Your job contains 1 sequence.
>048244
ADLRRVIKSTGTLLLAFLIGSEGHRNRSVVMVRSQLSNPIISPNDHWGTWTALLVTGAFG
LWSEKTKLGSMVSAALVSTLLGLAASNLGIIPYEAKAYAVFLEFLLPLSIPLLLFRADLR
RIVQSTGILLLAFLLGSVATTVGTLVAFLLVPMRSLGTDSWKIASAFMGSYIGGSINYVA
ISEALGVSPSVLAAGVAADNVITAIYFMILFTLASKIPPEASPANGTEVDKESNSEDKTP
VLQTATALAISFVICKTATYLSNLFGIQGGSLPGVTAIVVILATLLPKQFSYLAPAGDTL
ALVLMQVFFSVVGASGSIWNVINTAPSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIA
SNANVGGPTTACGMATTKGWGSLVVPGILAGIFGISMATFLGLGFGTTVLKHL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 048244
(413 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2149559 - symbol:AT5G52540 species:3702 "Arabi... 1296 3.4e-132 1
TAIR|locus:2178697 - symbol:AT5G24000 species:3702 "Arabi... 1275 5.7e-130 1
UNIPROTKB|Q0C1S6 - symbol:HNE_1609 "Putative membrane pro... 423 1.1e-39 1
UNIPROTKB|Q8EAR8 - symbol:SO_3828 "Uncharacterized protei... 120 1.9e-12 2
TIGR_CMR|SO_3828 - symbol:SO_3828 "conserved hypothetical... 120 1.9e-12 2
GENEDB_PFALCIPARUM|PF13_0172 - symbol:PF13_0172 "hypothet... 112 8.3e-10 2
UNIPROTKB|Q8IE07 - symbol:PF13_0172 "Uncharacterized prot... 112 8.3e-10 2
UNIPROTKB|Q47Y98 - symbol:CPS_3548 "Putative membrane pro... 109 3.1e-09 2
TIGR_CMR|CPS_3548 - symbol:CPS_3548 "putative membrane pr... 109 3.1e-09 2
TIGR_CMR|SO_1120 - symbol:SO_1120 "xanthine/uracil permea... 118 0.00044 1
>TAIR|locus:2149559 [details] [associations]
symbol:AT5G52540 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009941 "chloroplast
envelope" evidence=IDA] EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009941 EMBL:AB025606 InterPro:IPR008537 Pfam:PF05684
UniGene:At.27484 UniGene:At.45864 eggNOG:COG5505
HOGENOM:HOG000220761 EMBL:AY062547 EMBL:BT000759 EMBL:BT001227
IPI:IPI00540482 RefSeq:NP_200067.1 PaxDb:Q9LTG3 PRIDE:Q9LTG3
EnsemblPlants:AT5G52540.1 GeneID:835330 KEGG:ath:AT5G52540
TAIR:At5g52540 InParanoid:Q9LTG3 OMA:GMISASY PhylomeDB:Q9LTG3
ProtClustDB:CLSN2686101 ArrayExpress:Q9LTG3 Genevestigator:Q9LTG3
Uniprot:Q9LTG3
Length = 461
Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
Identities = 261/391 (66%), Positives = 309/391 (79%)
Query: 27 RSVVMVRSQLSNPIISPNDHWGTWTALLVTGAFGLWSEKTKLGSMVSAALVSTLLGLAAS 86
RSV + S LS P+ISPND WGTWTAL TGA GLWSEKTK+G+ +S ALVSTL+GLAAS
Sbjct: 73 RSVTV--SSLSTPLISPNDEWGTWTALFATGALGLWSEKTKVGAAMSGALVSTLVGLAAS 130
Query: 87 NLGIIPYEAKAYAVXXXXXXXXXXXXXXXRADLRRIVQSTGILLLAFLLGSVATTVGTLV 146
