confidence 12233 77888888876544
No 154
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=69.06 E-value=58 Score=30.86 Aligned_cols=98 Identities=17% Similarity=0.138 Sum_probs=71.2
Q ss_pred CCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeecccc
Q 048242 34 PTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFR 103 (430)
Q Consensus 34 p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~ 103 (430)
++.++++.. ...+|++.+...+..+.. ..+++++|++....+.... .+..+++.+..|+..+..++.
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 455666642 166888888877776665 3367788988887776544 455678888888888877665
Q ss_pred CC--hhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 104 LN--PLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 104 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
.. +..+..++++.++..++.....+..+.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~ 228 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAA 228 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHh
Confidence 54 67889999999999999988877665543
No 155
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=68.78 E-value=39 Score=32.50 Aligned_cols=82 Identities=10% Similarity=0.064 Sum_probs=61.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch-hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP-AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+..++..+ +++++|++....+-.. ..+..+++.+..|+..+..++. ..+...+++.++.++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 5789999888777666544 7899999887776532 2344578888999988877544 3788889999999999
Q ss_pred eccccHHHH
Q 048242 123 VDQQYFALA 131 (430)
Q Consensus 123 ~~~~~~~~~ 131 (430)
.....+..+
T Consensus 203 ~~P~~l~~l 211 (436)
T TIGR01923 203 LVPTQLNRL 211 (436)
T ss_pred eHHHHHHHH
Confidence 877655443
No 156
>PRK07788 acyl-CoA synthetase; Validated
Probab=68.33 E-value=69 Score=32.05 Aligned_cols=85 Identities=9% Similarity=0.006 Sum_probs=62.9
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..++..+|++...++.. ...+...++++..|+..+.++ .....++...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~-~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNH-RGFVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-HHHHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5888888666554443 34788899988877653 233445677778888888885 467889999999999999999
Q ss_pred ccHHHHHHHc
Q 048242 290 APIVLNSIVN 299 (430)
Q Consensus 290 ~p~~l~~l~~ 299 (430)
.+.....+..
T Consensus 153 ~~~~~~~~~~ 162 (549)
T PRK07788 153 DDEFTDLLSA 162 (549)
T ss_pred CchhHHHHHh
Confidence 8877666543
No 157
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=67.64 E-value=54 Score=33.02 Aligned_cols=86 Identities=10% Similarity=-0.066 Sum_probs=61.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh--HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA--MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+.... ...+++++|++....+-... ....+++.+..|+..+......++..+...+++.++.++
T Consensus 223 V~~s~~~l~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQTGK---YVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 5688888765443333 33478888876655544432 244577888899988877667788999999999999999
Q ss_pred EeccccHHHHH
Q 048242 122 FVDQQYFALAE 132 (430)
Q Consensus 122 i~~~~~~~~~~ 132 (430)
+.....+..+.
T Consensus 300 ~~~P~~~~~l~ 310 (570)
T PRK04319 300 YTAPTAIRMLM 310 (570)
T ss_pred EeCHHHHHHHH
Confidence 98887666543
No 158
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=67.35 E-value=39 Score=33.41 Aligned_cols=85 Identities=13% Similarity=0.014 Sum_probs=65.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|+..+...+......+ +++++|++...++-+.. .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 5689998887776665443 67889998888876543 355678889999988865 456788899999999999999
Q ss_pred eccccHHHHH
Q 048242 123 VDQQYFALAE 132 (430)
Q Consensus 123 ~~~~~~~~~~ 132 (430)
.....+..+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 9887665543
No 159
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=67.23 E-value=72 Score=32.60 Aligned_cols=96 Identities=13% Similarity=0.042 Sum_probs=67.3
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-C
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-R 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~ 268 (430)
.++.++++.... .+| ....+|...|...+..+.. ..+++++|++...+|..- -.+...++++..|+..+.+ +
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEeccCC
Confidence 456677664322 122 2457899988666554443 457899999999888643 3344566777788887776 4
Q ss_pred CCCHHHHHHHHHhhCceEEeeccH
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPI 292 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~ 292 (430)
.+.+..+...+++.++.++++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 688999999999999999987654
No 160
>PLN02614 long-chain acyl-CoA synthetase
Probab=67.01 E-value=1.6e+02 Score=30.53 Aligned_cols=86 Identities=14% Similarity=-0.044 Sum_probs=63.3
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+.. ..++.++|++...++...- .+...++++..|+..+.+. ...+.++...+++.++.+++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPE-WIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 35788888666554443 4578999999888886432 2335666777788877774 57889999999999999999
Q ss_pred eccHHHHHHHc
Q 048242 289 AAPIVLNSIVN 299 (430)
Q Consensus 289 ~~p~~l~~l~~ 299 (430)
.....+..+..
T Consensus 157 ~~~~~~~~~~~ 167 (666)
T PLN02614 157 VEEKKISELFK 167 (666)
T ss_pred ECHHHHHHHHH
Confidence 98877666543
No 161
>PLN02654 acetate-CoA ligase
Probab=66.87 E-value=80 Score=32.68 Aligned_cols=80 Identities=11% Similarity=0.054 Sum_probs=60.7
Q ss_pred eEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEE
Q 048242 212 GVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~ 287 (430)
...+|...|...+..+.. ..+++++|++...+|..- -.+...++++..|+..+.+ +.+....+...+++.++.++
T Consensus 118 ~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~-e~v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 118 DASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLM-ELPIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 356899998766554443 458999999999998733 2344567777788887777 46889999999999999999
Q ss_pred eeccH
Q 048242 288 CAAPI 292 (430)
Q Consensus 288 ~~~p~ 292 (430)
++...
T Consensus 197 i~~~~ 201 (666)
T PLN02654 197 ITCNA 201 (666)
T ss_pred EEcCc
Confidence 87654
No 162
>PLN03051 acyl-activating enzyme; Provisional
Probab=65.85 E-value=45 Score=32.95 Aligned_cols=85 Identities=11% Similarity=-0.046 Sum_probs=58.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+.... ...++.++|++...+|-+.. .+..+++.+..|+.++.......+..+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDGW---AHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHHH---HhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 5678877655433222 33478888987666554322 2345678889999988776545677889999999999999
Q ss_pred eccccHHHH
Q 048242 123 VDQQYFALA 131 (430)
Q Consensus 123 ~~~~~~~~~ 131 (430)
.....+..+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 887766544
No 163
>PRK08316 acyl-CoA synthetase; Validated
Probab=65.68 E-value=68 Score=31.68 Aligned_cols=85 Identities=11% Similarity=-0.027 Sum_probs=61.7
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+.. ..++..++++....+... ..+...++++..|+..+.++ ......+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSD-AYALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 56788888666554443 346788898888776533 34455677777888887775 56788899999999999999
Q ss_pred eccHHHHHHH
Q 048242 289 AAPIVLNSIV 298 (430)
Q Consensus 289 ~~p~~l~~l~ 298 (430)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 164
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=65.51 E-value=80 Score=29.92 Aligned_cols=62 Identities=18% Similarity=0.176 Sum_probs=50.4
Q ss_pred HcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 64 QLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 64 ~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
++| +++|....+....+..-+.+.++|...|.-+..+-|...+.+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 444 67775445557777788888889999999988888887888889999999999999974
No 165
>PRK09274 peptide synthase; Provisional
Probab=65.07 E-value=87 Score=31.32 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=57.1
Q ss_pred eEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEE
Q 048242 212 GVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~ 287 (430)
...+|...+...+..+.. ..+++.+|++...++... ..+...+.++..|+..+.+. .....++...+++.++..+
T Consensus 39 ~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~ 117 (552)
T PRK09274 39 YDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSL-EFFALTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAF 117 (552)
T ss_pred cCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcH-HHHHHHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEE
Confidence 336899988766554444 347889999988887543 23445667777888887775 4677888899999999988
Q ss_pred eecc
Q 048242 288 CAAP 291 (430)
Q Consensus 288 ~~~p 291 (430)
+..+
T Consensus 118 i~~~ 121 (552)
T PRK09274 118 IGIP 121 (552)
T ss_pred Eecc
Confidence 8754
No 166
>PRK07798 acyl-CoA synthetase; Validated
Probab=64.63 E-value=1.2e+02 Score=30.04 Aligned_cols=87 Identities=3% Similarity=-0.145 Sum_probs=61.2
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
-.+|...+...+..+.. ..+++.+|++...++..- -.+...+.++..|+..+..+ ......+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~-~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI-EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 36888888666554443 347888898877765422 22345566667788877775 46788999999999999999
Q ss_pred eccHHHHHHHcC
Q 048242 289 AAPIVLNSIVNA 300 (430)
Q Consensus 289 ~~p~~l~~l~~~ 300 (430)
........+...
T Consensus 106 ~~~~~~~~~~~~ 117 (533)
T PRK07798 106 YEREFAPRVAEV 117 (533)
T ss_pred EchhhHHHHHHH
Confidence 888776665543
No 167
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=64.49 E-value=85 Score=32.20 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=67.0
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR- 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~- 268 (430)
.++.+|++.... . ......+|++.|...+..+... .++..+|++...+|..- -.+...++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~--~-~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD--D-PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIP-EAAVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC--C-CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEEecCC
Confidence 356677664221 1 1135678999987666555443 47889999988887633 23445667777888887774
Q ss_pred CCCHHHHHHHHHhhCceEEeeccH
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPI 292 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~ 292 (430)
.+.+..+...+.+.++.++++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 578899999999999999987654
No 168
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=63.76 E-value=99 Score=31.85 Aligned_cols=94 Identities=9% Similarity=-0.059 Sum_probs=65.9
Q ss_pred CCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-C
Q 048242 194 EWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-Q 269 (430)
Q Consensus 194 ~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~ 269 (430)
++.++++.... .| ....+|+..|...+..+.. ..++..+|++...+|.. .-.+...++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNI-PETVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-HHHHHHHHHHHHcCcEEEeeCCC
Confidence 45666654322 22 2356899988766554443 45788999999998863 333456777778888887774 5
Q ss_pred CCHHHHHHHHHhhCceEEeeccH
Q 048242 270 ASAKAIYKAIAEHGVTNFCAAPI 292 (430)
Q Consensus 270 ~~~~~~~~~l~~~~vt~~~~~p~ 292 (430)
+.+..+...+++.++..+++...
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 78899999999999999887653
No 169
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=63.48 E-value=96 Score=32.00 Aligned_cols=78 Identities=9% Similarity=0.012 Sum_probs=59.2
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|...|...+..+.. ..+++++|++...+|..- -.+...++++..|+..+.+ +.+.+..+...+++.++.+++
T Consensus 113 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~-e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 113 APVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIP-QAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred eEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 46899888766554443 458999999999998743 3344567777788887777 467899999999999999998
Q ss_pred ecc
Q 048242 289 AAP 291 (430)
Q Consensus 289 ~~p 291 (430)
+..
T Consensus 192 ~~~ 194 (652)
T TIGR01217 192 TVD 194 (652)
T ss_pred Ecc
Confidence 754
No 170
>PLN03102 acyl-activating enzyme; Provisional
Probab=62.99 E-value=47 Score=33.62 Aligned_cols=81 Identities=6% Similarity=-0.015 Sum_probs=60.0
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...|...+..+... .++..+|++...+|..- ......++++..|+..+.+. .....++...+++.+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 58888887666655544 47889999988888532 22334666777788877774 578899999999999999998
Q ss_pred ccHHHH
Q 048242 290 APIVLN 295 (430)
Q Consensus 290 ~p~~l~ 295 (430)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765543
No 171
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=62.65 E-value=1.2e+02 Score=27.61 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=50.5
Q ss_pred HHHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc
Q 048242 61 ALSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 61 ~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
...+.| +.+|++| +....+..-..+-+++.+.|..+..+-|...+......++..++++++++...
T Consensus 47 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344555 4677765 56666677777778888899988888787766777888999999999998764
No 172
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=62.55 E-value=99 Score=31.97 Aligned_cols=86 Identities=15% Similarity=-0.000 Sum_probs=63.7
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|++.+...+..+.. ..++.++|++...++...- .+...++++..|+..+.+. .....++...+++.++.+++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 45888888766655544 3578999999888886432 2345667777888877774 57889999999999999999
Q ss_pred eccHHHHHHHc
Q 048242 289 AAPIVLNSIVN 299 (430)
Q Consensus 289 ~~p~~l~~l~~ 299 (430)
.....+..+..
T Consensus 155 ~~~~~~~~~~~ 165 (660)
T PLN02861 155 VQESKISSILS 165 (660)
T ss_pred ECHHHHHHHHH
Confidence 88776665544
No 173
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=62.48 E-value=80 Score=31.76 Aligned_cols=97 Identities=7% Similarity=0.014 Sum_probs=67.1
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch-hHHHHHHHhhhcCCeeeeccc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP-AMYEVHFGVPMTGAVLNCINF 102 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~~ 102 (430)
.++.++++.. ...+|++.+...+.... ...++.++|++..+.|-.. -.+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 3566666642 15788888765544433 2347888998877776432 2234567788889887765 5
Q ss_pred cCChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 103 RLNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 103 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
...+..+...+++.++..+......+..+..
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 6778889999999999999998876665543
No 174
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=62.47 E-value=1.4e+02 Score=28.27 Aligned_cols=64 Identities=11% Similarity=0.054 Sum_probs=50.9
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhh
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIME 139 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 139 (430)
+++.-+.....+.+|+.++|..+..+=|...+....+.++..++.+++...+ ++.++.....+.
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~-~deAk~~a~~lA 181 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGED-WDEAKAFAKRLA 181 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEeccc-HHHHHHHHHHHH
Confidence 5566667788899999999999999999999999999999999999998665 444444444433
No 175
>PRK06164 acyl-CoA synthetase; Validated
Probab=62.15 E-value=77 Score=31.58 Aligned_cols=96 Identities=16% Similarity=0.213 Sum_probs=69.4
Q ss_pred CCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch-hHHHHHHHhhhcCCeeeecccc
Q 048242 34 PTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP-AMYEVHFGVPMTGAVLNCINFR 103 (430)
Q Consensus 34 p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~~~ 103 (430)
++.++++... ..+|++.+...+..++..+ ++.+++++...+|-+. -.+..+++.+..|+.++.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 4566776521 5788888877766655555 6788998888877643 2345678888888887765 45
Q ss_pred CChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 104 LNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 104 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
..+..+...+++.++.+++.....+..+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677889999999999999988776654433
No 176
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=61.73 E-value=89 Score=30.53 Aligned_cols=85 Identities=8% Similarity=0.056 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+.... ...+++++|++...+|-... .+..+++.+..|+.++..+ ..++.++...+++.++.++.
T Consensus 159 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 4688887765443322 23588999998888775332 2344677778899877664 57788999999999999999
Q ss_pred eccccHHHHH
Q 048242 123 VDQQYFALAE 132 (430)
Q Consensus 123 ~~~~~~~~~~ 132 (430)
.....+..+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 9887666443
No 177
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=61.34 E-value=29 Score=27.51 Aligned_cols=41 Identities=7% Similarity=0.075 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCC---chhHHHHHHHhhhcCCe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPN---VPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n---~~~~~~~~lA~~~~G~~ 96 (430)
++++..|.+.|+.+++.|++++.. +.....+.+++-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999875 56666777777788855
No 178
>PLN02246 4-coumarate--CoA ligase
Probab=60.87 E-value=96 Score=30.91 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=59.8
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
-.+|+..+...+..+.. ..+++.+|++...++-. ...+...+.++..|+..+.++ .....++...+++.++..++
T Consensus 49 ~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~-~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 127 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNC-PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLII 127 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEE
Confidence 36899988766554444 34788999988887754 233445666677788877775 46788899999999999988
Q ss_pred eccHHHHHH
Q 048242 289 AAPIVLNSI 297 (430)
Q Consensus 289 ~~p~~l~~l 297 (430)
........+
T Consensus 128 ~~~~~~~~~ 136 (537)
T PLN02246 128 TQSCYVDKL 136 (537)
T ss_pred EccchHHHH
Confidence 776655433
No 179
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=60.49 E-value=45 Score=33.38 Aligned_cols=89 Identities=13% Similarity=0.031 Sum_probs=68.3
Q ss_pred eEEechHHHHHHHHHHHhhc---C--CCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCce
Q 048242 212 GVLVSHRAAYLMSLNVVLTW---G--MKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVT 285 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~~---~--~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt 285 (430)
+..+|+..+...+..+...+ + ++.+|++....|....+ ....++++..|+.+.-. +.++..++...++..++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 78999999877777666554 2 67899999999975433 23445556677776666 468999999999999999
Q ss_pred EEeeccHHHHHHHcCC
Q 048242 286 NFCAAPIVLNSIVNAP 301 (430)
Q Consensus 286 ~~~~~p~~l~~l~~~~ 301 (430)
++|.....+..+....
T Consensus 122 iif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEAT 137 (537)
T ss_pred EEEEcCchHHHHHHHH
Confidence 9999998888886554
No 180
>PRK06188 acyl-CoA synthetase; Validated
Probab=60.46 E-value=93 Score=30.85 Aligned_cols=84 Identities=8% Similarity=0.042 Sum_probs=62.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEe
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~ 123 (430)
..+|++.+...+.... ...+++.++++...+|-+..+...+++.+..|+..+..+ ...+..+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 5688888776555433 334788889988888776656566777888898887765 466788999999999999998
Q ss_pred ccccHHHH
Q 048242 124 DQQYFALA 131 (430)
Q Consensus 124 ~~~~~~~~ 131 (430)
....+..+
T Consensus 262 ~P~~l~~l 269 (524)
T PRK06188 262 VPTMIYAL 269 (524)
T ss_pred hHHHHHHH
Confidence 77665443
No 181
>PLN03013 cysteine synthase
Probab=60.46 E-value=1.3e+02 Score=29.19 Aligned_cols=66 Identities=21% Similarity=0.152 Sum_probs=53.2
Q ss_pred HHHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 61 ALSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 61 ~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
.+.+.| +++|....+....+..-+.+.++|...|..+..+-|...+.+....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344455 478865667777788888888899999998888888878888899999999999999764
No 182
>PRK08308 acyl-CoA synthetase; Validated
Probab=60.31 E-value=1.2e+02 Score=29.06 Aligned_cols=85 Identities=13% Similarity=0.133 Sum_probs=61.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+...+ ++..+|++...+|-.. .++..+++.+..|+..+... ..++..+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~~---~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEAL---NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHhh---CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 5789998887666555443 5677888777766543 34556788889999877664 4567778888999999998
Q ss_pred EeccccHHHHH
Q 048242 122 FVDQQYFALAE 132 (430)
Q Consensus 122 i~~~~~~~~~~ 132 (430)
+.....+..+.
T Consensus 195 ~~~P~~~~~l~ 205 (414)
T PRK08308 195 YAVPLMLHILG 205 (414)
T ss_pred EcCHHHHHHHH
Confidence 88776665443
No 183
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=59.90 E-value=1.3e+02 Score=30.82 Aligned_cols=94 Identities=12% Similarity=0.038 Sum_probs=65.2
Q ss_pred CCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHH---hhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CC
Q 048242 194 EWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVV---LTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQ 269 (430)
Q Consensus 194 ~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~---~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~ 269 (430)
++.++++.. +..+|. .-.+|...|...+..+. ...++..+|++...+|.. .-.+...++++..|+..+.+ +.
T Consensus 66 p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~-~e~v~~~lA~~~~Gav~vpl~~~ 141 (628)
T TIGR02316 66 GEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMI-AEAVFAMLACARIGAIHSVVFGG 141 (628)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC-HHHHHHHHHHHHhCCEEEecCCC
Confidence 456666542 222221 34689998866655443 445899999999999874 23344567777788887776 46
Q ss_pred CCHHHHHHHHHhhCceEEeecc
Q 048242 270 ASAKAIYKAIAEHGVTNFCAAP 291 (430)
Q Consensus 270 ~~~~~~~~~l~~~~vt~~~~~p 291 (430)
+....+...+.+.++.+++...
T Consensus 142 ~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 142 FASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCHHHHHHHHHhcCceEEEECC
Confidence 7889999999999999988754
No 184
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=59.41 E-value=1e+02 Score=30.88 Aligned_cols=95 Identities=8% Similarity=-0.012 Sum_probs=64.7
Q ss_pred CCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-C
Q 048242 194 EWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-Q 269 (430)
Q Consensus 194 ~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~ 269 (430)
++.++++.... +.++...+|...+...+..+.. ..+++.++++...++....+ ....+.++..|+..+.+. .
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~ 113 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPI 113 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccc
Confidence 45666654322 2233457899988666554444 34788999998888764432 445667777888887664 4
Q ss_pred CCHHHHHHHHHhhCceEEeeccH
Q 048242 270 ASAKAIYKAIAEHGVTNFCAAPI 292 (430)
Q Consensus 270 ~~~~~~~~~l~~~~vt~~~~~p~ 292 (430)
.....+...++..++..++....
T Consensus 114 ~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 114 FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cCHHHHHHHHHhcCceEEEEecc
Confidence 67888999999999998876553
No 185
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=59.29 E-value=1.5e+02 Score=28.55 Aligned_cols=69 Identities=13% Similarity=-0.036 Sum_probs=52.6
Q ss_pred HHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec--cccCChhhHHHHHhhcCceEEEecccc
Q 048242 59 ASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI--NFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 59 a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l--~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
...+.+..--+|-+|+.++.=.++..+.+..+...|+-+... ||..+.++....|.+.+..+.-...+.
T Consensus 21 ~~~~~~~~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~ 91 (406)
T TIGR00936 21 RERFSEEKPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGET 91 (406)
T ss_pred HHHHhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCC
Confidence 334443333467899999999999999999999999987666 777788888899998898877644433
No 186
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.82 E-value=98 Score=31.12 Aligned_cols=82 Identities=11% Similarity=0.008 Sum_probs=60.0
Q ss_pred EEechHHHHHHHHHHHhh----cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEE
Q 048242 213 VLVSHRAAYLMSLNVVLT----WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~ 287 (430)
..+|+..+...+..+... .++..+|++...++... ......+.++..|+..+.++ .+...++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~-~~~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVL-QYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 358999887776665543 36789999988888633 23445667777888887774 5688899999999999999
Q ss_pred eeccHHHH
Q 048242 288 CAAPIVLN 295 (430)
Q Consensus 288 ~~~p~~l~ 295 (430)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87665443
No 187
>PRK06839 acyl-CoA synthetase; Validated
Probab=58.64 E-value=1.3e+02 Score=29.49 Aligned_cols=85 Identities=11% Similarity=0.020 Sum_probs=62.1
Q ss_pred eEEechHHHHHHHHHHHhh----cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceE
Q 048242 212 GVLVSHRAAYLMSLNVVLT----WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTN 286 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~ 286 (430)
...+|+..+...+..+... .++..++++...++.... .....++++..|+..+.++ ..++..+...+++.+++.
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 3578899887766655543 467889998887776532 3445666677788887775 467888899999999999
Q ss_pred EeeccHHHHHH
Q 048242 287 FCAAPIVLNSI 297 (430)
Q Consensus 287 ~~~~p~~l~~l 297 (430)
++..+.....+
T Consensus 104 i~~~~~~~~~~ 114 (496)
T PRK06839 104 LFVEKTFQNMA 114 (496)
T ss_pred EEEcHHHHHHH
Confidence 99887766544
No 188
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=58.58 E-value=1.5e+02 Score=27.10 Aligned_cols=65 Identities=12% Similarity=0.101 Sum_probs=50.0
Q ss_pred HHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 61 ALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 61 ~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
.+.+.|. .+|+.| +....+..-..+-+++.+.|.-+..+-|...+......++..++++++++.+
T Consensus 48 ~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 48 DAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3444553 677755 5666677777888888899988888878776677788899999999999865
No 189
>PRK07529 AMP-binding domain protein; Validated
Probab=58.49 E-value=95 Score=31.85 Aligned_cols=95 Identities=9% Similarity=-0.005 Sum_probs=62.1
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-C
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-R 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~ 268 (430)
.++.++++....+.. ..+...+|+..+...+..... ..+++.+|++...+|....+ +...+.++..|. .+.+ +
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 445666665432211 124567899988666554443 45788999999999864332 334555555663 3333 4
Q ss_pred CCCHHHHHHHHHhhCceEEeec
Q 048242 269 QASAKAIYKAIAEHGVTNFCAA 290 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~ 290 (430)
...+..+...+++.++.+++..
