BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 048245
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255553119|ref|XP_002517602.1| RNA binding protein, putative [Ricinus communis]
gi|223543234|gb|EEF44766.1| RNA binding protein, putative [Ricinus communis]
Length = 471
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/304 (42%), Positives = 189/304 (62%), Gaps = 12/304 (3%)
Query: 1 EEGSQYLQEKLSSGDS-----RILDKLFWVVSGFTF--ELMSGQYGRFVFGKFIESCNES 53
++GS+YLQ+ L++ DS +ILDK+ V G LM Q+G V K I+SCN+
Sbjct: 151 QQGSEYLQDLLATSDSYLTTSKILDKVTASVVGIPVINYLMVDQHGYHVCSKLIDSCNDI 210
Query: 54 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT 113
QL LI+ +IT + F+ GS +KKLIK V +S + Y +S K ++ L +
Sbjct: 211 QLTLILERITKNTEQFVRICCAINGSKMIKKLIKKVKRSCLISYLTVSLYKGFYQ-LAIN 269
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ GS V++ C++ +N +Y+AA+ HCL LA GC++ N FID ++GSRR+ +L
Sbjct: 270 QIGSYVVVFCMDCLDIQQNALLYEAAISHCLILATDAIGCVSANKFIDRIQGSRRQTLLE 329
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
LIS NA LS+ SGN+VVQ VL LE+P + I L+GHYV LS K GS VV+K L
Sbjct: 330 LISDNAVFLSQDPSGNHVVQKVLGLENPIINAKIGAQLKGHYVRLSFQKWGSHVVEKCLV 389
Query: 234 YQNAVHYIVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
Q A+ Y V++LL S Q+LQ+A D++GNYVIQ AL T +++ +++H+ L+ L+ +L
Sbjct: 390 SQ-AMVYAVQDLLTCGSSQLLQIARDQFGNYVIQKALKVTKKKN-IALHRILLNSLEPNL 447
Query: 292 AALR 295
ALR
Sbjct: 448 NALR 451
>gi|255544718|ref|XP_002513420.1| conserved hypothetical protein [Ricinus communis]
gi|223547328|gb|EEF48823.1| conserved hypothetical protein [Ricinus communis]
Length = 483
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/303 (41%), Positives = 186/303 (61%), Gaps = 11/303 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFE------LMSGQYGRFVFGKFIESCNESQ 54
++GS++LQ+ L+ +S KL V+ E LM QYG V K I+SCN+ Q
Sbjct: 160 QQGSKHLQDLLAYSNSDFASKLLETVTASVVEIPVINYLMVDQYGCHVCSKLIDSCNDKQ 219
Query: 55 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTK 114
LALI+ +IT D+ F+ + GS +KKLIK V +S + Y +S L + F L + +
Sbjct: 220 LALILERITRNDEQFVQICCNINGSKMIKKLIKKVKRSCLICYMTVS-LYKGFCQLAINQ 278
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
GS V++ C++ ++ +Y+AA+ HCL LA GC+++NNFID ++GS R+ +L L
Sbjct: 279 IGSYVVVFCMDCLDVKQSALLYEAAISHCLILATDATGCVSINNFIDRIQGSHRQTLLEL 338
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
IS NA LS+ SGN+VVQ VL LE+P + I L+GHY LS K GS VV+K L
Sbjct: 339 ISDNAVFLSQDPSGNHVVQKVLELENPIINAKIGAQLKGHYARLSFQKWGSHVVEKCLVS 398
Query: 235 QNAVHYIVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
Q V Y+V++LL S Q+ Q+A D++GNYVIQ AL T +++ +++H L+ L+ +L
Sbjct: 399 QPIV-YVVQDLLTCGSSQLSQIARDQFGNYVIQKALKVTKKKN-ITLHLILLNSLKPNLN 456
Query: 293 ALR 295
AL+
Sbjct: 457 ALQ 459
>gi|147798084|emb|CAN67257.1| hypothetical protein VITISV_039435 [Vitis vinifera]
Length = 507
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 162/264 (61%), Gaps = 3/264 (1%)
Query: 39 GRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH 98
G VF + E+C+ +QL+ I+ K+ + S D GS S+++LI+V+ +SP L+
Sbjct: 236 GCNVFIRLTEACDANQLSQILSKLILPPSTIIRVSHDPIGSKSIQRLIQVLRRSP-LVVP 294
Query: 99 VMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNN 158
V++AL F LM + G+ VI +CL + +N+ +Y+AA+ C+ LA H +GCI LN+
Sbjct: 295 VVTALAAGFYELMKDQQGAMVISRCLALLSSEQNEELYRAAILPCVALATHAKGCIALNS 354
Query: 159 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDL 218
FI+N+ G R +LH I+ N LS+ GN+VVQH+L L P IC L+G+YV L
Sbjct: 355 FINNVIGPYRDLLLHKITDNTVFLSQDPRGNFVVQHILELHHPVFTSKICHLLQGYYVRL 414
Query: 219 SLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLS 278
S+ K GS +V+K LK + + + V+EL S ++ Q+A D++GNYVIQTAL T + +
Sbjct: 415 SVQKSGSHIVEKCLK-SHWMSFAVKELTTSGRLPQLAHDQFGNYVIQTALRVT-KDANIQ 472
Query: 279 VHQRLVTKLQQHLAALRVMKYGSN 302
+++ L+ L+ +L +L +G N
Sbjct: 473 LYRSLLEALEPYLPSLASHLHGKN 496
>gi|224117628|ref|XP_002317626.1| predicted protein [Populus trichocarpa]
gi|222860691|gb|EEE98238.1| predicted protein [Populus trichocarpa]
Length = 502
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 161/272 (59%), Gaps = 3/272 (1%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
ELM Q+G VFG+ I++ N QL LI +IT F+ ++D GS+S++K+I+++
Sbjct: 221 LELMLDQHGWHVFGELIDALNYQQLKLITYEITKNLDNFVSLTLDTHGSNSIRKVIRLLR 280
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+SP L+ VM+ L+ F +M + GS + +C N +Y+AA+E CL LA
Sbjct: 281 RSP-LVTLVMNNLRAAFFTIMTNRIGSYAVSECFNQLSAEDNRLLYEAAIECCLDLAIDH 339
Query: 151 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
+G + L I+ ++G +R ++L ++S A LS+ GNYVVQ V++L +P IC
Sbjct: 340 EGSLALIRVINTIQGLQRYRLLDILSTYVAFLSQDPKGNYVVQKVISLNNPLFTQKICHH 399
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVE 270
LRG+Y +SL K GS + +K L + I + L N++ +LQVA D++GNYVIQ AL
Sbjct: 400 LRGYYGTISLQKGGSHIAEKCLDTEWKSWVIEDFLSNTNTLLQVAKDEFGNYVIQKALKV 459
Query: 271 TMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
T + ++Q+L+ +LQ HL+ L+ YG N
Sbjct: 460 TKKSGS-PLYQKLLLRLQPHLSILQ-SGYGRN 489
>gi|255564824|ref|XP_002523406.1| RNA binding protein, putative [Ricinus communis]
gi|223537356|gb|EEF38985.1| RNA binding protein, putative [Ricinus communis]
Length = 771
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 7/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K S G + ++K+F V ELM+ +G ++ K +E CNE Q I+
Sbjct: 434 QHGCRFLQRKFSEGTPQDIEKIFLEVIDHIAELMTDPFGNYLVQKLLEVCNEDQRMQILC 493
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S D G+ +V+K+I+ + ++P V+S+LK L+ G+ V
Sbjct: 494 AITRKAGELVRISCDMHGTRAVQKVIETL-KTPQQFSMVVSSLKPGIVTLIKNMNGNHVA 552
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ ++F+++AA +C+ LA GC L + + +G +R+ ++ I+ NA
Sbjct: 553 QRCLQYLTPEHSEFLFEAATTNCVELATDRHGCCVLQKCLSHSEGEQRRCLISEITSNAL 612
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
LS+ GNYVVQ V L P+ I L G+Y DLS+ K S V++K LKY + H
Sbjct: 613 ILSQDPFGNYVVQFVFELRLPWATANILDQLEGNYGDLSMQKYSSNVIEKCLKYASEEHR 672
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+I+ +L+++ + QV D YGNYVIQ AL Q + ++H LV ++ H+ LR
Sbjct: 673 AHIIRQLISNTHLDQVMQDPYGNYVIQAAL----HQSKGALHAALVEAIRPHVPVLRTSP 728
Query: 299 YG 300
YG
Sbjct: 729 YG 730
>gi|297793151|ref|XP_002864460.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
gi|297310295|gb|EFH40719.1| APUM12 [Arabidopsis lyrata subsp. lyrata]
Length = 598
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/302 (32%), Positives = 164/302 (54%), Gaps = 7/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + D ++ +F + + ELM +G ++ K +E CNE Q I+
Sbjct: 291 QHGCRFLQRIFAEKDGNDIEMIFDEIIDYISELMIDPFGNYLVQKLLEVCNEDQRMQIVH 350
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L + S D G+ +V+K+++ + + ++SALK L+ G+ V+
Sbjct: 351 SITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI-IISALKHGIVNLIKNVNGNHVV 409
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ H F+++AA+ HC+ LA GC L + +G +++ ++ I+ NA
Sbjct: 410 QRCLQYLLPHCGKFLFEAAITHCVDLATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNAL 469
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
LS+ GNYV+Q+V L+ + I L G+Y +LS+ KC S VV+K LK + H
Sbjct: 470 LLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHR 529
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL+N ++ QV D YGNYVIQ AL RQ + +VH LV ++ H+++LR
Sbjct: 530 ARIIRELINYGRLDQVMLDPYGNYVIQAAL----RQSKGNVHALLVDAIKLHISSLRTNP 585
Query: 299 YG 300
YG
Sbjct: 586 YG 587
>gi|224056741|ref|XP_002299000.1| predicted protein [Populus trichocarpa]
gi|222846258|gb|EEE83805.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 158/273 (57%), Gaps = 5/273 (1%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
FELM Q+G VF + I+S N QL LI IT +F+ + GS+ +KK+I+++
Sbjct: 215 FELMLNQHGWQVFSELIDSLNHQQLKLITYVITKDLSIFIALTFHTHGSNLIKKVIRILR 274
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+S L+ V + L F +M + GS V+ +CL N +Y+AA+ CL LA
Sbjct: 275 RSH-LISFVTNNLCAAFLLIMTNRIGSYVVSECLNHLRAEDNKALYEAAITWCLDLAIDH 333
Query: 151 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
+G I L I+ ++G +R ++L+++S NA LS+ GNYV+Q V++L +P +C
Sbjct: 334 EGSIALIRVINTIQGLQRYRLLNILSRNAVFLSQDPEGNYVIQKVISLNNPLFTQNVCHL 393
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNYVIQTALV 269
L GHY +SL K GS +V+K L + +I+E L N++ +L VA D +GNYVIQ AL
Sbjct: 394 LIGHYETISLQKGGSHIVEKCLDTE-WKGWIIENFLSNTNTLLHVAKDAFGNYVIQKALK 452
Query: 270 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
T + ++ +L+++L+ HL+ L+ YG N
Sbjct: 453 VTKKSGS-PLYHKLLSRLKPHLSILQ-SGYGRN 483
>gi|302775508|ref|XP_002971171.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
gi|300161153|gb|EFJ27769.1| hypothetical protein SELMODRAFT_94948 [Selaginella moellendorffii]
Length = 321
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 165/300 (55%), Gaps = 9/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ + G + L K+F + +LM+ +G ++ K +E C E Q L IL++
Sbjct: 17 GCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQ-RLEILRV 75
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ S++ G+ +V+KLI+ + +SP + + S+L++ L+ G+ V+ +
Sbjct: 76 VCSGDELISISLNMHGTRAVQKLIETL-KSPEQVSMITSSLEQGIVILIKDLNGNHVVQR 134
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ N +N FI+ AA +HC+ + H GC L +D KG ++++++ I+ NA L
Sbjct: 135 CLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGEIAANALVL 194
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHY 240
S+ + GNYVVQ++L+ E P++ + L GH+ L++ K S VV+K LK +
Sbjct: 195 SQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLKQGADDKRAR 253
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
I+ EL S + Q+ D + NYVIQ AL T + ++H LV ++ HL ALR YG
Sbjct: 254 IIHELTKSAFLGQLLQDPFANYVIQCALTVT----KGALHASLVEAIRPHLPALRSSPYG 309
>gi|302756987|ref|XP_002961917.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
gi|300170576|gb|EFJ37177.1| hypothetical protein SELMODRAFT_75995 [Selaginella moellendorffii]
Length = 322
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 165/300 (55%), Gaps = 9/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ + G + L K+F + +LM+ +G ++ K +E C E Q L IL++
Sbjct: 18 GCRFLQRRFDEGVAEDLQKIFEEIIDHIVDLMTDPFGNYLVQKLLEVCTEDQ-RLEILRV 76
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ S++ G+ +V+KLI+ + +SP + + S+L++ L+ G+ V+ +
Sbjct: 77 VCSGDELISISLNMHGTRAVQKLIETL-KSPEQVSMITSSLEQGIVILIKDLNGNHVVQR 135
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ N +N FI+ AA +HC+ + H GC L +D KG ++++++ I+ NA L
Sbjct: 136 CLQRLGNEENQFIFDAAAQHCVEVGTHRHGCCVLQRCVDFSKGVQKERLVGEIAANALVL 195
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHY 240
S+ + GNYVVQ++L+ E P++ + L GH+ L++ K S VV+K LK +
Sbjct: 196 SQDQYGNYVVQYILD-EAPWIAPEVMAQLEGHHAHLAMQKFSSNVVEKCLKQGADDKRAR 254
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
I+ EL S + Q+ D + NYVIQ AL T + ++H LV ++ HL ALR YG
Sbjct: 255 IIHELTKSAFLGQLLQDPFANYVIQCALTVT----KGALHASLVEAIRPHLPALRSSPYG 310
>gi|168015525|ref|XP_001760301.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688681|gb|EDQ75057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 347
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 166/302 (54%), Gaps = 8/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + K+F+ + G ELM +G ++ K +E C+ESQ + IL
Sbjct: 41 QHGCRFLQKKFDEGGPEDVQKIFYEIIGHITELMKDPFGNYLVQKLLEVCDESQ-RMEIL 99
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ D + S++ G+ +V+KLI+ + +SP + V++AL L+ G+ V+
Sbjct: 100 RVVTTDGELVKISLNMHGTRAVQKLIETL-KSPDQVTMVITALTEGVVELIKDLNGNHVV 158
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + + FI+ AA HC+ +A H GC + +D ++++++ +I+ NA
Sbjct: 159 QRCLQKLSHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRLVAVIAANAL 218
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
+LS+ GNYVVQ++L+L+ + + L G Y L++ K S VV+K LK H
Sbjct: 219 TLSQDPYGNYVVQYILDLKQGWATSEVMLRLEGSYAFLAMQKFSSNVVEKCLKLGVEEHR 278
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+V EL S ++ Q+ D+Y NYVIQ+AL + +H LV ++ +L ALR
Sbjct: 279 GRLVRELTASSRLGQLLQDQYANYVIQSALSVC----KGPLHAGLVDAIRPYLPALRNSP 334
Query: 299 YG 300
YG
Sbjct: 335 YG 336
>gi|224052863|ref|XP_002297618.1| predicted protein [Populus trichocarpa]
gi|222844876|gb|EEE82423.1| predicted protein [Populus trichocarpa]
Length = 620
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 164/312 (52%), Gaps = 20/312 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ S G + ++K+F + ELM+ +G ++ K +E CNE Q I+
Sbjct: 306 QHGCRFLQRTFSEGTPQDVEKIFLEIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILR 365
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S D G+ +V+K+I+ + ++P V+SALK L+ G+ V
Sbjct: 366 TITRKAGELVRISCDMHGTRAVQKVIETL-KTPEQFSMVVSALKPCIVTLIKNMNGNHVA 424
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
+CL+ P Y ++F+++A +C+ LA GC L + KG +R+ ++ I+
Sbjct: 425 QRCLQYLMPEY---SEFLFEATTANCVELATDRHGCCVLQKCLSQSKGEQRRCLVSEITS 481
Query: 178 NAASLSRHRSG-------NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
NA LS+ G NYVVQ V L P+ I L G+Y DLS+ K S VV+K
Sbjct: 482 NALILSQDPFGYCIFLFSNYVVQFVFELRLPWAATDILDQLEGNYGDLSVQKYSSNVVEK 541
Query: 231 FLKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
LKY V I+ EL+N+ ++ QV D +GNYVIQ AL +Q + ++H LV ++
Sbjct: 542 CLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYVIQAAL----QQSKGALHAALVEAIR 597
Query: 289 QHLAALRVMKYG 300
H+ L+ YG
Sbjct: 598 PHVPTLQTSPYG 609
>gi|22327888|ref|NP_200462.2| pumilio 12 [Arabidopsis thaliana]
gi|313471423|sp|Q9LVC3.2|PUM12_ARATH RecName: Full=Pumilio homolog 12; Short=APUM-12; Short=AtPUM12
gi|332009392|gb|AED96775.1| pumilio 12 [Arabidopsis thaliana]
Length = 596
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 164/302 (54%), Gaps = 7/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ S D ++ +F + + ELM +G ++ K +E CNE Q I+
Sbjct: 289 QHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVH 348
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L + S D G+ +V+K+++ + + ++SALK L+ G+ V+
Sbjct: 349 SITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI-IISALKHGIVHLIKNVNGNHVV 407
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + F+++AA+ HC+ LA GC L + +G +++ ++ I+ NA
Sbjct: 408 QRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNAL 467
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
LS+ GNYV+Q+V L+ + I L G+Y +LS+ KC S VV+K LK + H
Sbjct: 468 LLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCLKLADDKHR 527
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL+N ++ QV D YGNYVIQ AL +Q + +VH LV ++ ++++LR
Sbjct: 528 ARIIRELINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALLVDAIKLNISSLRTNP 583
Query: 299 YG 300
YG
Sbjct: 584 YG 585
>gi|297739756|emb|CBI29938.3| unnamed protein product [Vitis vinifera]
Length = 714
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K++ G++ ++K+F + G ELM+ +G ++ K +E C+E Q I+
Sbjct: 407 QSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVF 466
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L S++ G+ SV+K+I+ + +SP V+++LK L+ G V
Sbjct: 467 AITAKAGDLLTVSINMHGTRSVQKVIETI-KSPEQFLMVVASLKPGIVNLIKDLNGYHVA 525
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
CL+ P Y +F+++A HC+ LA GC L + + G R ++L I
Sbjct: 526 ECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIA 582
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K LKY
Sbjct: 583 NALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGE 642
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ I++E ++ Q+ Q+ D Y NYVIQTAL + ++H L+ ++ H+ ALR
Sbjct: 643 ERFARIIQEFMDHPQLDQMMLDPYANYVIQTAL----NHSKGALHAALLEAIRPHIPALR 698
Query: 296 VMKYG 300
YG
Sbjct: 699 TNPYG 703
>gi|147861285|emb|CAN81897.1| hypothetical protein VITISV_009053 [Vitis vinifera]
Length = 815
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K++ G++ ++K+F + G ELM+ +G ++ K +E C+E Q I+
Sbjct: 508 QSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVF 567
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L S++ G+ SV+K+I+ + +SP V+++LK L+ G V
Sbjct: 568 AITAKAGDLLTVSINMHGTRSVQKVIETI-KSPEQFLMVVASLKPGIVNLIKDLNGYHVA 626
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
CL+ P Y +F+++A HC+ LA GC L + + G R ++L I
Sbjct: 627 ECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIA 683
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K LKY
Sbjct: 684 NALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGE 743
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ I++E ++ Q+ Q+ D Y NYVIQTAL + ++H L+ ++ H+ ALR
Sbjct: 744 ERFARIIQEFMDHPQLDQMMLDPYANYVIQTAL----NHSKGALHAALLEAIRPHIPALR 799
Query: 296 VMKYG 300
YG
Sbjct: 800 TNPYG 804
>gi|225441625|ref|XP_002276886.1| PREDICTED: uncharacterized protein LOC100250413 [Vitis vinifera]
Length = 815
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/305 (32%), Positives = 162/305 (53%), Gaps = 13/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K++ G++ ++K+F + G ELM+ +G ++ K +E C+E Q I+
Sbjct: 508 QSGCRFLQRKMTEGNAEDIEKIFLEIVGHVVELMTHPFGNYLVQKLLEVCSEDQRTQIVF 567
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L S++ G+ SV+K+I+ + +SP V+++LK L+ G V
Sbjct: 568 AITAKAGDLLTVSINMHGTRSVQKVIETI-KSPEQFLMVVASLKPGIVNLIKDLNGYHVA 626
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
CL+ P Y +F+++A HC+ LA GC L + + G R ++L I
Sbjct: 627 ECCLQHLMPGYI---EFLFEAVSAHCVELATDCHGCRVLQKCLGHSDGEHRLRLLSAIIA 683