NLGII +A A+AV RADLRR+VQSTG LLLAFL+GSVATTVGT +
Sbjct: 131 NLGIISSQAPAFAVVLNFLLPLAVPLLLFRADLRRVVQSTGKLLLAFLIGSVATTVGTAL 190
Query: 147 AFLLVPMRSLGTDSWKIASAFMGSYIGGSINYVAISEALGVSPSVLAAGVAADNVITAIY 206
A+ LVPM+SLG DSWKIA+A MG +IGG++NYVAIS ALGV+PSVLAAG+AADNVI A+Y
Sbjct: 191 AYYLVPMKSLGPDSWKIAAALMGRHIGGAVNYVAISNALGVTPSVLAAGLAADNVICAVY 250
Query: 207 FMILFTLASKIPPEASPANGTEVDKESN--SE--DKTPVLQTATALAISFVICKTATYLS 262
F LF L SKIP EA P T VD E+N SE +K PVL AT +A+S ICK L+
Sbjct: 251 FTTLFALGSKIPAEAVPPPTTIVDAETNEASETKNKIPVLLIATGIAVSLAICKAGALLT 310
Query: 263 NLFGIQGGSLPGVTAIVVILATLLPKQFSYLAPAGDTLALVLMQVFFSVVGASGSIWNVI 322
FGI GGSLP +TA+VVILAT+ P QF LAP+G+ +AL+LMQVFF+VVGASG+IW+VI
Sbjct: 311 KYFGISGGSLPAITAVVVILATVFPSQFGRLAPSGEAMALILMQVFFTVVGASGNIWSVI 370
Query: 323 NTAPSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIASNANVGGPTTACGMATTKGWGS 382
NTAPSIFLFALVQ+ HLA+ILG+GKL + +L+LLL+ASNANVGGPTTA GMAT KGW S
Sbjct: 371 NTAPSIFLFALVQIGTHLAVILGIGKLLNIELRLLLLASNANVGGPTTAAGMATAKGWNS 430
Query: 383 LVVPGILAGIFGISMATFLGLGFGTTVLKHL 413
L+VPGILAGIFGI++ATF+G+ FG VLK +
Sbjct: 431 LIVPGILAGIFGIAIATFIGIAFGVKVLKFM 461
>TAIR|locus:2178697 [details] [associations]
symbol:AT5G24000 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB009056 InterPro:IPR008537
Pfam:PF05684 IPI:IPI00542205 RefSeq:NP_197788.1 UniGene:At.30982
PRIDE:Q9FLW1 EnsemblPlants:AT5G24000.1 GeneID:832465
KEGG:ath:AT5G24000 TAIR:At5g24000 eggNOG:COG5505
HOGENOM:HOG000220761 InParanoid:Q9FLW1 OMA:AMMTGSY PhylomeDB:Q9FLW1
ProtClustDB:CLSN2914862 Genevestigator:Q9FLW1 Uniprot:Q9FLW1
Length = 443
Score = 1275 (453.9 bits), Expect = 5.7e-130, P = 5.7e-130
Identities = 251/389 (64%), Positives = 305/389 (78%)
Query: 27 RSVVMVRSQLSNPIISPNDHWGTWTALLVTGAFGLWSEKTKLGSMVSAALVSTLLGLAAS 86
R V V SQL P+ISP+DHW W AL GAFG+WSEKTK+GSMVS AL STLLGLAAS
Sbjct: 55 RRRVKVYSQLRFPLISPDDHWSQWAALFAAGAFGVWSEKTKIGSMVSGALTSTLLGLAAS 114
Query: 87 NLGIIPYEAKAYAVXXXXXXXXXXXXXXXRADLRRIVQSTGILLLAFLLGSVATTVGTLV 146
NL +IP+E +Y RADLRRI++STG LLLAFL+GSVAT VGT+V
Sbjct: 115 NLRLIPFETPSYGFFMEFLLPHTIPLLLFRADLRRIIRSTGSLLLAFLIGSVATIVGTVV 174
Query: 147 AFLLVPMRSLGTDSWKIASAFMGSYIGGSINYVAISEALGVSPSVLAAGVAADNVITAIY 206
AF+LVPMRSLG D+WKIA+A MGSYIGGS+N+VAISEAL +SPSV+AAGVA DNVI A++
Sbjct: 175 AFMLVPMRSLGPDNWKIAAALMGSYIGGSLNFVAISEALQISPSVIAAGVAVDNVICALH 234
Query: 207 FMILFTLASKIPPEASPANGTEVD--KESNSEDKTPVLQTATALAISFVICKTATYLSNL 264
FM+LF LASKIPPE + A+ + D K+ EDK V+ T+ AL++SF+ICK A L+ L