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5788999999999999998875
No 190
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=58.17 E-value=86 Score=31.38 Aligned_cols=84 Identities=11% Similarity=-0.017 Sum_probs=63.0
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+... .++..++++....+....+ +...++++..|+..+.+. .....++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888886665555443 4788899988877764433 456777778888888775 578899999999999999998
Q ss_pred ccHHHHHHH
Q 048242 290 APIVLNSIV 298 (430)
Q Consensus 290 ~p~~l~~l~ 298 (430)
.+..+..+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766553
No 191
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=57.70 E-value=75 Score=31.71 Aligned_cols=84 Identities=8% Similarity=0.015 Sum_probs=61.3
Q ss_pred EechHHHHHHHHHHHhh---c-CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVLT---W-GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~-~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|+..+...+..+... . ++..++++...++.. ...+...++++..|+..+.++ ......+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNS-PQFVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCC-hHHHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 47888886665544332 3 788999988887753 344556777777888888775 46788999999999999999
Q ss_pred eccHHHHHHH
Q 048242 289 AAPIVLNSIV 298 (430)
Q Consensus 289 ~~p~~l~~l~ 298 (430)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877655443
No 192
>PRK05857 acyl-CoA synthetase; Validated
Probab=57.65 E-value=95 Score=31.03 Aligned_cols=80 Identities=14% Similarity=-0.027 Sum_probs=59.1
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|...+...+..+... .+++.++++...++... ..+...++++..|+..+.++ .+....+...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~-e~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGP-ETYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 458999887666655543 47888999888887643 33455677777888888775 46788889999999999888
Q ss_pred eccHH
Q 048242 289 AAPIV 293 (430)
Q Consensus 289 ~~p~~ 293 (430)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 77653
No 193
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=57.42 E-value=61 Score=27.94 Aligned_cols=96 Identities=14% Similarity=0.100 Sum_probs=59.1
Q ss_pred CCEEEeccCc-hhhhhhHHHHHHH-hhcceEEEeC-CCCHHHHHHHHHhhCceEEeeccHH------HHHHHcCCCCCCC
Q 048242 236 GAVYLWTLPI-FHGNGWCFTWSLA-ALCGTSVMLR-QASAKAIYKAIAEHGVTNFCAAPIV------LNSIVNAPPEDTI 306 (430)
Q Consensus 236 ~~~~~~~~pl-~h~~gl~~~~~~l-~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~~------l~~l~~~~~~~~~ 306 (430)
+.+++.+.+- .|..|....-..+ ..|-.++.+. ...++.+.+.+.++++.++..+-.+ ++.+.+..+...
T Consensus 89 ~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~~- 167 (213)
T cd02069 89 GKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRRG- 167 (213)
T ss_pred CeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhcC-
Confidence 3445555553 7888877554444 4566666664 5678999999999999998765332 222222222111
Q ss_pred CCCCceeEEeecCCCCCHHHHHHH---HhcCcE
Q 048242 307 LPLPHVVNVNTGGSPPPPPILLAM---SQKGFR 336 (430)
Q Consensus 307 ~~l~~lr~v~~~G~~l~~~~~~~~---~~~~~~ 336 (430)
+ .++ +++||.+++.+..+.. +..|..
T Consensus 168 --~-~~~-i~vGG~~~~~~~~~~~~~~~~~gad 196 (213)
T cd02069 168 --I-KIP-LLIGGAATSRKHTAVKIAPEYDGPV 196 (213)
T ss_pred --C-CCe-EEEEChhcCHHHHhhhhccccCCCc
Confidence 2 233 6778889999888764 344554
No 194
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=56.51 E-value=1.6e+02 Score=30.06 Aligned_cols=95 Identities=12% Similarity=0.059 Sum_probs=65.3
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-C
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-R 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~ 268 (430)
.++.++++.. +..+| ..-.+|.+.|...+..+.. ..+++++|++...+|..- -.+...++++..|+..+.+ +
T Consensus 66 ~p~~~A~~~~-~~~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIAV-STETD--EERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIA-EAAFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEEE-cCCCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCcEEEeeCC
Confidence 3456666542 22222 2346899888666554443 458899999999988633 2344567777788887776 4
Q ss_pred CCCHHHHHHHHHhhCceEEeecc
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAP 291 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p 291 (430)
.+....+...+.+.++.+++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 67889999999999999998754
No 195
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=56.43 E-value=1.7e+02 Score=28.88 Aligned_cols=82 Identities=9% Similarity=-0.049 Sum_probs=59.5
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..++..+|++....+....+ ....+.++..|+..+.+. ...+..+...+++.++..++.
T Consensus 37 ~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~ 115 (517)
T PRK08008 37 RYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVT 115 (517)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEE
Confidence 4788887666555444 35788899988887764432 335566677788777764 578899999999999999998
Q ss_pred ccHHHHH
Q 048242 290 APIVLNS 296 (430)
Q Consensus 290 ~p~~l~~ 296 (430)
.+.....
T Consensus 116 ~~~~~~~ 122 (517)
T PRK08008 116 SAQFYPM 122 (517)
T ss_pred ecchhHH
Confidence 8765543
No 196
>PRK07514 malonyl-CoA synthase; Validated
Probab=55.99 E-value=88 Score=30.74 Aligned_cols=85 Identities=9% Similarity=0.002 Sum_probs=61.3
Q ss_pred eEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEE
Q 048242 212 GVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~ 287 (430)
+..+|+..+...+..... ..++..+|++...++.. .-.+...+.++..|+..+.++ ......+...+++.+++.+
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~-~e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKS-PEALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC-HHHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 346888887655554443 45788999988887754 333445667777888887775 4678889999999999999
Q ss_pred eeccHHHHHH
Q 048242 288 CAAPIVLNSI 297 (430)
Q Consensus 288 ~~~p~~l~~l 297 (430)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887766543
No 197
>PRK07476 eutB threonine dehydratase; Provisional
Probab=55.91 E-value=1e+02 Score=28.46 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=45.9
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
+....+..-..+-++|.+.|.-+..+-|...+......++..++++++++.........
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~ 129 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDDAQAE 129 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHHHHHH
Confidence 44466777788888999999988888787777888889999999999998754433333
No 198
>PRK05850 acyl-CoA synthetase; Validated
Probab=55.87 E-value=1.8e+02 Score=29.29 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=59.3
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC----CCHHHHHHHHHhhCce
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ----ASAKAIYKAIAEHGVT 285 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~----~~~~~~~~~l~~~~vt 285 (430)
..+|+..+...+..+... .+ ..+|++...++.. ...+...++++..|+..+.++. ....++...|++.++.
T Consensus 34 ~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~-~~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~ 111 (578)
T PRK05850 34 ETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQG-LEYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPS 111 (578)
T ss_pred eeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCc-ccHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcCCC
Confidence 568998886655544433 34 4678888888753 3334457777788888888853 3567889999999999
Q ss_pred EEeeccHHHHHH
Q 048242 286 NFCAAPIVLNSI 297 (430)
Q Consensus 286 ~~~~~p~~l~~l 297 (430)
.++..+.....+
T Consensus 112 ~il~~~~~~~~~ 123 (578)
T PRK05850 112 VVLTTSAVVDDV 123 (578)
T ss_pred EEEEcHHHHHHH
Confidence 999988766554
No 199
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=54.82 E-value=95 Score=28.59 Aligned_cols=76 Identities=14% Similarity=0.195 Sum_probs=58.4
Q ss_pred HHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHhh
Q 048242 61 ALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIME 139 (430)
Q Consensus 61 ~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~ 139 (430)
-|.+.|++||.+|+|..--+.-.+.+.+|.++ |.-+..++... ..-+..++..+++..+...+..+....+.....
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhhc
Confidence 45677999999999998888999999999876 66666676543 234667899999999988877777776666543
No 200
>PRK13388 acyl-CoA synthetase; Provisional
Probab=54.18 E-value=1.5e+02 Score=29.63 Aligned_cols=83 Identities=8% Similarity=-0.165 Sum_probs=59.3
Q ss_pred EechHHHHHHHHHHHhh---cCC-CCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVLT---WGM-KEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~-~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|+..+...+..+... .++ .+++++...++.... .....+.++..|+..+.++ ......+...+.+.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 67998887666655543 467 678888888775332 2335666777888888775 46788899999999999998
Q ss_pred eccHHHHHH
Q 048242 289 AAPIVLNSI 297 (430)
Q Consensus 289 ~~p~~l~~l 297 (430)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876655433
No 201
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=54.01 E-value=89 Score=31.48 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=61.1
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..... ..+++.+|++...++.... .+...++++..|+..+.+. ......+...+.+.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 4788888666555444 3478889999888876433 2345666777788877774 578899999999999999998
Q ss_pred ccHHHHHH
Q 048242 290 APIVLNSI 297 (430)
Q Consensus 290 ~p~~l~~l 297 (430)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 202
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=53.82 E-value=1.3e+02 Score=29.75 Aligned_cols=84 Identities=17% Similarity=0.029 Sum_probs=60.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh--HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA--MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+.... ....+++++|++...++-... +...+++.+..|+..+..++..++..+...+++.++.++
T Consensus 179 v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~ 256 (508)
T TIGR02262 179 VVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIF 256 (508)
T ss_pred EEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEE
Confidence 6688888876554322 123478999988777765543 334566778889888877766678889999999999999
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
+.....+.
T Consensus 257 ~~~P~~~~ 264 (508)
T TIGR02262 257 YGVPTLYA 264 (508)
T ss_pred ecchHHHH
Confidence 98876544
No 203
>PRK07638 acyl-CoA synthetase; Validated
Probab=53.80 E-value=99 Score=30.30 Aligned_cols=86 Identities=8% Similarity=0.016 Sum_probs=61.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|.+.+...+...+. ..+++.+|++....+-... ++...+..+..|+..+.. +..++.++...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~~---~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNVH---DFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHHH---hcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 56888887666554433 3478889988776554432 345566777889888755 567888899999999999999
Q ss_pred eccccHHHHHH
Q 048242 123 VDQQYFALAEE 133 (430)
Q Consensus 123 ~~~~~~~~~~~ 133 (430)
.....+..+..
T Consensus 237 ~~P~~~~~l~~ 247 (487)
T PRK07638 237 TVPTMLESLYK 247 (487)
T ss_pred eCcHHHHHHHh
Confidence 98877655443
No 204
>PLN00011 cysteine synthase
Probab=52.98 E-value=1.2e+02 Score=28.20 Aligned_cols=65 Identities=17% Similarity=0.078 Sum_probs=50.5
Q ss_pred HHHHcC-CCCC-CeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 61 ALSQLS-IGPG-TAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 61 ~L~~~g-v~~g-~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
...+.| +.+| +.|+ ....+..-..+-+++...|.-+..+-|...+......++..++++++++..
T Consensus 58 ~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 58 DAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 344444 6777 5544 467777788888899999998888878777778888999999999999864
No 205
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=52.74 E-value=87 Score=22.72 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHcCCC---------CCCeEEEE-cCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHh
Q 048242 51 TYQRCRRLASALSQLSIG---------PGTAVSVL-SPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILG 114 (430)
Q Consensus 51 l~~~~~~la~~L~~~gv~---------~g~~V~i~-~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~ 114 (430)
..+|..++...+.+.|.+ +=|.|.|+ .|+......+.+++...|.+-.-.-+..+.+++..+++
T Consensus 18 ~~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~k 91 (91)
T PF08734_consen 18 SPDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIVK 91 (91)
T ss_pred cHHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHhC
Confidence 345555565566555544 34677777 67777788899999999987666667788888777653
No 206
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=52.68 E-value=66 Score=30.44 Aligned_cols=64 Identities=22% Similarity=0.271 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc-----cCChhhHHHHHhhcCceEEEe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF-----RLNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~vi~ 123 (430)
..+--.|+..++++||-|.+ .+..|+.+.=++...|+.++.++- +.+++.++..+... .|.|+.
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 34444555568999996544 356788899999999999998863 45778888888775 555554
No 207
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=52.17 E-value=1.8e+02 Score=26.30 Aligned_cols=66 Identities=9% Similarity=0.061 Sum_probs=50.2
Q ss_pred HHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc
Q 048242 61 ALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 61 ~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
.+.+.|. ++|+.| +....+.....+-++|.+.|..+..+-|...+......++..++++++++...
T Consensus 43 ~a~~~g~~~~~~~v-v~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 43 DAEKRGLLKPGTTI-IEPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 3444553 355554 44677778888888999999988888787766777889999999999998764
No 208
>PRK06381 threonine synthase; Validated
Probab=52.10 E-value=84 Score=29.01 Aligned_cols=88 Identities=10% Similarity=0.050 Sum_probs=57.2
Q ss_pred cceEEECCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHH
Q 048242 36 RKSVVYESK--HYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIIL 113 (430)
Q Consensus 36 ~~a~~~~~~--~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 113 (430)
++.+-.++. +=|+++ +.+..+...+.++|. +.| +....+..-+.+-++|...|.-+..+-|...+......+
T Consensus 32 ~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l 105 (319)
T PRK06381 32 KIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEM 105 (319)
T ss_pred eEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHH
Confidence 556655543 233332 112233333445553 344 446677778888889999998888777776667777889
Q ss_pred hhcCceEEEeccccHH
Q 048242 114 GHAEAALVFVDQQYFA 129 (430)
Q Consensus 114 ~~~~~~~vi~~~~~~~ 129 (430)
+..++++++++.++.+
T Consensus 106 ~~~GA~V~~~~~~~~~ 121 (319)
T PRK06381 106 EKYGAEIIYVDGKYEE 121 (319)
T ss_pred HHcCCEEEEcCCCHHH
Confidence 9999999999876433
No 209
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=52.06 E-value=1.3e+02 Score=29.99 Aligned_cols=83 Identities=14% Similarity=0.075 Sum_probs=59.1
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+... .++..++++...++-...+ +...++++..|+..+.++ .....++...+++.++..+.
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 468999887666555443 4778899988887764422 345677777888877664 45778899999999999988
Q ss_pred eccHHHHH
Q 048242 289 AAPIVLNS 296 (430)
Q Consensus 289 ~~p~~l~~ 296 (430)
..+..+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 76655443
No 210
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=51.60 E-value=1.1e+02 Score=30.81 Aligned_cols=81 Identities=11% Similarity=0.044 Sum_probs=59.4
Q ss_pred EechHHHHHHHHHHHh----hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVL----TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~----~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|+..+...+..+.. ..+++.++++...++.... .+...+.++..|+..+.++ .+...++...+.+.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ-YPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH-HHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 5788888666555543 3578899998888776432 2345677777888888774 57788999999999999999
Q ss_pred eccHHHH
Q 048242 289 AAPIVLN 295 (430)
Q Consensus 289 ~~p~~l~ 295 (430)
.......
T Consensus 129 ~~~~~~~ 135 (560)
T PRK08751 129 VIDNFGT 135 (560)
T ss_pred EcchhHH
Confidence 8765543
No 211
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=51.57 E-value=1.5e+02 Score=25.16 Aligned_cols=88 Identities=19% Similarity=0.236 Sum_probs=52.5
Q ss_pred CCEEEeccCc-hhhhhhHHHHHHHh-hcceEEEe-CCCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCC
Q 048242 236 GAVYLWTLPI-FHGNGWCFTWSLAA-LCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTI 306 (430)
Q Consensus 236 ~~~~~~~~pl-~h~~gl~~~~~~l~-~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~ 306 (430)
..+++.+.+- .|..|....-..+. .|-.++.+ ....++.+.+.+.++++.++..+-. .+..+.+..+....
T Consensus 83 ~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~ 162 (201)
T cd02070 83 GKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGL 162 (201)
T ss_pred CeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCC
Confidence 3445555553 78888876555553 56666545 4567899999999999998865432 22222222222111
Q ss_pred CCCCceeEEeecCCCCCHHH
Q 048242 307 LPLPHVVNVNTGGSPPPPPI 326 (430)
Q Consensus 307 ~~l~~lr~v~~~G~~l~~~~ 326 (430)
...+ .+++||.+++.+.
T Consensus 163 --~~~~-~i~vGG~~~~~~~ 179 (201)
T cd02070 163 --RDKV-KVMVGGAPVNQEF 179 (201)
T ss_pred --CcCC-eEEEECCcCCHHH
Confidence 1123 3677888888764
No 212
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=51.09 E-value=75 Score=29.56 Aligned_cols=61 Identities=20% Similarity=0.179 Sum_probs=47.6
Q ss_pred HHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 61 ALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 61 ~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
.|+..+++||++|+|..--+.-.+.+++|-.+- +-++-++.+ ++-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~---~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRS---EEKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCC---hHHHHHHHHhCCcEEEEcC
Confidence 345578999999999988799999999887554 777777644 4445678889999999865
No 213
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.73 E-value=1.3e+02 Score=29.51 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=60.6
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
-.+|...+...+..... ..+++.++++....+.. ...+...+.++..|+..+.++ .+....+...+++.++..++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~-~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENN-PEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCC-HHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 35777777555444443 45788999988887764 334556777778888888775 46788889999999999998
Q ss_pred eccHHHHHH
Q 048242 289 AAPIVLNSI 297 (430)
Q Consensus 289 ~~p~~l~~l 297 (430)
..+.....+
T Consensus 89 ~~~~~~~~~ 97 (502)
T PRK08276 89 VSAALADTA 97 (502)
T ss_pred EccchhhHH
Confidence 877665544
No 214
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=50.66 E-value=29 Score=31.41 Aligned_cols=53 Identities=6% Similarity=0.036 Sum_probs=43.1
Q ss_pred eeeeHHHHHHH-----HHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 44 KHYTWQQTYQR-----CRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 44 ~~~Ty~el~~~-----~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..+.|.++.+. ...+...|.+.|+.+++.|.++|.++.....+.+++-.+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35777777642 466777788889999999999999999998889988888875
No 215
>PLN02550 threonine dehydratase
Probab=50.63 E-value=2.9e+02 Score=28.14 Aligned_cols=89 Identities=12% Similarity=0.033 Sum_probs=58.1
Q ss_pred cceEEECCeee--eHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHH
Q 048242 36 RKSVVYESKHY--TWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIIL 113 (430)
Q Consensus 36 ~~a~~~~~~~~--Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 113 (430)
++.+-.++.+- ||+. +...+++.+.-.+ ...+| + +....+.....+.++|.++|.-+..+-|...+......+
T Consensus 125 ~IylK~E~lqptGSFK~-RGA~n~I~~L~~e-~~~~G-V--V~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~ 199 (591)
T PLN02550 125 KVLLKREDLQPVFSFKL-RGAYNMMAKLPKE-QLDKG-V--ICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSV 199 (591)
T ss_pred EEEEEEcCCCCCCcHHH-HHHHHHHHHHHHh-cCCCC-E--EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 34444444333 4443 3333444432233 34555 3 445667777888889999999888888877777778889
Q ss_pred hhcCceEEEeccccHH
Q 048242 114 GHAEAALVFVDQQYFA 129 (430)
Q Consensus 114 ~~~~~~~vi~~~~~~~ 129 (430)
+..+++++++...+.+
T Consensus 200 r~~GAeVvl~g~~~de 215 (591)
T PLN02550 200 ERLGATVVLVGDSYDE 215 (591)
T ss_pred HHcCCEEEEeCCCHHH
Confidence 9999999999875444
No 216
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=50.54 E-value=1.3e+02 Score=30.10 Aligned_cols=77 Identities=13% Similarity=0.034 Sum_probs=56.1
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|...+...+..+.. ..++..+|++...+|..- -.+...+.++..|+..+.++ .+...++...+++.++.+++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWC-EFTIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 35788888666554444 357889999988877533 33445677778888877764 46788889999999998887
Q ss_pred ec
Q 048242 289 AA 290 (430)
Q Consensus 289 ~~ 290 (430)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 217
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=50.52 E-value=92 Score=28.74 Aligned_cols=62 Identities=13% Similarity=0.032 Sum_probs=47.8
Q ss_pred HcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 64 QLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 64 ~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
+.|..+++.|+. ...+..-..+.++|.+.|.-+..+-|...+......++..++++++++..
T Consensus 45 ~~g~~~~~~vv~-aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 45 KQGLNECVHVVC-SSGGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred HhhcccCCeEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 334344555544 44566777788889999999888888877888899999999999999876
No 218
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=50.45 E-value=1.7e+02 Score=29.59 Aligned_cols=88 Identities=16% Similarity=0.172 Sum_probs=61.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhH-HHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAM-YEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+..+. .....++.+++++...+|-...+ +...++.+..|+..+...+..++..+...+++.++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 5688888765443322 12234788899888777654432 344577788888877666677888999999999999999
Q ss_pred eccccHHHHH
Q 048242 123 VDQQYFALAE 132 (430)
Q Consensus 123 ~~~~~~~~~~ 132 (430)
.....+..+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8776655443
No 219
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=50.30 E-value=1.5e+02 Score=30.99 Aligned_cols=83 Identities=11% Similarity=0.075 Sum_probs=58.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCc--hhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNV--PAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+... .++.++|++...+|-. ..+...+++.+..|+..+..+.......+...+++.++..+
T Consensus 383 v~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~ 459 (718)
T PRK08043 383 VVHSHKSLLANVEQIKTI---ADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVL 459 (718)
T ss_pred EEEcHHHHHHHHHHHHHh---hCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEE
Confidence 678998887766555433 3788999888777642 34445678888899988866544445566777888999888
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
+.....+.
T Consensus 460 ~~~p~~~~ 467 (718)
T PRK08043 460 FGTSTFLG 467 (718)
T ss_pred EchHHHHH
Confidence 77665443
No 220
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=50.30 E-value=8.2 Score=38.54 Aligned_cols=31 Identities=23% Similarity=0.088 Sum_probs=24.6
Q ss_pred CCCCCeeEEEeCCCCCCC-CceEEechHHHHH
Q 048242 192 RDEWQSIALGYTSGTTAN-PKGVLVSHRAAYL 222 (430)
Q Consensus 192 ~~~~~~~~i~~TSGttG~-pK~v~~t~~~l~~ 222 (430)
..++.+.+...||||||. +|-+..|.+.+..
T Consensus 77 L~~~~~~~f~~TSGTTg~~~K~IP~T~~~l~~ 108 (528)
T PF03321_consen 77 LTPGPPIYFALTSGTTGGKSKLIPYTKEFLKE 108 (528)
T ss_dssp TSSS--SEEEEEEEEETTEEEEEEESHHHHHH
T ss_pred CCCCCCCeEEeCCCCCCCCCceeeccHHHHHH
Confidence 456678889999999999 9999999987643
No 221
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=50.06 E-value=1.1e+02 Score=30.58 Aligned_cols=82 Identities=9% Similarity=-0.006 Sum_probs=59.9
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+... .++..+|++..+++... ..+...+.++..|+..+.+. ......+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~-~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVL-QYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH-HHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 468999887665554443 47888999888877633 23445577777888888774 46788999999999999998
Q ss_pred eccHHHH
Q 048242 289 AAPIVLN 295 (430)
Q Consensus 289 ~~p~~l~ 295 (430)
.......
T Consensus 126 ~~~~~~~ 132 (557)
T PRK07059 126 VLENFAT 132 (557)
T ss_pred EchhhHH
Confidence 8765543
No 222
>PRK13391 acyl-CoA synthetase; Provisional
Probab=49.87 E-value=1.9e+02 Score=28.50 Aligned_cols=96 Identities=10% Similarity=0.041 Sum_probs=65.6
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR- 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~- 268 (430)
.++.++.+...++ -.+|...+...+..+... .++..++++...++... ..+...+.++..|+..+.++
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~-~~~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNL-RYLEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH-HHHHHHHHHHHhccEEecccc
Confidence 4556666554332 248888886665544443 46788898887777533 23445667777888888775
Q ss_pred CCCHHHHHHHHHhhCceEEeeccHHHHH
Q 048242 269 QASAKAIYKAIAEHGVTNFCAAPIVLNS 296 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~p~~l~~ 296 (430)
..+...+...+++.++..+...+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 4678889999999999999887765543
No 223
>PRK07470 acyl-CoA synthetase; Validated
Probab=49.85 E-value=1.9e+02 Score=28.74 Aligned_cols=88 Identities=14% Similarity=0.038 Sum_probs=56.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecc-ccCChhhHHHHHhhcCceEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCIN-FRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~-~~~~~~~l~~~l~~~~~~~vi 122 (430)
..+|++.+...+......+. .++.++|++..++|-+..+-...+..+..|+..+.+. ...+++.+...+++.++.+++
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 56888887543332211111 2567788888888766544333344455566655443 356788899999999999999
Q ss_pred eccccHHHHH
Q 048242 123 VDQQYFALAE 132 (430)
Q Consensus 123 ~~~~~~~~~~ 132 (430)
.....+..+.
T Consensus 260 ~~P~~~~~l~ 269 (528)
T PRK07470 260 TVPTILKMLV 269 (528)
T ss_pred chHHHHHHHH
Confidence 9887766543
No 224
>PRK13383 acyl-CoA synthetase; Provisional
Probab=49.63 E-value=1.3e+02 Score=29.90 Aligned_cols=83 Identities=13% Similarity=0.038 Sum_probs=59.6
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+.. ..++.+++++...++..- ..+...+.++..|+..+.++ ......+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4787777655554444 347888999888777432 22345666677788888775 468899999999999999998
Q ss_pred ccHHHHHH
Q 048242 290 APIVLNSI 297 (430)
Q Consensus 290 ~p~~l~~l 297 (430)
.+...+.+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87766554
No 225
>PLN02574 4-coumarate--CoA ligase-like
Probab=49.63 E-value=2e+02 Score=28.86 Aligned_cols=83 Identities=17% Similarity=0.156 Sum_probs=59.4
Q ss_pred EechHHHHHHHHHHHh---h-cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVL---T-WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~-~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|+..+...+..+.. . .+++.+|++...++... ..+...+.++..|+..+.+. .....++...+++.++..++
T Consensus 66 ~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~ 144 (560)
T PLN02574 66 SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAF 144 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEE
Confidence 4688877555443332 3 67889999988887543 33445677777888887775 46788999999999999988
Q ss_pred eccHHHHHH
Q 048242 289 AAPIVLNSI 297 (430)
Q Consensus 289 ~~p~~l~~l 297 (430)
..+..+..+
T Consensus 145 ~~~~~~~~~ 153 (560)
T PLN02574 145 TSPENVEKL 153 (560)
T ss_pred ECHHHHHHH
Confidence 877665544
No 226
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=49.49 E-value=68 Score=30.48 Aligned_cols=57 Identities=18% Similarity=0.260 Sum_probs=32.7
Q ss_pred HHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc-----CChhhHHHHHhhcCceEEEe
Q 048242 63 SQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR-----LNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 63 ~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~vi~ 123 (430)
...++++||.|++-.+ .+.....++...|+.++.++.+ ...+.+...+.. +.+.|+.