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA LS+ GNYVVQ+V LE + + L G+Y LS+ K S VV+K LKY
Sbjct: 684 NALILSQDPFGNYVVQYVFELEGSWARTEVLNQLEGYYRYLSMQKYSSNVVEKCLKYAGE 743
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ I++E ++ Q+ Q+ D Y NYVIQTAL + ++H L+ ++ H+ ALR
Sbjct: 744 ERFARIIQEFMDHPQLDQMMLDPYANYVIQTAL----NHSKGALHAALLEAIRPHIPALR 799
Query: 296 VMKYG 300
YG
Sbjct: 800 TNPYG 804
>gi|168003728|ref|XP_001754564.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694185|gb|EDQ80534.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 361
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 165/302 (54%), Gaps = 8/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + K+F + G ELM +G ++ K +E C+ESQ + IL
Sbjct: 55 QHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLVQKLLEVCDESQ-RMEIL 113
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ D + S++ G+ +V+KLI+ + +SP + V++AL L+ G+ V+
Sbjct: 114 RVVTMDGELVKISLNMHGTRAVQKLIETL-KSPEQVTMVITALTEGVVELIKDLNGNHVV 172
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + + FI+ AA HC+ +A H GC + +D ++++++ +I+ NA
Sbjct: 173 QRCLQKLCHEDSQFIFDAAAAHCVEIATHRHGCCVMQRCVDFASAPQKQRLVAVIAANAL 232
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+LS+ GNYVVQ++L+L+ + + L G Y L++ K S VV+K LK +
Sbjct: 233 ALSQDPYGNYVVQYILDLKQGWATSEVMVRLEGSYAFLAMQKFSSNVVEKCLKLGMEENR 292
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+V EL S ++ Q+ D+Y NYVIQ+AL + +H LV ++ +L ALR
Sbjct: 293 GRLVRELTASSRLGQLLQDQYANYVIQSALSVC----KGPLHAGLVDAIRPYLPALRNSP 348
Query: 299 YG 300
YG
Sbjct: 349 YG 350
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 8/142 (5%)
Query: 140 LEHCLYLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL 198
+E +YL +Q GC L D ++I H I + L + GNY+VQ +L +
Sbjct: 44 VEGRIYLIAKDQHGCRFLQKKFDEGGHEDVQKIFHEIIGHITELMKDPFGNYLVQKLLEV 103
Query: 199 EDPFLIDAI--CFALRGHYVDLSLTKCGSFVVQKF---LKYQNAVHYIVEELLNSDQILQ 253
D I + G V +SL G+ VQK LK V ++ L ++ +++
Sbjct: 104 CDESQRMEILRVVTMDGELVKISLNMHGTRAVQKLIETLKSPEQVTMVITAL--TEGVVE 161
Query: 254 VASDKYGNYVIQTALVETMRQD 275
+ D GN+V+Q L + +D
Sbjct: 162 LIKDLNGNHVVQRCLQKLCHED 183
>gi|218186872|gb|EEC69299.1| hypothetical protein OsI_38363 [Oryza sativa Indica Group]
Length = 770
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 160/303 (52%), Gaps = 8/303 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G S + K+F + EL+ +G ++ K +E CN Q I+
Sbjct: 459 QNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHDQKMHIVY 518
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT + + S D G+ V+K+I+ + SP + V+ AL LMM G V
Sbjct: 519 EITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMDANGCHVA 577
Query: 121 LKCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
L+CL+ S+ HK F+ A+E+ LA QGC + I + ++ Q+L+ I+ A
Sbjct: 578 LRCLQKFSHEHKA-FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYNITSRA 636
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
LS H+ GNYVVQ++L+L + D I L GH+ LS+ K S VV+K LK +
Sbjct: 637 LELSEHQYGNYVVQYILDLHISWATDEILDKLEGHFGSLSMQKSSSNVVEKCLKEASWPK 696
Query: 240 Y--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
I+ EL+N ++L + D YGNYVIQTAL E + +V L+ ++ H+AALR
Sbjct: 697 RVKIIHELINDPKLLHILIDPYGNYVIQTALKEC---EDAAVRAVLIGAIRPHVAALRNN 753
Query: 298 KYG 300
+G
Sbjct: 754 MFG 756
>gi|8809626|dbj|BAA97177.1| unnamed protein product [Arabidopsis thaliana]
Length = 604
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 164/310 (52%), Gaps = 15/310 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ S D ++ +F + + ELM +G ++ K +E CNE Q I+
Sbjct: 289 QHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQRMQIVH 348
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + L + S D G+ +V+K+++ + + ++SALK L+ G+ V+
Sbjct: 349 SITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI-IISALKHGIVHLIKNVNGNHVV 407
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + F+++AA+ HC+ LA GC L + +G +++ ++ I+ NA
Sbjct: 408 QRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQKQHLVSEIASNAL 467
Query: 181 SLSRHRSG--------NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
LS+ G NYV+Q+V L+ + I L G+Y +LS+ KC S VV+K L
Sbjct: 468 LLSQDPFGIDANFFCRNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSNVVEKCL 527
Query: 233 KYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
K + H I+ EL+N ++ QV D YGNYVIQ AL +Q + +VH LV ++ +
Sbjct: 528 KLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAAL----KQSKGNVHALLVDAIKLN 583
Query: 291 LAALRVMKYG 300
+++LR YG
Sbjct: 584 ISSLRTNPYG 593
>gi|297746500|emb|CBI16556.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 9/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K + G + K+F + ELM+ +G ++ K +E C E Q I+
Sbjct: 417 QNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILH 476
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S + G+ +V+K+I+ + S ++S+LK L+ G+ V
Sbjct: 477 AITRRAGDLVRISCNMHGTRAVQKVIETLRTSE-QFSMIVSSLKPGIVTLIKDMNGNHVA 535
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ +F+++AA+ +C+ LA GC L + + +R +I++ I+ NA
Sbjct: 536 QCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNAL 595
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+K L++ H
Sbjct: 596 ILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHR 653
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I++EL+N+ +I Q+ D YGNYVIQ AL + ++H L+ ++ H+ LR
Sbjct: 654 HCIIQELINNPRIDQIMQDPYGNYVIQAAL----NNSKGAIHAALIEVIRSHVHVLRTSP 709
Query: 299 YG 300
YG
Sbjct: 710 YG 711
>gi|302787963|ref|XP_002975751.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
gi|300156752|gb|EFJ23380.1| hypothetical protein SELMODRAFT_53499 [Selaginella moellendorffii]
Length = 316
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 164/302 (54%), Gaps = 8/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K S G +DK+F V +LM+ +G ++ K +E N++Q I+
Sbjct: 15 QHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQRREILR 74
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T +L + S++ G+ +V+KLI+ + +SP + V S+L + L+ G+ V+
Sbjct: 75 GVTRNGELVNI-SLNMHGTRAVQKLIETL-KSPEQVSMVTSSLMQGVVTLIKDSNGNHVV 132
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ N FI AA HC+ + H GC L ID G++ ++ I+ NA
Sbjct: 133 QKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEIAANAL 192
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
LS+ + GNYVVQ++L+LE ++ + + L G++ L++ K S VV+K LK +++
Sbjct: 193 ILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQSSEDSR 252
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ E++ S + Q+ D + NYVIQ AL + S+H LV ++ H+ LR
Sbjct: 253 ALIIREIITSSLLSQLLQDPFANYVIQCALSVA----KGSLHTALVDAIRPHVPVLRSSP 308
Query: 299 YG 300
+G
Sbjct: 309 FG 310
>gi|225435792|ref|XP_002283747.1| PREDICTED: pumilio homolog 12-like [Vitis vinifera]
Length = 711
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 159/302 (52%), Gaps = 9/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K + G + K+F + ELM+ +G ++ K +E C E Q I+
Sbjct: 406 QNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILH 465
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S + G+ +V+K+I+ + S ++S+LK L+ G+ V
Sbjct: 466 AITRRAGDLVRISCNMHGTRAVQKVIETLRTSEQFSM-IVSSLKPGIVTLIKDMNGNHVA 524
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ +F+++AA+ +C+ LA GC L + + +R +I++ I+ NA
Sbjct: 525 QCCLQNLMPEYREFLFEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNAL 584
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+K L++ H
Sbjct: 585 ILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHR 642
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I++EL+N+ +I Q+ D YGNYVIQ AL + ++H L+ ++ H+ LR
Sbjct: 643 HCIIQELINNPRIDQIMQDPYGNYVIQAAL----NNSKGAIHAALIEVIRSHVHVLRTSP 698
Query: 299 YG 300
YG
Sbjct: 699 YG 700
>gi|115488610|ref|NP_001066792.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|108862690|gb|ABA98278.2| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649299|dbj|BAF29811.1| Os12g0488900 [Oryza sativa Japonica Group]
gi|215697156|dbj|BAG91150.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222617094|gb|EEE53226.1| hypothetical protein OsJ_36125 [Oryza sativa Japonica Group]
Length = 769
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 159/303 (52%), Gaps = 8/303 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G S + K+F + EL+ +G ++ K +E CN Q I+
Sbjct: 458 QNGCRFLQRIFTEGTSENVKKVFDGIIEHIGELVVDPFGNYLVQKLLEECNHDQKMHIVY 517
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT + + S D G+ V+K+I+ + SP + V+ AL LMM G V
Sbjct: 518 EITKRPGQLIKFSCDMHGTRVVQKVIETI-NSPDEVSMVVCALSSGAITLMMDANGCHVA 576
Query: 121 LKCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
L+CL+ S+ HK F+ A+E+ LA QGC + I + ++ Q+L+ I+ A
Sbjct: 577 LRCLQKFSHEHKA-FLLNVAMEYYFELAQDRQGCCIIQKCILHANKEQKNQLLYNITSRA 635
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
LS H+ GNYVVQ++L+L + D I L H+ LS+ K S VV+K LK +
Sbjct: 636 LELSEHQYGNYVVQYILDLHISWATDEILDKLEDHFGSLSMQKSSSNVVEKCLKEASWPK 695
Query: 240 Y--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
I+ EL+N ++L + D YGNYVIQTAL E + +V L+ ++ H+AALR
Sbjct: 696 RVKIIHELINDPKLLHILIDPYGNYVIQTALKEC---EDAAVRAVLIGAIRPHVAALRNN 752
Query: 298 KYG 300
+G
Sbjct: 753 MFG 755
>gi|302783855|ref|XP_002973700.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
gi|300158738|gb|EFJ25360.1| hypothetical protein SELMODRAFT_53500 [Selaginella moellendorffii]
Length = 316
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 164/302 (54%), Gaps = 8/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K S G +DK+F V +LM+ +G ++ K +E N++Q I+
Sbjct: 15 QHGCRFLQKKFSEGSLEEIDKIFAEVIDHLVDLMTDPFGNYLVQKLLEVSNDTQRREILR 74
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T +L + S++ G+ +V+KLI+ + +SP + V S+L + L+ G+ V+
Sbjct: 75 VVTRNGELVNI-SLNMHGTRAVQKLIETL-KSPEQVSMVTSSLMQGVVTLIKDSNGNHVV 132
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ N FI AA HC+ + H GC L ID G++ ++ I+ NA
Sbjct: 133 QKCLQKLSNEDIQFIIDAAARHCVDIGTHRHGCCVLQRCIDFASGTQCHFLVSEIAANAL 192
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
LS+ + GNYVVQ++L+LE ++ + + L G++ L++ K S VV+K LK +++
Sbjct: 193 ILSQDQYGNYVVQYILDLEQSWITLDVIYRLEGNFALLAMQKFSSNVVEKCLKQSSEDSR 252
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ E++ S + Q+ D + NYVIQ AL + S+H LV ++ H+ LR
Sbjct: 253 ALIIREIITSSLLSQLLQDPFANYVIQCALSVA----KGSLHTALVDAIRPHVPVLRSSP 308
Query: 299 YG 300
+G
Sbjct: 309 FG 310
>gi|449452779|ref|XP_004144136.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 698
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 158/301 (52%), Gaps = 6/301 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K G ++K+F + ELM +G ++ K +E CN++Q I+
Sbjct: 392 QHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILR 451
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT ++ S D G+ +++K+I+ + ++ ++ ++SALK LM G+ V
Sbjct: 452 RITQNHGELVMISCDMHGTRAIQKVIETL-KTQEQVHMIVSALKSGIVTLMKNINGNHVA 510
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ + ++ AA C+ LA GC L + + R +++ I+ NA
Sbjct: 511 QHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNAL 570
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-VH 239
+S+ + GNYVVQ +L L + +AI L G+Y DLS+ K S VV+K L++ +
Sbjct: 571 IISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQIT 630
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL+N + ++ D YGNY IQTAL T ++H +LV ++ H+ LR+ Y
Sbjct: 631 KIVLELINDPRFDKIMQDPYGNYAIQTALNNT----EGTLHTKLVEAIRPHVPVLRMSPY 686
Query: 300 G 300
G
Sbjct: 687 G 687
>gi|449493598|ref|XP_004159368.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 731
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 158/301 (52%), Gaps = 6/301 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K G ++K+F + ELM +G ++ K +E CN++Q I+
Sbjct: 425 QHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILR 484
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT ++ S D G+ +++K+I+ + ++ ++ ++SALK LM G+ V
Sbjct: 485 RITQNHGELVMISCDMHGTRAIQKVIETL-KTQEQVHMIVSALKSGIVTLMKNINGNHVA 543
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ + ++ AA C+ LA GC L + + R +++ I+ NA
Sbjct: 544 QHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNAL 603
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-VH 239
+S+ + GNYVVQ +L L + +AI L G+Y DLS+ K S VV+K L++ +
Sbjct: 604 IISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQIT 663
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL+N + ++ D YGNY IQTAL T ++H +LV ++ H+ LR+ Y
Sbjct: 664 KIVLELINDPRFDKIMQDPYGNYAIQTALNNT----EGTLHTKLVEAIRPHVPVLRMSPY 719
Query: 300 G 300
G
Sbjct: 720 G 720
>gi|147789082|emb|CAN75787.1| hypothetical protein VITISV_041015 [Vitis vinifera]
Length = 1051
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/302 (32%), Positives = 158/302 (52%), Gaps = 9/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K + G + K+F + ELM+ +G ++ K +E C E Q I+
Sbjct: 447 QNGCRFLQRKFTDGSPEDVQKIFLEIIDHIVELMTDPFGNYLVQKLLEVCTEDQQMQILH 506
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S + G+ +V+K+I+ + S ++S+LK L+ G+ V
Sbjct: 507 AITRRAGDLVRISCNMHGTRAVQKVIETLRTSE-QFSMIVSSLKPGIVTLIKDMNGNHVA 565
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ +F+ +AA+ +C+ LA GC L + + +R +I++ I+ NA
Sbjct: 566 QCCLQNLMPEYREFLXEAAITNCVELATDRHGCCVLQKCLGHSAVEQRDRIIYEITSNAL 625
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
LS+ GNYVVQ+V E P+ I I L G+Y DLSL K S VV+K L++ H
Sbjct: 626 ILSQDPFGNYVVQYV--FEFPWAIVDILDQLEGNYGDLSLQKYSSNVVEKCLQHAGDEHR 683
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I++EL+N+ +I Q+ D YGNYVIQ AL + ++H L+ ++ H+ LR
Sbjct: 684 HCIIQELINNPRIDQIMQDPYGNYVIQAAL----NNSKGAIHAALIEVIRSHVHVLRTSP 739
Query: 299 YG 300
YG
Sbjct: 740 YG 741
>gi|255545698|ref|XP_002513909.1| conserved hypothetical protein [Ricinus communis]
gi|223546995|gb|EEF48492.1| conserved hypothetical protein [Ricinus communis]
Length = 1204
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 160/300 (53%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G S+ + +F + ELM +G +V KF++ CNE Q I+
Sbjct: 899 QNGCRWLQRIFDEGTSQDIQIIFNEIIDHVVELMLKPFGNYVIQKFLDVCNEEQRLQIVF 958
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + L ++ +G+ +V+KLI+ + + + VM AL+ F L+ + G+ VI
Sbjct: 959 MVTEEPGQLLRICLNTYGTRAVQKLIETLKTRQQISFVVM-ALRPGFLDLVKDQNGNHVI 1017
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ +N N FI+ AA + + +A H GC + I + G R++++ IS NA
Sbjct: 1018 QRCLQCLHNDDNKFIFDAAAKFSVQIATHRHGCCVMQRCITHSTGKHREKLITEISKNAL 1077
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNYVVQ+++ L++P + R HYV LS+ K S VV+K LK+ + +
Sbjct: 1078 LLAQDPFGNYVVQYIVELKNPSAAVNLLSQFRRHYVHLSMQKFSSHVVEKCLKHLEESRE 1137
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL++ + Q+ D + NYVIQ+AL T R S LV ++ H+ LR Y
Sbjct: 1138 QIVHELISVSRFEQLLQDPFANYVIQSALAVTKGPLRAS----LVAAVRPHV-ILRTNPY 1192
>gi|357151863|ref|XP_003575930.1| PREDICTED: pumilio homolog 12-like [Brachypodium distachyon]
Length = 767
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+ + G ++K+F + +LM +G ++ K +E C+E Q I+
Sbjct: 452 QNGCRFLQKVFAQGSQEDVEKVFGEIIDHIGDLMVDPFGNYLVQKLLEGCSEDQRMRILC 511
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T + S + G+ +V+K+I+ + SP + V+SAL LM+ GS V
Sbjct: 512 EVTKMPGQLIAVSCNMHGTRAVQKIIETI-NSPDQVSKVVSALSPGAMHLMLDPNGSHVA 570
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ F+ AA H L LA H+QGC + I++ ++ +L I +A
Sbjct: 571 NRCLQKLLPESKVFLLDAATLHYLELATHQQGCCIIQKCIEHSNDEQKYSLLSNIISSAL 630
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+LS + GNYV+Q +LN + I L GH+ LS+ KCGS VV+ L+ Q+
Sbjct: 631 TLSDDQFGNYVIQSILNHNIGWATCKIVDELEGHFGYLSMQKCGSHVVENCLRQAPQHKR 690
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL+N ++ + D++GN+VIQTAL + ++H V ++ H AA++
Sbjct: 691 DRIIGELMNDPKLPHIMVDQFGNFVIQTALEHC----KGTLHTAFVEAIRPHAAAMQSHM 746
Query: 299 YG 300
YG
Sbjct: 747 YG 748
>gi|115451267|ref|NP_001049234.1| Os03g0191700 [Oryza sativa Japonica Group]
gi|108706609|gb|ABF94404.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113547705|dbj|BAF11148.1| Os03g0191700 [Oryza sativa Japonica Group]
Length = 708
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 8/298 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + D +F + ELM+ + ++ K ++ C+E Q II
Sbjct: 403 QNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEEQRLRIIA 461
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T L S++ G+ S++KLI+ V ++ ++SAL+ F L+ G+ VI
Sbjct: 462 VLTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIML-IISALQPGFIHLVNDPNGNHVI 520
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ +N FI++AA HC+ +A + GC L + I N G + +++ I +
Sbjct: 521 QKCLKNFDAEENKFIFEAAATHCVEMAINRHGCCVLQSCISNAYGEYQIKLIMQICADGL 580
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L++ + GNYV+Q+VL+L+ PF + +G+YV LS K GS VV+K LK +
Sbjct: 581 YLAQDQFGNYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLKVFPDDDK 640
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
I+ EL+++ Q+ D Y NYVI TALV+T R + LV + H A+R
Sbjct: 641 AAIIWELISASHFEQLLQDPYANYVIHTALVQT----RGHLRSALVNAILPHEEAIRT 694
>gi|71018695|ref|XP_759578.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
gi|46099336|gb|EAK84569.1| hypothetical protein UM03431.1 [Ustilago maydis 521]
Length = 1058
Score = 138 bits (348), Expect = 3e-30, Method: Composition-based stats.