Sbjct: 235 FMVLFALASKIPPETASASSPDADMTKDDKLEDKNRVVSTSIALSVSFLICKAAITLTTL 294
Query: 265 FGIQGGSLPGVTAIVVILATLLPKQFSYLAPAGDTLALVLMQVFFSVVGASGSIWNVINT 324
F IQG LP VTAI ++LAT P F+ LAP+ +T++L+LMQVFF+++GA+GS+WNVINT
Sbjct: 295 FKIQGVMLPAVTAITIVLATSFPDFFNSLAPSAETISLILMQVFFTILGATGSVWNVINT 354
Query: 325 APSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIASNANVGGPTTACGMATTKGWGSLV 384
APSIFLFA +QV VHLA+ L LGKLF D+KLLL+ASNAN+GGPTTAC MAT KGW SLV
Sbjct: 355 APSIFLFAAIQVMVHLAVTLVLGKLFCIDMKLLLLASNANIGGPTTACAMATAKGWTSLV 414
Query: 385 VPGILAGIFGISMATFLGLGFGTTVLKHL 413
VPGIL+G+FG+S+ATFLG+G G VLK L
Sbjct: 415 VPGILSGVFGVSIATFLGIGCGVFVLKRL 443
>UNIPROTKB|Q0C1S6 [details] [associations]
symbol:HNE_1609 "Putative membrane protein" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000158 GenomeReviews:CP000158_GR InterPro:IPR008537
Pfam:PF05684 eggNOG:COG5505 HOGENOM:HOG000220761 OMA:GMISASY
RefSeq:YP_760317.1 STRING:Q0C1S6 GeneID:4287135 KEGG:hne:HNE_1609
PATRIC:32216041 BioCyc:HNEP228405:GI69-1641-MONOMER Uniprot:Q0C1S6
Length = 378
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 114/371 (30%), Positives = 189/371 (50%)
Query: 40 IISPNDHWGTWTALLVTGAFGLWSEKTKLGSMVSAALVSTLLGLAASNLGIIPYEAKAYA 99
+ISP++ +G LV A + EKT +G VS + + + A+NLG+IP A Y
Sbjct: 1 MISPDNVFGLLAVFLVLSAIAVALEKTPVGRRVSGVGLLLIGSILAANLGLIPRSAPVYG 60
Query: 100 VXXXXXXXXXXXXXXXRADLRRIVQSTGILLLAFLLGSVATTVGTLVAFLLVPMRSLGTD 159
+ADL +I + G +LLAF LG++ G L+ L+ LG
Sbjct: 61 AIWTYLVPIAIALFLLKADLLKIFREGGRVLLAFSLGTLGVAAGALLGGSLL---DLGPG 117
Query: 160 SWKIASAFMGSYIGGSINYVAISEALGVSP-SVLAAGVAADNVITAIYFMILFTLAS-KI 217
+IA+ F +Y+GGS+N+VA++EA+G + S LAA +A DN++ + M + LA+
Sbjct: 118 GPEIAAVFSATYVGGSLNFVAVAEAIGFTDNSRLAAALAIDNILGVSFIMAMNLLAAWPA 177
Query: 218 PPEASPANGTEVDK---ESNSEDKTPV-LQTA-TALAISFVICKTATYLSNLFGIQGGSL 272
A P + + + ++ + + + + LQ+ T+LAI+ I + L++ GI +L
Sbjct: 178 LHRAYPWRSSTIFEGPDDTQAPELSAISLQSILTSLAIAATIVAVSMALADRLGITSYAL 237
Query: 273 PGVTAIVVILATLLPKQFSYLAPAGDTLALVLMQVFFSVVGASGSIWNVINTAPSIFLFA 332
VT ++AT +Q S L D +A+V M +FF+++GA + V++ AP FL
Sbjct: 238 LLVTTFTALIATFGRRQLSRLQ-GEDLVAMVFMYMFFAIIGAGTDLKGVLDAAPEYFLLV 296
Query: 333 LVQVTVHLAIILGLGKLFHFDLKLLLIASNANVGGPTTACGMATTKGWGSLVVPGILAGI 392
+ +L + G + L++A A + GP A +A W +LVVPGIL G+
Sbjct: 297 AMIFAGNLLVTFIAGWFLKLNYAELIVACIACIAGPPVAAAIAIMMKWRNLVVPGILTGV 356
Query: 393 FGISMATFLGL 403
G + F G+
Sbjct: 357 LGYIIGNFTGI 367
>UNIPROTKB|Q8EAR8 [details] [associations]