T Consensus 64 ~al~~~pGd~Viv~~~---t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip 125 (376)
T TIGR02379 64 LLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVP 125 (376)
T ss_pred HHcCCCCcCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEE
Confidence 3346778887665433 4444555666778777766532 234556655543 5566654
No 227
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=49.37 E-value=42 Score=25.38 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..+...+...|+.+++.|+++|.++.....+.+.+..+|.
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~ 103 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGY 103 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCC
Confidence 4566677788998999999999988777777777777776
No 228
>PLN02479 acetate-CoA ligase
Probab=48.21 E-value=2.2e+02 Score=28.66 Aligned_cols=81 Identities=6% Similarity=-0.000 Sum_probs=59.3
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...|...+..+... .++..+|++...++..- ..+...+.++..|+..+.++ .+...++...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 57888876665555444 47899999988888532 23345666777788877774 578889999999999999998
Q ss_pred ccHHHH
Q 048242 290 APIVLN 295 (430)
Q Consensus 290 ~p~~l~ 295 (430)
.+..+.
T Consensus 124 ~~~~~~ 129 (567)
T PLN02479 124 DQEFFT 129 (567)
T ss_pred chhhhh
Confidence 776543
No 229
>PRK10717 cysteine synthase A; Provisional
Probab=48.14 E-value=2.3e+02 Score=26.27 Aligned_cols=64 Identities=14% Similarity=0.078 Sum_probs=49.2
Q ss_pred HHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 62 LSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 62 L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
+.+.| +++|+.| +....+..-..+-++|.+.|.-+..+-|...+......++..++++++++..
T Consensus 55 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 55 AEKRGLLKPGGTI-VEGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 33444 4667654 4466777778888888999988887777777777889999999999999863
No 230
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=47.95 E-value=1.9e+02 Score=29.61 Aligned_cols=100 Identities=14% Similarity=0.187 Sum_probs=71.7
Q ss_pred hhCCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHH-HHhhhcCCeeeec
Q 048242 31 TVHPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVH-FGVPMTGAVLNCI 100 (430)
Q Consensus 31 ~~~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~~~l 100 (430)
...|+..|.+.. +.-+||+-+...+..+...+. -++++|++.-++|-.--+=-++ .++...|.+.+..
T Consensus 187 ~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~~ 264 (613)
T COG1022 187 PPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVLF 264 (613)
T ss_pred CCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEEe
Confidence 345677776653 278999999999888887775 4889999999998764333332 4455554444433
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
..++..+..-+.+.+|.+++.-...++.+...
T Consensus 265 --~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~ 296 (613)
T COG1022 265 --KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKG 296 (613)
T ss_pred --cCCHHHHHHHHHHhCCeEEeechHHHHHHHHH
Confidence 44577788899999999999988887776554
No 231
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=47.88 E-value=1.8e+02 Score=29.50 Aligned_cols=82 Identities=10% Similarity=-0.031 Sum_probs=58.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh--HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA--MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+... .++.++|++...+|-... +...+++.+..|+.++. .+...+..+...+++.++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 578999888777766554 478899998888766543 33445566667776654 456777788888899999888
Q ss_pred EeccccHH
Q 048242 122 FVDQQYFA 129 (430)
Q Consensus 122 i~~~~~~~ 129 (430)
........
T Consensus 293 ~~~p~l~~ 300 (600)
T PRK08279 293 QYIGELCR 300 (600)
T ss_pred eehHHHHH
Confidence 76555443
No 232
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=47.85 E-value=1.9e+02 Score=25.27 Aligned_cols=93 Identities=11% Similarity=-0.049 Sum_probs=57.8
Q ss_pred CcceEEECCeeeeHHHHHHHH-HHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHH
Q 048242 35 TRKSVVYESKHYTWQQTYQRC-RRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIIL 113 (430)
Q Consensus 35 ~~~a~~~~~~~~Ty~el~~~~-~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 113 (430)
.+..+-.++..-| +-+..|. .-+...+.+.|..+++.| +....+.....+.++|...|..++.+-|...+......+
T Consensus 15 ~~l~~K~e~~~pt-gS~K~R~a~~~l~~a~~~g~~~~~~v-v~~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~ 92 (244)
T cd00640 15 ANIYLKLEFLNPT-GSFKDRGALNLILLAEEEGKLPKGVI-IESTGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQM 92 (244)
T ss_pred CEEEEEecccCCc-CCcHHHHHHHHHHHHHHcCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHH
Confidence 3444444443333 2333332 222333344443234444 444556677777788888998888888877788888899
Q ss_pred hhcCceEEEeccccHH
Q 048242 114 GHAEAALVFVDQQYFA 129 (430)
Q Consensus 114 ~~~~~~~vi~~~~~~~ 129 (430)
+..+++++.++.++..
T Consensus 93 ~~~Ga~v~~~~~~~~~ 108 (244)
T cd00640 93 RALGAEVVLVPGDFDD 108 (244)
T ss_pred HHCCCEEEEECCCHHH
Confidence 9999999999877433
No 233
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=47.80 E-value=2.2e+02 Score=25.89 Aligned_cols=63 Identities=11% Similarity=0.106 Sum_probs=48.8
Q ss_pred HHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 62 LSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 62 L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
..+.| +.+|+.| +....+..-..+-++|.+.|.-+..+-|...+......++..++++++++.
T Consensus 50 a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 50 AEKRGEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHcCCCCCCCEE-EEECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 33444 4677765 446667777888888889999888888877777788899999999999976
No 234
>PRK09088 acyl-CoA synthetase; Validated
Probab=47.68 E-value=2.3e+02 Score=27.70 Aligned_cols=78 Identities=9% Similarity=-0.072 Sum_probs=56.6
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..++..++++...++.... .+...+.++..|+..+.++ ......+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~-~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVW-LVALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 5788888666554443 3467889998888776443 2345667777888887775 567888999999999999977
Q ss_pred ccH
Q 048242 290 API 292 (430)
Q Consensus 290 ~p~ 292 (430)
...
T Consensus 101 ~~~ 103 (488)
T PRK09088 101 DDA 103 (488)
T ss_pred cch
Confidence 553
No 235
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=47.36 E-value=33 Score=28.96 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=28.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVL 76 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~ 76 (430)
.-+||.++++.+.++|..+.+.|.+|.-.|+|.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 468999999999999999999999987655555
No 236
>PRK08162 acyl-CoA synthetase; Validated
Probab=47.13 E-value=1.2e+02 Score=30.16 Aligned_cols=83 Identities=10% Similarity=0.013 Sum_probs=60.9
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+... .++..+|++...++-... .+...+.++..|+..+.++ ......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 58998887666655544 478899999888876432 2334666667788777774 568899999999999999998
Q ss_pred ccHHHHHH
Q 048242 290 APIVLNSI 297 (430)
Q Consensus 290 ~p~~l~~l 297 (430)
.+..+..+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87765543
No 237
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=46.56 E-value=1.4e+02 Score=29.10 Aligned_cols=89 Identities=10% Similarity=-0.021 Sum_probs=58.7
Q ss_pred cceEEECCeeeeHHHHHHH-HHHHHHHHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHH
Q 048242 36 RKSVVYESKHYTWQQTYQR-CRRLASALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIIL 113 (430)
Q Consensus 36 ~~a~~~~~~~~Ty~el~~~-~~~la~~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 113 (430)
++.+-.++..-| +-+..| +..+-....+.|. ++|+.| +....+..-..+.++|.+.|..+..+-|...+.+....+
T Consensus 27 ~i~~K~E~~npt-GS~K~R~a~~~l~~a~~~g~~~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~ 104 (454)
T TIGR01137 27 ELLAKCEFFNPG-GSVKDRIALRMIEDAEASGRLKPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVL 104 (454)
T ss_pred eEEEEEhhcCCC-cchHHHHHHHHHHHHHHcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHH
Confidence 455554443333 222222 2233333334454 677664 445777788888889999999888888876777788899
Q ss_pred hhcCceEEEeccc
Q 048242 114 GHAEAALVFVDQQ 126 (430)
Q Consensus 114 ~~~~~~~vi~~~~ 126 (430)
+..++++++++..
T Consensus 105 ~~~GA~v~~~~~~ 117 (454)
T TIGR01137 105 KALGAEIVRTPTA 117 (454)
T ss_pred HHCCCEEEEcCCc
Confidence 9999999999753
No 238
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=46.46 E-value=2.2e+02 Score=28.32 Aligned_cols=79 Identities=13% Similarity=0.034 Sum_probs=56.7
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+.. ..+++.++++...++.. .-.+...+.++..|+..+... .....++...+++.++..++
T Consensus 52 ~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~-~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 130 (538)
T TIGR03208 52 RRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNR-WEFTALYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFV 130 (538)
T ss_pred ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC-HHHHHHHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEE
Confidence 46888888666554443 34788899988887753 333445677777888877664 46788899999999999988
Q ss_pred eccH
Q 048242 289 AAPI 292 (430)
Q Consensus 289 ~~p~ 292 (430)
..+.
T Consensus 131 ~~~~ 134 (538)
T TIGR03208 131 VPSV 134 (538)
T ss_pred Eccc
Confidence 7553
No 239
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=46.32 E-value=86 Score=29.71 Aligned_cols=55 Identities=16% Similarity=0.258 Sum_probs=34.1
Q ss_pred cCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc-----CChhhHHHHHhhcCceEEEe
Q 048242 65 LSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR-----LNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 65 ~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~vi~ 123 (430)
.++++||.|++-.+ .+.....++...|+.++.++.+ .+.+++...+.. +.++|+.
T Consensus 66 ~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~ 125 (375)
T PRK11706 66 LDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVP 125 (375)
T ss_pred hCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEE
Confidence 46788888766543 3444455667778877766532 346667776654 5666664
No 240
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=46.22 E-value=1.6e+02 Score=28.65 Aligned_cols=64 Identities=11% Similarity=-0.086 Sum_probs=50.7
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALK 136 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (430)
-.+....+..-+.+-++|...|.-+..+=|...+......++..+++++++..++......+.+
T Consensus 154 ~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~A~~ 217 (431)
T TIGR02035 154 SIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEEGRK 217 (431)
T ss_pred eEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHH
Confidence 4566677778888889999999888888888888888999999999999998865544444333
No 241
>PRK06178 acyl-CoA synthetase; Validated
Probab=46.19 E-value=1.5e+02 Score=29.80 Aligned_cols=84 Identities=11% Similarity=0.041 Sum_probs=61.6
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..+++.++++...++.... .+...+.++..|+..+.+. ......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ-FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH-HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788888666555443 3477888988887776443 3445667777888877664 567889999999999999999
Q ss_pred ccHHHHHHH
Q 048242 290 APIVLNSIV 298 (430)
Q Consensus 290 ~p~~l~~l~ 298 (430)
.+..+..+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887765543
No 242
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=45.53 E-value=1.6e+02 Score=29.32 Aligned_cols=87 Identities=15% Similarity=0.169 Sum_probs=58.9
Q ss_pred eeeeHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALS-QLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|.+.+...+ .+..+. ..++.++|++..+.|-.-. .....++.+..|+.++...+...+..+...+++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 567777664322 222222 3477889988777654322 233446778899988877677788899999999999998
Q ss_pred EeccccHHHHH
Q 048242 122 FVDQQYFALAE 132 (430)
Q Consensus 122 i~~~~~~~~~~ 132 (430)
......+..+.
T Consensus 272 ~~~P~~~~~l~ 282 (539)
T PRK07008 272 AGVPTVWLGLL 282 (539)
T ss_pred EechHHHHHHH
Confidence 88776665443
No 243
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=45.27 E-value=1.9e+02 Score=32.13 Aligned_cols=96 Identities=7% Similarity=0.114 Sum_probs=67.6
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCc--hhHHHHHHHhhhcCCeeeecc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNV--PAMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l~ 101 (430)
.++.++.+.. ...+|++.+...+...... .++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDV---FNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHh---cCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 3466666652 2578888887766655433 3678888877666643 233444677788888887766
Q ss_pred ccCChhhHHHHHhhcCceEEEeccccHHHH
Q 048242 102 FRLNPLNVAIILGHAEAALVFVDQQYFALA 131 (430)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (430)
...+++.+.+.+++.++.++......+..+
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 567788899999999999999888766544
No 244
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=45.23 E-value=65 Score=30.37 Aligned_cols=64 Identities=20% Similarity=0.284 Sum_probs=42.4
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc-----cCChhhHHHHHhhcCceEEEe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF-----RLNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~~~~~~vi~ 123 (430)
..+--.|...|+++||.|++- ...+..+.-|+..+|+.++.++- ..+++.++..+..-. +.|+.
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t-~ai~~ 119 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKT-KAILV 119 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTE-EEEEE
T ss_pred HHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCc-cEEEE
Confidence 344455666899999987765 45667788899999999888764 345677888776444 55554
No 245
>PRK06382 threonine dehydratase; Provisional
Probab=44.94 E-value=1.9e+02 Score=27.82 Aligned_cols=55 Identities=7% Similarity=0.051 Sum_probs=43.9
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+.....+.++|...|.-+..+-|...+......++..+++++++...+.+
T Consensus 77 v~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 77 ITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 4556667777788899999998888888777777788899999999999875433
No 246
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=44.83 E-value=1.2e+02 Score=30.55 Aligned_cols=80 Identities=10% Similarity=-0.026 Sum_probs=57.3
Q ss_pred EEechHHHHHHHHHHHhhc----CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEE
Q 048242 213 VLVSHRAAYLMSLNVVLTW----GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~~----~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~ 287 (430)
..+|...+...+..+...+ ++..+|++...++..- ..+...+.++..|+..+.+. .....++...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~-e~~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVL-QYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 3678888876665554433 6888999888877533 23445666777787777664 5678899999999999998
Q ss_pred eeccHH
Q 048242 288 CAAPIV 293 (430)
Q Consensus 288 ~~~p~~ 293 (430)
+..+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 247
>PLN02356 phosphateglycerate kinase
Probab=44.40 E-value=1.7e+02 Score=28.35 Aligned_cols=63 Identities=13% Similarity=0.005 Sum_probs=48.6
Q ss_pred HHHHcCC-CCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEec
Q 048242 61 ALSQLSI-GPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVD 124 (430)
Q Consensus 61 ~L~~~gv-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~ 124 (430)
.+.+.|. ++|.. ++....+..-+.+-++|...|.-+..+-|...+.+....++..+++++.++
T Consensus 94 ~a~~~g~~~~~g~-VveaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~ 157 (423)
T PLN02356 94 EALESGQLFPGGV-VTEGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVR 157 (423)
T ss_pred HHHhCCccCCCCE-EEEeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEEC
Confidence 3444444 36654 445666777888889999999988888888777888899999999999985
No 248
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=44.23 E-value=2.2e+02 Score=26.62 Aligned_cols=64 Identities=8% Similarity=-0.012 Sum_probs=49.9
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHHHh
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALKIM 138 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~ 138 (430)
++...+...--+.|||-++|.-.+.+=|..++..-..-++..+..+++++..+.+......+..
T Consensus 78 iaaSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv~a~r~~GaeVil~g~~~dda~~~a~~~a 141 (347)
T COG1171 78 IAASAGNHAQGVAYAAKRLGIKATIVMPETTPKIKVDATRGYGAEVILHGDNFDDAYAAAEELA 141 (347)
T ss_pred EEecCCcHHHHHHHHHHHhCCCEEEEecCCCcHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHH
Confidence 4444455555667999999999888889999999999999999999999987766555444433
No 249
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=43.86 E-value=46 Score=30.81 Aligned_cols=52 Identities=12% Similarity=0.124 Sum_probs=42.1
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 45 HYTWQQTYQR------CRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 45 ~~Ty~el~~~------~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
.+.|.++.+. ...+...+.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667766543 467777888889999999999999999888888888888864
No 250
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=43.73 E-value=2.3e+02 Score=28.05 Aligned_cols=95 Identities=13% Similarity=0.033 Sum_probs=65.1
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHH--H-HHHHhhhcCCeeeec
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMY--E-VHFGVPMTGAVLNCI 100 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~--~-~~lA~~~~G~~~~~l 100 (430)
.++.+|++.. ...+|++.+...+..... ..++.++|++...+|-...+- . ..++++..|+..+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 4566666642 267888887766554333 347788998887777554332 2 357778888887654
Q ss_pred cccCChhhHHHHHhhcCceEEEeccccHHHH
Q 048242 101 NFRLNPLNVAIILGHAEAALVFVDQQYFALA 131 (430)
Q Consensus 101 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (430)
+...+..+...+++.++.+++.....+..+
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 445677788899999999999988766544
No 251
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=43.64 E-value=2.7e+02 Score=27.80 Aligned_cols=78 Identities=12% Similarity=0.037 Sum_probs=58.1
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC-CCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ-ASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~-~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+... .++.++|++...++...- .+...+.++..|+..+.+.. ..+.++...+...++..++.
T Consensus 38 ~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e-~~~~~~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~ 116 (534)
T COG0318 38 RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPE-FLIAFLAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLIT 116 (534)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEE
Confidence 88999887766655443 347789998888887543 24456677778888888854 47888889999999999988
Q ss_pred ccH
Q 048242 290 API 292 (430)
Q Consensus 290 ~p~ 292 (430)
...
T Consensus 117 ~~~ 119 (534)
T COG0318 117 SAE 119 (534)
T ss_pred ccc
Confidence 766
No 252
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=43.53 E-value=2.5e+02 Score=27.53 Aligned_cols=85 Identities=8% Similarity=0.055 Sum_probs=61.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch-hHHHHHHHhhhcCCeeeecccc--CChhhHHHHHhhcCceE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP-AMYEVHFGVPMTGAVLNCINFR--LNPLNVAIILGHAEAAL 120 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~~~l~~~--~~~~~l~~~l~~~~~~~ 120 (430)
..+|++.+...+..+... .++..++++....|-+. ..+...++++..|+..+..++. ..+..+...++..++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 678998887666544433 47778887777666543 3355677889999998877654 35677888899999998
Q ss_pred EEeccccHHHH
Q 048242 121 VFVDQQYFALA 131 (430)
Q Consensus 121 vi~~~~~~~~~ 131 (430)
+.........+
T Consensus 236 ~~~~p~~~~~~ 246 (502)
T TIGR01734 236 WVSTPSFVDMC 246 (502)
T ss_pred EEEChhHHHHH
Confidence 88877665443
No 253
>PRK08813 threonine dehydratase; Provisional
Probab=43.35 E-value=2.9e+02 Score=26.00 Aligned_cols=57 Identities=11% Similarity=-0.045 Sum_probs=45.8
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFAL 130 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (430)
.+....+..-..+-++|...|.-+..+-|...+......++..++.++.+..++.+.
T Consensus 84 VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~g~~~~~a 140 (349)
T PRK08813 84 VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQHGNSYDEA 140 (349)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 456677778888889999999888777777777788888999999999997755443
No 254
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=43.25 E-value=2e+02 Score=32.50 Aligned_cols=96 Identities=11% Similarity=0.052 Sum_probs=66.9
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhH-HHHHHHhhhcCCeeeeccc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAM-YEVHFGVPMTGAVLNCINF 102 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~~~l~~ 102 (430)
.|+.+|++.. +..+|.+.+......... ..+++++|++....+-+.+. +.-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQN---HYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 3556666642 267888877665544333 34888999998887776554 3346777888999887765
Q ss_pred --cCChhhHHHHHhhcCceEEEeccccHHHH
Q 048242 103 --RLNPLNVAIILGHAEAALVFVDQQYFALA 131 (430)
Q Consensus 103 --~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (430)
...+..+...+++.++.++......+..+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 34677888999999999888777655443
No 255
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=43.10 E-value=1.8e+02 Score=33.16 Aligned_cols=97 Identities=8% Similarity=-0.126 Sum_probs=64.6
Q ss_pred CCCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-
Q 048242 193 DEWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR- 268 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~- 268 (430)
.|+.++++...+...+......+|+..|...+..+... .++..++++...++-... .+...++++..|+..+.++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~-~i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVD-LVVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHH-HHHHHHHHHhhCcEEeccCC
Confidence 46677776432211111123468999887666655544 478899999888876432 2445677778888888775
Q ss_pred CCCHHHHHHHHHhhCceEEeec
Q 048242 269 QASAKAIYKAIAEHGVTNFCAA 290 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~ 290 (430)
...+.++...+++.++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 4567788888888888877754
No 256
>PRK05852 acyl-CoA synthetase; Validated
Probab=43.00 E-value=3.4e+02 Score=26.90 Aligned_cols=87 Identities=10% Similarity=0.065 Sum_probs=61.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeee-ccccCChhhHHHHHhhcCceE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNC-INFRLNPLNVAIILGHAEAAL 120 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~-l~~~~~~~~l~~~l~~~~~~~ 120 (430)
..+|++.+...+..+...+ +++++|++..+.|-.. .++..+++.+..|+..+. -....++..+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 5688888877666665444 6788898777766543 455567777777776443 233456778888899999999
Q ss_pred EEeccccHHHHHH
Q 048242 121 VFVDQQYFALAEE 133 (430)
Q Consensus 121 vi~~~~~~~~~~~ 133 (430)
++.....+..+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9988876665543
No 257
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=42.89 E-value=1.7e+02 Score=28.80 Aligned_cols=84 Identities=11% Similarity=0.066 Sum_probs=59.4
Q ss_pred EechHHHHHHHHHHH---hhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVV---LTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~---~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+. ...++..++++...+|-.. ..+...++++..|+..+.+. ......+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDF-AFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 567777755544443 3457889999888877533 22345666667788877775 467889999999999999998
Q ss_pred ccHHHHHHH
Q 048242 290 APIVLNSIV 298 (430)
Q Consensus 290 ~p~~l~~l~ 298 (430)
.....+.+.
T Consensus 90 ~~~~~~~~~ 98 (509)
T PRK12406 90 HADLLHGLA 98 (509)
T ss_pred ccchhhhhh
Confidence 877666543
No 258
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=42.78 E-value=2.2e+02 Score=28.55 Aligned_cols=83 Identities=13% Similarity=0.015 Sum_probs=59.1
Q ss_pred EEechHHHHHHHHHHHhh----cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEE
Q 048242 213 VLVSHRAAYLMSLNVVLT----WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNF 287 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~ 287 (430)
-.+|.+.|...+..+.+. .++ ++|++...+|..-. ....++++...|+..+.+ ..|.+..+..-+.+-++.++
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~v 116 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVL 116 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEE
Confidence 677888776555544433 456 99999999997443 233566666677765555 67999999999999999999
Q ss_pred eeccHHHHHH
Q 048242 288 CAAPIVLNSI 297 (430)
Q Consensus 288 ~~~p~~l~~l 297 (430)
++....++..
T Consensus 117 it~d~~~~~g 126 (528)
T COG0365 117 IADDGTFRNG 126 (528)
T ss_pred EEeccccccc
Confidence 8766655543
No 259
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=42.41 E-value=2.2e+02 Score=28.37 Aligned_cols=85 Identities=13% Similarity=0.038 Sum_probs=60.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHH---HHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMY---EVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAAL 120 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~---~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ 120 (430)
..+|.+.+...+..... ..+++++|++...+|-...+- ...++++..|+..+.. +...+..+...+++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 67899988876665443 347888998887776543322 2467888889887765 4456677788899999999
Q ss_pred EEeccccHHHHH
Q 048242 121 VFVDQQYFALAE 132 (430)
Q Consensus 121 vi~~~~~~~~~~ 132 (430)
+......+..+.
T Consensus 276 ~~~~p~~~~~l~ 287 (536)
T PRK10946 276 TALVPPAVSLWL 287 (536)
T ss_pred EEeChHHHHHHH
Confidence 988776655443
No 260
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=42.39 E-value=62 Score=23.79 Aligned_cols=53 Identities=2% Similarity=-0.206 Sum_probs=37.6
Q ss_pred eeeeHHHHHHH----HHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 44 KHYTWQQTYQR----CRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 44 ~~~Ty~el~~~----~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
..+.+.++.+. ...+...+...++.+++.|+++|.++.....+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 45667666543 235666666677777889999999987776677777777863
No 261
>PRK07787 acyl-CoA synthetase; Validated
Probab=42.10 E-value=2.9e+02 Score=26.91 Aligned_cols=84 Identities=15% Similarity=0.045 Sum_probs=59.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCC--chhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPN--VPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+..+... .++.++|++...+|- ...++..+++.+..|+.++... ...+..+...++ .++.++
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 568998887766655543 367788877665553 2345666888899999888664 456788888888 898888
Q ss_pred EeccccHHHHH
Q 048242 122 FVDQQYFALAE 132 (430)
Q Consensus 122 i~~~~~~~~~~ 132 (430)
......+..+.