Identities = 95/310 (30%), Positives = 159/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL G+ D +F ELM+ +G ++ K +E C + Q LI+
Sbjct: 552 QHGCRFLQKKLEEGNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDEQRNLIVE 611
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + S++ G+ +V+K+I ++ +P ++ ++ AL L+ G+ V+
Sbjct: 612 LVAPE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIKDLNGNHVV 667
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A HC+ +A H GC L ID+ ++R Q++ I+ NA
Sbjct: 668 QKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLVAEITYNAL 727
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ+VL+L P DA+ G+ LS+ K S V++K ++
Sbjct: 728 TLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKCIRVSEPGVR 787
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELLN ++ ++ D + NYV+QT+L R+ RLV ++ L +R
Sbjct: 788 KQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRM----RLVECIRPILPVIRNTP 843
Query: 299 YGSNKEIQKK 308
YG K IQ K
Sbjct: 844 YG--KRIQSK 851
>gi|356557551|ref|XP_003547079.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 770
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 157/301 (52%), Gaps = 7/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + +F + ELM +G ++ K ++ C+E+Q +IL
Sbjct: 463 QHGCRFLQRIFDEGTPEDVQVIFNEIIDHVVELMMNPFGNYLMQKLLDVCDENQRMQMIL 522
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+K+I+ + ++ + V++AL+ F L+ G+ V+
Sbjct: 523 MVTEEPGQLVRISLNTHGTRVVQKVIETL-KTRQQISLVVAALEPGFLALIKDLNGNHVV 581
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ N N FI+ AA ++C+ +A H+ GC L I + +G R++++ IS NA
Sbjct: 582 QHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEHREKLVEEISANAL 641
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ + GNYVVQ +L+L P + G YV LS+ K GS VV+K L N +
Sbjct: 642 LLAQDQFGNYVVQFILDLRIPSATATLSLQFEGKYVHLSMQKFGSHVVEKCLAVFNDENR 701
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ ELL++ Q+ D + NYVIQ+A+ R VH LV ++ H A R
Sbjct: 702 SRVIHELLSAPHFEQLLQDPHANYVIQSAV----RHSEGHVHNLLVEAIESHKAISRNSP 757
Query: 299 Y 299
Y
Sbjct: 758 Y 758
>gi|308812071|ref|XP_003083343.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
gi|116055223|emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) (ISS) [Ostreococcus tauri]
Length = 340
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL----- 55
+ G ++LQ K S+ +D + + ELM +G ++ K IE C++ Q
Sbjct: 22 QHGCRFLQRKFDEEGSKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCSDEQRSGVLR 81
Query: 56 ALIILKITFQDQLFLLASV--DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT 113
A+ ++K D L L ++ + G+ +V+KLI+++ SP + +AL+ L+
Sbjct: 82 AVSVVKADNPDGLPELVTIALNTHGTRAVQKLIEML-NSPEEVSLATTALRPGVVTLIKD 140
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI +CL+ N FIY AA HC+ +A H GC L ID+ +R+ ++H
Sbjct: 141 LNGNHVIQRCLQRLSCDDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHATEEQRRPLVH 200
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ A LS+ GNYVVQ++L+L + + L G+Y +LS+ K S VV+K LK
Sbjct: 201 EIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSSNVVEKCLK 260
Query: 234 YQNAV-----HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+A + +V E++ S + ++ D YGNYV+Q+ L T + +H LV +++
Sbjct: 261 LADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVT----KGVLHTELVERIR 316
Query: 289 QHLAALRVMKYG 300
HL ++ +G
Sbjct: 317 PHLPLIKNSPFG 328
>gi|85083831|ref|XP_957198.1| hypothetical protein NCU01775 [Neurospora crassa OR74A]
gi|18376126|emb|CAD21191.1| conserved hypothetical protein [Neurospora crassa]
gi|28918285|gb|EAA27962.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 677
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E C+E + ++I
Sbjct: 278 QHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIR 337
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + +++ G+ +++K+I V+ SP + ++ AL+ L+ G+ VI
Sbjct: 338 NATSD---MVRIALNAHGTRALQKMIDSVS-SPAQINLIIEALRNRVVELIQDLNGNHVI 393
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A ++C+ + H GC L ID+ G+++ ++ I+ NA
Sbjct: 394 QKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITANAV 453
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++++L +P + + G LS K S VV+K L+ N+
Sbjct: 454 TLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASPNSK 513
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV E+++ ++I Q+ D YGNYV+QTAL S+ +LV ++ HL A+R
Sbjct: 514 DRIVSEIMSQNEIKQLMQDSYGNYVVQTALDYATP----SMKHQLVEAIRPHLPAVRATP 569
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 570 YG--RRIQAK 577
>gi|336468401|gb|EGO56564.1| hypothetical protein NEUTE1DRAFT_65206 [Neurospora tetrasperma FGSC
2508]
gi|350289343|gb|EGZ70568.1| ARM repeat-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 676
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 161/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E C+E + ++I
Sbjct: 277 QHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIR 336
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + +++ G+ +++K+I V+ SP + ++ AL+ L+ G+ VI
Sbjct: 337 NATSD---MVRIALNAHGTRALQKMIDSVS-SPAQINLIIEALRNRVVELIQDLNGNHVI 392
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A ++C+ + H GC L ID+ G+++ ++ I+ NA
Sbjct: 393 QKCLNKLNATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGAKKIWLIERITANAV 452
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++++L +P + + G LS K S VV+K L+ N+
Sbjct: 453 TLVQDPFGNYVVQYIIDLNEPSFTEPLVGQFLGRIPQLSKHKFSSNVVEKCLRCASPNSK 512
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV E+++ ++I Q+ D YGNYV+QTAL S+ +LV ++ HL A+R
Sbjct: 513 DRIVSEIMSQNEIKQLMQDSYGNYVVQTALDYATP----SMKHQLVEAIRPHLPAVRATP 568
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 569 YG--RRIQAK 576
>gi|356528751|ref|XP_003532961.1| PREDICTED: uncharacterized protein LOC100780898 [Glycine max]
Length = 763
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 155/301 (51%), Gaps = 7/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + +F + ELM +G ++ K ++ C+E Q IIL
Sbjct: 456 QHGCRFLQRIFDEGTPEDVQVIFNEIIDHVAELMMNPFGNYLMQKLLDVCDEKQRMQIIL 515
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+KLI+ + ++ + V++AL+ F L+ G+ V+
Sbjct: 516 MVTEEPGQLVRISLNIHGTRVVQKLIETL-KTRQQISLVVAALEPGFLALIKDLNGNHVV 574
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ N N FI+ AA ++C+ +A H+ GC L I + +G R++++ IS NA
Sbjct: 575 QHCLQCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSRGEHREKLVEEISANAL 634
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ + GNYVVQ +L+L P + YV LS+ K GS VV+K L N +
Sbjct: 635 LLAQDQFGNYVVQFILDLRIPSATATLSLQFERKYVHLSMQKFGSHVVEKCLAVFNDENQ 694
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ ELL++ Q+ D + NYVIQ+AL R VH LV ++ H A R
Sbjct: 695 SRVIHELLSAPHFEQLLQDPHANYVIQSAL----RHSEGHVHNLLVEAIESHKAISRNSP 750
Query: 299 Y 299
Y
Sbjct: 751 Y 751
>gi|66804327|ref|XP_635942.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
gi|60464289|gb|EAL62439.1| hypothetical protein DDB_G0289987 [Dictyostelium discoideum AX4]
Length = 1036
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 162/314 (51%), Gaps = 18/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL D ++ + +F V + ELM+ +G ++ K +E CN+ Q II
Sbjct: 723 QHGCRFLQKKLEESDLQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDRQRLTIIE 782
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + S++ G+ +V+K+I+ + +P + + +LK L+ G+ VI
Sbjct: 783 KVGTD---IVRISMNMHGTRAVQKMIEYLT-TPEQIQLIKRSLKDSVVPLIQDLNGNHVI 838
Query: 121 LKCLEPSYNHKNDFIYQAALEH--CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL N FIY A C+ +A H GC L ID+ S++ Q++ + N
Sbjct: 839 QKCLNKLSPQDNQFIYDAVSSDGSCIAVATHRHGCCVLQRCIDHASESQKLQLIQEVIAN 898
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALR--GHYVDLSLTKCGSFVVQKFLKYQN 236
+ L + GNYVVQ+VL+L PF A A R GH L+ K S VV+K L +
Sbjct: 899 SLVLVQDPYGNYVVQYVLDL--PFQGLATEMAKRFVGHVPILATQKFSSNVVEKCLHVAD 956
Query: 237 AVH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
A+ Y+++E+++ D +L + D Y NYVIQT+L + H +LV ++ HL L
Sbjct: 957 AITRGYLIQEVIDYDNLLHLLQDPYANYVIQTSLTISEPHQ----HTKLVEAIRPHLPLL 1012
Query: 295 RVMKYGSNKEIQKK 308
+ YG K IQ K
Sbjct: 1013 KNTPYG--KRIQNK 1024
>gi|242085540|ref|XP_002443195.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
gi|241943888|gb|EES17033.1| hypothetical protein SORBIDRAFT_08g015000 [Sorghum bicolor]
Length = 678
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 157/302 (51%), Gaps = 6/302 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G K+F V ELM +G ++ K +E CN++Q I+
Sbjct: 367 QNGCRFLQRIFTEGSQEDAQKVFDGVIEHIDELMIDPFGNYLIQKLLEQCNDNQKMHILY 426
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT + + + G+ V+K+I+ V+ S + V+SAL LMM GS V
Sbjct: 427 EITKIPGQLVKVACNMHGTRVVQKVIETVSTSDEVSM-VVSALSHGAITLMMDANGSHVA 485
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ F+ AA ++C+ LA QGC + I + ++ ++L+ I+ A
Sbjct: 486 HRCLQKLSPKCKAFLLNAATKYCVELAKDRQGCCIIQKCIIHANKEQKNKLLYSITGRAL 545
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
+L+ H+ GNYV+Q +L+L+ + ++ I L G Y LS+ KC S VV+K LK
Sbjct: 546 NLAEHQYGNYVIQFILDLKVTWAMNEILDKLEGSYGYLSMQKCSSNVVEKCLKEARGPKR 605
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL+N ++ + D+YGNYVIQTA E +V LV ++ H++ALR
Sbjct: 606 AKIILELINDPKLQNILLDQYGNYVIQTAFREC---GDAAVEAALVRAIKPHISALRNNM 662
Query: 299 YG 300
+G
Sbjct: 663 FG 664
>gi|319411787|emb|CBQ73830.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 1016
Score = 135 bits (341), Expect = 2e-29, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL + D +F ELM+ +G ++ K +E C + Q LI+
Sbjct: 542 QHGCRFLQKKLEESNPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDEQRNLIVE 601
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + S++ G+ +V+K+I ++ +P ++ ++ AL L+ G+ V+
Sbjct: 602 LVASE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIKDLNGNHVV 657
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A HC+ +A H GC L ID+ ++R Q++ I+ NA
Sbjct: 658 QKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRVQLVAEITYNAL 717
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ+VL+L P DA+ G+ LS+ K S V++K ++
Sbjct: 718 TLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVMEKCIRVSEPGVR 777
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELLN ++ ++ D + NYV+QT+L R+ RLV ++ L +R
Sbjct: 778 KQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADPVQRM----RLVECIRPILPVIRNTP 833
Query: 299 YGSNKEIQKK 308
YG K IQ K
Sbjct: 834 YG--KRIQSK 841
>gi|393247747|gb|EJD55254.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 1028
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 160/312 (51%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G ELM+ +G ++ K +E ++ Q +I
Sbjct: 593 QHGCRYLQKKLEEGVPEHRDIIFHETFGHFAELMTDPFGNYLCQKLVEFSSDEQRNVICE 652
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ +P ++ ++ AL L+ G+ VI
Sbjct: 653 SVA---QDLVTISLNMHGTRAVQKMIDFLS-TPRQIHAIIVALSLHVVTLIKDLNGNHVI 708
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A ++C+ +A H GC L ID+ S+R Q++ I+ NA
Sbjct: 709 QKCLNKLVPEDNQFIYNAVAQNCVEVATHRHGCCVLQRCIDHASDSQRVQLVQEITYNAL 768
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+L + GNYVVQ++L+L D D + G+ LS+ K S V++K ++ +
Sbjct: 769 TLVQDPYGNYVVQYILDLNDNRFSDGVIRQFSGNVCALSVQKFSSNVIEKCVRVAEPHTR 828
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
+++ELL+ +++ ++ D +GNY +QTAL D QR LV ++ L +R
Sbjct: 829 KLLIDELLHRNRLEKLLRDSFGNYCVQTAL------DYAEPTQRALLVEGIRPILPMIRN 882
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 883 TPYG--KRIQSK 892
>gi|336272059|ref|XP_003350787.1| hypothetical protein SMAC_12592 [Sordaria macrospora k-hell]
gi|380094950|emb|CCC07452.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 670
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 18/313 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E C+E + ++I
Sbjct: 254 QHGCRYLQKKLDDRNEEQIHMIWLETNQHVIELMTDPFGNYLCQKLLELCSEDERTVLIR 313
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + +++ G+ +++K+I V+ SP + ++ AL+ L+ G+ VI
Sbjct: 314 NATPD---MVRIALNAHGTRALQKMIDSVS-SPVQINLIIEALRNRVVELIQDLNGNHVI 369
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A ++C+ + H GC L ID+ GS++ ++ I+ NA
Sbjct: 370 QKCLNKLDATDASFIFDAVGQNCVEVGTHRHGCCVLQRCIDHADGSKKIWLIERITANAV 429
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++++L +P + + G LS K S VV+K L+ N+
Sbjct: 430 TLVQDPFGNYVVQYIIDLNEPSFTEPLVRQFLGRIPQLSKHKFSSNVVEKCLRCASPNSK 489
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL---VETMRQDRLSVHQRLVTKLQQHLAALR 295
IV E+++ ++I Q+ D YGNYV+QTAL M+ HQ LV ++ HL A+R
Sbjct: 490 DMIVSEIMSQNEIKQLMQDSYGNYVVQTALDYATPGMK------HQ-LVEAIRPHLPAVR 542
Query: 296 VMKYGSNKEIQKK 308
YG + IQ K
Sbjct: 543 ATPYG--RRIQAK 553
>gi|328866633|gb|EGG15016.1| hypothetical protein DFA_09838 [Dictyostelium fasciculatum]
Length = 1352
Score = 135 bits (339), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/312 (30%), Positives = 161/312 (51%), Gaps = 14/312 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL GD + + +F V + ELM+ +G ++ K +E CN+ Q +II
Sbjct: 1042 QHGCRFLQKKLEEGDEPLTELIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDRQRLVIID 1101
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + S++ G+ +V+K+I+ + +P + + +L + L+ G+ VI
Sbjct: 1102 KVGPD---IVRISMNMHGTRAVQKMIEFLT-TPEQIALIKKSLAQHVVPLIQDLNGNHVI 1157
Query: 121 LKCLEPSYNHKNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL N FIY + + +C+ +A H GC L ID+ +++ Q++ + N
Sbjct: 1158 QKCLNKLAPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASETQKVQLIQEVIAN 1217
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYVVQ+VL+L P L + GH L+ K S VV+K L + +
Sbjct: 1218 SLVLVQDPFGNYVVQYVLDLPFPGLTCEMAKRFVGHVSILATQKFSSNVVEKCLHVADPI 1277
Query: 239 HY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+++EL++ D +L + D + NYVIQT+L H +LV ++ HLA L+
Sbjct: 1278 TRGNLIQELIDCDTLLHLLQDPFANYVIQTSLTIAEPHQ----HTKLVEAIKPHLAQLKN 1333
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 1334 TPYG--KRIQNK 1343
>gi|156059478|ref|XP_001595662.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980]
gi|154701538|gb|EDO01277.1| hypothetical protein SS1G_03751 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1085
Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 159/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 675 QHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDEERTVLIE 734
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ +P + ++ AL+ L+ G+ VI
Sbjct: 735 NASHD---LVRIALNQHGTRALQKMIEFIS-TPGQVQTIIGALRFRVVELIQDLNGNHVI 790
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 791 QKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLIRQISNNAY 850
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L +P + + G LS K S V++K L+ + +
Sbjct: 851 VLVQDPFGNYVVQYILDLNEPIFTEPLVAMFGGRVAQLSKQKFSSNVIEKCLRCAQEPSK 910
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L +Q+ + D + NYVIQTAL ++ RL+ ++ HL A+R
Sbjct: 911 DMLIEEMLQPNQLDSLLRDSFANYVIQTAL----DYANPNMKTRLIEAIRPHLPAIRTTP 966
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 967 YG--RRIQAK 974
>gi|393218870|gb|EJD04358.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1018
Score = 134 bits (338), Expect = 4e-29, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 160/319 (50%), Gaps = 22/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G++ D +F G ELM+ +G ++ K +E + Q +I
Sbjct: 548 QHGCRYLQKKLEEGNAEHRDMIFRETFGHFAELMTDPFGNYLCQKLLEYSTDDQRNVICE 607
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYH-----VMSALKRLFKFLMMT 113
+ Q + S++ G+ +V+K+I ++ + L Y+ ++ AL L+
Sbjct: 608 SVA---QDLVNISLNMHGTRAVQKMIDFLSTQRQADLRYNAQIHSIIVALSLHVVVLIKD 664
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++
Sbjct: 665 LNGNHVIQKCLNKLTPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRIQLVN 724
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 725 EITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCIR 784
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
N ++EELLN ++ ++ D +GNY +QTAL D QR LV ++
Sbjct: 785 VAEHNTRKMLIEELLNRTRLEKLLRDSFGNYCVQTAL------DYAESGQRALLVEGIRP 838
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 839 ILPLIRNTPYG--KRIQSK 855
>gi|409051228|gb|EKM60704.1| hypothetical protein PHACADRAFT_246773 [Phanerochaete carnosa
HHB-10118-sp]
Length = 976
Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G ELM+ +G ++ K +E C + Q LI
Sbjct: 552 QHGCRYLQKKLEEGVPEHRDMIFRETFGHFPELMTDPFGNYLCQKLLEYCTDEQRNLICE 611
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 612 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQI-HSIIVALSLHVVVLIKDLNGNHVI 667
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L +D+ +R Q+++ I+ NA
Sbjct: 668 QKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCVDHASEPQRIQLVNEITYNAL 727
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++ +
Sbjct: 728 TLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVRVAEHSTR 787
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
++ ELLN ++ ++ D YGNY +QTAL D QR LV ++ L +R
Sbjct: 788 KMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPTQRALLVEGIRPVLPLIRN 841
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 842 TPYG--KRIQNK 851
>gi|154316386|ref|XP_001557514.1| hypothetical protein BC1G_04124 [Botryotinia fuckeliana B05.10]
Length = 1088
Score = 134 bits (337), Expect = 5e-29, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 678 QHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDEERTVLIE 737
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ + + ++ AL+ L+ G+ VI
Sbjct: 738 NASHD---LVRIALNQHGTRALQKMIEFISTAGQV-QTIIGALRYRVVELIQDLNGNHVI 793
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 794 QKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLIRQISNNAY 853
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L +P + + G LS K S V++K L+ + +
Sbjct: 854 VLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKCLRCAQEPSK 913
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L Q+ + D + NYVIQTAL L++ RL+ ++ HL A+R
Sbjct: 914 DMLIEEMLQPTQLDGLLRDSFANYVIQTAL----DYANLNMKTRLIEAIRPHLPAIRTTP 969
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 970 YG--RRIQAK 977
>gi|224063219|ref|XP_002301047.1| predicted protein [Populus trichocarpa]
gi|222842773|gb|EEE80320.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 160/300 (53%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +LQ+ G S+ ++ +F + G ELM +G +V K ++ C+E LI+
Sbjct: 22 QNGCLFLQKIFEEGTSQDVELIFDEIIGHIVELMLKPFGNYVVQKLLDVCDEKHRLLIVR 81
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + + ++ +G+ V++LI+ + ++ + V+ ALK L+ + G+ VI
Sbjct: 82 MITNEPGMLVRICLNTYGTRVVQRLIETL-KTRQQISSVILALKPGVLDLVKDQNGNHVI 140
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL N N FI+ AA + C+ +A H GC + I + G +++ IS N
Sbjct: 141 QRCLNLLSNEDNKFIFDAATKFCVEIATHRHGCCVMQRCIAHATGKHWDKLMTEISRNGL 200
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-KYQNAVH 239
L++ GNYVVQ++++L++ I + +G+YV LS+ K GS VV++ L ++ +
Sbjct: 201 LLAQDPFGNYVVQYIMDLKNSCSIAILLSQFKGNYVHLSMQKFGSHVVERCLGHFEESRS 260
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV ELL+ + Q+ D + NYVIQ AL T + ++H LV ++ H + LR Y
Sbjct: 261 QIVLELLSVPRFEQLLQDPFANYVIQCALAVT----KGALHSLLVEAVRPH-STLRTSPY 315
>gi|296422247|ref|XP_002840673.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636894|emb|CAZ84864.1| unnamed protein product [Tuber melanosporum]
Length = 971
Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats.
Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 15/313 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + + +F ELM+ +G ++ K +E N+ Q +++
Sbjct: 606 QHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNYLCQKLLEYANDEQRTVLV- 664
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T QL +A +++ G+ +++K+I+ + +P + V+ AL+ L+ G+ VI
Sbjct: 665 -NTAAPQLVKIA-LNQHGTRALQKMIEYIT-TPEQICTVIHALQSKVVELIQDLNGNHVI 721
Query: 121 LKCLEPSYNHKN--DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL +N FI+ A E C+ + H GC L ID+ G+++ +++ I+ +
Sbjct: 722 QKCLNRWKKEENKLQFIFDAVGEDCVAVGTHRHGCCVLQRCIDHAAGAQKVKLIQKITAH 781
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-- 236
A L GNYVVQ++L+L DP L + + RG +LS K S V++K ++
Sbjct: 782 AIELVVDPFGNYVVQYILDLADPMLSEPLILKFRGRVCELSKQKFSSNVIEKCIRVAEPP 841
Query: 237 AVHYIVEELL-NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++EE+L N ++ + D Y NYVIQTA+ + + Q+LV ++ L A+R
Sbjct: 842 TKKILIEEMLPNQAELEALLRDSYANYVIQTAMDYASPETK----QQLVDSIRPILPAIR 897
Query: 296 VMKYGSNKEIQKK 308
+ YG + IQ K
Sbjct: 898 MTPYG--RRIQSK 908
Score = 37.4 bits (85), Expect = 9.6, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L ++ N L + + G +Q L +P + I H V+L G+++ QK
Sbjct: 592 LESLTGNIYELCKDQHGCRYLQKKLEERNPQYVQMIFLETHAHVVELMTDPFGNYLCQKL 651
Query: 232 LKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVH--QRLVTKL 287
L+Y N V + Q++++A +++G +Q + + T Q +H Q V +L
Sbjct: 652 LEYANDEQRTVLVNTAAPQLVKIALNQHGTRALQKMIEYITTPEQICTVIHALQSKVVEL 711
Query: 288 QQHLAALRVMKYGSNK 303
Q L V++ N+
Sbjct: 712 IQDLNGNHVIQKCLNR 727
>gi|390603815|gb|EIN13206.1| ARM repeat-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1019
Score = 132 bits (333), Expect = 1e-28, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G +LM+ +G ++ K +E + Q LI
Sbjct: 578 QHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYATDEQRNLICE 637
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 638 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQI-HSIIVALSLHVVVLIKDLNGNHVI 693
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ +R Q+++ I+ NA
Sbjct: 694 QKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDQQRVQLVNEITYNAL 753
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L D D + G+ LS+ K S V++K ++ +
Sbjct: 754 TLVQDPYGNYVVQYILDLNDNRFSDGVIRQFTGNVCALSVQKFSSNVIEKCIRVAEHSTR 813
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
++EELLN ++ ++ D YGNY +QTAL D QR LV ++ L +R
Sbjct: 814 KLLIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPGQRALLVEGIRPVLPLIRN 867
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 868 TPYG--KRIQNK 877
>gi|388855017|emb|CCF51344.1| uncharacterized protein [Ustilago hordei]
Length = 1013
Score = 131 bits (330), Expect = 3e-28, Method: Composition-based stats.
Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL D +F ELM+ +G ++ K +E C + Q LI+
Sbjct: 542 QHGCRFLQKKLEESMPAHRDMIFSETFTHFAELMTDPFGNYLCQKMLEYCTDEQRNLIVE 601
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + S++ G+ +V+K+I ++ + + ++ AL L+ G+ V+
Sbjct: 602 LVAPE---LVTISLNMHGTRAVQKMIDFLSTRRQI-HSIIVALSMNVVTLIKDLNGNHVV 657
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A HC+ +A H GC L ID+ S+R Q++ I+ NA
Sbjct: 658 QKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLVAEITYNAL 717
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ+VL+L P DA+ G+ LS+ K S V++K ++
Sbjct: 718 TLVQDPFGNYVVQYVLDLSIPRFTDAVVRQFVGNVCLLSVQKFSSNVIEKCIRVSEPGVR 777
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELLN ++ ++ D + NYV+QT+L R+ RLV ++ L +R
Sbjct: 778 KQLIEELLNRTRLEKLLRDSFANYVVQTSLDYADAVQRM----RLVECIRPILPVIRNTP 833
Query: 299 YGSNKEIQKK 308
YG K IQ K
Sbjct: 834 YG--KRIQSK 841
>gi|255085754|ref|XP_002505308.1| predicted protein [Micromonas sp. RCC299]
gi|226520577|gb|ACO66566.1| predicted protein [Micromonas sp. RCC299]
Length = 336
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 13/308 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K ++ F + +LM +G ++ K +E C + Q ++
Sbjct: 22 QHGCRFLQRKFDEEGEEAVNLCFEEIIAEVVDLMMDPFGNYLVQKLLECCTDEQRMGVLR 81
Query: 61 KITFQ-DQLFLLASV--DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
+ D + L SV + G+ +V+KL++ + ++P + ALK L+ G+
Sbjct: 82 AVAKDGDGVPELVSVALNTHGTRAVQKLVETL-RTPEQVALATEALKPGVVTLIKDLNGN 140
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI +CL+ N F+Y AA + C+ +A H GC L ID+ +R+ ++ I+
Sbjct: 141 HVIQRCLQRLGAEDNQFVYDAARKCCVEIATHRHGCCVLQRCIDHAADGQRRALVQEIAA 200
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
A LS+ GNYVVQ++L+L P+ + L G+Y +LS+ K S VV+K LK +A
Sbjct: 201 QALVLSQDPFGNYVVQYILDLSLPWANAEVMMRLAGNYAELSMQKFSSNVVEKCLKLADA 260
Query: 238 V-----HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +V E++ S + ++ D YGNYV+Q+ L T + ++H LV +++ HL
Sbjct: 261 SLEEHRNVVVREIMTSPLLDRLLMDPYGNYVVQSTLSVT----KGALHSELVDRIRPHLP 316
Query: 293 ALRVMKYG 300
++ +G
Sbjct: 317 LIKNSPFG 324
>gi|145354443|ref|XP_001421494.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581731|gb|ABO99787.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]
Length = 326
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 17/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL----- 55
+ G ++LQ K ++ +D + + ELM +G ++ K IE C++ Q
Sbjct: 10 QHGCRFLQRKFDEEGAKAVDLCYDEIIAEAVELMMDPFGNYLVQKLIECCSDEQRSGVLR 69
Query: 56 ALIILKITFQDQLFLLASV--DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT 113
A+ ++K D L L ++ + G+ +V+KLI+++ SP + +AL+ L+
Sbjct: 70 AVSVVKDDSLDGLPELVTIALNTHGTRAVQKLIEML-NSPEEVSLATNALRPGVVTLIKD 128
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI +CL+ + N FIY AA HC+ +A H GC L ID+ +R+ ++
Sbjct: 129 LNGNHVIQRCLQRLSSEDNQFIYDAAKVHCVEIATHRHGCCVLQRCIDHAIDEQRRPLVL 188
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ A LS+ GNYVVQ++L+L + + L G+Y +LS+ K S VV+K LK
Sbjct: 189 EIASQALVLSQDPFGNYVVQYILDLGLSWANGEVMTQLLGNYAELSMQKFSSNVVEKCLK 248
Query: 234 YQNAV-----HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+A + +V E++ S + ++ D YGNYV+Q+ L T + +H LV +++
Sbjct: 249 LADASLEKNRNTVVREIMQSPLLDRLLMDPYGNYVVQSTLTVT----KGVLHTELVERIR 304
Query: 289 QHLAALRVMKYG 300
HL ++ +G
Sbjct: 305 PHLPLIKNSPFG 316
>gi|299755883|ref|XP_001828946.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|298411424|gb|EAU92953.2| pumilio-family RNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 982
Score = 131 bits (329), Expect = 4e-28, Method: Composition-based stats.
Identities = 97/312 (31%), Positives = 155/312 (49%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F ELM+ +G ++ K +E + Q LI
Sbjct: 572 QHGCRYLQKKLEEGVPEHRDMIFRETFKHFAELMTDPFGNYLCQKLLEFATDDQRNLICE 631
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 632 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQI-HSIILALSLHVVSLIKDLNGNHVI 687
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ ++R Q+++ I+ NA
Sbjct: 688 QKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEAQRIQLVNEITYNAL 747
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L D D + G+ LS+ K S V++K ++ N
Sbjct: 748 TLVQDPYGNYVVQYILDLNDNRFSDGVIRQFLGNICALSVQKFSSNVMEKCIRVAEHNTR 807
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
++EELLN ++ ++ D YGNY +QTAL D QR LV ++ L +R
Sbjct: 808 KLVIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPGQRALLVEGIRPVLPLIRN 861
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 862 TPYG--KRIQNK 871
>gi|407917960|gb|EKG11259.1| hypothetical protein MPH_11603 [Macrophomina phaseolina MS6]
Length = 1088
Score = 131 bits (329), Expect = 5e-28, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+++ + I+ K+F +LM + ++ K E CN+ Q ++
Sbjct: 676 QHGCRYLQKQIEGRNLDIVRKIFEATKDHVVDLMQDPFANYLCQKMYEFCNDEQRTALVH 735
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ V+ + + ++ AL+ L+ G+ VI
Sbjct: 736 NAAPQ---MVKIALNQHGTRALQKMIEYVSTAEQINI-IIEALRHNVVTLIQDLNGNHVI 791
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + FI++A C+ + H GC L ID+ G +R ++ I+ NA
Sbjct: 792 QKCLNHLGSKDSQFIFEAVGAACIVVGTHRHGCCVLQRCIDHASGDQRIALIGAITANAY 851
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
SL + GNYVVQ++L+L++ +C A RG+ LS K S VV+K ++ NA
Sbjct: 852 SLVQDPFGNYVVQYILDLQEEQFTIPMCNAFRGNVPMLSKQKFSSNVVEKCIRVSNAETR 911
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELL ++ ++ D Y NYV+QT+L ++ RLV ++ L+A+R
Sbjct: 912 RNLIEELLIPGELEKLIRDSYANYVVQTSLDYADAPTKI----RLVEAIRPMLSAIRTTP 967
Query: 299 YG 300
YG
Sbjct: 968 YG 969
>gi|396458556|ref|XP_003833891.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
gi|312210439|emb|CBX90526.1| similar to mRNA binding protein Pumilio 2 [Leptosphaeria maculans
JN3]
Length = 1025
Score = 130 bits (328), Expect = 6e-28, Method: Composition-based stats.
Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL + + +F + ELM+ +G ++ K +E CN+ Q ++
Sbjct: 625 QHGCRFLQKKLEDRNHEHIQIIFEETNPHVVELMTDPFGNYLCQKLLEFCNDEQRNTLVR 684
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ + ++ AL L+ G+ VI
Sbjct: 685 NAS---PAMVSIALNQHGTRALQKMIEYIS-TEDQTQMIIQALSGQVVDLIQDLNGNHVI 740
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A EHC+ + H GC L ID+ G ++ ++H I+ NA
Sbjct: 741 QKCLNHLKPSEAQFIFDAVGEHCVTVGTHRHGCCVLQRCIDHAAGYQKIDLVHRITQNAF 800
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
SL + GNYVVQ++L+L D +C + G +LS K S V++K ++ N A
Sbjct: 801 SLVQDPFGNYVVQYILDLNDENFTTPMCKSFEGRVPELSKQKFSSNVIEKCIRCANMDAK 860
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++ELL+ ++ + D+YGNYVIQTAL L++H L+ ++ L +R
Sbjct: 861 AMMIQELLDMVELEMLMRDQYGNYVIQTAL--EFAPGELALH--LIESMRPILPTIRATP 916
Query: 299 YG 300
YG
Sbjct: 917 YG 918
>gi|359492558|ref|XP_003634432.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Vitis
vinifera]
Length = 574
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 157/304 (51%), Gaps = 10/304 (3%)
Query: 1 EEGSQYLQEKLSSGDS-RILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G ++LQEKL + + + ++ +F V +LM Q+G +V K +E CNE Q I+
Sbjct: 260 QHGCRFLQEKLQNNVTVKEIEMIFSEVIHHVAQLMLDQFGNYVVQKLVEICNEEQRTQIL 319
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
L T + ++ G+ ++KL++ + +P + MSAL + L G V
Sbjct: 320 LSATTNQYQLIFICLNMHGTRVMQKLLEYLT-TPEQISIAMSALWPVTVALTKDTSGHHV 378
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I CL+ N ++ + E+C +A + GC L + ++N +G R+Q++ I NA
Sbjct: 379 IQHCLKLFSCQDNMYLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANA 438
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL---KYQN 236
L+ R GNYVVQH++ L+ P +I + G ++ LS K GS VV+KFL K +
Sbjct: 439 LPLAEDRYGNYVVQHLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQ 498
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+ I+ ELL S + + D +GN+VIQ+AL + + + LV ++ H ++R
Sbjct: 499 SSQIII-ELLRSPNVSMLLLDPFGNFVIQSALSVS----KGHIRNALVNLVRLHAPSMRS 553
Query: 297 MKYG 300
YG
Sbjct: 554 NLYG 557
>gi|406863177|gb|EKD16225.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1055
Score = 130 bits (327), Expect = 7e-28, Method: Composition-based stats.
Identities = 84/310 (27%), Positives = 160/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 640 QHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIE 699
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ +P + ++ AL+ L+ G+ VI
Sbjct: 700 NASHD---LVRIALNQHGTRALQKMIEFIS-TPGQIQTIIEALRHRVVELIQDLNGNHVI 755
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 756 QKCLNKLSSTDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGEQKAWLIRQISNNAY 815
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L +P + + +G LS K S V++K L+ + +
Sbjct: 816 VLVQDPFGNYVVQYILDLNEPTFTEPLVAMFQGRVGQLSKQKFSSNVIEKCLRCAQEPSK 875
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L ++ ++ D + NYVIQTAL ++ RL+ ++ +L A+R
Sbjct: 876 DMLIEEMLQPAELDRLLRDSFANYVIQTAL----DYANPNMKARLIEAIRPYLPAIRTTP 931
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 932 YG--RRIQAK 939
>gi|426201649|gb|EKV51572.1| hypothetical protein AGABI2DRAFT_114299 [Agaricus bisporus var.
bisporus H97]
Length = 975
Score = 130 bits (327), Expect = 8e-28, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F ELM+ +G ++ K +E + Q LI
Sbjct: 543 QHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATDEQRNLICE 602
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 603 SVA---QELVNISLNMHGTRAVQKMIDFLSTRRQI-HSIILALSLHVVALIKDLNGNHVI 658
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ +R Q+++ I+ NA
Sbjct: 659 QKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLVNEITYNAL 718
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L D DA+ +G+ LS+ K S V++K ++ +
Sbjct: 719 TLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCVRVAEHSTR 778
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
+++ELLN ++ ++ D YGNY +QTAL D QR LV ++ L +R
Sbjct: 779 KLLIDELLNRSRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIRPVLPLIRN 832
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 833 TPYG--KRIQNK 842
>gi|330805438|ref|XP_003290689.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
gi|325079152|gb|EGC32766.1| hypothetical protein DICPUDRAFT_155226 [Dictyostelium purpureum]
Length = 926
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/315 (31%), Positives = 162/315 (51%), Gaps = 20/315 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL D ++ + +F V + ELM+ +G ++ K +E CN+ Q II
Sbjct: 613 QHGCRFLQKKLEESDPQLTEIIFKEVCDYMLELMTDPFGNYLCQKLLEHCNDQQRLTIIE 672
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + S++ G+ +V+K+I+ + +P + + +LK L+ G+ VI
Sbjct: 673 KVGTD---IVRISMNMHGTRAVQKMIEYLT-TPEQIELIKRSLKDSVVQLIQDLNGNHVI 728
Query: 121 LKCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL N FIY + +C+ +A H GC L ID+ S++ Q++ + N
Sbjct: 729 QKCLNKLSPQDNQFIYDSVSSDGNCVAVATHRHGCCVLQRCIDHASESQKLQLIQEVIAN 788
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALR--GHYVDLSLTKCGSFVVQKFLKYQN 236
+ L + GNYVVQ+VL+L PF A A R GH L+ K S VV+K L +
Sbjct: 789 SLVLVQDPYGNYVVQYVLDL--PFQGLATEMAKRFVGHVPILATQKFSSNVVEKCLHVAD 846
Query: 237 AVHY--IVEELLNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
A +++E+++ D +L + D Y NYVIQT+L + Q H +LV ++ HL
Sbjct: 847 ATTRGNLIQEVIDYDNLLYLLQDPYANYVIQTSLSISEPHQ-----HTKLVEAIRPHLPL 901
Query: 294 LRVMKYGSNKEIQKK 308
L+ YG K IQ K
Sbjct: 902 LKNTPYG--KRIQNK 914
>gi|409083297|gb|EKM83654.1| hypothetical protein AGABI1DRAFT_88582 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 979
Score = 130 bits (326), Expect = 9e-28, Method: Composition-based stats.