symbol:SO_3828 "Uncharacterized protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001991
PRINTS:PR00173 GO:GO:0016020 GO:GO:0017153 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR008537 Pfam:PF05684
HOGENOM:HOG000287762 OMA:PALLMCY ProtClustDB:CLSK907361
RefSeq:NP_719361.1 GeneID:1171473 KEGG:son:SO_3828 PATRIC:23527342
Uniprot:Q8EAR8
Length = 415
Score = 120 (47.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 278 IVVILATL-LPKQFS---YLAPAGDT-LALVLMQVFFSVVGASGSIWNVINTAPSIFLFA 332
+VVI+ T+ L FS +L AG + +A + + + +G + V++T P FL
Sbjct: 276 LVVIVTTIGLAMSFSPMRHLEAAGASKVASAFLYILVATIGLHMDVSKVLDT-PIYFLVG 334
Query: 333 LVQVTVHLAIILGLGKLFHFDLKLLLIASNANVGGPTTACGMATTKGWGSLVVPGILAGI 392
++ + VH + + + KL L + + S ANVGG +A +A +L G+L +
Sbjct: 335 IIWMIVHASFMFLIAKLIKAPLFYMAVGSQANVGGAASAPVVAAAFH-PALAPVGVLLAV 393
Query: 393 FGISMATFL 401
FG + T++
Sbjct: 394 FGYVLGTYM 402
Score = 120 (47.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 43/182 (23%), Positives = 75/182 (41%)
Query: 67 KLGSMVSAALVSTLLGLAASNLGIIPYE-AKAYAVXXXXXXXXXXXXXXXRADLRRIVQS 125
K + A L+ L + G+I + ++ Y V DL+ I+
Sbjct: 37 KFYRFIPALLLCYFLPSLLNTFGVIDGDTSQLYQVASRYLLPACLVLLILSVDLKAILGL 96
Query: 126 TGILLLAFLLGSVATTVGTLVAFLLVPMRS---LGTDS----WKIASAFMGSYIGGSINY 178
++ FL G++ +G +A L V +G D W+ + GS+IGG N
Sbjct: 97 GPKAVIMFLTGTIGIVIGGPIALLTVSFIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQ 156
Query: 179 VAISEALGVSPSVLAAGVAADNVITAIYFMILFTLASKIPP-EASP-ANGTEVDKESNSE 236
A+ E V ++ + V D ++ I+ +L LASK +A A+ T +D N
Sbjct: 157 AAMKEIYEVGGNIFSVMVTVDVIVANIWMAVLLFLASKAKEIDAKTGADTTAIDTLKNKV 216
Query: 237 DK 238
++
Sbjct: 217 EQ 218
>TIGR_CMR|SO_3828 [details] [associations]
symbol:SO_3828 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001991 PRINTS:PR00173 GO:GO:0016020 GO:GO:0017153
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR008537
Pfam:PF05684 HOGENOM:HOG000287762 OMA:PALLMCY
ProtClustDB:CLSK907361 RefSeq:NP_719361.1 GeneID:1171473
KEGG:son:SO_3828 PATRIC:23527342 Uniprot:Q8EAR8
Length = 415
Score = 120 (47.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 278 IVVILATL-LPKQFS---YLAPAGDT-LALVLMQVFFSVVGASGSIWNVINTAPSIFLFA 332
+VVI+ T+ L FS +L AG + +A + + + +G + V++T P FL
Sbjct: 276 LVVIVTTIGLAMSFSPMRHLEAAGASKVASAFLYILVATIGLHMDVSKVLDT-PIYFLVG 334
Query: 333 LVQVTVHLAIILGLGKLFHFDLKLLLIASNANVGGPTTACGMATTKGWGSLVVPGILAGI 392
++ + VH + + + KL L + + S ANVGG +A +A +L G+L +