T Consensus 221 ~~~P~~~~~l~ 231 (471)
T PRK07787 221 FGVPTVWSRIA 231 (471)
T ss_pred EcchHHHHHHH
Confidence 87776554433
No 262
>PRK13382 acyl-CoA synthetase; Provisional
Probab=41.90 E-value=2e+02 Score=28.67 Aligned_cols=81 Identities=11% Similarity=-0.014 Sum_probs=58.2
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+.. ..++.+++++...++..-. .+...+.++..|+..+.+. .....++...+.+.++..++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 5788877655554444 3478889998888875433 3445666777888888775 467788999999999999987
Q ss_pred ccHHHH
Q 048242 290 APIVLN 295 (430)
Q Consensus 290 ~p~~l~ 295 (430)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 665443
No 263
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=41.27 E-value=34 Score=34.63 Aligned_cols=28 Identities=21% Similarity=0.157 Sum_probs=23.4
Q ss_pred CCCCeeEEEeCCCCCC-CCceEEechHHH
Q 048242 193 DEWQSIALGYTSGTTA-NPKGVLVSHRAA 220 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG-~pK~v~~t~~~l 220 (430)
.+..+.+...|||||| ++|-+.+|++.+
T Consensus 87 t~~pi~~F~~SSGTT~g~~K~IP~t~e~l 115 (606)
T PLN02247 87 SAQPITELLTSSGTSGGQPKLMPSTAEEL 115 (606)
T ss_pred CCCCcceeeccCCCCCCceeEeeccHHHH
Confidence 3566777889999995 899999998865
No 264
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=41.20 E-value=81 Score=26.34 Aligned_cols=47 Identities=4% Similarity=-0.036 Sum_probs=34.5
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHh
Q 048242 43 SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGV 90 (430)
Q Consensus 43 ~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~ 90 (430)
+.-+||+|+...+.++|..+.+. ++....+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 57789999999999999999975 222233556667776666666664
No 265
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=40.91 E-value=1.8e+02 Score=22.96 Aligned_cols=94 Identities=15% Similarity=0.124 Sum_probs=55.9
Q ss_pred hhhhhhHHHHHHHhhcce-EEEeC-CCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCCCCCCceeEEee
Q 048242 246 FHGNGWCFTWSLAALCGT-SVMLR-QASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~-~v~~~-~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
.|..|.......+...+- ++-.. ...++++++...++++..+..+.- .+..+.+..+... +...+ +++
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~g---l~~~~-viv 88 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAG---LEGIL-LYV 88 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCC---CCCCE-EEe
Confidence 688887766666655444 44443 468899999999999987764332 2344443332222 33333 677
Q ss_pred cCCC-CCHHHH----HHHHhcCcEEEeeecCcc
Q 048242 318 GGSP-PPPPIL----LAMSQKGFRVTHVYGLSE 345 (430)
Q Consensus 318 ~G~~-l~~~~~----~~~~~~~~~v~~~YG~tE 345 (430)
||.+ ++++.. +++++.| +-..||+..
T Consensus 89 GG~~vi~~~d~~~~~~~l~~~G--v~~vF~pgt 119 (134)
T TIGR01501 89 GGNLVVGKQDFPDVEKRFKEMG--FDRVFAPGT 119 (134)
T ss_pred cCCcCcChhhhHHHHHHHHHcC--CCEEECcCC
Confidence 7764 555444 3567777 345666543
No 266
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only]
Probab=40.70 E-value=64 Score=28.76 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=41.9
Q ss_pred HHHHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHH-Hc-CCCCCC-eEEEEcCCchhHH
Q 048242 22 PLWFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALS-QL-SIGPGT-AVSVLSPNVPAMY 84 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~-~~-gv~~g~-~V~i~~~n~~~~~ 84 (430)
+.++++++.+. ++++++-+ -..-|++|+..+..+.+.|+ ++ |++.++ +|.|...|.++.+
T Consensus 199 Ihely~rA~~~---aPcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvtIaaTN~p~~L 267 (368)
T COG1223 199 IHELYERARKA---APCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVTIAATNRPELL 267 (368)
T ss_pred HHHHHHHHHhc---CCeEEEehhhhhhhhhhhHHHhcccHHHHHHHHHHhccCcccCCceEEEeecCChhhc
Confidence 45555555554 45666543 35679999999999999888 44 888777 5666677777665
No 267
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=40.38 E-value=1.8e+02 Score=28.05 Aligned_cols=61 Identities=10% Similarity=-0.079 Sum_probs=49.5
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
-.+....+..-+.+-+++...|.-+..+-|...+......++..+++++.++.++......
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a~~~ 196 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKAVEE 196 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHHHHH
Confidence 4566777788888899999999988888888888888999999999999998755444333
No 268
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=40.28 E-value=3.5e+02 Score=26.53 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=42.4
Q ss_pred eeeeHHHHHHHHHHH--------------HHHHH-HcCCCCCCeEEEEcCCchhHHHHHHH-hhhcCCeeeec-------
Q 048242 44 KHYTWQQTYQRCRRL--------------ASALS-QLSIGPGTAVSVLSPNVPAMYEVHFG-VPMTGAVLNCI------- 100 (430)
Q Consensus 44 ~~~Ty~el~~~~~~l--------------a~~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~~~l------- 100 (430)
..-||.+|.+.+..+ |..|. ..++++||.| .+..++.+.-| +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 345777777776443 33333 4589999964 23334444444 67778876633
Q ss_pred -------cccCChhhHHHHHhhcC
Q 048242 101 -------NFRLNPLNVAIILGHAE 117 (430)
Q Consensus 101 -------~~~~~~~~l~~~l~~~~ 117 (430)
.-+.+++.++..++..+
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33567888888887654
No 269
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=40.08 E-value=2e+02 Score=28.71 Aligned_cols=85 Identities=9% Similarity=-0.089 Sum_probs=60.4
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+... .++..+|++...++....+ ....+.++..|+..+.+. .....++...+++.++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRH-LEAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHH-HHHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 357888886665555543 4788899988877753322 234556666788877774 56789999999999999999
Q ss_pred eccHHHHHHH
Q 048242 289 AAPIVLNSIV 298 (430)
Q Consensus 289 ~~p~~l~~l~ 298 (430)
........+.
T Consensus 117 ~~~~~~~~~~ 126 (542)
T PRK06018 117 TDLTFVPILE 126 (542)
T ss_pred EccccHHHHH
Confidence 8776555543
No 270
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=39.98 E-value=1.6e+02 Score=22.22 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=49.9
Q ss_pred hhhhhhHHHHHHHh-hcceEEEe-CCCCHHHHHHHHHhhCceEEeeccH---H---HHHHHcCCCCCCCCCCCceeEEee
Q 048242 246 FHGNGWCFTWSLAA-LCGTSVML-RQASAKAIYKAIAEHGVTNFCAAPI---V---LNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 246 ~h~~gl~~~~~~l~-~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~~p~---~---l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
.|..|+..+-..+. .|-.++.. ....++.+.+.+.+.++.++..+.+ . +..+.+..+... ...++ +++
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~---~~~~~-i~v 86 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAG---LDDIP-VLV 86 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcC---CCCCe-EEE
Confidence 78888876666664 45555454 3467889999999999988876543 1 122222222111 11333 566
Q ss_pred cCCCCCHHHHHHHHhcCcE
Q 048242 318 GGSPPPPPILLAMSQKGFR 336 (430)
Q Consensus 318 ~G~~l~~~~~~~~~~~~~~ 336 (430)
||...+..- +.+++.|+.
T Consensus 87 GG~~~~~~~-~~~~~~G~D 104 (119)
T cd02067 87 GGAIVTRDF-KFLKEIGVD 104 (119)
T ss_pred ECCCCChhH-HHHHHcCCe
Confidence 676665422 456666654
No 271
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=39.67 E-value=16 Score=36.98 Aligned_cols=29 Identities=14% Similarity=0.021 Sum_probs=24.0
Q ss_pred CCCCCeeEEEeCCCCC-CCCceEEechHHH
Q 048242 192 RDEWQSIALGYTSGTT-ANPKGVLVSHRAA 220 (430)
Q Consensus 192 ~~~~~~~~i~~TSGtt-G~pK~v~~t~~~l 220 (430)
..++.+.+...||||| |++|-+.+|.+.+
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l 126 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDI 126 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHH
Confidence 3456677788999999 8899999999655
No 272
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=39.57 E-value=2.1e+02 Score=26.04 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=43.5
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFAL 130 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (430)
+....+..-..+.++|.+.|.-++.+-|...+......++..++++++++.++...
T Consensus 69 v~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~~~ 124 (304)
T cd01562 69 VAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFDEA 124 (304)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHH
Confidence 33456777778888888999887777777667777889999999999998764433
No 273
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=39.54 E-value=3.1e+02 Score=27.36 Aligned_cols=82 Identities=10% Similarity=-0.052 Sum_probs=57.5
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..++..++++...++-.-. .+...++++..|+..+.+. ......+...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTE-FVESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 5888888666554433 3478888888777764322 2345666677788877774 457889999999999999988
Q ss_pred ccHHHHH
Q 048242 290 APIVLNS 296 (430)
Q Consensus 290 ~p~~l~~ 296 (430)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7765543
No 274
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=39.03 E-value=87 Score=22.14 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=23.8
Q ss_pred ceEEECC------eeeeHHHHHH-HHHHHHHHHHHcCCCCCCeEEEEcCCc
Q 048242 37 KSVVYES------KHYTWQQTYQ-RCRRLASALSQLSIGPGTAVSVLSPNV 80 (430)
Q Consensus 37 ~a~~~~~------~~~Ty~el~~-~~~~la~~L~~~gv~~g~~V~i~~~n~ 80 (430)
+|+++.+ -+++-.|+.+ +..+++.+|.++|++ |-+--.+|
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 4566655 3456678877 999999999998874 44544443
No 275
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=39.01 E-value=3.1e+02 Score=28.33 Aligned_cols=100 Identities=9% Similarity=-0.066 Sum_probs=66.9
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+.. ..++..+|++...++...- .+...++++..|+..+.+ +...++++...+.+.++++++.
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e-w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~ 154 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ-WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFV 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEE
Confidence 4688888766555444 3478899998888876332 233466667778777766 4578899999999999999998
Q ss_pred ccHHHHHHHcCCCCCCCCCCCceeEEeec
Q 048242 290 APIVLNSIVNAPPEDTILPLPHVVNVNTG 318 (430)
Q Consensus 290 ~p~~l~~l~~~~~~~~~~~l~~lr~v~~~ 318 (430)
....+..++..... . .+.++.++.-
T Consensus 155 ~~~~~~~~~~~~~~---~-~~~l~~ii~~ 179 (660)
T PLN02430 155 QDKKIKELLEPDCK---S-AKRLKAIVSF 179 (660)
T ss_pred CHHHHHHHHhhhcc---c-CCCceEEEEE
Confidence 87655444432111 1 3456665543
No 276
>PRK13390 acyl-CoA synthetase; Provisional
Probab=38.99 E-value=3.8e+02 Score=26.23 Aligned_cols=79 Identities=14% Similarity=0.047 Sum_probs=56.6
Q ss_pred EEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 213 VLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
..+|+..+...+..+... .++..+|++...++.... .+...+.++..|+..+.+. ...+.++...+.+.++..+.
T Consensus 23 ~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~-~~~~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i 101 (501)
T PRK13390 23 EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPE-ALVVLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLV 101 (501)
T ss_pred eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEE
Confidence 368999887666655544 478899998887776432 3445666777888877764 56788888999988888887
Q ss_pred eccH
Q 048242 289 AAPI 292 (430)
Q Consensus 289 ~~p~ 292 (430)
....
T Consensus 102 ~~~~ 105 (501)
T PRK13390 102 ASAA 105 (501)
T ss_pred Ecch
Confidence 6543
No 277
>PRK09192 acyl-CoA synthetase; Validated
Probab=38.72 E-value=2.6e+02 Score=28.21 Aligned_cols=86 Identities=9% Similarity=-0.059 Sum_probs=60.7
Q ss_pred eEEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC-CC-------HHHHHHHHH
Q 048242 212 GVLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ-AS-------AKAIYKAIA 280 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~-~~-------~~~~~~~l~ 280 (430)
.-.+|...+...+..+... .+++.++++...++. +...+...+.++..|+..+.++. +. .+++...++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n-~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~ 125 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAET-DGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLA 125 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCC-chhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHH
Confidence 3568888886665544443 478899999888886 33334456677778888887742 11 578889999
Q ss_pred hhCceEEeeccHHHHHHH
Q 048242 281 EHGVTNFCAAPIVLNSIV 298 (430)
Q Consensus 281 ~~~vt~~~~~p~~l~~l~ 298 (430)
+.++..++........+.
T Consensus 126 ~~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 126 SAQPAAIITPDELLPWVN 143 (579)
T ss_pred hcCCCEEEeChHHHHHHH
Confidence 999999988776654443
No 278
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=38.40 E-value=1.3e+02 Score=30.00 Aligned_cols=76 Identities=12% Similarity=-0.018 Sum_probs=57.3
Q ss_pred eeeHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEcC--CchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 45 HYTWQQTYQRCRRLASALS-QLSIGPGTAVSVLSP--NVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~--n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
-+|+... -+.+..+. -.|+++.|+|-+.+| ++...++-+.+|+..|++++ |....|+...-.-..+.++.++
T Consensus 261 vith~r~----~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLRY----LQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHH----HHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 3555444 44445333 349999999888866 57888999999999999977 6789999888888888888876
Q ss_pred Eecc
Q 048242 122 FVDQ 125 (430)
Q Consensus 122 i~~~ 125 (430)
-.=.
T Consensus 336 QYIG 339 (649)
T KOG1179|consen 336 QYIG 339 (649)
T ss_pred ehHH
Confidence 5433
No 279
>COG0379 NadA Quinolinate synthase [Coenzyme metabolism]
Probab=38.03 E-value=1.9e+02 Score=26.51 Aligned_cols=24 Identities=17% Similarity=0.163 Sum_probs=18.2
Q ss_pred CCHHHHHHHHHhhCCCcceEEECC
Q 048242 20 LTPLWFLERAATVHPTRKSVVYES 43 (430)
Q Consensus 20 ~t~~~~l~~~~~~~p~~~a~~~~~ 43 (430)
.--.+-+....++||+++.+.+-+
T Consensus 108 ~~~~~~~~~~~~~~P~~~vV~YvN 131 (324)
T COG0379 108 MITAEEVRAFKEKHPDAPVVTYVN 131 (324)
T ss_pred CCCHHHHHHHHHHCCCCceEEEee
Confidence 334456677789999999998866
No 280
>PRK12582 acyl-CoA synthetase; Provisional
Probab=37.81 E-value=1.7e+02 Score=30.00 Aligned_cols=78 Identities=9% Similarity=-0.128 Sum_probs=55.3
Q ss_pred EEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC-CC-----HHHHHHHHHhhC
Q 048242 213 VLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ-AS-----AKAIYKAIAEHG 283 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~-~~-----~~~~~~~l~~~~ 283 (430)
-.+|+..+...+..+.. ..++..+|++...++.. .-.+...++++..|+..+.+.. .+ ..++...+++.+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~-~e~~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNS-IEHALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCC-HHHHHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 46899988766665544 34788999998888843 3334456677778888877753 33 378888999998
Q ss_pred ceEEeecc
Q 048242 284 VTNFCAAP 291 (430)
Q Consensus 284 vt~~~~~p 291 (430)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887654
No 281
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=37.67 E-value=2.9e+02 Score=24.50 Aligned_cols=71 Identities=14% Similarity=0.072 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcC-CCCCCeEEEEcCCchhHHHHHHHhhhc------C--CeeeeccccC---ChhhHHHHHhhcCceEEE
Q 048242 55 CRRLASALSQLS-IGPGTAVSVLSPNVPAMYEVHFGVPMT------G--AVLNCINFRL---NPLNVAIILGHAEAALVF 122 (430)
Q Consensus 55 ~~~la~~L~~~g-v~~g~~V~i~~~n~~~~~~~~lA~~~~------G--~~~~~l~~~~---~~~~l~~~l~~~~~~~vi 122 (430)
.+++.+.+.+.+ +.+|++|++.+.-+.++++.+..+... + ..++-++... ..+.+..+.++.+..+.+
T Consensus 13 ~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~v 92 (258)
T PRK10696 13 RRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYHI 92 (258)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEEE
Confidence 345555666654 578999999999999998777666432 2 3444555433 334455666777766666
Q ss_pred ecc
Q 048242 123 VDQ 125 (430)
Q Consensus 123 ~~~ 125 (430)
.+.
T Consensus 93 ~~~ 95 (258)
T PRK10696 93 EEQ 95 (258)
T ss_pred EEe
Confidence 543
No 282
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=37.61 E-value=2.9e+02 Score=26.87 Aligned_cols=55 Identities=9% Similarity=0.199 Sum_probs=33.9
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc-----CChhhHHHHHhhcCceEEEec
Q 048242 66 SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR-----LNPLNVAIILGHAEAALVFVD 124 (430)
Q Consensus 66 gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 124 (430)
++++||.|++-.+ .+.....++...|+.+++++.. ...+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 7888988766543 3344455666778887766432 345666666643 56666654
No 283
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=37.15 E-value=1.9e+02 Score=26.71 Aligned_cols=59 Identities=10% Similarity=-0.105 Sum_probs=42.7
Q ss_pred CCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 70 GTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
++.|... ..+..-..+.++|...|..+..+-|...+......++..++++++++.....
T Consensus 70 ~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 70 VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFDD 128 (324)
T ss_pred CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcHHH
Confidence 3444433 4555556666888889988777777666777788899999999999875443
No 284
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=36.81 E-value=38 Score=23.13 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=15.0
Q ss_pred HHHHHHHcCCCCCCeEEEE
Q 048242 58 LASALSQLSIGPGTAVSVL 76 (430)
Q Consensus 58 la~~L~~~gv~~g~~V~i~ 76 (430)
+-..|.+.|++.||.|.|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4446778899999998875
No 285
>PRK12483 threonine dehydratase; Reviewed
Probab=36.49 E-value=2.9e+02 Score=27.66 Aligned_cols=62 Identities=11% Similarity=0.015 Sum_probs=48.8
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEAL 135 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~ 135 (430)
.+....+.....+.++|..+|..+..+=|...+......++..+++++++...+.+....+.
T Consensus 88 VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~r~~GAeVil~g~~~d~a~~~A~ 149 (521)
T PRK12483 88 VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGVRAHGGEVVLHGESFPDALAHAL 149 (521)
T ss_pred EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHH
Confidence 35666677888888999999999888888888888888999999999999876544444433
No 286
>PRK10595 SOS cell division inhibitor; Provisional
Probab=36.37 E-value=1.6e+02 Score=24.18 Aligned_cols=15 Identities=13% Similarity=0.120 Sum_probs=7.1
Q ss_pred HHHHHhhcCceEEEe
Q 048242 109 VAIILGHAEAALVFV 123 (430)
Q Consensus 109 l~~~l~~~~~~~vi~ 123 (430)
+++.|+.-++..|++
T Consensus 98 ~EqaLrsG~~~aVL~ 112 (164)
T PRK10595 98 MERALRTGNYSVVLG 112 (164)
T ss_pred HHHHHhhCCCcEEEE
Confidence 444444444445554
No 287
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=36.35 E-value=4.2e+02 Score=26.69 Aligned_cols=100 Identities=11% Similarity=-0.016 Sum_probs=67.5
Q ss_pred EechHHHHHHHHHH---HhhcCCCCCC-EEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNV---VLTWGMKEGA-VYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~---~~~~~~~~~~-~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|...+...+..+ ...++.++++ .+..+.+..|- -+.....++..+-++|-. +...-+.+...|.+.+++.++
T Consensus 89 w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~Trae-Wm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~ 167 (678)
T KOG1180|consen 89 WMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAE-WMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIF 167 (678)
T ss_pred eecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHH-HHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEE
Confidence 34555554333332 3345666444 46666665442 234567777788887766 566778899999999999999
Q ss_pred eccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 289 AAPIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 289 ~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
+.+.++..+..-.+. .+++|+++..-
T Consensus 168 T~~~LL~kl~~~l~~-----~~~vk~II~~d 193 (678)
T KOG1180|consen 168 TDSELLPKLKAPLKQ-----AKTVKHIIYFD 193 (678)
T ss_pred eCHHHHHHHHHHHhc-----cCceeEEEEec
Confidence 999999977655433 67889888754
No 288
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=35.39 E-value=17 Score=16.74 Aligned_cols=9 Identities=33% Similarity=0.663 Sum_probs=6.6
Q ss_pred eecCccccc
Q 048242 340 VYGLSEING 348 (430)
Q Consensus 340 ~YG~tE~~~ 348 (430)
+||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 588888754
No 289
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=35.30 E-value=2.1e+02 Score=27.18 Aligned_cols=59 Identities=10% Similarity=-0.066 Sum_probs=47.3
Q ss_pred CeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 71 TAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 71 ~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
....+....+..-..+.+++...|.-+..+-|...+......++..++++++++..+.+
T Consensus 94 ~~~vv~aSsGN~g~a~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 94 QATFATATDGNHGRGVAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 34556677777888888899999988887777777778888899999999999875444
No 290
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=35.24 E-value=3.2e+02 Score=25.93 Aligned_cols=56 Identities=11% Similarity=0.012 Sum_probs=45.5
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
.+....+.....+.++|.+.|..+..+-|...+......++..++++++++..+.+
T Consensus 51 vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 51 VVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKATKSYGAEVILHGDDYDE 106 (380)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHHHHHCCCEEEEECCCHHH
Confidence 45556677778888899999998888888888888889999999999999765433
No 291
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=35.00 E-value=1.1e+02 Score=25.77 Aligned_cols=57 Identities=16% Similarity=0.142 Sum_probs=39.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEECC----eeeeHH--HHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYES----KHYTWQ--QTYQRCRRLASALSQLSIGPGTAVSVL 76 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~~----~~~Ty~--el~~~~~~la~~L~~~gv~~g~~V~i~ 76 (430)
.....+-+.+..+.+|...+.+.+- .+-.|. ==.+||+.++.+|.++|+.++ +|.+.
T Consensus 98 ~~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 98 AQATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 4455666778888999777766531 333343 335689999999999998777 66555
No 292
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=34.90 E-value=1.4e+02 Score=20.89 Aligned_cols=67 Identities=7% Similarity=0.062 Sum_probs=49.9
Q ss_pred eeeeHHHHHHHHHHHHH---HHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceE
Q 048242 44 KHYTWQQTYQRCRRLAS---ALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAAL 120 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~---~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~ 120 (430)
...||.||.+.-+.++. .|....+...|-|+|+-=++... .-++.++...+.++++..+++.+++.
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 35789998887765554 56666888889999996665432 34567788888999999999888775
Q ss_pred E
Q 048242 121 V 121 (430)
Q Consensus 121 v 121 (430)
=
T Consensus 77 n 77 (88)
T COG4009 77 N 77 (88)
T ss_pred c
Confidence 3
No 293
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=34.83 E-value=71 Score=31.11 Aligned_cols=70 Identities=17% Similarity=0.203 Sum_probs=48.6
Q ss_pred HHHHHHHcCCCCCCeEEEEcC-CchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc
Q 048242 58 LASALSQLSIGPGTAVSVLSP-NVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 58 la~~L~~~gv~~g~~V~i~~~-n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
.++.+.-.|..+...|...-| -+...+.+-+-=+..-++++|++..+.-+++..++++.+|++++|.+.+
T Consensus 406 v~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeay 476 (653)
T KOG1138|consen 406 VVHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAY 476 (653)
T ss_pred HHHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhh
Confidence 344454456666555555544 2444444445555566788899999999999999999999999997764
No 294
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=34.70 E-value=4.6e+02 Score=26.14 Aligned_cols=54 Identities=9% Similarity=-0.027 Sum_probs=44.5
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF 128 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (430)
+....+.....+.++|.+.|..+..+-|...+......++..+++++++...+.
T Consensus 69 V~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~~r~~GA~Vvl~g~~~d 122 (499)
T TIGR01124 69 IAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDAVRGFGGEVVLHGANFD 122 (499)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEeCcCHH
Confidence 445667777888889999999988888888888788899999999999976543
No 295
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=34.60 E-value=2.9e+02 Score=23.45 Aligned_cols=99 Identities=8% Similarity=0.012 Sum_probs=61.4
Q ss_pred ECCeeeeHHHHHHHHHHHHHHHHH-------cCCCCCCeEEEEcCC-ch---hHHHHHHHhhhcCCeeeeccccCChhhH
Q 048242 41 YESKHYTWQQTYQRCRRLASALSQ-------LSIGPGTAVSVLSPN-VP---AMYEVHFGVPMTGAVLNCINFRLNPLNV 109 (430)
Q Consensus 41 ~~~~~~Ty~el~~~~~~la~~L~~-------~gv~~g~~V~i~~~n-~~---~~~~~~lA~~~~G~~~~~l~~~~~~~~l 109 (430)
|...+++..|.+-.++.+-..|.. .+...+.+|.+.+.. .. -...+-..+-..|.-++.+..+.+.+++
T Consensus 46 w~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l 125 (201)
T cd02070 46 YEEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF 125 (201)
T ss_pred HccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 345678888877776655544432 122123355555433 22 2233333444578888989999999999
Q ss_pred HHHHhhcCceEEEeccc---cHHHHHHHHHHhh
Q 048242 110 AIILGHAEAALVFVDQQ---YFALAEEALKIME 139 (430)
Q Consensus 110 ~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (430)
...+.+.+|++|..+.. ....+.+....+.
T Consensus 126 ~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr 158 (201)
T cd02070 126 VEAVKEHKPDILGLSALMTTTMGGMKEVIEALK 158 (201)
T ss_pred HHHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 99999999999987653 3344444444443
No 296
>PRK06721 threonine synthase; Reviewed
Probab=34.29 E-value=2.5e+02 Score=26.36 Aligned_cols=56 Identities=4% Similarity=-0.176 Sum_probs=40.9
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccC-ChhhHHHHHhhcCceEEEeccccHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRL-NPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
.+....+..-+.+.++|.+.|.-+..+-|.. .+......++..++++++++.+...