Identities = 96/312 (30%), Positives = 156/312 (50%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F ELM+ +G ++ K +E + Q LI
Sbjct: 547 QHGCRYLQKKLEEGLPDHRDMIFRETFNHFHELMTDPFGNYLCQKLLEFATDEQRNLICE 606
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 607 SVA---QELVNISLNMHGTRAVQKMIDFLSTRRQI-HSIILALSLHVVALIKDLNGNHVI 662
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ +R Q+++ I+ NA
Sbjct: 663 QKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRIQLVNEITYNAL 722
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L D DA+ +G+ LS+ K S V++K ++ +
Sbjct: 723 TLVQDPYGNYVVQYILDLNDSRFSDAVIRQFQGNVCALSVQKFSSNVIEKCVRVAEHSTR 782
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
+++ELLN ++ ++ D YGNY +QTAL D QR LV ++ L +R
Sbjct: 783 KLLIDELLNRSRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIRPVLPLIRN 836
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 837 TPYG--KRIQNK 846
>gi|402218782|gb|EJT98857.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 514
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/319 (30%), Positives = 158/319 (49%), Gaps = 20/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G +LM+ +G ++ K +E N+ Q LI
Sbjct: 47 QHGCRYLQKKLEEGIPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEFANDEQRNLICE 106
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI---------KVVAQSPPLLYHVMSALKRLFKFLM 111
+ + S++ G+ +V+K+I +V S ++ ++ AL L+
Sbjct: 107 SVALD---LVGISLNMHGTRAVQKMIDYLSTPRQARVSCSSILQIHAIIIALSMNVVTLI 163
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
G+ VI KCL N FIY A HC+ +A H GC L ID+ ++R Q+
Sbjct: 164 KDLNGNHVIQKCLNRLAPEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASEAQRMQL 223
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ I+ NA +L + GNYVVQ++L+L D DA+ G+ + LS+ K S V++K
Sbjct: 224 VNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFVGNVIPLSMQKFSSNVIEKC 283
Query: 232 LKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ + +VEE L+ ++ ++ D +GNY +QTAL RLS LV ++
Sbjct: 284 IRVAEPSTRKLLVEEFLSRAKLEKLLRDSFGNYCVQTALDYADPAQRLS----LVEGIRP 339
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 340 ILPLIRNTPYG--KRIQSK 356
>gi|353234716|emb|CCA66738.1| related to Drosophila pumilio protein and Mpt5p protein
[Piriformospora indica DSM 11827]
Length = 980
Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/319 (31%), Positives = 156/319 (48%), Gaps = 30/319 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL G D +F ELM+ +G ++ K +E + Q LI
Sbjct: 533 QHGCRFLQKKLEEGVPEHRDIIFRETFKHFAELMTDPFGNYLCQKLLEYSTDEQRNLICE 592
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI-------KVVAQSPPLLYHVMSALKRLFKFLMMT 113
+ + S++ G+ +V+K+I ++VA L HV++ +K L
Sbjct: 593 SVAGD---LVTISLNMHGTRAVQKMIDFLSTQRQIVAIIRALSLHVVTLIKDL------- 642
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A HC+ +A H GC L ID+ ++R Q++
Sbjct: 643 -NGNHVIQKCLNRLVPEDNQFIYNAVATHCVEVATHRHGCCVLQRCIDHASETQRLQLVT 701
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ +A +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 702 EITYHALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFFGNVCALSVQKFSSNVIEKCIR 761
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
N ++EELLN ++ ++ D +GNY +QTAL D QR LV ++
Sbjct: 762 VAEHNTRKLLIEELLNRSRLEKLLRDSFGNYCVQTAL------DYAEPGQRMLLVEGIRP 815
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 816 ILPLIRNTPYG--KRIQSK 832
>gi|219887147|gb|ACL53948.1| unknown [Zea mays]
gi|413916364|gb|AFW56296.1| hypothetical protein ZEAMMB73_526143 [Zea mays]
Length = 685
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 149/302 (49%), Gaps = 6/302 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G K+F V ELM +G ++ K E CN++Q I+
Sbjct: 374 QNGCRFLQRIFIEGSREDARKVFDGVIEHIDELMVDPFGNYLIQKIFEKCNDNQKMHILY 433
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT + + + G+ V+K+I+ ++ S + V+SAL LMM G V
Sbjct: 434 EITKIPGQLIEVACNMHGTRVVQKVIESISTSDEVSM-VVSALSHGAITLMMDSNGCHVA 492
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL F+ AA ++C+ LA QGC + I + +R ++L+ I+ A
Sbjct: 493 ERCLLKLSPEGKAFLVNAATKYCVELAKDRQGCCIIQKCIAHASKEQRNRLLYSITTRAL 552
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L+ GNYV+Q VL L + + + L G Y LS KC S VV+K L+ +
Sbjct: 553 ELAEDEYGNYVIQFVLGLGVAWATNEVLDKLEGSYGYLSTQKCSSNVVEKCLREAPERER 612
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL++ ++L V DKYGNYVIQTAL E+ + +V L+ ++ H ALR
Sbjct: 613 ARIILELIHDPRLLNVLVDKYGNYVIQTALRES---EGTAVEAALIRAIKPHAGALRNNM 669
Query: 299 YG 300
YG
Sbjct: 670 YG 671
>gi|356512063|ref|XP_003524740.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 451
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 152/301 (50%), Gaps = 7/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+ G + +F + ELM +G ++ K ++ CNE Q I+L
Sbjct: 144 QHGCRFLQKMFDEGTPEDVLMIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQILL 203
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S++ G+ V+KL++ + + V SAL+ F L+ G+ V+
Sbjct: 204 IITEEPGQLVRISLNTHGTRVVQKLVETLKTRQQISLAV-SALEPGFLALIKDLNGNHVV 262
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL N N FI+ AA ++C+ +A H+ GC L I + G R++++ I NA
Sbjct: 263 QRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSSGEYREKLIAEICANAL 322
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ + GNYVVQ +L+L+ + I G+YV LS K GS VV+K L N +
Sbjct: 323 LLAQDQFGNYVVQFILDLKISSVTTCIRLQFEGNYVHLSRQKFGSHVVEKCLAAFNDENR 382
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ ELL++ + D + NYV+Q+AL R +H LV ++ H A R
Sbjct: 383 SRVILELLSTPHFEHLLQDPHANYVVQSAL----RHSEGHLHNLLVEAIESHKAVSRNSP 438
Query: 299 Y 299
Y
Sbjct: 439 Y 439
>gi|347835278|emb|CCD49850.1| similar to RNA-binding protein [Botryotinia fuckeliana]
Length = 794
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 384 QHGCRYLQKKLEDRNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDEERTVLIE 443
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ + + ++ AL+ L+ G+ VI
Sbjct: 444 NASHD---LVRIALNQHGTRALQKMIEFISTAG-QVQTIIGALRYRVVELIQDLNGNHVI 499
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 500 QKCLNKLSPTDAQFIFDAVGQHCVDVGTHRHGCCVLQRCIDHASGDQKAWLIRQISNNAY 559
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L +P + + G LS K S V++K L+ + +
Sbjct: 560 VLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVAQLSKQKFSSNVIEKCLRCAQEPSK 619
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L Q+ + D + NYVIQTAL L++ RL+ ++ HL A+R
Sbjct: 620 DMLIEEMLQPTQLDGLLRDSFANYVIQTALDYA----NLNMKTRLIEAIRPHLPAIRTTP 675
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 676 YG--RRIQAK 683
>gi|303282033|ref|XP_003060308.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457779|gb|EEH55077.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 333
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 157/305 (51%), Gaps = 11/305 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K ++K + + +LM +G ++ K +E CN+ Q I+
Sbjct: 22 QHGCRFLQRKFDDEGEDAVNKCYDEIIAEVVDLMMDPFGNYLVQKLLECCNDEQRTGILK 81
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+L +A ++ G+ +V+KL++ + ++P + ALK L+ G+ VI
Sbjct: 82 AGDGVPELVSVA-LNTHGTRAVQKLVETL-RTPEHIRLATEALKPGVVTLIKDLNGNHVI 139
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N F+Y AA + +A H GC L +D+ S+R+ +++ I+ A
Sbjct: 140 QRCLQRLEAEDNQFVYDAAKACSVEIATHRHGCCVLQRCVDHAADSQRRALVNEIAAQAL 199
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-----YQ 235
LS+ GNYVVQ++L+L P+ + L G Y +LS+ K S VV+K LK +
Sbjct: 200 VLSQDPFGNYVVQYILDLGLPWANAEVMVRLGGAYAELSMQKFSSNVVEKCLKLAGQELE 259
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ +V E+++S + ++ D YGNYV+Q+ L T + S+H LV +++ HL ++
Sbjct: 260 EHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLTVT----KGSLHAELVERIRPHLPLIK 315
Query: 296 VMKYG 300
+G
Sbjct: 316 NSPFG 320
>gi|405119110|gb|AFR93883.1| pumilio-family RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 981
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL GD + D +F G ELM+ +G ++ K +E E Q + II
Sbjct: 458 QHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIID 517
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ--SPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + S++ G+ +V+K++ +AQ P + ++ AL L+ G+
Sbjct: 518 SVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNH 574
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A + + +A H GC L ID+ ++R Q++ I N
Sbjct: 575 VIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFN 634
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYV+Q++L+L D + + G+ LS+ K S VV+K ++ +
Sbjct: 635 SLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPE 694
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
+V E+LN ++ ++ D YGNYVIQT L D + QR LV ++ L ++
Sbjct: 695 IRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVECIRPILPSI 748
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 749 RNTPYG--KRIQSK 760
>gi|321254126|ref|XP_003192973.1| RNA-binding protein of the pumilio family [Cryptococcus gattii
WM276]
gi|317459442|gb|ADV21186.1| RNA-binding protein of the pumilio family, putative [Cryptococcus
gattii WM276]
Length = 950
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL GD + D +F G ELM+ +G ++ K +E E Q + II
Sbjct: 459 QHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIID 518
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ--SPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + S++ G+ +V+K++ +AQ P + ++ AL L+ G+
Sbjct: 519 SVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNH 575
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A + + +A H GC L ID+ ++R Q++ I N
Sbjct: 576 VIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFN 635
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYV+Q++L+L D + + G+ LS+ K S VV+K ++ +
Sbjct: 636 SLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPE 695
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
+V E+LN ++ ++ D YGNYVIQT L D + QR LV ++ L ++
Sbjct: 696 IRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVECIRPILPSI 749
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 750 RNTPYG--KRIQSK 761
>gi|58265692|ref|XP_570002.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134109369|ref|XP_776799.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259479|gb|EAL22152.1| hypothetical protein CNBC2900 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226234|gb|AAW42695.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 948
Score = 129 bits (323), Expect = 2e-27, Method: Composition-based stats.
Identities = 97/314 (30%), Positives = 156/314 (49%), Gaps = 17/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL GD + D +F G ELM+ +G ++ K +E E Q + II
Sbjct: 458 QHGCRYLQKKLEDGDPKHRDMIFNETYGHFPELMTDPFGNYLCQKLLEYSTEEQRSAIID 517
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ--SPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + S++ G+ +V+K++ +AQ P + ++ AL L+ G+
Sbjct: 518 SVAND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLILALSMNVVALIKDLNGNH 574
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A + + +A H GC L ID+ ++R Q++ I N
Sbjct: 575 VIQKCLNKLIPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTEIIFN 634
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYV+Q++L+L D + + G+ LS+ K S VV+K ++ +
Sbjct: 635 SLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRVADPE 694
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
+V E+LN ++ ++ D YGNYVIQT L D + QR LV ++ L ++
Sbjct: 695 IRKVLVGEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVECIRPILPSI 748
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 749 RNTPYG--KRIQSK 760
>gi|15219849|ref|NP_173643.1| protein pumilio 8 [Arabidopsis thaliana]
gi|313471411|sp|Q9LM20.2|PUM8_ARATH RecName: Full=Putative pumilio homolog 8, chloroplastic;
Short=APUM-8; Short=AtPUM8; Flags: Precursor
gi|332192094|gb|AEE30215.1| protein pumilio 8 [Arabidopsis thaliana]
Length = 515
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + +F V ELM +G ++ K ++ CNE Q IIL
Sbjct: 210 QHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIIL 269
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ +G+ V++L++ + ++ + V SAL+ F L+ G+ VI
Sbjct: 270 MVTSEPGQLIRISLNAYGTRVVQRLVESI-KTRKQISLVKSALRPGFLNLIRDLNGNHVI 328
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N+FI++ A + C+ +A H GC L I G +R++++ IS N+
Sbjct: 329 QRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSL 388
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++ L + +
Sbjct: 389 FLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRP 448
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL++ + D Y N+VIQ AL T + S+H LV ++ H + LR Y
Sbjct: 449 QIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH-SILRNNPY 503
>gi|9454526|gb|AAF87849.1|AC073942_3 Contains similarity to RNA binding protein PufA from Dictyostelium
discoideum gi|5106561 and contains multiple
Pumilio-family RNA binding PF|00806 domains [Arabidopsis
thaliana]
Length = 514
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 156/300 (52%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + +F V ELM +G ++ K ++ CNE Q IIL
Sbjct: 209 QHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIIL 268
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ +G+ V++L++ + ++ + V SAL+ F L+ G+ VI
Sbjct: 269 MVTSEPGQLIRISLNAYGTRVVQRLVESI-KTRKQISLVKSALRPGFLNLIRDLNGNHVI 327
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N+FI++ A + C+ +A H GC L I G +R++++ IS N+
Sbjct: 328 QRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSL 387
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++ L + +
Sbjct: 388 FLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRP 447
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL++ + D Y N+VIQ AL T + S+H LV ++ H + LR Y
Sbjct: 448 QIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH-SILRNNPY 502
>gi|443895829|dbj|GAC73174.1| translational repressor MPT5/PUF4 and related RNA-binding proteins
[Pseudozyma antarctica T-34]
Length = 671
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL + D +F ELM+ +G ++ K +E C + Q LI+
Sbjct: 241 QHGCRFLQKKLEESNGAHRDMIFSETFSHFAELMTDPFGNYLCQKMLEYCTDEQRNLIVE 300
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + S++ G+ +V+K+I ++ +P ++ ++ AL L+ G+ V+
Sbjct: 301 LVAPE---LVTISLNMHGTRAVQKMIDFLS-TPRQIHSIIVALSMNVVTLIKDLNGNHVV 356
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A HC+ +A H GC L ID+ S+R Q++ I+ NA
Sbjct: 357 QKCLNRLGAEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASESQRVQLVAEITYNAL 416
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
+L + GNYVVQ+VL+L DA+ G+ LS+ K S V++K ++
Sbjct: 417 TLVQDPFGNYVVQYVLDLSIARFTDAVVRQFVGNVCLLSVQKFSSNVMEKCIRVSEPGVR 476
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELLN ++ ++ D Y NYV+QT+L R+ RLV ++ L +R
Sbjct: 477 KQLIEELLNRARLEKLLRDSYANYVVQTSLDYADPVQRM----RLVECIRPILPVIRNTP 532
Query: 299 YGSNKEIQKK 308
YG K IQ K
Sbjct: 533 YG--KRIQSK 540
>gi|346323846|gb|EGX93444.1| RNA-binding protein, putative [Cordyceps militaris CM01]
Length = 1060
Score = 128 bits (321), Expect = 4e-27, Method: Composition-based stats.
Identities = 87/310 (28%), Positives = 163/310 (52%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + +++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 645 QHGCRYLQKKLEERNPEQVHMIWFETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 704
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V +P ++ ++ AL+ L+ G+ VI
Sbjct: 705 NAS-QDMVRI--ALNQHGTRALQKMIEYV-NTPQQVHLIIEALRFRVVELIQDLNGNHVI 760
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A +C+ + H GC L ID+ G +++ ++ I+ +A
Sbjct: 761 QKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVARITAHAR 820
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
L + GNYVVQ++++L +P + + +G LS K S V++K L+ +
Sbjct: 821 ILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLRCAQPPSR 880
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEE+L + +I ++ D + NYVIQTAL Q + RLV ++ L +R
Sbjct: 881 DMIVEEMLAAPEIERLLRDSFANYVIQTALEFATPQ----LKYRLVEAIRPVLPQIRTTP 936
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 937 YG--RRIQAK 944
>gi|449550572|gb|EMD41536.1| hypothetical protein CERSUDRAFT_110088 [Ceriporiopsis subvermispora
B]
Length = 1043
Score = 127 bits (320), Expect = 5e-27, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 158/319 (49%), Gaps = 22/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F +LM+ +G ++ K +E + Q +I
Sbjct: 589 QHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDEQRNVICE 648
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA---QSPP----LLYHVMSALKRLFKFLMMT 113
+ Q + S++ G+ +V+K+I ++ Q+ P ++ ++ AL L+
Sbjct: 649 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQADPKYNAQIHSIILALSLHVVVLIKD 705
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A +C+ +A H GC L ID+ ++R Q+++
Sbjct: 706 LNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDAQRVQLVN 765
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 766 EITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVR 825
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
+ ++ ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 826 VAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPSQRALLVEGIRP 879
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 880 VLPLIRNTPYG--KRIQNK 896
>gi|384252508|gb|EIE25984.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 380
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 153/305 (50%), Gaps = 11/305 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ K G + + V ELM +G ++ K ++ C+E Q L +L
Sbjct: 71 QNGCRFLQRKFDEGGPAAIQAVLPEVLEHLIELMMDPFGNYLIQKLLDRCSEDQ-RLAVL 129
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K + + + +++ G+ +V+KLI+ + S + V AL+ L+ G+ VI
Sbjct: 130 KKAAERKELVQVALNTHGTRAVQKLIETLT-SREQVALVTDALRGGVVSLIRDLNGNHVI 188
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + F+Y AA H + +A H GC L ID ++++++ I+ +A
Sbjct: 189 QRCLQRLGPEDSQFVYDAAAAHTMDIATHRHGCCVLQRCIDFATPPQKRRLVDQITSHAL 248
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
LS+ GNYVVQ+VL L ++I L GHY +L+ K S VV+K LK
Sbjct: 249 PLSQDPFGNYVVQYVLELGHSEATESIMRQLCGHYPELAQQKFSSNVVEKCLKLGGQSLA 308
Query: 239 ---HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ ELLNS + ++ D Y NYV+Q+AL + Q +H LV ++ +L +LR
Sbjct: 309 EMRERVIRELLNSPLMPRLLQDPYANYVLQSALSVSSAQ----LHNDLVDAMRPYLPSLR 364
Query: 296 VMKYG 300
+G
Sbjct: 365 GTPHG 369
>gi|357120480|ref|XP_003561955.1| PREDICTED: uncharacterized protein LOC100842718 [Brachypodium
distachyon]
Length = 685
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 8/298 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + D +F + ELM+ + ++ K ++ C+E Q II
Sbjct: 380 QNGCRFLQQKFEEGKQHV-DAIFEGIINHIAELMTNSFANYLVQKLLDVCDEEQRLRIIA 438
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T L S++ G+ +V+KLI+ V ++ ++SA++ F L+ G+ VI
Sbjct: 439 VLTEDPVKLLRISLNTHGTRAVQKLIETVKIRKQIVL-IISAIQPGFMHLVNDLNGNHVI 497
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL +N FI++AA HC +A H GC L I + +G + +++ + +A
Sbjct: 498 QKCLTNFGVEENKFIFEAAAAHCFEMAIHRHGCCVLQKCITSARGEYQAKLIVEVCAHAF 557
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L++ GNYVVQ+VL+ + P + G+YV LS K S VV+K LK
Sbjct: 558 QLAQDPFGNYVVQYVLDQKIPSANAHLAAQFEGNYVYLSKQKVSSNVVEKCLKVFSDEDK 617
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
IV +L++ Q+ D + NYVI TALV + R +H LV ++ H ALR
Sbjct: 618 AAIVFDLISVTHFEQLLQDPFANYVIHTALVNS----RGHLHNALVEAIRPHEEALRT 671
>gi|328768244|gb|EGF78291.1| hypothetical protein BATDEDRAFT_37298 [Batrachochytrium
dendrobatidis JAM81]
Length = 636
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 20/314 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + LD ++ + ELM+ +G ++ K +E C E Q +++
Sbjct: 265 QHGCRYLQRKLEEQNEKHLDMIYVEIFPNFAELMTDPFGNYLCQKLLEYCTEEQRNMLVE 324
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKF----LMMTKPG 116
+ S++ G+ +V+KLI+ ++ +H +S + R L+ G
Sbjct: 325 HVAPD---LAAVSLNMHGTRAVQKLIEFLS-----THHQISTVVRALALNVVSLIKDLNG 376
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ VI KCL + N FIY A +HC +A H GC L ID+ S+R Q++ I+
Sbjct: 377 NHVIQKCLNRLSHENNQFIYNAVRKHCTEIATHRHGCCVLQRCIDHASDSQRVQLVAEIT 436
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+A +L + GNYVVQ+VL+L + +AI G+ LS+ K S V++K ++ +
Sbjct: 437 YHALTLVQDPFGNYVVQYVLDLAEIKFSEAIVHRFLGNICLLSVQKFSSNVIEKCIRVAS 496
Query: 237 AV--HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+ +++ELLN +++ ++ D Y NYV+QT+L RL +LV ++ L ++
Sbjct: 497 SETRALLIDELLNKERLDKLLRDSYANYVVQTSLDYAEPAQRL----QLVECIRPILPSI 552
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 553 RNTPYG--KRIQTK 564
>gi|159130481|gb|EDP55594.1| RNA-binding protein, putative [Aspergillus fumigatus A1163]
Length = 1062
Score = 127 bits (319), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 156/302 (51%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F + ELM+ +G ++ K +E N+ Q +I
Sbjct: 657 QHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 716
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+QL +A +++ G+ +++K+I+ ++ +P + V+ AL+ L+ G+ VI
Sbjct: 717 NAA--NQLVKIA-LNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQDLNGNHVI 772
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 773 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAF 832
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+L + GNYVVQ++L+L +P + +C A RG+ LS K S V++K L+
Sbjct: 833 ALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMR 892
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 893 RQMIDEMLAGTELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPILPSIRQTP 948
Query: 299 YG 300
+G
Sbjct: 949 HG 950
>gi|70990304|ref|XP_750001.1| RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847633|gb|EAL87963.1| RNA-binding protein, putative [Aspergillus fumigatus Af293]
Length = 1062
Score = 127 bits (319), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 156/302 (51%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F + ELM+ +G ++ K +E N+ Q +I
Sbjct: 657 QHGCRYLQRKLEERNPEHVQLIFDETNMHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 716
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+QL +A +++ G+ +++K+I+ ++ +P + V+ AL+ L+ G+ VI
Sbjct: 717 NAA--NQLVKIA-LNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQDLNGNHVI 772
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 773 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAF 832
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+L + GNYVVQ++L+L +P + +C A RG+ LS K S V++K L+
Sbjct: 833 ALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMR 892
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 893 RQMIDEMLAGTELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPILPSIRQTP 948
Query: 299 YG 300
+G
Sbjct: 949 HG 950
>gi|261194503|ref|XP_002623656.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239588194|gb|EEQ70837.1| RNA-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 1119
Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 701 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNA 760
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 761 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 816
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 817 CLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTL 876
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 877 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSS 936
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+VEE+L ++ ++ D + NYV+QTA+ + R +L+ ++ L A+R +G
Sbjct: 937 LVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPILPAIRQTPHG 992
>gi|242071465|ref|XP_002451009.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
gi|241936852|gb|EES09997.1| hypothetical protein SORBIDRAFT_05g022550 [Sorghum bicolor]
Length = 734
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 146/301 (48%), Gaps = 6/301 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++ ++LQ+ L+ G +DK+F + ELM ++ K +E C Q +I