Sbjct: 335 IIWMIVHASFMFLIAKLIKAPLFYMAVGSQANVGGAASAPVVAAAFH-PALAPVGVLLAV 393
Query: 393 FGISMATFL 401
FG + T++
Sbjct: 394 FGYVLGTYM 402
Score = 120 (47.3 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 43/182 (23%), Positives = 75/182 (41%)
Query: 67 KLGSMVSAALVSTLLGLAASNLGIIPYE-AKAYAVXXXXXXXXXXXXXXXRADLRRIVQS 125
K + A L+ L + G+I + ++ Y V DL+ I+
Sbjct: 37 KFYRFIPALLLCYFLPSLLNTFGVIDGDTSQLYQVASRYLLPACLVLLILSVDLKAILGL 96
Query: 126 TGILLLAFLLGSVATTVGTLVAFLLVPMRS---LGTDS----WKIASAFMGSYIGGSINY 178
++ FL G++ +G +A L V +G D W+ + GS+IGG N
Sbjct: 97 GPKAVIMFLTGTIGIVIGGPIALLTVSFIEPSLIGVDGPDAVWRGMTTLAGSWIGGGANQ 156
Query: 179 VAISEALGVSPSVLAAGVAADNVITAIYFMILFTLASKIPP-EASP-ANGTEVDKESNSE 236
A+ E V ++ + V D ++ I+ +L LASK +A A+ T +D N
Sbjct: 157 AAMKEIYEVGGNIFSVMVTVDVIVANIWMAVLLFLASKAKEIDAKTGADTTAIDTLKNKV 216
Query: 237 DK 238
++
Sbjct: 217 EQ 218
>GENEDB_PFALCIPARUM|PF13_0172 [details] [associations]
symbol:PF13_0172 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844509 RefSeq:XP_001350052.1
ProteinModelPortal:Q8IE07 EnsemblProtists:PF13_0172:mRNA
GeneID:814142 KEGG:pfa:PF13_0172 EuPathDB:PlasmoDB:PF3D7_1332100
HOGENOM:HOG000283262 ProtClustDB:CLSZ2433285 InterPro:IPR008537
Pfam:PF05684 Uniprot:Q8IE07
Length = 522
Score = 112 (44.5 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 23/87 (26%), Positives = 51/87 (58%)
Query: 131 LAFLLGSVATTVGTLVAFLLVP----MRSLGTDSW---KIASAFMGSYIGGSINYVAISE 183
+AF G+++T +G +++++L+ + DS+ IA + +YIGG IN++ +S+
Sbjct: 133 IAFFFGAISTIIGVVMSYILIKHIFIKNEIDIDSYYLKNIACCLVSTYIGGFINFIEVSD 192
Query: 184 ALGVSPSVLAAGVAADNVITAIYFMIL 210
L ++ ++ + D++ T I+ M+L
Sbjct: 193 LLNLNTTLRNSVFILDDMFTNIFLMML 219
Score = 106 (42.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 242 LQTATALAISFVICKTATYLSNLFGIQGGSLPGVTAIVVILATLLPKQFSYLAPAGDTLA 301
++T L I+F+ T Y+ LF I L I+ + + + Y + T+
Sbjct: 354 IKTPFLLIITFIYIFTIDYI--LF-IMNKILNN-NHIINFVMDIYHRSLEYYS----TIL 405
Query: 302 LVLMQVFFSVVGASGSIWNVINTAPSIFLFALVQVTVHLA-------IILGLGKLFHFDL 354
+ + S+ S +I NV N A + LF + +H+ I + K H +
Sbjct: 406 KLTTIYYLSLSAISINIKNVFNVAKPLVLFITCILIIHVLCTFIFSYIYNSVSKSEHAFI 465
Query: 355 KL--LLIASNANVGGPTTACGMATTKGWGSLVVPGILAGIFGISMAT 399
+ +L+A NAN+GGPTTA M+ G L+ + G+ G +AT
Sbjct: 466 YIDEVLLAINANIGGPTTAALMSEMIGRSDLIFASLFWGVIGYLIAT 512
>UNIPROTKB|Q8IE07 [details] [associations]
symbol:PF13_0172 "Uncharacterized protein" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