T Consensus 78 vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 78 IICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDD 134 (352)
T ss_pred EEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 3444566666777888889998777777764 3555667789999999999875443
No 297
>PRK05638 threonine synthase; Validated
Probab=34.27 E-value=2.2e+02 Score=27.79 Aligned_cols=59 Identities=12% Similarity=-0.076 Sum_probs=43.8
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAE 132 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 132 (430)
.+....+.....+..++.+.|.-+..+-|...+......++..+++++.++.+..+...
T Consensus 115 vv~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~~~~~ 173 (442)
T PRK05638 115 FIVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVDEAIE 173 (442)
T ss_pred EEEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHHHHHH
Confidence 34456666677777788888988777777666677788899999999999876544433
No 298
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=34.21 E-value=4.1e+02 Score=26.40 Aligned_cols=93 Identities=12% Similarity=0.031 Sum_probs=60.5
Q ss_pred CCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCC-CeEEEEcCCc--hhHHHHHHHhhhcCCeeeecc
Q 048242 34 PTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPG-TAVSVLSPNV--PAMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 34 p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g-~~V~i~~~n~--~~~~~~~lA~~~~G~~~~~l~ 101 (430)
++.++++... ..+|++.+...+..+.. ..++.++ |++...+|.. ..++..+++.+..|+..+.+.
T Consensus 151 ~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~ 227 (545)
T PRK07768 151 EDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFV---AAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVT 227 (545)
T ss_pred CCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHH---hcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeC
Confidence 4556666532 56899888765544433 3467776 7777676553 345555667788898887776
Q ss_pred ccC---ChhhHHHHHhhcCceEEEeccccHH
Q 048242 102 FRL---NPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 102 ~~~---~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+.. .+..+..++++.++.++.+......
T Consensus 228 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 258 (545)
T PRK07768 228 PMDFLRDPLLWAELISKYRGTMTAAPNFAYA 258 (545)
T ss_pred HHHHHHhHHHHHHHHHHhCCEEEECchHHHH
Confidence 532 4566788899999998765444433
No 299
>PRK02991 D-serine dehydratase; Provisional
Probab=34.06 E-value=2.5e+02 Score=27.46 Aligned_cols=62 Identities=10% Similarity=-0.100 Sum_probs=49.0
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
..+....+..-..+-+++...|.-+..+-|...+......++..++++++++..+.+....+
T Consensus 159 ~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a~~~A 220 (441)
T PRK02991 159 SIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVAVEEG 220 (441)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 35666777788888899999998888888887888888889999999999987654443333
No 300
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.93 E-value=2.2e+02 Score=28.57 Aligned_cols=80 Identities=10% Similarity=0.026 Sum_probs=57.3
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+... .+++.+|++...++.... .+...++++..|+..+.+. .+...++...+++.+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQ-AVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChH-HHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 57888886665554443 467888998888876433 2445666777787777664 567888999999999999988
Q ss_pred ccHHH
Q 048242 290 APIVL 294 (430)
Q Consensus 290 ~p~~l 294 (430)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76543
No 301
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=33.82 E-value=4.4e+02 Score=29.39 Aligned_cols=96 Identities=10% Similarity=0.089 Sum_probs=65.4
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch--hHHHHHHHhhhcCCeeeecc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP--AMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~~~l~ 101 (430)
.++.++.+.. ...+|.+.+...+...... .+++++|++...+|-.- .+...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4556666542 1568999887766655543 36788998887776532 33345667777888877665
Q ss_pred ccCChhhHHHHHhhcCceEEEeccccHHHH
Q 048242 102 FRLNPLNVAIILGHAEAALVFVDQQYFALA 131 (430)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (430)
.......+...+++.++..+.........+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 445556677888999999998877655443
No 302
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=33.32 E-value=2.4e+02 Score=28.26 Aligned_cols=80 Identities=10% Similarity=0.057 Sum_probs=57.0
Q ss_pred EechHHHHHHHHHHHhh----cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVLT----WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~----~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|...+...+..+... .+++.++++....+-. .-.+...+.++..|+..+.++ ......+...+++.++..+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNL-LQYPIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCC-HHHHHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 57888886665544443 4678889887777643 222445667777888888775 46788899999999999998
Q ss_pred eccHHH
Q 048242 289 AAPIVL 294 (430)
Q Consensus 289 ~~p~~l 294 (430)
..+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 766543
No 303
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=33.31 E-value=1.7e+02 Score=27.71 Aligned_cols=59 Identities=19% Similarity=0.249 Sum_probs=31.2
Q ss_pred HHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc-----CChhhHHHHHhhcCceEEE
Q 048242 60 SALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR-----LNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 60 ~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~-----~~~~~l~~~l~~~~~~~vi 122 (430)
..|...++++||.|++-.+ .+.....++...|+.++.++-+ ...+.+...+.. +.+.|+
T Consensus 63 lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 63 ITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444456777877655433 2333344555667776665431 245556665543 455555
No 304
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=33.17 E-value=83 Score=22.10 Aligned_cols=40 Identities=20% Similarity=0.015 Sum_probs=34.0
Q ss_pred HHHHHHc-CCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 59 ASALSQL-SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 59 a~~L~~~-gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..+|.+. |++.|+-++.+.....|.+..+=|++|+.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 4567765 999999999999999999999999999876544
No 305
>PRK07867 acyl-CoA synthetase; Validated
Probab=33.08 E-value=3.4e+02 Score=27.03 Aligned_cols=81 Identities=12% Similarity=-0.114 Sum_probs=57.7
Q ss_pred EechHHHHHHHHHHHhhc----CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEe
Q 048242 214 LVSHRAAYLMSLNVVLTW----GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFC 288 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~~----~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~ 288 (430)
.+|...+...+..+...+ +...++++...++. ....+...+.++..|+..+.++ ...+.++...+++.++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDN-TPEFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCC-CHHHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 578888866655444433 45667887777764 2233445677777888888775 56788999999999999999
Q ss_pred eccHHHH
Q 048242 289 AAPIVLN 295 (430)
Q Consensus 289 ~~p~~l~ 295 (430)
.......
T Consensus 107 ~~~~~~~ 113 (529)
T PRK07867 107 TESAHAE 113 (529)
T ss_pred ECHhHHH
Confidence 8876554
No 306
>PLN02409 serine--glyoxylate aminotransaminase
Probab=32.99 E-value=2.8e+02 Score=26.56 Aligned_cols=74 Identities=8% Similarity=0.018 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHH-HHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEec
Q 048242 50 QTYQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMY-EVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVD 124 (430)
Q Consensus 50 el~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~ 124 (430)
++.+..+++...|.+. |.+.++. +++..++...+ .++..++.-|-.++..++.........+++..+.+++.+.
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~~~-vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSGTP-FIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCE-EEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 4444444454444443 5544343 34433444433 3334455566655555555544445566677777776664
No 307
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=32.92 E-value=43 Score=22.83 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=16.7
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCeEEEE
Q 048242 47 TWQQTYQRCRRLASALSQLSIGPGTAVSVL 76 (430)
Q Consensus 47 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~ 76 (430)
.|=+-.-+..-+-..|.+.|++.||.|.|.
T Consensus 34 ~rf~~~L~~~Gv~~~L~~~G~~~GD~V~Ig 63 (69)
T PF09269_consen 34 RRFQRKLKKMGVEKALRKAGAKEGDTVRIG 63 (69)
T ss_dssp HHHHHHHHHTTHHHHHHTTT--TT-EEEET
T ss_pred HHHHHHHHHCCHHHHHHHcCCCCCCEEEEc
Confidence 333333344445567788899999998763
No 308
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=32.51 E-value=1.9e+02 Score=21.90 Aligned_cols=51 Identities=10% Similarity=0.128 Sum_probs=37.0
Q ss_pred HhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc---cHHHHHHHHHHhh
Q 048242 89 GVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ---YFALAEEALKIME 139 (430)
Q Consensus 89 A~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (430)
.+-..|.-++.+.+..+.+++...+.+.+|++|..+.. ....+.+....+.
T Consensus 22 ~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~ 75 (119)
T cd02067 22 ALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELK 75 (119)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHH
Confidence 33346888888889999999999999999999987643 3344444444443
No 309
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=32.33 E-value=2e+02 Score=25.44 Aligned_cols=86 Identities=13% Similarity=0.210 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc--cCCh---hhHHHHHhhcCceEEE
Q 048242 48 WQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF--RLNP---LNVAIILGHAEAALVF 122 (430)
Q Consensus 48 y~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~--~~~~---~~l~~~l~~~~~~~vi 122 (430)
++++..+..++...+.+.--....+..+...+...++.--+++-..+.. -+.+ ..++ .++...+++.++++||
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~h~~~~Y~~~~~gl~~~~~~--~~~~~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKLPGRPVVVYHDAFQYFAKRYGLKVIGVI--EISPGEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSGGEEEEEESTTHHHHHHTT-EEEEEE--SSSSSSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCeEEEEChHHHHHHHhcCCceeeee--ccccccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 3445555555555554431111225667777788888888877766554 1222 2333 3566777899999999
Q ss_pred eccccHHHHHHHH
Q 048242 123 VDQQYFALAEEAL 135 (430)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (430)
++........+..
T Consensus 205 ~e~~~~~~~~~~l 217 (256)
T PF01297_consen 205 TEPQFSSKLAEAL 217 (256)
T ss_dssp EETTS-THHHHHH
T ss_pred ecCCCChHHHHHH
Confidence 9887655544433
No 310
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=32.28 E-value=2.8e+02 Score=25.12 Aligned_cols=55 Identities=20% Similarity=0.245 Sum_probs=34.9
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc----------CChhhHHHHHhh-cCceEEEec
Q 048242 67 IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR----------LNPLNVAIILGH-AEAALVFVD 124 (430)
Q Consensus 67 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~----------~~~~~l~~~l~~-~~~~~vi~~ 124 (430)
+++||.|.+.-+.. ....-++...|+.++.+.+. .+.+.++..+++ .+++.++..
T Consensus 96 ~~~gd~Vlv~~~~h---~s~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCH---KSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCch---HHHHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 57899877664433 22344555678877766542 456778888865 467766654
No 311
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=32.01 E-value=4.5e+02 Score=26.06 Aligned_cols=90 Identities=12% Similarity=0.076 Sum_probs=58.7
Q ss_pred CCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCC-CCCeEEEEcCCchh-HHHHHHHhhhcCCeeeecc
Q 048242 33 HPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIG-PGTAVSVLSPNVPA-MYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 33 ~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~-~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~~~l~ 101 (430)
.++.+|++.. ...+|++.+...+..++.. .++. ++|++...+|-.-. .+..+++.+..|+.++..+
T Consensus 150 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~~~ 226 (525)
T PRK05851 150 DSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWLAP 226 (525)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEEcC
Confidence 3456666642 2678998888776665543 3676 78888777765432 2345677788898887654
Q ss_pred c-cC--ChhhHHHHHhhcCceEEEecc
Q 048242 102 F-RL--NPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 102 ~-~~--~~~~l~~~l~~~~~~~vi~~~ 125 (430)
+ .. .+..+...+++.++.++.+..
T Consensus 227 ~~~~~~~~~~~~~~i~~~~~t~~~~p~ 253 (525)
T PRK05851 227 TTAFSASPFRWLSWLSDSRATLTAAPN 253 (525)
T ss_pred HHHHHHCHHHHHHHHHHhCCeEEeCCc
Confidence 3 12 455678888999988765433
No 312
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=31.81 E-value=3.5e+02 Score=24.47 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=45.0
Q ss_pred CCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 70 GTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
++.| +....+.....+.++|...|.-++.+-|...+......++..+++++.+...
T Consensus 56 ~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 56 GRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred ccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 3455 6677777778888888888988888878777778888999999999988654
No 313
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=31.68 E-value=5.7e+02 Score=26.01 Aligned_cols=83 Identities=11% Similarity=-0.080 Sum_probs=57.8
Q ss_pred EEechHHHHHHHHHHHhhc--CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CC-CC--HHHHHHHHHhhCceE
Q 048242 213 VLVSHRAAYLMSLNVVLTW--GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQ-AS--AKAIYKAIAEHGVTN 286 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~-~~--~~~~~~~l~~~~vt~ 286 (430)
..+|+..+...+..+...+ .+.++|++...++... -.+...++++..|+..+.+ +. .. +.++...+++.++..
T Consensus 67 ~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~-e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 145 (612)
T PRK12476 67 VELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGI-DYVAGFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTV 145 (612)
T ss_pred eEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCCh-hHHHHHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCE
Confidence 4678888866655444333 2678899988888753 2344566777788887766 32 22 678889999999999
Q ss_pred EeeccHHHHH
Q 048242 287 FCAAPIVLNS 296 (430)
Q Consensus 287 ~~~~p~~l~~ 296 (430)
++..+.....
T Consensus 146 li~~~~~~~~ 155 (612)
T PRK12476 146 VLTTTAAAEA 155 (612)
T ss_pred EEEcHHHHHH
Confidence 9988766554
No 314
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=31.64 E-value=1.2e+02 Score=23.88 Aligned_cols=53 Identities=23% Similarity=0.269 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHc-CCCCCCeEEEEc--CCchhHHHHHHHhhhcCCeeeec
Q 048242 48 WQQTYQRCRRLASALSQL-SIGPGTAVSVLS--PNVPAMYEVHFGVPMTGAVLNCI 100 (430)
Q Consensus 48 y~el~~~~~~la~~L~~~-gv~~g~~V~i~~--~n~~~~~~~~lA~~~~G~~~~~l 100 (430)
...-.++-.-++..+.+. .+++||.+.++. .+++..+-+...+.+.|+.++-|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 81 ISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 334444445666666644 689999888875 45677777888888888887755
No 315
>PRK08638 threonine dehydratase; Validated
Probab=31.50 E-value=4.3e+02 Score=24.59 Aligned_cols=61 Identities=10% Similarity=0.003 Sum_probs=46.5
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
.+....+..-+.+.++|...|.-+..+-|...+......++..++++++++....+....+
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~a 138 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDTIAKV 138 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHHHHHH
Confidence 3445557777888889999998888887877777788899999999999976554443333
No 316
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=31.05 E-value=3.9e+02 Score=24.43 Aligned_cols=76 Identities=9% Similarity=-0.064 Sum_probs=50.2
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCc-h---------------------------hHHHHHHHhhhcCCeee
Q 048242 47 TWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNV-P---------------------------AMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 47 Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~-~---------------------------~~~~~~lA~~~~G~~~~ 98 (430)
.+.++.+....+..++.+.|+. ..|.|.+-+. . ...+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4455566678888888888764 3455554332 2 24566788899999999
Q ss_pred eccccCCh--hhHHHHHhhcCceEEEec
Q 048242 99 CINFRLNP--LNVAIILGHAEAALVFVD 124 (430)
Q Consensus 99 ~l~~~~~~--~~l~~~l~~~~~~~vi~~ 124 (430)
--.|.... ..+.++.++.+..++=-|
T Consensus 205 N~tP~~~a~~P~l~ela~~~gvpi~GdD 232 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGVPIAGDD 232 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTEEEEESS
T ss_pred eccCccccCCHHHHHHHHHcCCCeecch
Confidence 87787665 778888888886644433
No 317
>PRK06060 acyl-CoA synthetase; Validated
Probab=31.05 E-value=3.1e+02 Score=28.53 Aligned_cols=81 Identities=11% Similarity=-0.022 Sum_probs=56.7
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+.. ..++..++++...++-... .+...+.++..|+..+.++ .....++...+++.++..++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~-~~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPD-LVQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 4788888666554443 3578899999888876433 2335666677788777664 467788888889999988887
Q ss_pred ccHHHH
Q 048242 290 APIVLN 295 (430)
Q Consensus 290 ~p~~l~ 295 (430)
......
T Consensus 109 ~~~~~~ 114 (705)
T PRK06060 109 SDALRD 114 (705)
T ss_pred chHHhh
Confidence 655433
No 318
>PRK08526 threonine dehydratase; Provisional
Probab=31.02 E-value=4.3e+02 Score=25.40 Aligned_cols=62 Identities=13% Similarity=0.000 Sum_probs=47.1
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALK 136 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (430)
+....+.....+-++|.+.|.-+..+-|...+......++..+++++++...+.+....+.+
T Consensus 72 V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~~~r~~GA~Vv~~g~~~~~a~~~a~~ 133 (403)
T PRK08526 72 IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVSGTKALGAEVILKGDNYDEAYAFALE 133 (403)
T ss_pred EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHHHH
Confidence 44666777888888999999888888787777777778999999999998765444343333
No 319
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=30.98 E-value=2.6e+02 Score=26.47 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=38.2
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc-----cCChhhHHHHHhh---cCceEEEe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF-----RLNPLNVAIILGH---AEAALVFV 123 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~-----~~~~~~l~~~l~~---~~~~~vi~ 123 (430)
..+...+...++++||.|++-.+. +....-++...|+.++.++- ..+.+.+...+.+ -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 334444445577889986665443 44445566677877766543 2356677777763 35566653
No 320
>PRK09224 threonine dehydratase; Reviewed
Probab=30.60 E-value=4e+02 Score=26.53 Aligned_cols=60 Identities=7% Similarity=-0.074 Sum_probs=46.7
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEE 133 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 133 (430)
.+....+.....+.++|.+.|.-++.+-|...+......++..+++++++..++.+....
T Consensus 71 vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~~r~~GA~Vi~~g~~~~~a~~~ 130 (504)
T PRK09224 71 VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDAVRAFGGEVVLHGDSFDEAYAH 130 (504)
T ss_pred EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHH
Confidence 344567778888888999999988888787777777788999999999998654443333
No 321
>COG1611 Predicted Rossmann fold nucleotide-binding protein [General function prediction only]
Probab=30.58 E-value=2.3e+02 Score=24.27 Aligned_cols=70 Identities=17% Similarity=0.087 Sum_probs=51.3
Q ss_pred CCcceEEECCeeeeHHH-HHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhh
Q 048242 34 PTRKSVVYESKHYTWQQ-TYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLN 108 (430)
Q Consensus 34 p~~~a~~~~~~~~Ty~e-l~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~ 108 (430)
-..+++++.+......+ .++.+.++++.|.++| .+.+.....=-+=++.=++...|..++-+.|....++
T Consensus 14 ~~~i~V~~gs~~~~~~~~~~~~a~~lg~~la~~g-----~~V~tGG~~GiMea~~~gA~~~gg~~vGi~p~~~~~~ 84 (205)
T COG1611 14 IRQIVVICGSARGIEPEEYYELARELGRELAKRG-----LLVITGGGPGVMEAVARGALEAGGLVVGILPGLLHEQ 84 (205)
T ss_pred cceEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-----cEEEeCCchhhhhHHHHHHHHcCCeEEEecCCCchhh
Confidence 44667777665544444 9999999999999887 3555555555666777788899999999998766543
No 322
>PRK08198 threonine dehydratase; Provisional
Probab=30.53 E-value=4.4e+02 Score=25.24 Aligned_cols=60 Identities=15% Similarity=0.101 Sum_probs=45.8
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
+....+.....+.++|...|..+..+-|...+......++..++++++++.++.+....+
T Consensus 74 v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~~~~~~a 133 (404)
T PRK08198 74 VAASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYDEALAKA 133 (404)
T ss_pred EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHHHHH
Confidence 344556677777889999999888888877777778889999999999986544443333
No 323
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=30.44 E-value=2.9e+02 Score=24.46 Aligned_cols=55 Identities=13% Similarity=0.094 Sum_probs=42.0
Q ss_pred HHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHH-HcCCCCCCeEEEEcCCchh
Q 048242 24 WFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALS-QLSIGPGTAVSVLSPNVPA 82 (430)
Q Consensus 24 ~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~~ 82 (430)
.++.+..+..|+...+.+.| ...|-.++.+++.+.++.|. +.|+ |.| ++.-|+..
T Consensus 12 tv~~~l~~~~p~~~~iy~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~---d~i-vIaCNTA~ 73 (251)
T TIGR00067 12 SVLKEIRKQLPKEHYIYVGDTKRFPYGEKSPEFILEYVLELLTFLKERHNI---KLL-VVACNTAS 73 (251)
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC---CEE-EEeCchHH
Confidence 56677788889887777755 67888999999999999999 8787 344 45555554
No 324
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=29.98 E-value=2.7e+02 Score=25.97 Aligned_cols=74 Identities=12% Similarity=-0.033 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHc-CCCCCCeEEEEcCCchhHHHHH-HHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 52 YQRCRRLASALSQL-SIGPGTAVSVLSPNVPAMYEVH-FGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 52 ~~~~~~la~~L~~~-gv~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
.+..+++...|.+. |..++...+++..++.+.+.+. .++..-|...+.+.+......+..+.+..+.+++.+..
T Consensus 34 ~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 34 NIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 33333444444433 5655544455555555554444 45555665555555544444456677778888777643
No 325
>PRK07409 threonine synthase; Validated
Probab=29.48 E-value=2.8e+02 Score=26.04 Aligned_cols=56 Identities=7% Similarity=-0.113 Sum_probs=40.5
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccC-ChhhHHHHHhhcCceEEEeccccHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRL-NPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
.+....+..-..+.++|...|.-+..+-|.. .+......++..++++++++..+.+
T Consensus 81 iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~~~ 137 (353)
T PRK07409 81 VICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNFDD 137 (353)
T ss_pred EEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCHHH
Confidence 3445666667888888999998876666664 3555666778899999999875433
No 326
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=29.43 E-value=1.4e+02 Score=22.55 Aligned_cols=41 Identities=17% Similarity=0.130 Sum_probs=30.0
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCC-chhHHHHHHHhhhcCCe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPN-VPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n-~~~~~~~~lA~~~~G~~ 96 (430)
+.+.+.+.+.|+.+++.|.++|.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 456666777788888999999988 46666666667777754
No 327
>PLN02970 serine racemase
Probab=29.37 E-value=4.6e+02 Score=24.27 Aligned_cols=55 Identities=5% Similarity=-0.023 Sum_probs=43.9
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+..-+.+-++|...|.-+..+-|...+......++..+++++.++.....
T Consensus 79 v~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~~~~~~ 133 (328)
T PLN02970 79 VTHSSGNHAAALALAAKLRGIPAYIVVPKNAPACKVDAVIRYGGIITWCEPTVES 133 (328)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeCCCHHH
Confidence 4556777788888899999988877777777777778899999999999875443
No 328
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=28.84 E-value=3.6e+02 Score=26.07 Aligned_cols=78 Identities=8% Similarity=-0.094 Sum_probs=56.0
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+... .++..++++....+... ..+...+.++..|+..+.++ ...+..+...+.+.++..+..
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~-~~~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSP-ETLLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCH-HHHHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 57888887766655544 46788899888777533 23445667777888888774 467788888999999988876
Q ss_pred ccH
Q 048242 290 API 292 (430)
Q Consensus 290 ~p~ 292 (430)
...
T Consensus 107 ~~~ 109 (458)
T PRK09029 107 LEG 109 (458)
T ss_pred cCc
Confidence 543
No 329
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=28.79 E-value=2.6e+02 Score=27.20 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=25.6
Q ss_pred EEcCCchhHHH-HHHHhhhcCCeeeeccccCCh--hhHHHHHhhcCceEEEecc
Q 048242 75 VLSPNVPAMYE-VHFGVPMTGAVLNCINFRLNP--LNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 75 i~~~n~~~~~~-~~lA~~~~G~~~~~l~~~~~~--~~l~~~l~~~~~~~vi~~~ 125 (430)
+..+++...+. +++++++.|-.++.-.+.+.. ..+...+...++++.+++.
T Consensus 80 v~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 80 VATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred EEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 44555554444 344555666554444444432 2233345666666666654
No 330
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=28.54 E-value=1.6e+02 Score=24.83 Aligned_cols=22 Identities=18% Similarity=0.172 Sum_probs=20.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHc
Q 048242 44 KHYTWQQTYQRCRRLASALSQL 65 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~ 65 (430)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999875
No 331
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=28.42 E-value=4.8e+02 Score=25.08 Aligned_cols=91 Identities=11% Similarity=-0.038 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecc
Q 048242 22 PLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~ 101 (430)
+.+.+....+....+.++++.+. ..+-.++++|.+.|+.+ ..+.....+.++..-.+..+.-+ +.+-
T Consensus 261 ~~~~l~~~~~~l~Gkrv~i~gd~--------~~~~~l~~~L~elGm~~--v~~~t~~~~~~~~~~~~~~l~~~---~~v~ 327 (407)
T TIGR01279 261 AWRALEPHTQLLRGKKIFFFGDN--------LLELPLARFLKRCGMEV--VECGTPYIHRRFHAAELALLEGG---VRIV 327 (407)
T ss_pred HHHHHHHHHHhcCCCEEEEECCc--------hHHHHHHHHHHHCCCEE--EEecCCCCChHHHHHHHhhcCCC---CeEE
Q ss_pred ccCChhhHHHHHhhcCceEEEecc
Q 048242 102 FRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
......++.+.+++.+|++++...