Sbjct: 420 QDACRFLQKVLTEGTQEDIDKIFSEIIENVGELMVDPTAHYLVQKILEVCTNDQRTYLIR 479
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT AS + G+ V+K+I+ + S + V+S L LM G+ V
Sbjct: 480 EITKAPISLHKASCNMHGTRVVQKVIETMNTSDQVSM-VVSTLNTGIMRLMTDSYGNHVA 538
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
L CLE F+ + A L LA GC L I+N +R +L I+ +A
Sbjct: 539 LHCLEKLLPEHKAFLLETATSRYLQLARDRHGCCVLQKCIENSSDEQRNNLLCKITSSAL 598
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-H 239
LS + GNYV+Q +L L + I L GH+ +LS+ KCGS VV+ LK +
Sbjct: 599 VLSEDQYGNYVIQFILTLNIEWATTRIVDELAGHFGNLSMQKCGSHVVEHCLKLPRPICD 658
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
I+ EL++ ++L + D+YGN+VIQTAL +Q + H V ++ H A L+ Y
Sbjct: 659 RIINELMHDPKLLHIILDQYGNFVIQTAL----KQCQGEQHAAFVETIRPHTAVLQSNMY 714
Query: 300 G 300
G
Sbjct: 715 G 715
>gi|327357037|gb|EGE85894.1| RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1043
Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 625 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNA 684
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 685 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 740
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 741 CLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTL 800
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 801 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSA 860
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+VEE+L ++ ++ D + NYV+QTA+ + R +L+ ++ L A+R +G
Sbjct: 861 LVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPILPAIRQTPHG 916
>gi|239613522|gb|EEQ90509.1| RNA-binding protein [Ajellomyces dermatitidis ER-3]
Length = 1122
Score = 127 bits (318), Expect = 7e-27, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 704 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNA 763
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 764 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 819
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 820 CLNRLSAPDAQFIYDAVGTSCVAVGTHRHGCCVLQRCIDHASGEQRARLIEQITNNAFTL 879
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 880 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSA 939
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+VEE+L ++ ++ D + NYV+QTA+ + R +L+ ++ L A+R +G
Sbjct: 940 LVEEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLIEAIRPILPAIRQTPHG 995
>gi|67516077|ref|XP_657924.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
gi|40746570|gb|EAA65726.1| hypothetical protein AN0320.2 [Aspergillus nidulans FGSC A4]
Length = 1515
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/302 (28%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + L +F ELM+ +G ++ K +E N+ Q +++
Sbjct: 600 QHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSNDEQRTVLVN 659
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K Q + ++++ G+ +++K+I+ ++ + V+ ALK L+ G+ VI
Sbjct: 660 KAAPQ---LVKIALNQHGTRALQKMIEFIS-TEEQTQTVIDALKDHVVELVQDLNGNHVI 715
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL K+ FIY A C+ + H GC L ID+ G++R +++ I+ NA
Sbjct: 716 QKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQITENAF 775
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L + + +C LS K S V++K L+ +
Sbjct: 776 ALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKCLRTADEEMR 835
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L D++ ++ D Y NYV+QTA M + R+V ++ L +LR
Sbjct: 836 RQMIEEMLAGDELEKMLRDSYANYVVQTA----MDYADPATRARIVKYIEPILPSLRGTP 891
Query: 299 YG 300
+G
Sbjct: 892 HG 893
>gi|302412761|ref|XP_003004213.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261356789|gb|EEY19217.1| pumilio domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 1157
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 776 QHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERTVLIQ 835
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
QD + + ++++ G+ +++K+I+ V S + ++ AL+ L+ G+ VI
Sbjct: 836 NAA-QDMVRI--ALNQHGTRALQKMIEFVTTSIQV-QMIIDALRYRVVELIQDLNGNHVI 891
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A HC+ + H GC L ID+ G+++ ++ I+ +A
Sbjct: 892 QKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCIDHADGAQKVWLIGKITEHAP 951
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + GNYVVQ++++L +P + + R LS K S V++K L+ A
Sbjct: 952 VLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRHKFSSNVIEKLLRCSQAQGR 1011
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV+ELL ++ ++ D Y NYVIQTAL + + R+V ++ L A+R
Sbjct: 1012 DMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEGK----HRMVEVIRPFLPAVRSTP 1067
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 1068 YG--RRIQAK 1075
>gi|119497273|ref|XP_001265396.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
gi|119413558|gb|EAW23499.1| RNA-binding protein, putative [Neosartorya fischeri NRRL 181]
Length = 1056
Score = 126 bits (317), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 154/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F + ELM+ +G ++ K +E N+ Q +I
Sbjct: 651 QHGCRYLQRKLEERNPEHVQFIFDETNMHVVELMTDPFGNYLCQKLLEYSNDEQRTALIN 710
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P + V+ AL+ L+ G+ VI
Sbjct: 711 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQIQTVIQALRDHVVELVQDLNGNHVI 766
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 767 QKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITANAF 826
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+L + GNYVVQ++L+L +P + +C A RG+ LS K S V++K L+
Sbjct: 827 ALVQDPFGNYVVQYILDLAEPHFTEPLCQAFRGNIPALSKQKFSSNVIEKCLRTAEFQMR 886
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 887 RQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADPETR----ARIVDAIRPILPSIRQTP 942
Query: 299 YG 300
+G
Sbjct: 943 HG 944
>gi|212537853|ref|XP_002149082.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
gi|210068824|gb|EEA22915.1| RNA-binding protein, putative [Talaromyces marneffei ATCC 18224]
Length = 1026
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 86/305 (28%), Positives = 153/305 (50%), Gaps = 16/305 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL ++ + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 621 QHGCRYLQRKLEERNADHVQMIFEETHMHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIH 680
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ V+ +P + V+ AL+ L+ G+ VI
Sbjct: 681 NAAPQ---LVPIALNQHGTRALQKMIEFVS-TPQQIRMVIDALRGHVVDLVQDLNGNHVI 736
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A HC+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 737 QKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 796
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
SL + GNYVVQ++L+L +P D +C + G+ LS K S V++K L+ Y
Sbjct: 797 SLVQDPFGNYVVQYILDLSEPHFTDPLCQSFLGNIPALSKQKFSSNVIEKCLR---TAEY 853
Query: 241 -----IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+++E+L ++ + D Y NYV+QTA+ +R R++ ++ L ++R
Sbjct: 854 PMRCRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAVRPILPSIR 909
Query: 296 VMKYG 300
+G
Sbjct: 910 QTPHG 914
>gi|391870982|gb|EIT80151.1| RNA-binding protein, putative [Aspergillus oryzae 3.042]
Length = 992
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 598 QHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALIN 657
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 658 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQDLNGNHVI 713
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 714 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 773
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 774 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADGPVR 833
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++ L ++R
Sbjct: 834 GQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETR----TRLIDAIRPILPSIRQTP 889
Query: 299 YG 300
+G
Sbjct: 890 HG 891
>gi|317141237|ref|XP_001817859.2| RNA-binding protein [Aspergillus oryzae RIB40]
Length = 992
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 83/302 (27%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 598 QHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALIN 657
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 658 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQDLNGNHVI 713
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 714 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 773
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 774 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADGPVR 833
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++ L ++R
Sbjct: 834 GQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETR----TRLIDAIRPILPSIRQTP 889
Query: 299 YG 300
+G
Sbjct: 890 HG 891
>gi|389742126|gb|EIM83313.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 1029
Score = 126 bits (316), Expect = 1e-26, Method: Composition-based stats.
Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G +LM+ +G ++ K +E + Q +I
Sbjct: 580 QHGCRYLQKKLEEGVPDHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDEQRNIICE 639
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYH-----VMSALKRLFKFLMMT 113
+ + S++ G+ +V+K+I ++ + YH ++ AL L+
Sbjct: 640 SVATD---LVNISLNMHGTRAVQKMIDFLSTRRQTDHRYHGQIHSIIVALSLHVVVLIKD 696
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++
Sbjct: 697 LNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRIQLVN 756
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 757 EITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCIR 816
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
+++ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 817 VAEHGTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVDGIRP 870
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 871 VLPLIRNTPYG--KRIQNK 887
>gi|361131374|gb|EHL03072.1| putative Pumilio domain-containing protein C6G9.14 [Glarea
lozoyensis 74030]
Length = 626
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 159/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 214 QHGCRYLQKKLEDRNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDEERTVLIE 273
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ + ++ +LK L+ G+ VI
Sbjct: 274 NASHD---LVRIALNQHGTRALQKMIEFISTET-QINIIIRSLKNRVVELIQDLNGNHVI 329
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ FI+ A HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 330 QKCLNRLTAQQSQFIFDAVGIHCIDVGTHRHGCCVLQRCIDHASGDQKSWLIRQISNNAY 389
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L +P + + +G LS K S V++K L+ + +
Sbjct: 390 VLVQDPFGNYVVQYILDLNEPIFTEPLVAMFQGRVGQLSKQKFSSNVIEKCLRCAKEPSK 449
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L ++ ++ D + NYVIQTAL ++ RL+ ++ HL A+R
Sbjct: 450 DMLIEEMLQPTELDRLLRDSFANYVIQTALDYA----NPAMKTRLIEAIRPHLPAIRTTP 505
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 506 YG--RRIQAK 513
>gi|328853049|gb|EGG02190.1| hypothetical protein MELLADRAFT_24024 [Melampsora larici-populina
98AG31]
Length = 325
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL G+ D +F + ELM+ +G ++ K +E + Q L+I
Sbjct: 24 QHGCRFLQKKLEEGEPTHRDMIFAEIYPHFGELMTDAFGNYLSQKLLEYSTDEQRDLLIE 83
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I+ + + S++ G+ +V+K+I ++ + + ++ AL L+ G+ VI
Sbjct: 84 SISGE---LVSISLNMHGTRAVQKMIDFLS-TQRQVQSLIIALNLNVVTLIKDLNGNHVI 139
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ S+R Q++ I+ N+
Sbjct: 140 QKCLNHLPPEDNQFIYNAVAANCIEVATHRHGCCVLQRCIDHASESQRIQLVTEITYNSL 199
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
SL + GNYVVQ+VL+L D I+AI G+ LS+ K S VV+K ++ +
Sbjct: 200 SLVQDPFGNYVVQYVLDLNDSRFIEAIVRQFLGNVCALSMQKFSSNVVEKCIRVSDPAGR 259
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+VEEL ++ ++ D + NYV+QTAL + R +LV ++ L +R
Sbjct: 260 RALVEELSGRQRLERLLRDSFANYVVQTALDYSDPAQR----AQLVDNIRPILPMIRNTP 315
Query: 299 YGSNKEIQKK 308
YG K IQ K
Sbjct: 316 YG--KRIQSK 323
>gi|115486015|ref|NP_001068151.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|77551702|gb|ABA94499.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113645373|dbj|BAF28514.1| Os11g0579900 [Oryza sativa Japonica Group]
gi|125577613|gb|EAZ18835.1| hypothetical protein OsJ_34373 [Oryza sativa Japonica Group]
gi|215717155|dbj|BAG95518.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 746
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 148/297 (49%), Gaps = 7/297 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+ + G +K+ + ELM +G ++ K +E C++ Q II
Sbjct: 431 QNGCRFLQKVFTEGTKEDFEKILAEIIDHFGELMIDPFGNYLVQKLLEECSDDQRTRIIC 490
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT + + + G+ +V+K+I + +P + V+SAL LM GS V
Sbjct: 491 EITRVPGELITVACNMHGTRTVQKVIDTI-NTPEQISKVVSALSPGAMRLMTDTNGSHVA 549
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ F+ A L LA + GC + I++ ++ +L I+ +A
Sbjct: 550 QRCLKKLLPEYKAFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSSAL 609
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
SLS + GNYV+Q V+NL + I L+GH+ LS+ KCGS VV+ LK + +
Sbjct: 610 SLSEDQYGNYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDR 669
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
I+ EL+ ++ + +D +GN+VIQTAL E + +H V ++ H AL+
Sbjct: 670 EMIIHELMADSKLPHIMADPFGNFVIQTALKEC----KGELHSSFVEAIRPHAPALQ 722
>gi|297845242|ref|XP_002890502.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
gi|297336344|gb|EFH66761.1| hypothetical protein ARALYDRAFT_335467 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 151/291 (51%), Gaps = 6/291 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + +F V ELM +G ++ K ++ CNE Q IIL
Sbjct: 220 QHGCRFLQRIFEDGSALDAMVIFNEVIPHVVELMMDPFGNYLMQKLLDVCNEEQRTQIIL 279
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ +G+ V++L++ + ++ + V AL+ F L+ G+ VI
Sbjct: 280 MVTSEPGQLIRISLNAYGTRVVQRLVESI-KTRKQISLVKLALRPGFLNLIRDLNGNHVI 338
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N+FI++ A + C+ +A H GC L I G +R++++ IS N+
Sbjct: 339 QRCLKCLSTKDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSL 398
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ VL L D I A+ L+GHYV+LS+ K S +V++ L + +
Sbjct: 399 FLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRP 458
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
IV EL++ + D Y N+VIQ AL T + S+H LV ++ H
Sbjct: 459 QIVRELISVPHFDILIQDPYANFVIQAALAVT----KGSLHATLVEVIRPH 505
>gi|154277036|ref|XP_001539363.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414436|gb|EDN09801.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1175
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 85/300 (28%), Positives = 155/300 (51%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 756 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTALINNA 815
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 816 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 871
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 872 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 931
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 932 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNISALSKQKFSSNVIEKCIRTADPQSRSA 991
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+V+E+L ++ ++ D + NYV+QTA+ + R +LV ++ L A+R +G
Sbjct: 992 LVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYR----TKLVEAIRPILPAIRQTPHG 1047
>gi|451846158|gb|EMD59469.1| hypothetical protein COCSADRAFT_259016 [Cochliobolus sativus
ND90Pr]
Length = 1004
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/302 (27%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL ++ + +F + ELM+ +G ++ K +E CN+ Q ++
Sbjct: 598 QHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDEQRNTLVR 657
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++ G+ +++K+I+ ++ ++ AL L+ G+ VI
Sbjct: 658 NAA---PAMVQIAFNQHGTRALQKMIEFISTDDQT-QMIIRALSGQVVDLIQDLNGNHVI 713
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A EHC+ + H GC L ID+ G ++ ++ I+ ++
Sbjct: 714 QKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDLIRKITAHSF 773
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
L + GNYVVQ++L+L D +C +G +LS K S V++K ++ +
Sbjct: 774 HLVQDPFGNYVVQYILDLNDTSFTTPMCQGFQGKICELSKQKFSSNVIEKCIRCAEPHVK 833
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELL+ +Q+ Q+ D YGNYVIQTAL L VH L+ ++ L ++R
Sbjct: 834 GMMIEELLDVEQLEQLMRDSYGNYVIQTAL--EFAPAELCVH--LIEAMRPILPSIRQTP 889
Query: 299 YG 300
YG
Sbjct: 890 YG 891
>gi|322710722|gb|EFZ02296.1| RNA-binding protein, putative [Metarhizium anisopliae ARSEF 23]
Length = 1023
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 163/312 (52%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 598 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 657
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 658 NAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQDLNGNHVI 713
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 714 QKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVGRITEHAR 773
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + GNYVVQ++++L +P + + +G LS K S V++K L+ A
Sbjct: 774 ILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLRCSQAPSK 833
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ--RLVTKLQQHLAALRV 296
IVEELL ++ ++ D + NYVIQTAL + + HQ RLV ++ L +R
Sbjct: 834 DMIVEELLAPQEMERLLRDSFANYVIQTAL------EFATPHQKYRLVESIRPILPQIRT 887
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 888 TPYG--RRIQAK 897
>gi|322696542|gb|EFY88333.1| RNA-binding protein, putative [Metarhizium acridum CQMa 102]
Length = 1012
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 89/312 (28%), Positives = 163/312 (52%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 588 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 647
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 648 NAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQDLNGNHVI 703
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 704 QKCLNKLTSLDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGEQKPWLVGRITEHAR 763
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + GNYVVQ++++L +P + + +G LS K S V++K L+ A
Sbjct: 764 ILVQDPFGNYVVQYIIDLNEPSFTEPMVAMFQGCISQLSRHKFSSNVIEKCLRCSQAPSK 823
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ--RLVTKLQQHLAALRV 296
IVEELL ++ ++ D + NYVIQTAL + + HQ RLV ++ L +R
Sbjct: 824 DMIVEELLAPQEMERLLRDSFANYVIQTAL------EFATPHQKYRLVESIRPILPQIRT 877
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 878 TPYG--RRIQAK 887
>gi|400597533|gb|EJP65263.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1043
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 87/310 (28%), Positives = 161/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 631 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 690
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V +P ++ ++ AL+ L+ G+ VI
Sbjct: 691 NAS-QDMVRI--ALNQHGTRALQKMIEYV-NTPQQVHLIIEALRFRVVELIQDLNGNHVI 746
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A +C+ + H GC L ID+ G +++ ++ I+ +A
Sbjct: 747 QKCLNKLTSLDAQFIFDAVGNNCIEVGTHRHGCCVLQRCIDHASGDQKQWLVARITAHAR 806
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
L + GNYVVQ++++L +P + + +G LS K S V++K L+ +
Sbjct: 807 ILVQDPFGNYVVQYIIDLNEPTFTEPVVATFQGCIGQLSRHKFSSNVIEKCLRCAQPPSK 866
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEE+L +I ++ D + NYVIQTAL Q + RLV ++ L +R
Sbjct: 867 DMIVEEMLVPAEIERLLRDSFANYVIQTALEFATPQ----LKYRLVEAIRPILPQIRTTP 922
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 923 YG--RRIQAK 930
>gi|325094905|gb|EGC48215.1| pumilio family RNA binding protein [Ajellomyces capsulatus H88]
Length = 651
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 254 GCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTALINNA 313
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
QL +A +++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 314 A--PQLVKIA-LNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 369
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A E C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 370 CLNRLSATDAQFIYDAVGESCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 429
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 430 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSA 489
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+V+E+L ++ ++ D + NYV+QTA+ + R +LV ++ L A+R +G
Sbjct: 490 LVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPILPAIRQTPHG 545
>gi|342879890|gb|EGU81123.1| hypothetical protein FOXB_08397 [Fusarium oxysporum Fo5176]
Length = 1061
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/312 (28%), Positives = 162/312 (51%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL ++ + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 618 QHGCRYLQKKLEERNADQVHIIWVETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 677
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 678 NAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHIIIEALRYRVVELIQDLNGNHVI 733
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 734 QKCLNKLTPPDAQFIFDAVGGSCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHAR 793
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
L + GNYVVQ++++L +P + I + LS K S V++K L+ +
Sbjct: 794 ILVQDPFGNYVVQYIIDLNEPLFTEPIVLTFKDCITQLSRHKFSSNVIEKCLRCAQPPSK 853
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ--RLVTKLQQHLAALRV 296
IVEELL + ++ ++ D + NYVIQTAL + + HQ RLV ++ L +R
Sbjct: 854 DLIVEELLRNQEMERLLRDSFANYVIQTAL------EYATPHQKHRLVEAIRPILPQIRT 907
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 908 TPYG--RRIQAK 917
>gi|295658885|ref|XP_002790002.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282085|gb|EEH37651.1| pumilio domain-containing protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1154
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 84/300 (28%), Positives = 152/300 (50%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 620 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNA 679
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI K
Sbjct: 680 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRGRVVELVQDLNGNHVIQK 735
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 736 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITKNAFTL 795
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ +
Sbjct: 796 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAA 855
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
++EE+L ++ ++ D + NYV+QTA+ R +L+ ++ L A+R +G
Sbjct: 856 LIEEMLVPSELEKMLRDSFANYVVQTAMDFADPDSR----NKLIDAIRPILPAIRQTPHG 911
>gi|297809067|ref|XP_002872417.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318254|gb|EFH48676.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 540
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 146/272 (53%), Gaps = 8/272 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKL--FWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G ++LQ+ + G+ R +D + F V EL +G + K +E CNE Q I++
Sbjct: 271 GCRFLQKFV--GEGRFVDVMIVFKEVINHIAELGIDPFGNYFIQKLLEVCNEEQRTQILI 328
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T + L + S++ +G+ V+KLI+ V + V SAL F L+ G+ VI
Sbjct: 329 RLTSKPGLLIKISINNYGTRVVQKLIETVTTKEQISL-VKSALVPGFLSLVRELNGNHVI 387
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
L CL+ + N FI +AA++ C +A H GC L + G + ++++ IS N+
Sbjct: 388 LNCLKFFGPNDNKFILEAAIKFCTEIATHRHGCCVLQRCVSYSVGEQHEKLVGEISRNSL 447
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-YQNAVH 239
L++ GNYVVQ++ +E + F LRG+YV L+ K GS VV+K ++ Y +
Sbjct: 448 LLAQDPYGNYVVQYI--IEKKVGGVNVMFELRGNYVKLATQKFGSHVVEKCIRFYPESRS 505
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVET 271
IV EL++ Q+ D Y NYVIQ+AL +T
Sbjct: 506 QIVHELVSVPNFEQLVQDPYANYVIQSALSKT 537
>gi|395326054|gb|EJF58468.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 978
Score = 125 bits (314), Expect = 3e-26, Method: Composition-based stats.
Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 21/318 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G +LM+ +G ++ K +E + Q +I
Sbjct: 536 QHGCRYLQKKLEEGVPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDEQRNVICE 595
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKRLFKFLMMTK 114
+ Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 596 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDLGDVQIHSIILALSLHVVVLIKDL 652
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++
Sbjct: 653 NGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRVQLVNE 712
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I+ NA +L + GNYVVQ++L+L D D + G+ LS+ K S V++K ++
Sbjct: 713 ITYNALTLVQDPYGNYVVQYILDLNDNRFSDGVIRQFAGNVCALSVQKFSSNVIEKCIRV 772
Query: 235 --QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
+ ++ ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 773 AEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPSQRALLVEGIRPV 826
Query: 291 LAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 827 LPLIRNTPYG--KRIQNK 842
>gi|302698595|ref|XP_003038976.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
gi|300112673|gb|EFJ04074.1| hypothetical protein SCHCODRAFT_65128 [Schizophyllum commune H4-8]
Length = 480
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 156/320 (48%), Gaps = 23/320 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F G +LM+ +G ++ K +E + Q +I
Sbjct: 44 QHGCRYLQKKLEEGLPEHRDMIFRETFGHFADLMTDPFGNYLCQKLLEYSTDEQRNIICE 103
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL--------LYHVMSALKRLFKFLMM 112
+ Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 104 SVA---QELVNISLNMHGTRAVQKMIDFLSTRRQTDGRYNNHQIHSIILALSMHVVVLIK 160
Query: 113 TKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q++
Sbjct: 161 DLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRIQLV 220
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K +
Sbjct: 221 NEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFAGNVCALSVQKFSSNVIEKCI 280
Query: 233 KY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQ 288
+ N +++ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 281 RVAEHNTRKMLIDELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIR 334
Query: 289 QHLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 335 PVLPLIRNTPYG--KRIQNK 352
>gi|242808102|ref|XP_002485093.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715718|gb|EED15140.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1029
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 594 QHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIH 653
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ V+ +P + V+ AL+ L+ G+ VI
Sbjct: 654 NAAPQ---LVPIALNQHGTRALQKMIEFVS-TPQQIQMVIDALRGHVVDLVQDLNGNHVI 709
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A HC+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 710 QKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 769
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
SL + GNYVVQ++L+L +P + +C + G+ LS K S V++K L+
Sbjct: 770 SLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLRTAEYPMR 829
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ + D Y NYV+QTA+ +R R++ ++ L ++R
Sbjct: 830 RRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAVRPILPSIRQTP 885
Query: 299 YG 300
+G
Sbjct: 886 HG 887
>gi|242808097|ref|XP_002485092.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218715717|gb|EED15139.1| RNA-binding protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 1001
Score = 125 bits (313), Expect = 3e-26, Method: Composition-based stats.
Identities = 84/302 (27%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 594 QHGCRYLQRKLEERNPEHVQMIFAETHMHVVELMTDPFGNYLCQKLLEYSNDDQRTRLIH 653
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ V+ +P + V+ AL+ L+ G+ VI
Sbjct: 654 NAAPQ---LVPIALNQHGTRALQKMIEFVS-TPQQIQMVIDALRGHVVDLVQDLNGNHVI 709
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A HC+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 710 QKCLNRLSAEDAQFIYDAVGAHCVIVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 769
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
SL + GNYVVQ++L+L +P + +C + G+ LS K S V++K L+
Sbjct: 770 SLVQDPFGNYVVQYILDLSEPHFTEPLCQSFLGNIPPLSKQKFSSNVIEKCLRTAEYPMR 829
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ + D Y NYV+QTA+ +R R++ ++ L ++R
Sbjct: 830 RRMIDEILVPRELDAMLRDSYANYVVQTAMDFADADNR----NRIIEAVRPILPSIRQTP 885
Query: 299 YG 300
+G
Sbjct: 886 HG 887
>gi|356528052|ref|XP_003532619.1| PREDICTED: uncharacterized protein LOC100799294 [Glycine max]
Length = 779
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 149/301 (49%), Gaps = 7/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+ G + +F + E M +G ++ K ++ CNE Q I+L
Sbjct: 472 QHGCRFLQKMFDEGTPEDVQVIFNEIIDHVVEPMVNPFGNYLMQKLLDVCNEEQRMQILL 531
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
IT + + S++ G+ V+KLI+ + + V SAL+ F L+ G+ V+
Sbjct: 532 IITEEPGQLVRISLNTHGTRVVQKLIETLKTRQQISLAV-SALEPGFLALIKDLNGNHVV 590
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL N N FI+ AA ++C+ +A H+ GC L I + G +++++ I NA
Sbjct: 591 QRCLLCLSNEDNKFIFVAAAKYCVDIATHQHGCCVLQRCIGHSNGEYQEKLIAEICANAL 650
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ + GNYVVQ +L+L+ P I G+Y LS K GS VV+K L N +
Sbjct: 651 LLAQDQFGNYVVQFILDLKIPSATACIRLQFEGNYAHLSRQKFGSHVVEKCLAVFNDENR 710
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ ELL+ + D + NYV+Q+AL R +H LV ++ H A R
Sbjct: 711 SRVILELLSMPHFEHLLQDPHANYVVQSAL----RHSEGRLHNLLVEAIESHKAISRNSP 766
Query: 299 Y 299
Y
Sbjct: 767 Y 767
>gi|412986524|emb|CCO14950.1| predicted protein [Bathycoccus prasinos]
Length = 699
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 161/310 (51%), Gaps = 17/310 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ K S +D F + +LM +G ++ K +E C++ Q A ++ +
Sbjct: 381 GCRFLQRKFDEDGSAAIDACFDEIIEEAVDLMMDPFGNYLLQKLLECCSDKQRADVVRAV 440
Query: 63 TFQDQ-----LFLLASV--DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
+ ++ L L S+ + G+ +V+KLI+ ++ S + AL+ L+
Sbjct: 441 SVVNENANTGLPELVSIALNAHGTRAVQKLIETLS-SDEEIELTTKALRPGVVTLIKDLN 499
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ +CL+ N FIY+AA +H + +A H GC L ID+ +++ ++ I
Sbjct: 500 GNHVVQRCLQRLSAEDNQFIYEAAKKHSVEIATHRHGCCVLQRCIDHATEEQKRPLVQEI 559
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ A +LSR GNYVVQ++L+L + + L G+Y +LS+ K S VV+K LK
Sbjct: 560 ADQALTLSRDPFGNYVVQYILDLGLSWANAEVMMRLVGNYAELSMQKFSSNVVEKCLKLA 619
Query: 236 NA-----VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ + +V E+++S + ++ D YGNYV+Q+ L+ T + +H LV +++ H
Sbjct: 620 DQQLEEHRNVVVREIMSSPLLDRLLMDPYGNYVVQSTLMVT----KGPLHADLVERIRPH 675
Query: 291 LAALRVMKYG 300
L ++ +G
Sbjct: 676 LPLIKNSPFG 685
>gi|392571884|gb|EIW65056.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 992
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 22/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F +LM+ +G ++ K +E + Q +I
Sbjct: 543 QHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDEQRNVICE 602
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL-------LYHVMSALKRLFKFLMMT 113
+ Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 603 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDLRCNGQIHSIILALSLHVVVLIKD 659
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++
Sbjct: 660 LNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASEHQRVQLVN 719
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 720 EITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCVR 779
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
N ++ ELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 780 VAEHNTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVEGIRP 833
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 834 VLPLIRNTPYG--KRIQNK 850
>gi|115396764|ref|XP_001214021.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193590|gb|EAU35290.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1019
Score = 124 bits (312), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 141/270 (52%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL ++ + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 616 QHGCRYLQRKLEERNAEHVQMIFEETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTTLIN 675
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ +L+ L+ G+ VI
Sbjct: 676 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTTTVIQSLQDHVVELVQDLNGNHVI 731
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 732 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 791
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 792 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADVQIR 851
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
+++E+L +++ ++ D + NYV+QTA+
Sbjct: 852 RQMIDEMLAGNELEKMLRDSFANYVVQTAM 881
>gi|367054818|ref|XP_003657787.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
gi|347005053|gb|AEO71451.1| hypothetical protein THITE_2123815 [Thielavia terrestris NRRL 8126]
Length = 1029
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 164/313 (52%), Gaps = 18/313 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ G +YLQ++L ++RI ++ + W+ + ELM+ +G ++ K +E CN+ + +
Sbjct: 619 QHGCRYLQKQL---ENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDDERTV 675
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
+I + + ++++ G+ +++K+I+ V +P + ++ AL+ L+ G+
Sbjct: 676 LIQNASSD---LVRIALNQHGTRALQKMIEHVT-TPVQINLIVEALRNQVVELIQDLNGN 731
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI KCL FI+ A +HC+ + H GC L ID+ G+++ ++ I+
Sbjct: 732 HVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQKVWLIERITA 791
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQ 235
+A +L + GNYVVQ+V++L + + + + LS K S VV+K L+ +
Sbjct: 792 HAVTLVQDPFGNYVVQYVIDLNEETFTEPLVQQFQNRIAALSKHKFSSNVVEKCLRCASE 851
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ IV ELL +I ++ D +GNYVIQTAL + + RLV ++ +L ++R
Sbjct: 852 QSRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYSTPMSK----HRLVEAIRPNLPSIR 907
Query: 296 VMKYGSNKEIQKK 308
YG + IQ K
Sbjct: 908 ATPYG--RRIQAK 918
>gi|392597028|gb|EIW86350.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 981
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 18/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMS--GQYGRFVFGKFIESCNESQLALI 58
+ G +YLQ+KL G D +F ELM+ +G ++ K +E + Q LI
Sbjct: 544 QHGCRYLQKKLEEGVVEHRDMIFRETFSHFAELMTVLDPFGNYLCQKLLEYSTDEQRNLI 603
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ Q + S++ G+ +V+K+I ++ + + ++ AL L+ G+
Sbjct: 604 CESVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQI-HSIILALSLHVVVLIKDLNGNH 659
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++ I+ N
Sbjct: 660 VIQKCLNKLSPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRIQLVNEITYN 719
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A +L + GNYVVQ+VL+L D + + G+ LS+ K S V++K ++ +
Sbjct: 720 ALTLVQDPYGNYVVQYVLDLNDNRFSEGVIRQFTGNVCALSVQKFSSNVIEKCIRVAEHS 779
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
++EE+LN ++ ++ D YGNY +QTAL D QR LV ++ L +
Sbjct: 780 TRKILIEEVLNRSRLEKLLRDSYGNYCVQTAL------DYAEASQRALLVEGIRPVLPLI 833
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 834 RNTPYG--KRIQNK 845
>gi|320591503|gb|EFX03942.1| RNA-binding protein [Grosmannia clavigera kw1407]
Length = 1112
Score = 124 bits (311), Expect = 5e-26, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 158/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ++L + + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 665 QHGCRYLQKQLENRNPEQVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDDERTVLIQ 724
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
QD + + ++++ G+ +++K+I+ ++ + ++ AL+ L+ G+ VI
Sbjct: 725 NAA-QDMVRI--ALNQHGTRALQKMIEFISTEAQVQI-IIEALRHCVVDLIKDLNGNHVI 780
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A C+ + H GC L ID+ G ++ ++ I+ A
Sbjct: 781 QKCLNKLTPANAQFIFDAVGGACVEVGTHRHGCCVLQRCIDHASGDQKVWLIQRITEEAV 840
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++++L D + + RG LS K S VV+K L+ + +
Sbjct: 841 TLIQDPYGNYVVQYIIDLNDLNFTEPLVARFRGRICSLSRHKFSSNVVEKCLRCSLEPSR 900
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEE+LNS ++ ++ D Y NYV+QTAL + RLV ++ LA +R
Sbjct: 901 DMIVEEVLNSGEVERLVRDSYANYVVQTALEYATPY----MKARLVDSIRPFLAQIRSTP 956
Query: 299 YGSNKEIQKK 308
+G + IQ K
Sbjct: 957 HG--RRIQAK 964
>gi|281204898|gb|EFA79092.1| Conserved hypothetical protein [Polysphondylium pallidum PN500]
Length = 1346
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 162/312 (51%), Gaps = 14/312 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL GD + + +F V + ELM+ +G ++ K +E CN+ Q +II
Sbjct: 1036 QHGCRFLQKKLEDGDEPLTEIIFKEVCEYMLELMTDPFGNYLCQKLLEHCNDRQRLMIID 1095
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + S++ G+ +V+K+I+ + +P + + +L L+ G+ VI
Sbjct: 1096 KVGPD---IVRISMNMHGTRAVQKMIEFLT-TPEQIALIKKSLANYVVPLIQDLNGNHVI 1151
Query: 121 LKCLEPSYNHKNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL N FIY + + +C+ +A H GC L ID+ S++ Q+++ + N
Sbjct: 1152 QKCLNKLSPPDNQFIYDSVSSSANCIAVATHRHGCCVLQRCIDHASESQKFQLINEVISN 1211
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYVVQ+VL+L P L + G+ L+ K S VV+K L + +
Sbjct: 1212 SLVLVQDPFGNYVVQYVLDLPFPGLATEMAKRFLGNVPILATQKFSSNVVEKCLHVADPM 1271
Query: 239 HY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+++E+++ D + + D + NYVIQT+L T+ + H +LV ++ HL L+
Sbjct: 1272 TRGNLIQEIIDCDILHNLLQDPFANYVIQTSL--TIAEPHQ--HTKLVEAIRPHLPMLKN 1327
Query: 297 MKYGSNKEIQKK 308
YG K IQ K
Sbjct: 1328 TPYG--KRIQNK 1337
>gi|189195174|ref|XP_001933925.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979804|gb|EDU46430.1| mRNA binding protein Pumilio 2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1009
Score = 124 bits (311), Expect = 6e-26, Method: Composition-based stats.