EMBL:AL844509 RefSeq:XP_001350052.1 ProteinModelPortal:Q8IE07
EnsemblProtists:PF13_0172:mRNA GeneID:814142 KEGG:pfa:PF13_0172
EuPathDB:PlasmoDB:PF3D7_1332100 HOGENOM:HOG000283262
ProtClustDB:CLSZ2433285 InterPro:IPR008537 Pfam:PF05684
Uniprot:Q8IE07
Length = 522
Score = 112 (44.5 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 23/87 (26%), Positives = 51/87 (58%)
Query: 131 LAFLLGSVATTVGTLVAFLLVP----MRSLGTDSW---KIASAFMGSYIGGSINYVAISE 183
+AF G+++T +G +++++L+ + DS+ IA + +YIGG IN++ +S+
Sbjct: 133 IAFFFGAISTIIGVVMSYILIKHIFIKNEIDIDSYYLKNIACCLVSTYIGGFINFIEVSD 192
Query: 184 ALGVSPSVLAAGVAADNVITAIYFMIL 210
L ++ ++ + D++ T I+ M+L
Sbjct: 193 LLNLNTTLRNSVFILDDMFTNIFLMML 219
Score = 106 (42.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 242 LQTATALAISFVICKTATYLSNLFGIQGGSLPGVTAIVVILATLLPKQFSYLAPAGDTLA 301
++T L I+F+ T Y+ LF I L I+ + + + Y + T+
Sbjct: 354 IKTPFLLIITFIYIFTIDYI--LF-IMNKILNN-NHIINFVMDIYHRSLEYYS----TIL 405
Query: 302 LVLMQVFFSVVGASGSIWNVINTAPSIFLFALVQVTVHLA-------IILGLGKLFHFDL 354
+ + S+ S +I NV N A + LF + +H+ I + K H +
Sbjct: 406 KLTTIYYLSLSAISINIKNVFNVAKPLVLFITCILIIHVLCTFIFSYIYNSVSKSEHAFI 465
Query: 355 KL--LLIASNANVGGPTTACGMATTKGWGSLVVPGILAGIFGISMAT 399
+ +L+A NAN+GGPTTA M+ G L+ + G+ G +AT
Sbjct: 466 YIDEVLLAINANIGGPTTAALMSEMIGRSDLIFASLFWGVIGYLIAT 512
>UNIPROTKB|Q47Y98 [details] [associations]
symbol:CPS_3548 "Putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000864 InterPro:IPR001991 PRINTS:PR00173
PROSITE:PS00285 GO:GO:0009611 GO:GO:0016020 GO:GO:0004867
GO:GO:0017153 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR008537 Pfam:PF05684 eggNOG:COG5505 RefSeq:YP_270222.1
STRING:Q47Y98 GeneID:3523046 KEGG:cps:CPS_3548 PATRIC:21470027
HOGENOM:HOG000287762 OMA:PALLMCY ProtClustDB:CLSK907361
BioCyc:CPSY167879:GI48-3576-MONOMER Uniprot:Q47Y98
Length = 420
Score = 109 (43.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 53/216 (24%), Positives = 91/216 (42%)
Query: 67 KLGSMVSAALVSTLLGLAASNLGIIPYE-AKAYAVXXXXXXXXXXXXXXXRADLRRIVQS 125
K V A L+ LL + GI+ E ++ V D++ I
Sbjct: 42 KFYKYVPALLMCYLLPSFLNTFGIVSAEVSQVDEVAKYFLLPACLVLLTLSIDVKAIAGL 101
Query: 126 TGILLLAFLLGSVATTVGTLVAFLLV----P--MRSLGTDS-WKIASAFMGSYIGGSINY 178
++ FL G+V +G +A L+V P + G ++ W+ +A GS+IGG N
Sbjct: 102 GSKAIIMFLTGTVGVVIGGPIALLIVSAIWPELIGVTGPEAVWRGMAALAGSWIGGGANM 161
Query: 179 VAISEALGVSPSVLAAGVAADNVITAIYFMILFTLAS--KIPPEASPANGTEVDK---ES 233
+A+ E + V D V+ I+ +L +A+ K S A+ + +DK +