T Consensus 328 ~~~d~~~l~~~i~~~~pDllig~~ 351 (407)
T TIGR01279 328 EQPDFHRQLQRIRATRPDLVVTGL 351 (407)
T ss_pred eCCCHHHHHHHHHhcCCCEEecCc
No 332
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=28.25 E-value=3e+02 Score=21.72 Aligned_cols=57 Identities=5% Similarity=-0.140 Sum_probs=42.4
Q ss_pred hHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc---cHHHHHHHHHHh
Q 048242 82 AMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ---YFALAEEALKIM 138 (430)
Q Consensus 82 ~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~ 138 (430)
-..+....+-..|.-++.+....+++++...+.+.+|++|..+.. ....+.+....+
T Consensus 19 G~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L 78 (137)
T PRK02261 19 GNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKC 78 (137)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHH
Confidence 334455556678999999999999999999999999999998752 333444444443
No 333
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=28.14 E-value=3e+02 Score=26.85 Aligned_cols=77 Identities=6% Similarity=-0.139 Sum_probs=53.2
Q ss_pred EechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|+..+...+..+... .++..++++....+... ..+...+.++..|+..+.++ ......+...++..++..++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~-~~~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSP-EMLATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 47888887766555443 46777888887777433 23345666667777777664 456778888889988888886
Q ss_pred cc
Q 048242 290 AP 291 (430)
Q Consensus 290 ~p 291 (430)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 334
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=27.81 E-value=4e+02 Score=22.96 Aligned_cols=98 Identities=8% Similarity=-0.030 Sum_probs=62.7
Q ss_pred CCeeeeHHHHHHHHHHHHHHHH-------HcCCC--CCCeEEEEcCCc----hhHHHHHHHhhhcCCeeeeccccCChhh
Q 048242 42 ESKHYTWQQTYQRCRRLASALS-------QLSIG--PGTAVSVLSPNV----PAMYEVHFGVPMTGAVLNCINFRLNPLN 108 (430)
Q Consensus 42 ~~~~~Ty~el~~~~~~la~~L~-------~~gv~--~g~~V~i~~~n~----~~~~~~~lA~~~~G~~~~~l~~~~~~~~ 108 (430)
...+++-.|.+-.++.+...|. ..... ...+|.+.+..+ .-..++-..+-..|.-++.+..+.++++
T Consensus 51 ~~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 51 GAGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 4467777787776655555432 22211 223555554443 2334444445567999999999999999
Q ss_pred HHHHHhhcCceEEEeccc---cHHHHHHHHHHhh
Q 048242 109 VAIILGHAEAALVFVDQQ---YFALAEEALKIME 139 (430)
Q Consensus 109 l~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (430)
+...+.+.+|++|..+.. ....+.+....+.
T Consensus 131 ~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~ 164 (213)
T cd02069 131 ILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMN 164 (213)
T ss_pred HHHHHHHcCCCEEEEccchhccHHHHHHHHHHHH
Confidence 999999999999998753 3344455444443
No 335
>PRK06110 hypothetical protein; Provisional
Probab=27.69 E-value=4.9e+02 Score=24.00 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=45.8
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHHHH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEALK 136 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~ 136 (430)
.+....+..-..+-++|...|..+..+-|...+......++..+++++.++..+......+.+
T Consensus 73 vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~~~~~~~~a~~ 135 (322)
T PRK06110 73 VISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALGAELIEHGEDFQAAREEAAR 135 (322)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHHHHHHHHHH
Confidence 455567777788888999999877766666555666788999999999997655444443333
No 336
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=27.42 E-value=3.9e+02 Score=24.00 Aligned_cols=57 Identities=12% Similarity=0.089 Sum_probs=43.1
Q ss_pred HHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHH
Q 048242 24 WFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMY 84 (430)
Q Consensus 24 ~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~ 84 (430)
.++....+.-|+...+...| ...|=.++.+++.++..+|.+++++ +.++.-|+.-.+
T Consensus 19 sVlrei~~~LP~e~~iY~~D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~ik----~lVIACNTASa~ 81 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVGDTARFPYGEKSEEEIRERTLEIVDFLLERGIK----ALVIACNTASAV 81 (269)
T ss_pred HHHHHHHHHCCCCcEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCC----EEEEecchHHHH
Confidence 45677777889887777654 5688899999999999999999864 555555654443
No 337
>PRK00865 glutamate racemase; Provisional
Probab=27.41 E-value=3.6e+02 Score=23.99 Aligned_cols=54 Identities=9% Similarity=0.131 Sum_probs=41.1
Q ss_pred HHHHHHHhhCCCcceEEECC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch
Q 048242 24 WFLERAATVHPTRKSVVYES------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP 81 (430)
Q Consensus 24 ~~l~~~~~~~p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~ 81 (430)
.++.+..+..|+...+.+.| ...|-.|+.+++.+.+..|.+.|+ |.|+|.| |+.
T Consensus 19 tvl~~i~~~lp~~~~iY~~D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~---d~iVIaC-NTa 78 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVGDTARFPYGEKSEEEIRERTLEIVEFLLEYGV---KMLVIAC-NTA 78 (261)
T ss_pred HHHHHHHHHCCCCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC---CEEEEeC-chH
Confidence 45677778889987777755 678889999999999999998776 3444444 443
No 338
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.26 E-value=6.8e+02 Score=25.53 Aligned_cols=82 Identities=9% Similarity=-0.112 Sum_probs=54.7
Q ss_pred EEechHHHHHHHHHHHhhc--CCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCC---HHHHHHHHHhhCceE
Q 048242 213 VLVSHRAAYLMSLNVVLTW--GMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQAS---AKAIYKAIAEHGVTN 286 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~---~~~~~~~l~~~~vt~ 286 (430)
..+|+..+...+..+...+ .+..+|++...++... ..+...++++..|+..+.+ +... ..++...+++.++..
T Consensus 54 ~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 54 RDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNL-DYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred eEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCh-HHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 4578888866655444332 2678899888887643 2233556667778877755 3222 467888999999999
Q ss_pred EeeccHHHH
Q 048242 287 FCAAPIVLN 295 (430)
Q Consensus 287 ~~~~p~~l~ 295 (430)
++.......
T Consensus 133 vi~~~~~~~ 141 (631)
T PRK07769 133 ILTTTDSAE 141 (631)
T ss_pred EEEChHHHH
Confidence 988776544
No 339
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=27.21 E-value=1e+02 Score=23.99 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=45.2
Q ss_pred ceEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEeee
Q 048242 262 GTSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHVY 341 (430)
Q Consensus 262 ~~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~Y 341 (430)
-.+.+....+.+.+.+.+....+-+....+.+=..++.. +++||++...|...+.-....+++.|+.+.+.=
T Consensus 19 ~~v~~~~~~~~~~~~~~l~~~d~ii~~~~~~~~~~~l~~--------~~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~ 90 (133)
T PF00389_consen 19 FEVEFCDSPSEEELAERLKDADAIIVGSGTPLTAEVLEA--------APNLKLISTAGAGVDNIDLEAAKERGIPVTNVP 90 (133)
T ss_dssp SEEEEESSSSHHHHHHHHTTESEEEESTTSTBSHHHHHH--------HTT-SEEEESSSSCTTB-HHHHHHTTSEEEE-T
T ss_pred ceEEEeCCCCHHHHHHHhCCCeEEEEcCCCCcCHHHHhc--------cceeEEEEEcccccCcccHHHHhhCeEEEEEeC
Confidence 345555566677777777776655554332111111111 568899999888888878888888999998775
Q ss_pred c
Q 048242 342 G 342 (430)
Q Consensus 342 G 342 (430)
|
T Consensus 91 g 91 (133)
T PF00389_consen 91 G 91 (133)
T ss_dssp T
T ss_pred C
Confidence 4
No 340
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=27.13 E-value=5e+02 Score=24.84 Aligned_cols=90 Identities=12% Similarity=0.214 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecc-------ccCChhhHHHHHhhcCceEEEeccc-
Q 048242 55 CRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCIN-------FRLNPLNVAIILGHAEAALVFVDQQ- 126 (430)
Q Consensus 55 ~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~-------~~~~~~~l~~~l~~~~~~~vi~~~~- 126 (430)
...+...++.. +.+||.|++..| .|....-.+..+|+.+++++ .....+++...+.. +.|+|+....
T Consensus 99 ~~al~~~~~a~-~~pGDeVlip~P---~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~-ktk~i~ln~P~ 173 (393)
T COG0436 99 KEALFLAFLAL-LNPGDEVLIPDP---GYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP-KTKAIILNSPN 173 (393)
T ss_pred HHHHHHHHHHh-cCCCCEEEEeCC---CCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc-cceEEEEeCCC
Q ss_pred -------cHHHHHHHHHHhhccCCCCCCCCeEEEecC
Q 048242 127 -------YFALAEEALKIMEGKSEGLFKPPVLIVIGD 156 (430)
Q Consensus 127 -------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 156 (430)
..+.+.++.+... ....++..|+
T Consensus 174 NPTGav~~~~~l~~i~~~a~-------~~~i~ii~DE 203 (393)
T COG0436 174 NPTGAVYSKEELKAIVELAR-------EHDIIIISDE 203 (393)
T ss_pred CCcCcCCCHHHHHHHHHHHH-------HcCeEEEEeh
No 341
>TIGR03765 ICE_PFL_4695 integrating conjugative element protein, PFL_4695 family. This model describes a protein family exemplified by PFL_4695 of Pseudomonas fluorescens Pf-5. Full-length proteins in this family show some architectural variety, but this model represents a conserved domain. Most or all member proteins belong to laterally transferred chromosomal islands called integrative conjugative elements, or ICE.
Probab=27.12 E-value=2.1e+02 Score=21.46 Aligned_cols=96 Identities=17% Similarity=0.068 Sum_probs=57.7
Q ss_pred CCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCee
Q 048242 18 TALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVL 97 (430)
Q Consensus 18 ~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 97 (430)
+.++.+.+-.+..+...-.+.++.++...|.+-|.++..+ |.+++ .|+++..-....-..-+-.+.-|...
T Consensus 7 ~~ltpG~v~~r~l~~pg~~p~FlIGdD~~S~~WL~~~~~~----L~~l~-----AvGlVVnV~t~~~l~~Lr~lapgl~l 77 (105)
T TIGR03765 7 PRLTPGKVQRRPLNLPGLTPLFLIGDDPASRQWLQQNAAA----LKSLG-----AVGLVVNVETAAALQRLRALAPGLPL 77 (105)
T ss_pred CCCCCCccccceecCCCCCceEEEeCCHHHHHHHHHHHHH----HHHCC-----CeEEEEecCCHHHHHHHHHHcCCCcc
Confidence 3444455444444433335677777888888888887766 44443 35555444333333333333346555
Q ss_pred eeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 98 NCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 98 ~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
.|. +.+++.+.+......++|++..
T Consensus 78 ~P~----sgddLa~rL~l~hYPvLit~tg 102 (105)
T TIGR03765 78 LPV----SGDDLAERLGLRHYPVLITATG 102 (105)
T ss_pred cCC----CHHHHHHHhCCCcccEEEecCc
Confidence 544 4778888898888889988764
No 342
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=27.01 E-value=3.6e+02 Score=26.84 Aligned_cols=77 Identities=12% Similarity=0.032 Sum_probs=54.6
Q ss_pred EechHHHHHHHHHHH---hhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeC-CCCHHHHHHHHHhhCceEEee
Q 048242 214 LVSHRAAYLMSLNVV---LTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLR-QASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~---~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~-~~~~~~~~~~l~~~~vt~~~~ 289 (430)
.+|...+...+..+. ...++.+++++...++... ..+...+.++..|+..+.+. ......+...+++.++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTP-DHPINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCh-HHHHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 578888765544443 3457889999988888533 22345666667788887664 467889999999999999876
Q ss_pred cc
Q 048242 290 AP 291 (430)
Q Consensus 290 ~p 291 (430)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 343
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=26.89 E-value=6.7e+02 Score=26.13 Aligned_cols=89 Identities=7% Similarity=0.010 Sum_probs=64.0
Q ss_pred ceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceE
Q 048242 211 KGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML-RQASAKAIYKAIAEHGVTN 286 (430)
Q Consensus 211 K~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~ 286 (430)
....+|++.+...+..+.. ..+++++|++...++... -.+...++++..|+..+.. +...++++...+.+.++..
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW-EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH-HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 3567899988766665544 357889999888887632 2233456666777776665 4578899999999999999
Q ss_pred EeeccHHHHHHHcC
Q 048242 287 FCAAPIVLNSIVNA 300 (430)
Q Consensus 287 ~~~~p~~l~~l~~~ 300 (430)
++.....+..+...
T Consensus 197 lv~~~~~~~~l~~~ 210 (700)
T PTZ00216 197 IVCNGKNVPNLLRL 210 (700)
T ss_pred EEECHHHHHHHHHh
Confidence 99988776666543
No 344
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.71 E-value=3.1e+02 Score=21.45 Aligned_cols=86 Identities=17% Similarity=0.184 Sum_probs=51.9
Q ss_pred hhhhhhHHHHHHHhhcceEEEeC--CCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCCCCCCceeEEee
Q 048242 246 FHGNGWCFTWSLAALCGTSVMLR--QASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~~v~~~--~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
.|.-|-...-..+..++--|+.. ..+++.+++...++++.++..+.. .+..+.+..+... +..++ ++.
T Consensus 14 ~Hd~g~~iv~~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g---~~~i~-viv 89 (132)
T TIGR00640 14 GHDRGAKVIATAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLG---RPDIL-VVV 89 (132)
T ss_pred ccHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcC---CCCCE-EEE
Confidence 57777666666666666666653 357899999999999988765432 2333333322211 22333 455
Q ss_pred cCCCCCHHHHHHHHhcCcE
Q 048242 318 GGSPPPPPILLAMSQKGFR 336 (430)
Q Consensus 318 ~G~~l~~~~~~~~~~~~~~ 336 (430)
||.. +.+..+.+++.|+.
T Consensus 90 GG~~-~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 90 GGVI-PPQDFDELKEMGVA 107 (132)
T ss_pred eCCC-ChHhHHHHHHCCCC
Confidence 5555 55666777777664
No 345
>PRK05939 hypothetical protein; Provisional
Probab=26.63 E-value=5.7e+02 Score=24.45 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=27.4
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEec
Q 048242 67 IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVD 124 (430)
Q Consensus 67 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~ 124 (430)
+++||.|++.-+.-......+-++.+.|+.+..++.. ..+++...+.. +.++|+++
T Consensus 83 l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~ve 138 (397)
T PRK05939 83 LRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFVE 138 (397)
T ss_pred cCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC-CHHHHHHhCCC-CCeEEEEE
Confidence 5677776554321111112222344567666666542 44556665542 55666653
No 346
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=26.62 E-value=3.7e+02 Score=24.90 Aligned_cols=19 Identities=5% Similarity=0.246 Sum_probs=11.7
Q ss_pred HHHHHHHHhc-CcEEEeeec
Q 048242 324 PPILLAMSQK-GFRVTHVYG 342 (430)
Q Consensus 324 ~~~~~~~~~~-~~~v~~~YG 342 (430)
.++.+.+.+. |+.+..+++
T Consensus 305 ~~~~~~L~~~~gI~~~~g~~ 324 (356)
T cd06451 305 DEVVRRLMKRYNIEIAGGLG 324 (356)
T ss_pred HHHHHHHHHhCCEEEecccc
Confidence 4566666654 777765554
No 347
>PF11072 DUF2859: Protein of unknown function (DUF2859); InterPro: IPR021300 This model describes a protein family exemplified by PFL_4695 of Pseudomonas fluorescens Pf-5. Full-length proteins in this family show some architectural variety, but this model represents a conserved domain. Most or all member proteins belong to laterally transferred chromosomal islands called integrative conjugative elements, or ICE.
Probab=26.58 E-value=2e+02 Score=22.92 Aligned_cols=100 Identities=17% Similarity=0.105 Sum_probs=65.9
Q ss_pred CCCCCCCCHHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhc
Q 048242 14 PANFTALTPLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMT 93 (430)
Q Consensus 14 ~~~~~~~t~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~ 93 (430)
+...+.+|.+.+-.+..+...-++.++.++..+|.+-|.++..+ |.+++ .|+++..-....-..-+--+.-
T Consensus 41 PV~S~~ltpG~V~~r~l~~pg~~plFlVGdD~~S~~WL~~~~~~----L~~l~-----AvGlVVNV~t~~~L~~Lr~lap 111 (142)
T PF11072_consen 41 PVRSPELTPGKVERRPLQLPGLQPLFLVGDDPLSRQWLQQNAEE----LKQLG-----AVGLVVNVATEAALQRLRQLAP 111 (142)
T ss_pred CccCCCcCcCccccceecCCCCCCEEEEcCCHHHHHHHHHHHHH----HHHCC-----CeEEEEecCCHHHHHHHHHHcC
Confidence 33444666777666666655557788888888899888888766 44443 3556554433333333333445
Q ss_pred CCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 94 GAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 94 G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
|....|+ +.+++...|......++|++..
T Consensus 112 gl~l~P~----sgddLA~rL~l~HYPvLIt~~g 140 (142)
T PF11072_consen 112 GLPLLPV----SGDDLARRLGLSHYPVLITATG 140 (142)
T ss_pred CCeecCC----CHHHHHHHhCCCcccEEeecCC
Confidence 7666665 4788888999999999988753
No 348
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=26.49 E-value=5.1e+02 Score=23.84 Aligned_cols=55 Identities=13% Similarity=0.013 Sum_probs=44.1
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+..-..+-++|...|.-+..+-|...+......++..++++++++..+..
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (317)
T TIGR02991 71 VAASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQDD 125 (317)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCHHH
Confidence 4556677778888899999998877777777777888899999999999875433
No 349
>PRK07591 threonine synthase; Validated
Probab=26.45 E-value=3.7e+02 Score=26.02 Aligned_cols=88 Identities=14% Similarity=-0.027 Sum_probs=55.7
Q ss_pred cceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHH
Q 048242 36 RKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIIL 113 (430)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l 113 (430)
+..+-.++ -+-|+++-- +...-..+.+.|. +.| +....+.....+..+|.+.|.-+..+-|...+......+
T Consensus 106 ~l~~K~E~~nPtGSfKdRg--a~~~v~~A~~~g~---~~v-v~aSsGN~g~alA~~aa~~Gl~~~I~vP~~~~~~k~~~~ 179 (421)
T PRK07591 106 NLYIKDDSVNPTHSFKDRV--VSVALTAARELGF---TTV-ACASTGNLANSVAAHAARAGLDSCVFIPADLEAGKIVGT 179 (421)
T ss_pred cEEEEeCCCCCccChHHHH--HHHHHHHHHHcCC---CEE-EEeCCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHH
Confidence 45555443 344554421 2222223334453 344 456677777888888889998877777766666667778
Q ss_pred hhcCceEEEeccccHH
Q 048242 114 GHAEAALVFVDQQYFA 129 (430)
Q Consensus 114 ~~~~~~~vi~~~~~~~ 129 (430)
+..++++++++.++.+
T Consensus 180 ~~~GA~Vi~v~g~~d~ 195 (421)
T PRK07591 180 LVYGPTLVAVDGNYDD 195 (421)
T ss_pred HHcCCEEEEECCCHHH
Confidence 9999999999876433
No 350
>PRK06352 threonine synthase; Validated
Probab=26.35 E-value=4e+02 Score=25.01 Aligned_cols=55 Identities=5% Similarity=-0.127 Sum_probs=40.5
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccC-ChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRL-NPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+..-..+.++|.+.|..+..+-|.. .+......++..++++++++..+..
T Consensus 79 V~aSsGN~G~AlA~~aa~~G~~~~ivvp~~~~~~~k~~~~~a~GA~V~~~~~~~~~ 134 (351)
T PRK06352 79 ICASTGNTSAAAAAYATRAGLKAYIVIPEGKVALGKLAQAVMYGADIISIQGNFDE 134 (351)
T ss_pred EEECCcHHHHHHHHHHHHcCCcEEEEEeCCCCcHHHHHHHHhcCCEEEEECCCHHH
Confidence 444555566777888889998888887775 3555666778999999999875433
No 351
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.
Probab=26.35 E-value=3.6e+02 Score=25.91 Aligned_cols=57 Identities=11% Similarity=-0.090 Sum_probs=45.4
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
..+....+..-..+-++|.+.|.-+..+-|...+......++..++++++++.++..
T Consensus 115 ~vv~aSsGN~g~alA~~aa~~Gi~~~IvvP~~~~~~K~~~ir~~GAeVi~~~~~~~~ 171 (396)
T TIGR03528 115 TFVTATDGNHGRGVAWAANQLGQKSVVYMPKGSAQIRLENIRAEGAECTITDLNYDD 171 (396)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEEeCCCcHHHHHHHHhcCCEEEEECCCHHH
Confidence 456666777788888999999988877777767777788889999999999875443
No 352
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=26.22 E-value=3.2e+02 Score=27.86 Aligned_cols=79 Identities=5% Similarity=-0.191 Sum_probs=56.7
Q ss_pred eEEechHHHHHHHHHHHhh---cCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCC-CC-----HHHHHHHHHhh
Q 048242 212 GVLVSHRAAYLMSLNVVLT---WGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQ-AS-----AKAIYKAIAEH 282 (430)
Q Consensus 212 ~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~-~~-----~~~~~~~l~~~ 282 (430)
...+|...+...+..+... .++..+|++...++.... .+...+.++..|+..+.+.. .. ..++...+++.
T Consensus 67 ~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e-~~~~~lA~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~ 145 (614)
T PRK08180 67 WRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIE-HALLALAAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELL 145 (614)
T ss_pred eeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHH-HHHHHHHHHHcCCeEeeeccccccccCCHHHHHHHHhcC
Confidence 3567988887666655543 478899999888876432 23456677778888887753 33 67888899999
Q ss_pred CceEEeecc
Q 048242 283 GVTNFCAAP 291 (430)
Q Consensus 283 ~vt~~~~~p 291 (430)
++..++...
T Consensus 146 ~~~~li~~~ 154 (614)
T PRK08180 146 TPGLVFADD 154 (614)
T ss_pred CCcEEEEcC
Confidence 988888754
No 353
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.14 E-value=3e+02 Score=21.02 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=51.0
Q ss_pred hhhhhhHHHHHHHhhcceEEEe-C-CCCHHHHHHHHHhhCceEEeeccH------HHHHHHcCCCCCCCCCCCceeEEee
Q 048242 246 FHGNGWCFTWSLAALCGTSVML-R-QASAKAIYKAIAEHGVTNFCAAPI------VLNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~~v~~-~-~~~~~~~~~~l~~~~vt~~~~~p~------~l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
.|..|+......+..++--++. . ...++.+.+.+.+.++.++..+-. .+..+.+..+... +..++ ++.
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~---~~~i~-i~~ 86 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELG---AGDIL-VVG 86 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcC---CCCCE-EEE
Confidence 6888877666666555444444 3 356789999999999999876532 2222222222211 23333 555
Q ss_pred cCCCCCHHHHHHHHhcCcE
Q 048242 318 GGSPPPPPILLAMSQKGFR 336 (430)
Q Consensus 318 ~G~~l~~~~~~~~~~~~~~ 336 (430)
||. .+++..+++++.|+.
T Consensus 87 GG~-~~~~~~~~~~~~G~d 104 (122)
T cd02071 87 GGI-IPPEDYELLKEMGVA 104 (122)
T ss_pred ECC-CCHHHHHHHHHCCCC
Confidence 554 456667777777643
No 354
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=26.11 E-value=2.5e+02 Score=20.07 Aligned_cols=49 Identities=12% Similarity=0.019 Sum_probs=29.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCC
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGA 95 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 95 (430)
..+.+.++......+.. +.. +.+++.|+++|.++.....+...+...|.
T Consensus 33 ~~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 81 (96)
T cd01529 33 RSIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGG 81 (96)
T ss_pred EeCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCC
Confidence 35666666554444432 222 35677888888887666655555666675
No 355
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=25.69 E-value=5.4e+02 Score=24.36 Aligned_cols=55 Identities=16% Similarity=0.129 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc--c----CChhhHHHHHhhc------CceEEEec
Q 048242 67 IGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF--R----LNPLNVAIILGHA------EAALVFVD 124 (430)
Q Consensus 67 v~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~--~----~~~~~l~~~l~~~------~~~~vi~~ 124 (430)
+++||.|.+.-. .+...+.++...|+.++.++. + .+.+.+...++.. ++++|+++
T Consensus 99 ~~~gd~Vlv~~~---~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDGL---AHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECCC---chHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 467887665422 223333456677887777654 1 3467777777643 57777754
No 356
>PRK08197 threonine synthase; Validated
Probab=25.58 E-value=4e+02 Score=25.49 Aligned_cols=55 Identities=16% Similarity=-0.065 Sum_probs=41.1
Q ss_pred EEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH
Q 048242 74 SVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF 128 (430)
Q Consensus 74 ~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (430)
.+....+.....+-.++.+.|.-+..+-|...+......++..+++++.++.+..