Sbjct: 162 LAMKEIFEADGKIFTIMVTVDIVVANIWMAVLLYIAANHKAIDAKSGADTSGIDKLIADV 221
Query: 234 NSEDK----TPVLQTAT-ALAISFVICKTATYLSNL 264
+ DK TP L+ +AI+F A + ++L
Sbjct: 222 EAFDKEHKRTPELKDFIFIIAIAFGAAGFAHFAADL 257
Score = 101 (40.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 21/97 (21%), Positives = 48/97 (49%)
Query: 305 MQVFFSVVGASGSIWNVINTAPSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIASNAN 364
+ + + +G + + AP + L+ + +H+A++ +G+ + L + S AN
Sbjct: 313 LYILVATIGLHMDVTQIAE-APKYVVIGLIWMAIHVALLFAVGRFIKAPIFYLAVGSKAN 371
Query: 365 VGGPTTACGMATTKGWGSLVVPGILAGIFGISMATFL 401
+GG +A +A+ SL G+L + G ++ T++
Sbjct: 372 IGGAASAPVIASAFH-PSLAPVGVLLAVLGYALGTYM 407
>TIGR_CMR|CPS_3548 [details] [associations]
symbol:CPS_3548 "putative membrane protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=ISS] InterPro:IPR000864
InterPro:IPR001991 PRINTS:PR00173 PROSITE:PS00285 GO:GO:0009611
GO:GO:0016020 GO:GO:0004867 GO:GO:0017153 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR008537 Pfam:PF05684
eggNOG:COG5505 RefSeq:YP_270222.1 STRING:Q47Y98 GeneID:3523046
KEGG:cps:CPS_3548 PATRIC:21470027 HOGENOM:HOG000287762 OMA:PALLMCY
ProtClustDB:CLSK907361 BioCyc:CPSY167879:GI48-3576-MONOMER
Uniprot:Q47Y98
Length = 420
Score = 109 (43.4 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 53/216 (24%), Positives = 91/216 (42%)
Query: 67 KLGSMVSAALVSTLLGLAASNLGIIPYE-AKAYAVXXXXXXXXXXXXXXXRADLRRIVQS 125
K V A L+ LL + GI+ E ++ V D++ I
Sbjct: 42 KFYKYVPALLMCYLLPSFLNTFGIVSAEVSQVDEVAKYFLLPACLVLLTLSIDVKAIAGL 101
Query: 126 TGILLLAFLLGSVATTVGTLVAFLLV----P--MRSLGTDS-WKIASAFMGSYIGGSINY 178
++ FL G+V +G +A L+V P + G ++ W+ +A GS+IGG N
Sbjct: 102 GSKAIIMFLTGTVGVVIGGPIALLIVSAIWPELIGVTGPEAVWRGMAALAGSWIGGGANM 161
Query: 179 VAISEALGVSPSVLAAGVAADNVITAIYFMILFTLAS--KIPPEASPANGTEVDK---ES 233
+A+ E + V D V+ I+ +L +A+ K S A+ + +DK +
Sbjct: 162 LAMKEIFEADGKIFTIMVTVDIVVANIWMAVLLYIAANHKAIDAKSGADTSGIDKLIADV 221
Query: 234 NSEDK----TPVLQTAT-ALAISFVICKTATYLSNL 264
+ DK TP L+ +AI+F A + ++L
Sbjct: 222 EAFDKEHKRTPELKDFIFIIAIAFGAAGFAHFAADL 257
Score = 101 (40.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 21/97 (21%), Positives = 48/97 (49%)
Query: 305 MQVFFSVVGASGSIWNVINTAPSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIASNAN 364
+ + + +G + + AP + L+ + +H+A++ +G+ + L + S AN
Sbjct: 313 LYILVATIGLHMDVTQIAE-APKYVVIGLIWMAIHVALLFAVGRFIKAPIFYLAVGSKAN 371
Query: 365 VGGPTTACGMATTKGWGSLVVPGILAGIFGISMATFL 401
+GG +A +A+ SL G+L + G ++ T++
Sbjct: 372 IGGAASAPVIASAFH-PSLAPVGVLLAVLGYALGTYM 407
>TIGR_CMR|SO_1120 [details] [associations]
symbol:SO_1120 "xanthine/uracil permease family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0015211 "purine
nucleoside transmembrane transporter activity" evidence=ISS]
[GO:0015860 "purine nucleoside transmembrane transport"
evidence=ISS] InterPro:IPR006043 Pfam:PF00860 GO:GO:0016020
GO:GO:0055085 GO:GO:0005215 EMBL:AE014299 GenomeReviews:AE014299_GR
KO:K06901 PANTHER:PTHR11119 InterPro:IPR026033 PIRSF:PIRSF005353
HOGENOM:HOG000244363 RefSeq:NP_716745.1 GeneID:1168952
KEGG:son:SO_1120 PATRIC:23521880 OMA:FESIAPI ProtClustDB:CLSK906100
Uniprot:Q8EHU3
Length = 429
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 81/357 (22%), Positives = 147/357 (41%)
Query: 31 MVRSQLSN-PI-ISPNDHWGTWTALLVTGAFGLWSEKTKLGSMVSAALVSTLLGLAASNL 88
+V ++N PI ++P + V G G +S +T LG++ + + +L L
Sbjct: 63 IVMGLMANYPIALAPGMGLNAFFTYTVVGEMG-YSWETALGAVFLSGICFLILSLVRIRE 121
Query: 89 GIIPYEAKAYAVXXXXXXXXXXXXXXXRADLRRIVQSTGILLLAFLLGSVATTVGTLVAF 148
I+ + + ++ +V S L+ + + + L F
Sbjct: 122 WIVNSIPMSLRIGIAAGIGLFLALIGLKS-AGIVVASPATLVTMGDITAFPAVMAVLGFF 180
Query: 149 LLVPMRSLGTDSWKIASAFMGSYIG---GSINYVAI-SEALGVSPSVLAAG------VAA 198
L++ M G S I S + + +G G ++Y I S ++P+ + V
Sbjct: 181 LIIAMVQRGMKSAVILSILIITGLGLLFGDVHYNGIVSMPPSIAPTFMQMDLSQVFEVTM 240
Query: 199 DNVITAIYFMILFTLASKIPPEASPANGTEVDKESNSEDKTPVLQTATALA-ISFVICKT 257
+V+ A F+ LF + + A G +D E+N + TA +LA I+ T
Sbjct: 241 LSVVFAFLFVDLFDTSGTLVAVAQ--RGGFLD-ENNRLPRLNRALTADSLATIAGAALGT 297
Query: 258 AT---YLSNLFGIQGGSLPGVTAIVVILATLLPKQFSYLA---PAGDTLALVLMQVFFSV 311
+T Y+ + G+ G G+TA+VV L +L S LA PA T + +
Sbjct: 298 STTTSYIESTAGVSAGGRTGLTAVVVGLLFILALFVSPLAGMIPAYATAGTLFYVAILMM 357
Query: 312 VGASGSIW-NVINTAPSIFLFALVQVTVHLAIILGLGKLFHFDLKLLLIA-SNANVG 366
G W ++ AP + + L+ +T +A + LG + + +KLL S+ N+G
Sbjct: 358 SGLVHVEWEDLTEAAPVVIVCILMPLTFSIATGIALGIISYAAIKLLTGRFSDLNIG 414
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.136 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 413 398 0.00097 117 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 10
No. of states in DFA: 605 (64 KB)
Total size of DFA: 205 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.56u 0.10s 33.66t Elapsed: 00:00:02
Total cpu time: 33.56u 0.10s 33.66t Elapsed: 00:00:02
Start: Fri May 10 17:36:58 2013 End: Fri May 10 17:37:00 2013