T Consensus 130 vv~aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~Vi~v~~~~~ 184 (394)
T PRK08197 130 LAMPTNGNAGAAWAAYAARAGIRATIFMPADAPEITRLECALAGAELYLVDGLIS 184 (394)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 3445556666777777788898777777766666778889999999999987543
No 357
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=25.52 E-value=3.8e+02 Score=26.26 Aligned_cols=83 Identities=19% Similarity=0.318 Sum_probs=0.0
Q ss_pred CCCCCCceEEechHHHHHHHHHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEe----CCCCHHHHHHHHH
Q 048242 205 GTTANPKGVLVSHRAAYLMSLNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVML----RQASAKAIYKAIA 280 (430)
Q Consensus 205 GttG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~----~~~~~~~~~~~l~ 280 (430)
|-.-.|.-|++|..+ .+...+...+-..++|+++.--|-|+. ..-..-..|..++-+ ...+++.+-+.++
T Consensus 150 g~~~~~~~IiiT~G~--q~al~l~~~~l~~pGd~v~vE~PtY~~----~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~ 223 (459)
T COG1167 150 GISCEPEQIVITSGA--QQALDLLLRLLLDPGDTVLVEDPTYPG----ALQALEALGARVIPVPVDEDGIDPEALEEALA 223 (459)
T ss_pred CCccCcCeEEEeCCH--HHHHHHHHHHhCCCCCEEEEcCCCcHH----HHHHHHHcCCcEEecCCCCCCCCHHHHHHHHh
Q ss_pred hhCceEEeeccHH
Q 048242 281 EHGVTNFCAAPIV 293 (430)
Q Consensus 281 ~~~vt~~~~~p~~ 293 (430)
++++..++++|+.
T Consensus 224 ~~~~k~~y~~P~~ 236 (459)
T COG1167 224 QWKPKAVYVTPTF 236 (459)
T ss_pred hcCCcEEEECCCC
No 358
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=25.38 E-value=4.2e+02 Score=22.42 Aligned_cols=98 Identities=5% Similarity=-0.101 Sum_probs=58.9
Q ss_pred CCeeeeHHHHHHHHHHHHHHHH---H-cC----CCCCCeEEEEcCC-ch---hHHHHHHHhhhcCCeeeeccccCChhhH
Q 048242 42 ESKHYTWQQTYQRCRRLASALS---Q-LS----IGPGTAVSVLSPN-VP---AMYEVHFGVPMTGAVLNCINFRLNPLNV 109 (430)
Q Consensus 42 ~~~~~Ty~el~~~~~~la~~L~---~-~g----v~~g~~V~i~~~n-~~---~~~~~~lA~~~~G~~~~~l~~~~~~~~l 109 (430)
...+++-.|.+..++.+...+. . .. -+...+|.+.+.. .. -...+-..+-..|.-++.+.++.+.+++
T Consensus 48 ~~gei~va~~~~a~~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~ 127 (197)
T TIGR02370 48 EDGELFLPHVMMSADAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTV 127 (197)
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHH
Confidence 4467777776655544443331 1 11 1122345555443 32 2333344445569999999999999999
Q ss_pred HHHHhhcCceEEEeccc---cHHHHHHHHHHhh
Q 048242 110 AIILGHAEAALVFVDQQ---YFALAEEALKIME 139 (430)
Q Consensus 110 ~~~l~~~~~~~vi~~~~---~~~~~~~~~~~~~ 139 (430)
...+++.+|++|..+-. ....+.+..+.+.
T Consensus 128 v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~ 160 (197)
T TIGR02370 128 VEKVKKEKPLMLTGSALMTTTMYGQKDINDKLK 160 (197)
T ss_pred HHHHHHcCCCEEEEccccccCHHHHHHHHHHHH
Confidence 99999999999998753 2333444444333
No 359
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=25.07 E-value=2.2e+02 Score=23.32 Aligned_cols=42 Identities=10% Similarity=0.021 Sum_probs=26.7
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCC-CCCeEEEEcCCchhHHHHHH
Q 048242 46 YTWQQTYQRCRRLASALSQLSIG-PGTAVSVLSPNVPAMYEVHF 88 (430)
Q Consensus 46 ~Ty~el~~~~~~la~~L~~~gv~-~g~~V~i~~~n~~~~~~~~l 88 (430)
+||.|+.+.+.++|..+.+. .+ ..+.|+-.+..+..+...+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~-~~~~~~vvv~i~~GG~~~a~~l~ 45 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED-YAGKPLVLLCVLKGSFPFFADLI 45 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH-cCCCCeEEEEEccCCHHHHHHHH
Confidence 79999999999999999875 21 22233333444444443333
No 360
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=24.99 E-value=3.4e+02 Score=24.18 Aligned_cols=54 Identities=11% Similarity=-0.020 Sum_probs=36.6
Q ss_pred CCeEEEEcCCchhHHHHHHHhhhcCC---eeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 70 GTAVSVLSPNVPAMYEVHFGVPMTGA---VLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~---~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
+.++.+-.-...+.+. .|.++|. -.+...+..+.+.=..++++.+++++++-++
T Consensus 150 ~~~~~~RvLP~~~~l~---~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~S 206 (256)
T TIGR00715 150 EAVVFVRVLPYPQALA---QALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAVVTKAS 206 (256)
T ss_pred CceEEEEECCCchhhH---HHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCC
Confidence 3444444334445554 5555554 3677777888887789999999999999654
No 361
>TIGR00260 thrC threonine synthase. Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model.
Probab=24.99 E-value=3.9e+02 Score=24.66 Aligned_cols=57 Identities=9% Similarity=-0.114 Sum_probs=40.7
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccC-ChhhHHHHHhhcCceEEEeccccHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRL-NPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
..+....+-.-..+.+++...|.-++.+-|.. .+..-...++..++++++++.++.+
T Consensus 73 ~vv~aSsGN~g~a~A~~a~~~g~~~~v~~p~~~~s~~k~~~~~~~GA~Vi~~~~~~~~ 130 (328)
T TIGR00260 73 TVLCASTGNTGAAAAAYAGKAGVKVVILYPAGKISLGKLAQALGYNAEVVAIDGNFDD 130 (328)
T ss_pred EEEEeCCcHHHHHHHHHhccCCCcEEEEECCCCCCHHHHHHHHhcCcEEEEecCCHHH
Confidence 34445555566666688889998887777765 4556667778899999999875433
No 362
>PTZ00297 pantothenate kinase; Provisional
Probab=24.67 E-value=7.2e+02 Score=28.73 Aligned_cols=98 Identities=13% Similarity=0.027 Sum_probs=67.5
Q ss_pred EEechHHHHHHHHHHH---hhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEee
Q 048242 213 VLVSHRAAYLMSLNVV---LTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCA 289 (430)
Q Consensus 213 v~~t~~~l~~~~~~~~---~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~ 289 (430)
..+|++.+...+..+. ...++.++|++...++...- .....++++..|+..+-+. .....+...+.+.++.+++.
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~E-wvia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVfv 533 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRN-IVILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVFA 533 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEEE
Confidence 3588888766555443 34689999999888885322 2334566667777777664 35678999999999999999
Q ss_pred ccHHHHHHHcCCCCCCCCCCCceeEEeecC
Q 048242 290 APIVLNSIVNAPPEDTILPLPHVVNVNTGG 319 (430)
Q Consensus 290 ~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G 319 (430)
....+..+.... -+.||.+++-.
T Consensus 534 ~~~~l~kl~~i~-------~~~Lr~IIv~d 556 (1452)
T PTZ00297 534 DRNSVAAILTCR-------SRKLETVVYTH 556 (1452)
T ss_pred chhHHHHHHhhc-------ccCCcEEEEEC
Confidence 888888776532 12567666643
No 363
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.66 E-value=4.3e+02 Score=23.75 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=41.3
Q ss_pred CCeEEEEcCCchhHHHHHHHhhhcCCeeeecccc--CCh---hhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 70 GTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFR--LNP---LNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 70 g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~--~~~---~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
+.++.+...+...++.--+++-..+..- +++. -++ .++...+++.++++||++........+.
T Consensus 160 ~~~~~~t~H~af~Y~~~~ygl~~~~~~~--~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ 227 (276)
T cd01016 160 QQRVLVTAHDAFGYFGRAYGFEVKGLQG--ISTDSEAGLRDINELVDLIVERKIKAIFVESSVNQKSIEA 227 (276)
T ss_pred hcCeEEEecCcHHHHHHHcCCeEecCcC--CCcccCCCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHH
Confidence 3456677677888888877777666321 2232 233 4566777889999999998766544433
No 364
>PRK08329 threonine synthase; Validated
Probab=24.57 E-value=5.9e+02 Score=23.84 Aligned_cols=66 Identities=15% Similarity=0.122 Sum_probs=45.2
Q ss_pred HHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccH
Q 048242 59 ASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYF 128 (430)
Q Consensus 59 a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~ 128 (430)
...+.+.|. +.|+. ...+.....+-.++.+.|.-+..+-|...+..-...++..++++++++.+..
T Consensus 96 i~~a~~~g~---~~vv~-aSsGN~g~alA~~aa~~G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~~~~ 161 (347)
T PRK08329 96 VAKLKEEGI---NEVVI-DSSGNAALSLALYSLSEGIKVHVFVSYNASKEKISLLSRLGAELHFVEGDRM 161 (347)
T ss_pred HHHHHHcCC---CEEEE-ECCCcHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCCHH
Confidence 334445554 34433 4455566666677778888777776766677778889999999999987643
No 365
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=24.44 E-value=2.8e+02 Score=25.54 Aligned_cols=75 Identities=15% Similarity=0.019 Sum_probs=42.3
Q ss_pred eeeHHHHHHHHHHH---HHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 45 HYTWQQTYQRCRRL---ASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 45 ~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
.+++.+........ .+.+...++++|++|.|...-+.-..++++|-. .|+.++.+... .+ -..++++.+++.+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~VlV~G~g~iG~~a~~~a~~-~G~~vi~~~~~--~~-~~~~a~~~Ga~~v 213 (329)
T TIGR02822 138 GYDDVELAPLLCAGIIGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALA-QGATVHVMTRG--AA-ARRLALALGAASA 213 (329)
T ss_pred CCCHHHhHHHhccchHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHH-CCCeEEEEeCC--hH-HHHHHHHhCCcee
Confidence 45565544332221 122334578999999999875555555555443 57765544332 22 2456777787766
Q ss_pred Ee
Q 048242 122 FV 123 (430)
Q Consensus 122 i~ 123 (430)
+.
T Consensus 214 i~ 215 (329)
T TIGR02822 214 GG 215 (329)
T ss_pred cc
Confidence 53
No 366
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=24.42 E-value=4.5e+02 Score=23.81 Aligned_cols=85 Identities=11% Similarity=0.008 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCCh---hhHHHHHhhcCceEEEe
Q 048242 49 QQTYQRCRRLASALSQL--SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNP---LNVAIILGHAEAALVFV 123 (430)
Q Consensus 49 ~el~~~~~~la~~L~~~--gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~---~~l~~~l~~~~~~~vi~ 123 (430)
+.+..+..++-..+.+. .+....+..+...+...++.--+++-..+..-.-=...-++ .++...+++.++++||+
T Consensus 153 ~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 232 (287)
T cd01137 153 AAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVFV 232 (287)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEEE
Confidence 33444444444444332 23333455666677778887777666655321110122334 34666678899999999
Q ss_pred ccccHHHHHH
Q 048242 124 DQQYFALAEE 133 (430)
Q Consensus 124 ~~~~~~~~~~ 133 (430)
+........+
T Consensus 233 e~~~~~~~~~ 242 (287)
T cd01137 233 ESTVNDRLMK 242 (287)
T ss_pred eCCCChHHHH
Confidence 8876554433
No 367
>PRK07048 serine/threonine dehydratase; Validated
Probab=24.41 E-value=5.6e+02 Score=23.60 Aligned_cols=53 Identities=9% Similarity=-0.021 Sum_probs=43.8
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecccc
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
+....+.....+-++|...|.-+..+-|...++.....++..++++++++...
T Consensus 76 v~aSsGN~g~alA~~a~~~G~~~~vvvp~~~~~~k~~~~~~~GAeV~~~~~~~ 128 (321)
T PRK07048 76 VTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGGEVVTYDRYT 128 (321)
T ss_pred EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 44556778888889999999888877777777788889999999999998653
No 368
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=24.36 E-value=1.6e+02 Score=26.68 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=44.2
Q ss_pred eeeeHHHHHHH-----HH-HHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 44 KHYTWQQTYQR-----CR-RLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 44 ~~~Ty~el~~~-----~~-~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..+.|.++.+. +. .++..+...|+.+++.|+++|..+.......||+-.+|....
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 57889988882 23 334444478999999999999999999999999999987655
No 369
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=24.22 E-value=2.1e+02 Score=20.08 Aligned_cols=40 Identities=13% Similarity=0.099 Sum_probs=28.4
Q ss_pred HHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 57 RLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 57 ~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
.+...+...++.+++.|.+++.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3444555667888888999988777776666666677754
No 370
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=24.19 E-value=4.8e+02 Score=23.25 Aligned_cols=78 Identities=12% Similarity=-0.014 Sum_probs=45.6
Q ss_pred eeeeHHHHHHHHHHH---HHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe-eeeccccCChhhHHHHHhhcCce
Q 048242 44 KHYTWQQTYQRCRRL---ASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV-LNCINFRLNPLNVAIILGHAEAA 119 (430)
Q Consensus 44 ~~~Ty~el~~~~~~l---a~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~-~~~l~~~~~~~~l~~~l~~~~~~ 119 (430)
..+++.+........ .+.+.+.+..+|+.|+|+..-..-.+++++|- ..|+. ++.++ .+++ -..++++.+++
T Consensus 92 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~--~~~~-r~~~a~~~Ga~ 167 (280)
T TIGR03366 92 DDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAAD--PSPD-RRELALSFGAT 167 (280)
T ss_pred CCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEC--CCHH-HHHHHHHcCCc
Confidence 346665544333222 22344556779999999976556666666664 45875 44443 2333 34567778887
Q ss_pred EEEecc
Q 048242 120 LVFVDQ 125 (430)
Q Consensus 120 ~vi~~~ 125 (430)
.++...
T Consensus 168 ~~i~~~ 173 (280)
T TIGR03366 168 ALAEPE 173 (280)
T ss_pred EecCch
Confidence 776543
No 371
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=24.17 E-value=6.3e+02 Score=24.05 Aligned_cols=107 Identities=8% Similarity=0.014 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHhhCCCcceEEEC---------CeeeeHHHHHHHHHHHHHHHHHcCCCC--CCeEEEEcCCch--hHHH
Q 048242 19 ALTPLWFLERAATVHPTRKSVVYE---------SKHYTWQQTYQRCRRLASALSQLSIGP--GTAVSVLSPNVP--AMYE 85 (430)
Q Consensus 19 ~~t~~~~l~~~~~~~p~~~a~~~~---------~~~~Ty~el~~~~~~la~~L~~~gv~~--g~~V~i~~~n~~--~~~~ 85 (430)
..++.+.++=..+.+-+..+++.. ...+|++.+...+..+++.+ ++.. .+++..++|-.. -+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 345666666454444444555442 26789999998888777765 4433 356766666553 2334
Q ss_pred HHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHH
Q 048242 86 VHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALA 131 (430)
Q Consensus 86 ~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 131 (430)
.++..+..|+.++... ..++..+-..++.. .+++.....+..+
T Consensus 156 ~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLA-AAPASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHHCCCeEEecC-CCChHHHHHhhccC--CEEEECcHHHHHH
Confidence 4566677888877664 34554444444432 4666666555544
No 372
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=23.99 E-value=7.8e+02 Score=25.08 Aligned_cols=74 Identities=16% Similarity=0.062 Sum_probs=46.4
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhH----HHHHHHhhhcCC-ee-eeccc------cCChhhHHHHH
Q 048242 46 YTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAM----YEVHFGVPMTGA-VL-NCINF------RLNPLNVAIIL 113 (430)
Q Consensus 46 ~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~----~~~~lA~~~~G~-~~-~~l~~------~~~~~~l~~~l 113 (430)
....++...+++++..+. .+..|.|+.....+- .+...++-+.|+ .+ ..++. ..+...+..+.
T Consensus 50 ~~l~~m~~a~~ri~~ai~-----~~e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~ 124 (575)
T PRK11070 50 QQLSGIEKAVELLYNALR-----EGTRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAH 124 (575)
T ss_pred HHhhCHHHHHHHHHHHHH-----CCCEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHH
Confidence 445666677777666654 456899998776543 344556667787 23 33332 56667777665
Q ss_pred hhcCceEEEecc
Q 048242 114 GHAEAALVFVDQ 125 (430)
Q Consensus 114 ~~~~~~~vi~~~ 125 (430)
+ .++++||+.+
T Consensus 125 ~-~~~~LiItvD 135 (575)
T PRK11070 125 A-RGAQLIVTVD 135 (575)
T ss_pred h-cCCCEEEEEc
Confidence 5 4778888765
No 373
>PRK08206 diaminopropionate ammonia-lyase; Provisional
Probab=23.94 E-value=4.2e+02 Score=25.46 Aligned_cols=62 Identities=10% Similarity=-0.069 Sum_probs=46.6
Q ss_pred EEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHHHHHH
Q 048242 73 VSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFALAEEA 134 (430)
Q Consensus 73 V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~ 134 (430)
+.+....+-.-..+.++|.+.|.-+..+-|...+......++..+++++++..........+
T Consensus 118 ~vv~aSsGN~g~alA~~a~~~G~~~~Ivvp~~~~~~k~~~i~~~GA~Vi~v~~~~~~~~~~a 179 (399)
T PRK08206 118 TFATATDGNHGRGVAWAAQQLGQKAVIYMPKGSSEERVDAIRALGAECIITDGNYDDSVRLA 179 (399)
T ss_pred EEEEeCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHHHHHHHH
Confidence 34566777777888889999998888777776666667778999999999987544433333
No 374
>PRK08246 threonine dehydratase; Provisional
Probab=23.66 E-value=5.7e+02 Score=23.42 Aligned_cols=61 Identities=20% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHHH
Q 048242 69 PGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFAL 130 (430)
Q Consensus 69 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 130 (430)
+++.| +....+..-..+-++|.+.|.-+..+-|...++.....++..++++++++......
T Consensus 67 ~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 127 (310)
T PRK08246 67 PAAGV-VAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYADA 127 (310)
T ss_pred cCCeE-EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHHHH
Confidence 44544 44555777788888899999888777777777777889999999999998754433
No 375
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=23.61 E-value=4.9e+02 Score=24.08 Aligned_cols=86 Identities=12% Similarity=0.044 Sum_probs=52.4
Q ss_pred HHHhhCCCcceEEECC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch-hHHHHHHHhhhcCCee
Q 048242 28 RAATVHPTRKSVVYES---------KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP-AMYEVHFGVPMTGAVL 97 (430)
Q Consensus 28 ~~~~~~p~~~a~~~~~---------~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~ 97 (430)
......++.++++... ..+|++.+..........+ ...++....+|... ..+..++..+..|+..
T Consensus 28 ~~~~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~ 102 (358)
T PRK07824 28 RVGEPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-----GGPGQWLLALPAHHIAGLQVLVRSVIAGSEP 102 (358)
T ss_pred hcCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-----CCCCeEEEECChHHHHHHHHHHHHHHcCCeE
Confidence 3334556677777532 5789888877666554433 22345555554322 2234456667778877
Q ss_pred ee--ccccCChhhHHHHHhhcCc
Q 048242 98 NC--INFRLNPLNVAIILGHAEA 118 (430)
Q Consensus 98 ~~--l~~~~~~~~l~~~l~~~~~ 118 (430)
+. ..+...+..+...+++.+.
T Consensus 103 v~~~~~~~~~~~~~~~~i~~~~~ 125 (358)
T PRK07824 103 VELDVSAGFDPTALPRAVAELGG 125 (358)
T ss_pred EecCcCCCcCHHHHHHHHHHhCC
Confidence 66 4456677888888888874
No 376
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=23.58 E-value=2.6e+02 Score=22.64 Aligned_cols=36 Identities=17% Similarity=0.129 Sum_probs=25.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCch
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVP 81 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~ 81 (430)
.-+||.|+.+.++++|..+.+.| + -+.|.-++..+.
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~-~-~d~vvgv~~GG~ 43 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG-Q-WKGIIAVTRGGL 43 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC-C-CCEEEEEecCCe
Confidence 45899999999999999998765 2 244444444443
No 377
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=23.42 E-value=63 Score=32.76 Aligned_cols=30 Identities=13% Similarity=-0.109 Sum_probs=24.0
Q ss_pred CCCCeeEEEeCCCCCC-CCceEEechHHHHH
Q 048242 193 DEWQSIALGYTSGTTA-NPKGVLVSHRAAYL 222 (430)
Q Consensus 193 ~~~~~~~i~~TSGttG-~pK~v~~t~~~l~~ 222 (430)
.+..+.+...|||||| ++|-+.+|++.+-.
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 3556667888999997 59999999987643
No 378
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=23.32 E-value=3.1e+02 Score=20.38 Aligned_cols=48 Identities=4% Similarity=-0.068 Sum_probs=32.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeee
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLN 98 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~ 98 (430)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+.+.|..-+
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v 88 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHA 88 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeE
Confidence 4567766543 34444555566789999888777777777778886544
No 379
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=23.29 E-value=4e+02 Score=25.37 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=10.4
Q ss_pred HhcCc-EEEeeecCcccc
Q 048242 331 SQKGF-RVTHVYGLSEIN 347 (430)
Q Consensus 331 ~~~~~-~v~~~YG~tE~~ 347 (430)
..+.. .+-..+|-.|+-
T Consensus 315 ~~l~~~~~~~s~G~~~sl 332 (382)
T TIGR02080 315 GGLSLFTLAESLGGVESL 332 (382)
T ss_pred HcCCcceEeccCCCCcce
Confidence 34443 456678888874
No 380
>PRK06815 hypothetical protein; Provisional
Probab=22.88 E-value=6e+02 Score=23.36 Aligned_cols=55 Identities=5% Similarity=-0.048 Sum_probs=42.8
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+......-++|...|.-+..+-|...+......++..++++++++.+...
T Consensus 72 v~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~ 126 (317)
T PRK06815 72 ITASSGNHGQGVALAAKLAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGGDALN 126 (317)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHH
Confidence 4456677778888888999988777767666667788899999999999876443
No 381
>PRK07868 acyl-CoA synthetase; Validated
Probab=22.84 E-value=5.7e+02 Score=28.10 Aligned_cols=81 Identities=19% Similarity=0.160 Sum_probs=57.4
Q ss_pred EechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEEEeCCCCHHHHHHHHHhhCceEEeec
Q 048242 214 LVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSVMLRQASAKAIYKAIAEHGVTNFCAA 290 (430)
Q Consensus 214 ~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v~~~~~~~~~~~~~l~~~~vt~~~~~ 290 (430)
.+|+..+...+..+.. ..++..+|++...++..- ..+...+.++..|+..+.+... ..+...+++.++..++..
T Consensus 472 ~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~-e~v~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li~~ 548 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRP-SALVAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEIITD 548 (994)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH-HHHHHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEEEC
Confidence 5788888766555444 347889999988887633 2244566777788888888642 467778888899998887
Q ss_pred cHHHHHH
Q 048242 291 PIVLNSI 297 (430)
Q Consensus 291 p~~l~~l 297 (430)
+..+..+
T Consensus 549 ~~~~~~~ 555 (994)
T PRK07868 549 PTNLEAA 555 (994)
T ss_pred hHHHHHH
Confidence 7665544
No 382
>PRK06145 acyl-CoA synthetase; Validated
Probab=22.73 E-value=7.2e+02 Score=24.20 Aligned_cols=84 Identities=10% Similarity=0.082 Sum_probs=57.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchh--HHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEE
Q 048242 44 KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPA--MYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALV 121 (430)
Q Consensus 44 ~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~v 121 (430)
..+|++.+...+.. .....++..++++....|-... +....++.+..|+..+.. +...+..+...+++.++.++
T Consensus 167 v~~s~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSID---HVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHHH---HHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 67888888654432 3344588899988777664322 223345666777776554 56778889999999999998
Q ss_pred EeccccHHHH
Q 048242 122 FVDQQYFALA 131 (430)
Q Consensus 122 i~~~~~~~~~ 131 (430)
+.....+..+
T Consensus 243 ~~~P~~~~~l 252 (497)
T PRK06145 243 WMAPVMLSRV 252 (497)
T ss_pred EehHHHHHHH
Confidence 8877655443
No 383
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=22.72 E-value=8.8e+02 Score=25.24 Aligned_cols=140 Identities=12% Similarity=0.046 Sum_probs=86.7
Q ss_pred CCCeeEEEeCCCCCCCCceEEechHHHHHHHHHHHh---hcCCCCCCEEEeccCchhhhhhH-HHHHHHhhcceEEE-eC
Q 048242 194 EWQSIALGYTSGTTANPKGVLVSHRAAYLMSLNVVL---TWGMKEGAVYLWTLPIFHGNGWC-FTWSLAALCGTSVM-LR 268 (430)
Q Consensus 194 ~~~~~~i~~TSGttG~pK~v~~t~~~l~~~~~~~~~---~~~~~~~~~~~~~~pl~h~~gl~-~~~~~l~~g~~~v~-~~ 268 (430)
++.+++=...... |.-+-..+|.+.....+..... .+++..+..+-...- +..-|. ...++...|+.+|- ++
T Consensus 89 ~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~--N~pEWiis~~a~~~~~~v~VplYd 165 (691)
T KOG1256|consen 89 GNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAF--NRPEWIISEMACYAYSLVNVPLYD 165 (691)
T ss_pred CCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEecc--CChhhHHhHHHHHhcCCEEeeccc
Confidence 3445554433333 5566778888877655554443 456665554433221 223333 34445555554444 37
Q ss_pred CCCHHHHHHHHHhhCceEEeec-cHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCHHHHHHHHhcCcEEEee
Q 048242 269 QASAKAIYKAIAEHGVTNFCAA-PIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPPPILLAMSQKGFRVTHV 340 (430)
Q Consensus 269 ~~~~~~~~~~l~~~~vt~~~~~-p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~v~~~ 340 (430)
...++.....+.+-.+.+++.- +..++.|++...... +++||.++.-.++ +.++.++..+.|++++..
T Consensus 166 Tlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~---~~~LK~iI~~~~~-~~~~~~~~~~~gv~v~S~ 234 (691)
T KOG1256|consen 166 TLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDS---LPSLKAIIQLDEP-SDELKEKAENNGVEVYSW 234 (691)
T ss_pred CCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhccccc---CccceeEEEecCC-chhhhhhhhcCCeEEEEH
Confidence 7899999999999999999887 999999998765422 6789988875543 344444455556665544
No 384
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.60 E-value=5.8e+02 Score=24.63 Aligned_cols=100 Identities=16% Similarity=0.146 Sum_probs=57.0
Q ss_pred echHHHHHHHHHHH---hhcCCCCCCEEEeccCchhhhhhHH-HHHHHhhcceEEEe-CCCCHHHHHHHHHhhCceEEe-
Q 048242 215 VSHRAAYLMSLNVV---LTWGMKEGAVYLWTLPIFHGNGWCF-TWSLAALCGTSVML-RQASAKAIYKAIAEHGVTNFC- 288 (430)
Q Consensus 215 ~t~~~l~~~~~~~~---~~~~~~~~~~~~~~~pl~h~~gl~~-~~~~l~~g~~~v~~-~~~~~~~~~~~l~~~~vt~~~- 288 (430)
+|+..|...+..+. ...+++.+|+++.-+|..- .|.. ++..+-.|..-|+. +.-...++-...+...++.+.
T Consensus 54 ~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~--ef~~~~FALlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~ 131 (542)
T COG1021 54 LSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVA--EFYITFFALLRLGVAPVLALPSHRASELGAFASQIEAALLIV 131 (542)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchH--HHHHHHHHHHHcCcchhhccchhhHHHHHHHHHhhcchheee
Confidence 78888766655443 4568999999999998633 3443 34444456554444 333334444444444444333
Q ss_pred -------eccHHHHHHHcCCCCCCCCCCCceeEEeecCCCCCH
Q 048242 289 -------AAPIVLNSIVNAPPEDTILPLPHVVNVNTGGSPPPP 324 (430)
Q Consensus 289 -------~~p~~l~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~ 324 (430)
-.-.+.+.++.. .++||.+++.|+.=.+
T Consensus 132 ~~~~~gFd~~~~ar~~~a~--------~~tlr~v~v~ge~~~~ 166 (542)
T COG1021 132 ARQHSGFDYRPFARELVAK--------HPTLRHVIVAGEAEHP 166 (542)
T ss_pred chhhcccCcHHHHHHHHhh--------CCcceEEEEccCCCCc
Confidence 222233333322 6789999998887533
No 385
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=22.54 E-value=1.6e+02 Score=25.06 Aligned_cols=55 Identities=24% Similarity=0.222 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHH-HcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccc
Q 048242 51 TYQRCRRLASALS-QLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQ 126 (430)
Q Consensus 51 l~~~~~~la~~L~-~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 126 (430)
..+|.+-++..++ +++++++|+..++..+ |..++|+ ++....++-++++|.++.-
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSnS--------------GrNpvpi-------e~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISNS--------------GRNPVPI-------EVAEYAREKGAKVIAVTSL 140 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeCC--------------CCCCcch-------HHHHHHHhcCCeEEEEehh
Confidence 3567777888776 5699999976666543 4444554 3666778889998887663
No 386
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=22.12 E-value=2.5e+02 Score=21.21 Aligned_cols=26 Identities=15% Similarity=0.070 Sum_probs=22.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCC
Q 048242 45 HYTWQQTYQRCRRLASALSQLSIGPG 70 (430)
Q Consensus 45 ~~Ty~el~~~~~~la~~L~~~gv~~g 70 (430)
.++|.++.+.++.+|..|.+.+....
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~ 29 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFD 29 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCC
Confidence 57999999999999999998876543
No 387
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=21.96 E-value=2e+02 Score=25.93 Aligned_cols=43 Identities=14% Similarity=0.124 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHcCCCCCCeEEEEcCCchh-HHHHHHHhhhcCCe
Q 048242 54 RCRRLASALSQLSIGPGTAVSVLSPNVPA-MYEVHFGVPMTGAV 96 (430)
Q Consensus 54 ~~~~la~~L~~~gv~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~ 96 (430)
..+.+...|.+.|+.+++.|.+++..+.. ...+.+.+...|.-
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~ 114 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVE 114 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCC
Confidence 35788889999999999999999886543 23344556667754
No 388
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=21.82 E-value=4e+02 Score=20.86 Aligned_cols=87 Identities=15% Similarity=0.132 Sum_probs=50.1
Q ss_pred hhhhhhHHHHHHHhhcceEEEe-C-CCCHHHHHHHHHhhCceEEeecc------HHHHHHHcCCCCCCCCCCCceeEEee
Q 048242 246 FHGNGWCFTWSLAALCGTSVML-R-QASAKAIYKAIAEHGVTNFCAAP------IVLNSIVNAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 246 ~h~~gl~~~~~~l~~g~~~v~~-~-~~~~~~~~~~l~~~~vt~~~~~p------~~l~~l~~~~~~~~~~~l~~lr~v~~ 317 (430)
.|.-|-...-..+-..+--|+. . ...++.+++...++++..+..+. ..+..+.+..+... +..++ ++.
T Consensus 11 ~HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~g---l~~v~-viv 86 (128)
T cd02072 11 CHAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAG---LKDIL-LYV 86 (128)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCC---CCCCe-EEE
Confidence 5777776655555544444444 3 45789999999999998776433 12333433332221 43433 555
Q ss_pred cCCC-CCHHHH----HHHHhcCcE
Q 048242 318 GGSP-PPPPIL----LAMSQKGFR 336 (430)
Q Consensus 318 ~G~~-l~~~~~----~~~~~~~~~ 336 (430)
||.. ++++.+ .++++.|+.
T Consensus 87 GG~~~i~~~d~~~~~~~L~~~Gv~ 110 (128)
T cd02072 87 GGNLVVGKQDFEDVEKRFKEMGFD 110 (128)
T ss_pred ECCCCCChhhhHHHHHHHHHcCCC
Confidence 6654 465554 557776653
No 389
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=21.75 E-value=3.1e+02 Score=19.58 Aligned_cols=68 Identities=15% Similarity=0.139 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCeEEEE-cCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEE
Q 048242 52 YQRCRRLASALSQLSIGPGTAVSVL-SPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVF 122 (430)
Q Consensus 52 ~~~~~~la~~L~~~gv~~g~~V~i~-~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi 122 (430)
++-+.+++..+...+ .-+.|.|. ..+-++.+.+---+.+.++..++++ +.-++.....++..+++-++
T Consensus 9 yeTs~~va~~~~~~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~~v~ 77 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIKKVY 77 (92)
T ss_pred HHHHHHHHHHhcccC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCCEEE
Confidence 445556666654432 33444444 4444554444444444577777777 44446666667666544443
No 390
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=21.56 E-value=3.1e+02 Score=22.65 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=37.1
Q ss_pred eeeeHHHHHHHHHH--HHHHHHHcCCCCCCeEEEEcCCchhHHH--HHHHhhhcCCeeeec---cccCChhhHHHHHhhc
Q 048242 44 KHYTWQQTYQRCRR--LASALSQLSIGPGTAVSVLSPNVPAMYE--VHFGVPMTGAVLNCI---NFRLNPLNVAIILGHA 116 (430)
Q Consensus 44 ~~~Ty~el~~~~~~--la~~L~~~gv~~g~~V~i~~~n~~~~~~--~~lA~~~~G~~~~~l---~~~~~~~~l~~~l~~~ 116 (430)
.++.|.+-.--..+ +.-.|.+.+ ..+..|+++.|...-... ...|+-.-. ++.| .|......+++.|+.-
T Consensus 33 sEl~~~~~~pg~~elLLlP~L~~Ls-~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~r--vlli~~~~~~d~lwa~EQaLrSG 109 (168)
T TIGR00623 33 SEVVYREDQPMMAQLLLLPLLQQLG-QQSRWQLWLTPQQKLSKEWVQSSGLPLTK--VMQISQLSPCNTVESMIRALRTG 109 (168)
T ss_pred eEEeecCCCchhHHHHHHHHHHHhc-ccCceEEEECCCCccCHHHHHHcCCChhH--EEEEecCCchhHHHHHHHHHHhC
Confidence 44555443222222 444444444 234567777766442211 222222222 2233 3333445677778888
Q ss_pred CceEEEe
Q 048242 117 EAALVFV 123 (430)
Q Consensus 117 ~~~~vi~ 123 (430)
.+..|++
T Consensus 110 ~c~aVL~ 116 (168)
T TIGR00623 110 NYSVVIG 116 (168)
T ss_pred CCcEEEe
Confidence 8888887
No 391
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=21.55 E-value=1.8e+02 Score=29.80 Aligned_cols=42 Identities=14% Similarity=0.042 Sum_probs=35.7
Q ss_pred HHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCe
Q 048242 55 CRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAV 96 (430)
Q Consensus 55 ~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 96 (430)
.+.+...+.+.|+.+++.|.++|..+.....+++++-.+|..
T Consensus 208 ~~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 208 RQDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 356777788889999999999999998888888888888975
No 392
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=21.34 E-value=4.2e+02 Score=25.22 Aligned_cols=17 Identities=12% Similarity=-0.001 Sum_probs=10.3
Q ss_pred hcCc-EEEeeecCccccc
Q 048242 332 QKGF-RVTHVYGLSEING 348 (430)
Q Consensus 332 ~~~~-~v~~~YG~tE~~~ 348 (430)
++.. .+-..+|..|+-.
T Consensus 319 ~l~l~~~~~s~G~~~sl~ 336 (385)
T PRK08574 319 SLKLIKPSPSLGGVESLA 336 (385)
T ss_pred cCCcceEccCCCCCccee
Confidence 4433 3566788888743
No 393
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=21.30 E-value=1.9e+02 Score=26.73 Aligned_cols=41 Identities=22% Similarity=0.139 Sum_probs=30.5
Q ss_pred HHHHHHHHHcCCCCCCeEEEEcCCchhH-HHHHHHhhhcCCe
Q 048242 56 RRLASALSQLSIGPGTAVSVLSPNVPAM-YEVHFGVPMTGAV 96 (430)
Q Consensus 56 ~~la~~L~~~gv~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~ 96 (430)
+.++..|.+.|+.+++.|++++.++..+ ..+.+.+..+|.-
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~ 130 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHE 130 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCC
Confidence 6788889999999999999998776443 3444666667753
No 394
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=21.15 E-value=6.2e+02 Score=22.87 Aligned_cols=86 Identities=15% Similarity=0.188 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccc--cCChh---hHHHHHhhcCceEEE
Q 048242 48 WQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINF--RLNPL---NVAIILGHAEAALVF 122 (430)
Q Consensus 48 y~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~--~~~~~---~l~~~l~~~~~~~vi 122 (430)
++++.++.+.+-..+.+.--....+..+...+...++.--+++-..+.. -+.+ ..++. ++...+++.++++||
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~If 233 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVF--TIDPEIDPGAKRLAKIRKEIKEKGATCVF 233 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeee--cCCCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 3444444444444444321112244556666677777777666444321 1222 23344 466667889999999
Q ss_pred eccccHHHHHHHH
Q 048242 123 VDQQYFALAEEAL 135 (430)
Q Consensus 123 ~~~~~~~~~~~~~ 135 (430)
++........+.+
T Consensus 234 ~e~~~~~~~~~~i 246 (286)
T cd01019 234 AEPQFHPKIAETL 246 (286)
T ss_pred ecCCCChHHHHHH
Confidence 9887655444433
No 395
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=21.15 E-value=6.5e+02 Score=23.09 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=68.3
Q ss_pred HHHHhhcCCCCCCEEEeccCchhhhhhHHHHHHHhhcceEE-Ee-CCCCHHHHHHHHHhhCceEEeeccHHHHHHHcCCC
Q 048242 225 LNVVLTWGMKEGAVYLWTLPIFHGNGWCFTWSLAALCGTSV-ML-RQASAKAIYKAIAEHGVTNFCAAPIVLNSIVNAPP 302 (430)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~pl~h~~gl~~~~~~l~~g~~~v-~~-~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~~~~~ 302 (430)
+.+.+...+.++|.+......+- .|....-.+-..|-..+ +. ++.+.+++.+.|+.+..|..+.-..+..+=.....
T Consensus 150 rmL~dfv~L~~GD~vIQNganS~-VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~ 228 (354)
T KOG0025|consen 150 RMLKDFVQLNKGDSVIQNGANSG-VGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFK 228 (354)
T ss_pred HHHHHHHhcCCCCeeeecCcccH-HHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhh
Confidence 34445567888997776665543 44554445545554433 33 56899999999999999999876554433222111
Q ss_pred CCCCCCCCceeEEe-ecCCCCCHHHHHHHHhcCcEEEeeec
Q 048242 303 EDTILPLPHVVNVN-TGGSPPPPPILLAMSQKGFRVTHVYG 342 (430)
Q Consensus 303 ~~~~~~l~~lr~v~-~~G~~l~~~~~~~~~~~~~~v~~~YG 342 (430)
.+ ++..|..+ +.|+.-..++.+.+.+-|+-+ .||
T Consensus 229 ---~~-~~~prLalNcVGGksa~~iar~L~~Ggtmv--TYG 263 (354)
T KOG0025|consen 229 ---GD-NPRPRLALNCVGGKSATEIARYLERGGTMV--TYG 263 (354)
T ss_pred ---cc-CCCceEEEeccCchhHHHHHHHHhcCceEE--Eec
Confidence 12 56666544 456677777777777544443 454
No 396
>PRK07334 threonine dehydratase; Provisional
Probab=21.12 E-value=4.4e+02 Score=25.28 Aligned_cols=55 Identities=11% Similarity=-0.012 Sum_probs=43.6
Q ss_pred EEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 75 VLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 75 i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
+....+..-..+.++|...|..+..+-|...++.....++..++++++++..+..
T Consensus 75 v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~~~~ 129 (403)
T PRK07334 75 IAMSAGNHAQGVAYHAQRLGIPATIVMPRFTPTVKVERTRGFGAEVVLHGETLDE 129 (403)
T ss_pred EEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECcCHHH
Confidence 4456677778888899999998888877766677778899999999999765433
No 397
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=20.99 E-value=5e+02 Score=24.22 Aligned_cols=76 Identities=12% Similarity=-0.037 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCc-hhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEecc
Q 048242 48 WQQTYQRCRRLASALSQLSIGPGTAVSVLSPNV-PAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQ 125 (430)
Q Consensus 48 y~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~-~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~ 125 (430)
|.+..+++.+....|. |..++..+.++.+++ ..+..++.++..-|..++...+..-...+....+..+.+++.+..
T Consensus 35 ~~~~~~~~~~~l~~l~--~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~ 111 (368)
T PRK13479 35 FNALTASVRAKLVAIA--TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDT 111 (368)
T ss_pred HHHHHHHHHHHHHHHh--CCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHHHHHHHHHcCCcEEEEEC
Confidence 5444444433333332 454444545555554 455666666666665555444444444445677778888777654
No 398
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=20.94 E-value=3.2e+02 Score=19.41 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 50 QTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 50 el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
++.+.++.-++.|..-|+.|. |.++.+--.+++.. -.+..- ..-.+.+++.+.+.|++|+.++.
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~--~~l~~~------------~lkvy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSE--EVLEVS------------GLKVYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH-----EET------------TEEEEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHH--HHHHhh------------CceEEEHHhcCCceEEEchHHhc
Confidence 456778889999999999886 77887766666544 111110 11123478889999999887654
Q ss_pred H
Q 048242 130 L 130 (430)
Q Consensus 130 ~ 130 (430)
.
T Consensus 73 ~ 73 (85)
T PF08967_consen 73 Q 73 (85)
T ss_dssp T
T ss_pred c
Confidence 3
No 399
>PRK11823 DNA repair protein RadA; Provisional
Probab=20.65 E-value=8e+02 Score=24.00 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=51.8
Q ss_pred cCCCCCCeEEEEcCCch--hHHHHHHHhhh--cCCeeeeccccCChhhHHHHHhhcCc---eEEEeccccHHHHHHHHHH
Q 048242 65 LSIGPGTAVSVLSPNVP--AMYEVHFGVPM--TGAVLNCINFRLNPLNVAIILGHAEA---ALVFVDQQYFALAEEALKI 137 (430)
Q Consensus 65 ~gv~~g~~V~i~~~n~~--~~~~~~lA~~~--~G~~~~~l~~~~~~~~l~~~l~~~~~---~~vi~~~~~~~~~~~~~~~ 137 (430)
-|+.+|+.+.|..+.+. ..++.++|... .|..++.++...+.+++....+..+. ++.+......+.+.+....
T Consensus 75 GGi~~Gs~~lI~G~pG~GKTtL~lq~a~~~a~~g~~vlYvs~Ees~~qi~~ra~rlg~~~~~l~~~~e~~l~~i~~~i~~ 154 (446)
T PRK11823 75 GGLVPGSVVLIGGDPGIGKSTLLLQVAARLAAAGGKVLYVSGEESASQIKLRAERLGLPSDNLYLLAETNLEAILATIEE 154 (446)
T ss_pred CCccCCEEEEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEEccccHHHHHHHHHHcCCChhcEEEeCCCCHHHHHHHHHh
Confidence 38999999999988865 45555555443 37777888877777777665555543 2344444444444333322
Q ss_pred hhccCCCCCCCCeEEEecCCC
Q 048242 138 MEGKSEGLFKPPVLIVIGDET 158 (430)
Q Consensus 138 ~~~~~~~~~~~~~~i~~~~~~ 158 (430)
....++++|..+
T Consensus 155 ---------~~~~lVVIDSIq 166 (446)
T PRK11823 155 ---------EKPDLVVIDSIQ 166 (446)
T ss_pred ---------hCCCEEEEechh
Confidence 235567777654
No 400
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=20.48 E-value=2.9e+02 Score=25.17 Aligned_cols=64 Identities=16% Similarity=0.004 Sum_probs=47.9
Q ss_pred CCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeee-ccccCChhhHHHHHhhcCceEEEeccccHH
Q 048242 66 SIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNC-INFRLNPLNVAIILGHAEAALVFVDQQYFA 129 (430)
Q Consensus 66 gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~-l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 129 (430)
.+++||.|+--..||.---.++-=|-..|.--+- +......+++...|+..++.-||++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 5788999888888887665555555566765443 344556789999999999999999987653
No 401
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=20.24 E-value=7.9e+02 Score=23.77 Aligned_cols=70 Identities=9% Similarity=-0.075 Sum_probs=51.1
Q ss_pred HHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeec--cccCChhhHHHHHhhcCceEEEecccc
Q 048242 58 LASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCI--NFRLNPLNVAIILGHAEAALVFVDQQY 127 (430)
Q Consensus 58 la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l--~~~~~~~~l~~~l~~~~~~~vi~~~~~ 127 (430)
+...+.+..--+|-+|+.++.=.++..+.+..+...|+-+..- ||..+.++....|.+.+..+.-...+.
T Consensus 24 ~~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a~~~~~ 95 (413)
T cd00401 24 IREEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGET 95 (413)
T ss_pred HHHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEEEcCCC
Confidence 3444443333467899999999999999888888889865433 566677888888888888876654443
No 402
>COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster [General function prediction only]
Probab=20.22 E-value=5.5e+02 Score=27.64 Aligned_cols=54 Identities=13% Similarity=0.028 Sum_probs=38.0
Q ss_pred eEEEeCCCCHHHHHHHHHhhCceEEeeccHHHHHHH-cCCCCCCCCCCCceeEEee
Q 048242 263 TSVMLRQASAKAIYKAIAEHGVTNFCAAPIVLNSIV-NAPPEDTILPLPHVVNVNT 317 (430)
Q Consensus 263 ~~v~~~~~~~~~~~~~l~~~~vt~~~~~p~~l~~l~-~~~~~~~~~~l~~lr~v~~ 317 (430)
....++...+..--+.+.+.++.++++.|.|++.++ +........ ++.||++++
T Consensus 147 ~~~~y~Gdt~~~~r~~~~~~pp~IllTNpdMLh~~llr~~~~~~~~-~~~Lk~lVv 201 (851)
T COG1205 147 TFGRYTGDTPPEERRAIIRNPPDILLTNPDMLHYLLLRNHDAWLWL-LRNLKYLVV 201 (851)
T ss_pred eeeeecCCCChHHHHHHHhCCCCEEEeCHHHHHHHhccCcchHHHH-HhcCcEEEE
Confidence 444445555555566889999999999999999944 443333333 678898886
No 403
>PRK06260 threonine synthase; Validated
Probab=20.18 E-value=5.7e+02 Score=24.46 Aligned_cols=88 Identities=10% Similarity=-0.077 Sum_probs=49.3
Q ss_pred cceEEECC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeeccccC-ChhhHHHH
Q 048242 36 RKSVVYES--KHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCINFRL-NPLNVAII 112 (430)
Q Consensus 36 ~~a~~~~~--~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~~~~-~~~~l~~~ 112 (430)
+..+-.++ -+-||++--. ..+.....+.|. +.| +....+.....+...+.+.|.-+..+-|.. .+......
T Consensus 84 ~l~~K~E~~nPTGSfKdRga--~~~v~~a~~~g~---~~v-v~aSsGN~g~alA~~aa~~G~~~~i~vP~~~~~~~k~~~ 157 (397)
T PRK06260 84 ELYVKHEGANPTGSFKDRGM--TVGVTKALELGV---KTV-ACASTGNTSASLAAYAARAGLKCYVLLPAGKVALGKLAQ 157 (397)
T ss_pred cEEEEeCCCCCCcCcHHHHH--HHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEEeCCCccHHHHHH
Confidence 45555543 3444444321 222223344453 233 344555555555566778888777766654 34444445
Q ss_pred HhhcCceEEEeccccHH
Q 048242 113 LGHAEAALVFVDQQYFA 129 (430)
Q Consensus 113 l~~~~~~~vi~~~~~~~ 129 (430)
++..+++++.++..+.+
T Consensus 158 ~~~~GA~vi~v~~~~~~ 174 (397)
T PRK06260 158 ALLHGAKVLEVDGNFDD 174 (397)
T ss_pred HHhcCCEEEEECCcHHH
Confidence 77899999999876444
No 404
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=20.09 E-value=7.9e+02 Score=23.66 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=60.5
Q ss_pred HHHHHHHHHhhCCCcceEEECCeeeeHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCchhHHHHHHHhhhcCCeeeecc
Q 048242 22 PLWFLERAATVHPTRKSVVYESKHYTWQQTYQRCRRLASALSQLSIGPGTAVSVLSPNVPAMYEVHFGVPMTGAVLNCIN 101 (430)
Q Consensus 22 ~~~~l~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~gv~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~~~l~ 101 (430)
..+++.++++.-.+.+....+.+.+-+-||.+...+.-..+...-+.+.+-|.+-..---.+..+++|..-.|--++.+.
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~e 124 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFE 124 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcCCCCEEEEec
Confidence 34455455444444445555556666677766554444444444455666677666655666668999999999999888
Q ss_pred ccCChhhHHHHHhhcCceEEEe
Q 048242 102 FRLNPLNVAIILGHAEAALVFV 123 (430)
Q Consensus 102 ~~~~~~~l~~~l~~~~~~~vi~ 123 (430)
|-+....- .+.-++...+++
T Consensus 125 P~fd~Y~~--~~~maG~tpv~v 144 (420)
T KOG0257|consen 125 PFFDCYIP--QVVMAGGTPVFV 144 (420)
T ss_pred Ccchhhhh--HHhhcCCcceee
Confidence 88766432 233344444444
No 405
>PF07722 Peptidase_C26: Peptidase C26; InterPro: IPR011697 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. These peptidases have gamma-glutamyl hydrolase activity; that is they catalyse the cleavage of the gamma-glutamyl bond in poly-gamma-glutamyl substrates. They are structurally related to IPR000991 from INTERPRO, but contain extensions in four loops and at the C terminus []. They belong to MEROPS peptidase family C26 (gamma-glutamyl hydrolase family), clan PC. The majority of the sequences are classified as unassigned peptidases. ; GO: 0016787 hydrolase activity, 0006541 glutamine metabolic process; PDB: 1L9X_A 3FIJ_D.
Probab=20.03 E-value=99 Score=26.71 Aligned_cols=31 Identities=10% Similarity=0.106 Sum_probs=21.9
Q ss_pred HHHhhhcCCeeeeccccCChhhHHHHHhhcC
Q 048242 87 HFGVPMTGAVLNCINFRLNPLNVAIILGHAE 117 (430)
Q Consensus 87 ~lA~~~~G~~~~~l~~~~~~~~l~~~l~~~~ 117 (430)
.=++.++|+.+++|++..+.+.+..+++.++
T Consensus 30 v~~i~~aG~~pv~ip~~~~~~~~~~~l~~id 60 (217)
T PF07722_consen 30 VKAIEAAGGRPVPIPYDADDEELDELLDRID 60 (217)
T ss_dssp HHHHHHTT-EEEEE-SS--HHHHHHHHHCSS
T ss_pred HHHHHHcCCEEEEEccCCCHHHHHHHHhhcC
Confidence 4456778999999999888899999888765
Done!