Identities = 81/302 (26%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL + + +F + ELM+ +G ++ K +E CN+ Q ++
Sbjct: 603 QHGCRFLQKKLEERNPEHIQIIFDETALHVVELMTDPFGNYLCQKLLEYCNDEQRNTLVR 662
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + ++ G+ +++K+I+ ++ ++ AL L+ G+ VI
Sbjct: 663 NAT---SAMVQIAFNQHGTRALQKMIEFISTDEQT-QMIIQALSGEVVDLIQDLNGNHVI 718
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + FI+ A EHC+ + H GC L ID+ G ++ ++ I+ ++
Sbjct: 719 QKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDLIRKITAHSF 778
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
L + GNYV+Q++L+L D +C +G +LS+ K S V++K ++
Sbjct: 779 QLVQDPFGNYVIQYILDLNDASFTTPMCQGFQGKICELSMQKFSSNVIEKCIRCAEPQVK 838
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELL+ +Q+ + D +GNYVIQTAL L +H L+ ++ L ++R
Sbjct: 839 AMMIEELLDVEQLNSLMRDSFGNYVIQTAL--EFAPAELCMH--LIEMMRPLLPSIRQTP 894
Query: 299 YG 300
YG
Sbjct: 895 YG 896
>gi|449452777|ref|XP_004144135.1| PREDICTED: uncharacterized protein LOC101212397 [Cucumis sativus]
Length = 746
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ S G ++ +F + ELM +G ++ K + C+E Q I+
Sbjct: 432 QHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGVCDEDQRLQILY 491
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI +L + S + G+ +V+KLI+ + ++P ++S LK LM G+ V
Sbjct: 492 KINRPGELIRI-SCNMHGTRAVQKLIETL-KTPEQFSLIVSLLKTGIVILMKNVNGNHVA 549
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
CL+ P Y K F++ AA + C+ +A GC L + R ++L +
Sbjct: 550 QHCLQYLMPDYIGK--FLFDAATKSCVEVATDRHGCCVLQKCLAVSDARHRDRLLSEVVR 607
Query: 178 NAASLSRHRSGNYVVQHVLNLED-----PFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
NA LS+ + GNYVVQ L L P++ I L GH+ DLS+ K S VV++ +
Sbjct: 608 NALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQKYSSNVVERCV 667
Query: 233 KYQNA-VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ + +V+EL+N ++ Q+ + YGNY +Q L + + SVH +LV ++ H+
Sbjct: 668 YAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGIC-KSSVHAKLVAAIRPHV 726
Query: 292 AALRVMKYG 300
LR YG
Sbjct: 727 PLLRTNMYG 735
>gi|293333240|ref|NP_001169187.1| hypothetical protein [Zea mays]
gi|223975405|gb|ACN31890.1| unknown [Zea mays]
gi|413925374|gb|AFW65306.1| hypothetical protein ZEAMMB73_251972 [Zea mays]
Length = 754
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 149/302 (49%), Gaps = 7/302 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++ ++LQ+ LS G +DK+F + +LM ++ K +E C Q +I
Sbjct: 439 QDACRFLQKLLSEGTQEDIDKIFGEIIDNVGDLMVDPTAHYLVQKILEECTNDQRTHMIR 498
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+IT AS + G+ V+K+I + +P + ++SAL LM G+ V+
Sbjct: 499 EITKAPIKLHKASCNVHGTRVVQKVIDTM-NTPDQVSMLVSALNTGMMCLMTDSYGNHVV 557
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ FI +AA L LA GC L I + +R +L I+ +A
Sbjct: 558 DHCLQKLLPEHKAFILEAAASCYLQLARDRHGCCVLQKCIGHSSDEQRNNLLCKITSSAL 617
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+LS GNYV+Q +L+L ++ + L GH+ +LS+ KCGS VV+ LK +
Sbjct: 618 TLSEDPYGNYVIQFILDLNIEWITVRVVDELAGHFGNLSMQKCGSHVVEHCLKLAPRLIC 677
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ EL++ ++L + D+YGN+VIQTAL +Q + H V ++ H A ++
Sbjct: 678 DRIINELMHDPKLLDIILDQYGNFVIQTAL----KQCQGEHHAAFVETIKPHTAVMQSNM 733
Query: 299 YG 300
YG
Sbjct: 734 YG 735
>gi|449493600|ref|XP_004159369.1| PREDICTED: uncharacterized LOC101212397 [Cucumis sativus]
Length = 746
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 14/309 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ S G ++ +F + ELM +G ++ K + C+E Q I+
Sbjct: 432 QHGCRFLQRMFSEGTKEDIEMIFGEIIHHVSELMVDPFGNYLIQKLLGVCDEDQRLQILY 491
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI +L + S + G+ +V+KLI+ + ++P ++S LK LM G+ V
Sbjct: 492 KINRPGELIRI-SCNMHGTRAVQKLIETL-KTPEQFSLIVSLLKTGIVILMKNVNGNHVA 549
Query: 121 LKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
CL+ P Y K F++ AA + C+ +A GC L + R ++L +
Sbjct: 550 QHCLQYLMPDYIGK--FLFDAATKSCVEVATDRHGCCVLQKCLAVSDARHRDRLLSEVVR 607
Query: 178 NAASLSRHRSGNYVVQHVLNLED-----PFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
NA LS+ + GNYVVQ L L P++ I L GH+ DLS+ K S VV++ +
Sbjct: 608 NALVLSQDQYGNYVVQFALELARCPSILPWVTSGIFKRLEGHFSDLSIQKYSSNVVERCV 667
Query: 233 KYQNA-VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ + +V+EL+N ++ Q+ + YGNY +Q L + + SVH +LV ++ H+
Sbjct: 668 YAGDEYLAKVVDELINDERFSQIMLNPYGNYAVQAVLARSGIC-KSSVHAKLVAAIRPHV 726
Query: 292 AALRVMKYG 300
LR YG
Sbjct: 727 PLLRTNMYG 735
>gi|242083470|ref|XP_002442160.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
gi|241942853|gb|EES15998.1| hypothetical protein SORBIDRAFT_08g015290 [Sorghum bicolor]
Length = 562
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 152/301 (50%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ++L G R +D +F VS +LM +G ++ K + C+ Q ++L
Sbjct: 256 QHGCRLLQQRLDDG-KREVDHIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDAGQRMALVL 314
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ +V+KLI+ + ++ + V+ AL+ F L+ G+ V+
Sbjct: 315 TLTADAFVLVRISLNVHGTRAVQKLIESL-RTREEISLVIDALRPGFLELIKDPNGNHVV 373
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ N I+ AA HCL + GC L I +G R +++ I+ N
Sbjct: 374 QKCLQAFEADDNKAIFDAAALHCLDIGMQCHGCCVLQRCIARSRGEHRDKLVAAIAGNGF 433
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ GNYVVQ+V++L+ P ++ G Y+ LS+ K S VV+K LK V
Sbjct: 434 KLAQDAYGNYVVQYVIDLKIPNANSSLAQQFEGKYIHLSMQKFSSNVVEKCLKVFKEVDK 493
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ E+L + + Q+ Y NYVI +AL + + S+H L ++ H+ LR
Sbjct: 494 AKIILEILATPHLEQLLQHPYANYVIYSAL----QNSKGSLHSALTNAIRPHVELLRTSP 549
Query: 299 Y 299
Y
Sbjct: 550 Y 550
>gi|320162710|gb|EFW39609.1| RNA-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1111
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 87/308 (28%), Positives = 160/308 (51%), Gaps = 12/308 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ K+ + ++ +F V ELM+ +G ++ K +E C E+Q I+ ++
Sbjct: 788 GCRFLQRKIEEQNESVIQIIFDEVFEHVGELMTDPFGNYLCQKLLEHCTEAQRTAIVQRV 847
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + S++ G+ +V+KL + + + + V+SA + L+ G+ VI +
Sbjct: 848 APE---LVSISLNMHGTRAVQKLTECLKERGQIEL-VISAFRDAVVTLIKDLNGNHVIQR 903
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ N FIY A +C+ +A H GC + IDN +++ Q+++ ++ + +L
Sbjct: 904 CLQRFSAADNQFIYDAVASNCVQVATHRHGCCVMQRCIDNATEAQKHQLVNEVTFHVLNL 963
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HY 240
+ GNYVVQ+VL+L P DA+ G+ L++ K S V++K L+
Sbjct: 964 VQDPFGNYVVQYVLDLNIPRFSDALVNQFLGNICPLAIQKFSSNVIEKCLRASEPATRTT 1023
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
++ ELL+ + ++ D +GNYVIQTAL Q +L++ +V ++ H +R YG
Sbjct: 1024 MMLELLDERWLPRLLQDPFGNYVIQTALGIGDAQ-QLNI---MVEGIRPHFNLIRHTPYG 1079
Query: 301 SNKEIQKK 308
K+I+ K
Sbjct: 1080 --KKIEAK 1085
>gi|116199395|ref|XP_001225509.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
gi|88179132|gb|EAQ86600.1| hypothetical protein CHGG_07853 [Chaetomium globosum CBS 148.51]
Length = 1010
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/313 (28%), Positives = 162/313 (51%), Gaps = 18/313 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ G +YLQ++L ++RI D+ + W+ + ELM+ +G ++ K +E CN+ + +
Sbjct: 608 QHGCRYLQKQL---ENRIPDQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNDDERTV 664
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
++ T + ++++ G+ +++K+I+ V + ++ AL+ L+ G+
Sbjct: 665 LVQNSTSN---MVTIALNQHGTRALQKMIEHVTTQVQINL-IVEALRNQVVELIQDLNGN 720
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI KCL FI+ A +HC+ + H GC L ID+ G+++ ++ I+
Sbjct: 721 HVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGAQKIWLIERITD 780
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQ 235
+A +L + GNYVVQ++++L +P + + +G LS K S VV+K L+ +
Sbjct: 781 HAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVKQFQGRIGMLSKHKFSSNVVEKCLRCAAE 840
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ IV ELL +I ++ D +GNYVIQTAL + RL+ ++ L ++R
Sbjct: 841 ESRDMIVSELLTPGEIDRLLRDSFGNYVIQTALDYATPMSK----HRLIEAIRPILPSIR 896
Query: 296 VMKYGSNKEIQKK 308
YG + IQ K
Sbjct: 897 ATPYG--RRIQAK 907
>gi|169596899|ref|XP_001791873.1| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
gi|160707392|gb|EAT90868.2| hypothetical protein SNOG_01219 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 123 bits (308), Expect = 1e-25, Method: Composition-based stats.
Identities = 85/310 (27%), Positives = 156/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL L +F + ELM+ +G ++ K +E N+ Q ++
Sbjct: 611 QHGCRFLQKKLEERVPESLQIIFDETAPHVVELMTDPFGNYLCQKLLEFANDEQRNTLVR 670
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ + ++ AL L+ G+ VI
Sbjct: 671 NAC---PAMVSIALNQHGTRALQKMIEFIS-TEEQTEMIIQALSGQVVDLIQDLNGNHVI 726
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + FI+ A EHC+ + H GC L ID+ G ++ ++ I+ ++
Sbjct: 727 QKCLNHLKSSEAQFIFDAVGEHCVIVGTHRHGCCVLQRCIDHASGYQKVDLVRKITAHSF 786
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L D +C RG V+LS K S V++K ++ +A
Sbjct: 787 HLVQDPFGNYVVQYILDLNDAAFTTPMCEGFRGKVVELSKQKFSSNVIEKCIRCAEMSAK 846
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EEL + +++ + D YGNYV+QTAL L +H L+ ++ L ++R
Sbjct: 847 QMLIEELCDVEELEHLMRDSYGNYVVQTAL--EFAPPALCIH--LIEIMRPILPSIRQTP 902
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 903 YG--RRIQSK 910
>gi|297839687|ref|XP_002887725.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
gi|297333566|gb|EFH63984.1| hypothetical protein ARALYDRAFT_476984 [Arabidopsis lyrata subsp.
lyrata]
Length = 653
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G S +F V ELM +G ++ K ++ C E Q I+L
Sbjct: 348 QHGCRFLQRIFDEGTSADAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRTQIVL 407
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + S++ +G+ V++L++ + ++ + V SAL+ F L+ G+ VI
Sbjct: 408 VATAEPGQLIRISLNAYGTRVVQRLVETI-RTGKQISLVKSALRPGFLDLIKDLNGNHVI 466
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA + C +A H GC L I +R++++ IS N+
Sbjct: 467 QRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSL 526
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++ L + +
Sbjct: 527 LLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRP 586
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL++ Q+ D Y N+VIQ AL T + +H LV ++ H + LR Y
Sbjct: 587 QIVRELISVPHFDQLLQDPYANFVIQAALAAT----KGPIHASLVEVIRPH-SILRNNPY 641
>gi|115488632|ref|NP_001066803.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|77555831|gb|ABA98627.1| Pumilio-family RNA binding repeat containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649310|dbj|BAF29822.1| Os12g0493900 [Oryza sativa Japonica Group]
gi|125579396|gb|EAZ20542.1| hypothetical protein OsJ_36154 [Oryza sativa Japonica Group]
Length = 520
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 156/301 (51%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L G R +D +F V+ ELM +G ++ K + C++ Q I+L
Sbjct: 214 QHGCRFLQQRLDDG-KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVL 272
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ +V+KLI+ + ++ + V+ AL+ F L+ G+ V+
Sbjct: 273 TLTKDPFVLVRISLNVHGTRAVQKLIESL-RTREEIQLVVQALRPGFLELIKDPNGNHVV 331
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ + N I++AA HCL + GC L I G +R++++ I+ N
Sbjct: 332 QRCLQSFDANDNKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGF 391
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L++ GNYVVQ+V++L+ P ++ +G Y+ LS+ K S VV+K LK +
Sbjct: 392 ELAQDAYGNYVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADK 451
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ ELL Q+ + NYVI +A+ + + S+H L ++ H+ LR
Sbjct: 452 ATIILELLAVPHFEQLLQHPFANYVIYSAI----QNSKGSLHSALTNAIRPHVELLRTSP 507
Query: 299 Y 299
Y
Sbjct: 508 Y 508
>gi|83765714|dbj|BAE55857.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 641
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 247 QHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALIN 306
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 307 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQDLNGNHVI 362
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 363 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 422
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 423 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADGPVR 482
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++ L ++R
Sbjct: 483 GQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPILPSIRQTP 538
Query: 299 YG 300
+G
Sbjct: 539 HG 540
>gi|225554623|gb|EEH02919.1| pumilio RNA binding protein [Ajellomyces capsulatus G186AR]
Length = 793
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 156/300 (52%), Gaps = 10/300 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 374 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTALINNA 433
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
QL +A +++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI K
Sbjct: 434 A--PQLVKIA-LNQHGTRALQKMIEFIS-TPEQTQTVINALRDRVVELVQDLNGNHVIQK 489
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 490 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 549
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 550 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSA 609
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+V+E+L ++ ++ D + NYV+QTA+ + R +LV ++ L A+R +G
Sbjct: 610 LVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPILPAIRQTPHG 665
>gi|380483203|emb|CCF40767.1| pumilio domain-containing protein [Colletotrichum higginsianum]
Length = 446
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 156/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 23 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 82
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ V +P + +++AL+ L+ G+ VI
Sbjct: 83 NAAVD---MVRIALNQHGTRALQKMIEFVT-TPTQIGMIINALRFQVVELIQDLNGNHVI 138
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 139 QKCLNKLSALDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGEQKVWLIAKITEHAP 198
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++++L +P + I + LS K S V++K L+ + +
Sbjct: 199 ILVQDPFGNYVVQYIIDLNEPTFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLRCSQEPSR 258
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEELL+ +I ++ D Y NYVIQTAL + RLV ++ L A+R
Sbjct: 259 DMIVEELLSPGEIERLLRDSYANYVIQTALEYATPHSKY----RLVDAIRPILPAIRSTP 314
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 315 YG--RRIQAK 322
>gi|225448285|ref|XP_002271130.1| PREDICTED: uncharacterized protein LOC100266352 [Vitis vinifera]
Length = 810
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 149/301 (49%), Gaps = 7/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + + +F + ELM +G ++ K ++ CNE Q I++
Sbjct: 503 QHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQILV 562
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+KLI+ + ++ + V+SAL+ F L+ G+ VI
Sbjct: 563 MLTEESGELVRISLNTHGTRVVQKLIETL-KTRQQISRVISALEPGFLALIKDLNGNHVI 621
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA ++C+ +A H+ GC L I + G R+ ++ IS N
Sbjct: 622 QRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGCCVLQRCISHSTGEYRENLVAEISSNGF 681
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L++ GNYVVQ +L L+ P + G+YV LS + S VV+K L +
Sbjct: 682 LLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHVVEKCLTVCTEENQ 741
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV ELL++ Q+ + NYVIQ AL + +H + ++ H A +R
Sbjct: 742 SRIVHELLSTSHFEQLLQHPHANYVIQKAL----QVYEGPLHNAFIEAIESHKAIMRNSP 797
Query: 299 Y 299
Y
Sbjct: 798 Y 798
>gi|429851913|gb|ELA27072.1| pumilio domain-containing protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 997
Score = 122 bits (305), Expect = 3e-25, Method: Composition-based stats.
Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 581 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERTVLIQ 640
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ V S + +++AL+ L+ G+ VI
Sbjct: 641 NAAAD---MVRIALNQHGTRALQKMIEFVTTSTQI-EMIINALRYQVVELIQDLNGNHVI 696
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 697 QKCLNKLSAKDAQFIFDAVGTNCVDVGTHRHGCCVLQRCIDHASGDQKVWLISKITEHAP 756
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++++L +P + I + LS K S V++K L+ + +
Sbjct: 757 ILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFKNRIGQLSRHKFSSNVIEKCLRCSQEPSR 816
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEELL +I ++ D Y NYVIQTAL + RLV ++ L ++R
Sbjct: 817 DMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHSKF----RLVDAIRPILPSIRSTP 872
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 873 YG--RRIQAK 880
>gi|195635993|gb|ACG37465.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 150/301 (49%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ++L G R +D +F VS +LM +G ++ K + C++ Q ++L
Sbjct: 173 QHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRMTLVL 231
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + S++ G+ +V+KLI+ ++ + VM AL+ F L+ G+ V+
Sbjct: 232 TLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGL-VMDALRPGFLELIKDTNGNHVV 290
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ N I+ AA HC+ + GC L I +G R +++ I+ N
Sbjct: 291 QKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAAIAHNGF 350
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ GNYVVQ VL+L+ P ++ G Y+ LS+ K S VV+K LK V
Sbjct: 351 KLAQDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKVFKEVDK 410
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ ELL + + Q+ Y NYV+ +AL + + S+H L+ + H LR
Sbjct: 411 AKIILELLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHEELLRTSP 466
Query: 299 Y 299
Y
Sbjct: 467 Y 467
>gi|259489449|tpe|CBF89730.1| TPA: RNA-binding protein, putative (AFU_orthologue; AFUA_1G02510)
[Aspergillus nidulans FGSC A4]
Length = 650
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + L +F ELM+ +G ++ K +E N+ Q +++
Sbjct: 248 QHGCRYLQRKLEERNDDQLQMIFAETHSHVIELMTDPFGNYLCQKLLEYSNDEQRTVLVN 307
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K QL +A +++ G+ +++K+I+ ++ V+ ALK L+ G+ VI
Sbjct: 308 KAA--PQLVKIA-LNQHGTRALQKMIEFISTEE-QTQTVIDALKDHVVELVQDLNGNHVI 363
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL K+ FIY A C+ + H GC L ID+ G++R +++ I+ NA
Sbjct: 364 QKCLNRLTAEKSQFIYDAVGAQCVTVGTHRHGCCVLQRCIDHASGAQRARLIEQITENAF 423
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
+L + GNYVVQ++L+L + + +C LS K S V++K L+ +
Sbjct: 424 ALVQDPFGNYVVQYILDLAEARFTEPLCREFLSRIPKLSKHKFSSNVIEKCLRTADEEMR 483
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L D++ ++ D Y NYV+QTA M + R+V ++ L +LR
Sbjct: 484 RQMIEEMLAGDELEKMLRDSYANYVVQTA----MDYADPATRARIVKYIEPILPSLRGTP 539
Query: 299 YG 300
+G
Sbjct: 540 HG 541
>gi|238483549|ref|XP_002373013.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
gi|220701063|gb|EED57401.1| RNA-binding protein, putative [Aspergillus flavus NRRL3357]
Length = 911
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 517 QHGCRYLQRKLEERNPDHVQMIFDETHLHVVELMTDPFGNYLCQKLLEYSNDEQRTALIN 576
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 577 NAAHQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIHALEDHVVELVQDLNGNHVI 632
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 633 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 692
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 693 ALVQDPFGNYVVQYILDLAEPHFTEPLCQTFRGNIPALSKQKFSSNVIEKCLRTADGPVR 752
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L+ ++ ++ D + NYV+QTA+ + R RL+ ++ L ++R
Sbjct: 753 GQLIEEMLSGSELEKMLRDSFANYVVQTAMDFADSETRT----RLIDAIRPILPSIRQTP 808
Query: 299 YG 300
+G
Sbjct: 809 HG 810
>gi|212275350|ref|NP_001130994.1| uncharacterized protein LOC100192099 [Zea mays]
gi|194690654|gb|ACF79411.1| unknown [Zea mays]
gi|413916502|gb|AFW56434.1| maternal protein pumilio [Zea mays]
Length = 479
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 149/301 (49%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ++L G R +D +F VS +LM +G ++ K + C++ Q ++L
Sbjct: 173 QHGCRLLQQRLDDG-KREVDYIFAGVSRHAAQLMVDPFGNYLMQKLLAVCDDGQRMTLVL 231
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + S++ G+ +V+KLI+ ++ + VM AL+ F L+ G+ V+
Sbjct: 232 TLTADPFALVRISLNVHGTRAVQKLIERLSAREEIGL-VMDALRPGFLELIKDTNGNHVV 290
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ N I+ AA HC+ + GC L I +G R +++ I+ N
Sbjct: 291 QKCLHSFASNDNKAIFAAAALHCVDIGMQIHGCCVLQRCIARSRGEHRDKLVAAIAHNGF 350
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L+ GNYVVQ VL+L+ P ++ G Y+ LS+ K S VV+K LK V
Sbjct: 351 KLAEDAYGNYVVQVVLDLKIPTANSSLAQQFGGKYIHLSMQKFSSNVVEKCLKVFKEVDK 410
Query: 240 -YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ ELL + + Q+ Y NYV+ +AL + + S+H L+ + H LR
Sbjct: 411 AKIILELLATPHLEQLLPHCYANYVVYSAL----KNSKGSLHSALINAILPHEELLRTSP 466
Query: 299 Y 299
Y
Sbjct: 467 Y 467
>gi|345568412|gb|EGX51306.1| hypothetical protein AOL_s00054g376 [Arthrobotrys oligospora ATCC
24927]
Length = 965
Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/328 (26%), Positives = 159/328 (48%), Gaps = 30/328 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL + + ++ +F F ELM+ +G ++ K +E N Q + ++
Sbjct: 575 QHGCRFLQRKLEEQNPKDIEIIFRETQAFIVELMTDPFGNYLCQKLLEHTNNEQRSKLVN 634
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V++AL+ L+ G+ VI
Sbjct: 635 NAAPH---LVEIALNQHGTRALQKMIEFLS-TPDQIQTVINALRGKVVELIQDLNGNHVI 690
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A ++ + + H GC L ID+ +R Q++ I+ NA
Sbjct: 691 QKCLNRLKPEDAQFIFDAVGKNSVTVGTHRHGCCVLQRCIDHASTPQRAQLIAHITENAF 750
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ----- 235
+L R GNYVVQ++L+L +P L + + G ++LS+ K S V++K +Q
Sbjct: 751 ALVRDPFGNYVVQYILDLGEPELAEPMIHKFLGRIIELSMQKFSSNVIEKVCPFQIQRPI 810
Query: 236 ---------------NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH 280
+V+E++N ++ ++ D Y NYVIQTAL R
Sbjct: 811 PSGLTLAQCIRVSSKETRALMVKEIVNPPELEKLIRDSYANYVIQTALDYAEADSR---- 866
Query: 281 QRLVTKLQQHLAALRVMKYGSNKEIQKK 308
LV L+ + ++R+ YG + IQ K
Sbjct: 867 TMLVDNLRPIMPSIRMTPYG--RRIQSK 892
>gi|330925771|ref|XP_003301186.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
gi|311324291|gb|EFQ90713.1| hypothetical protein PTT_12629 [Pyrenophora teres f. teres 0-1]
Length = 1012
Score = 120 bits (302), Expect = 6e-25, Method: Composition-based stats.
Identities = 80/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL + + +F + ELM+ +G ++ K +E CN+ Q ++
Sbjct: 605 QHGCRFLQKKLEERNHEHIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDEQRNTLVR 664
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + ++ G+ +++K+I+ ++ ++ AL L+ G+ VI
Sbjct: 665 NAT---PAMVQIAFNQHGTRALQKMIEFISTDEQT-QMIIQALSGEVVDLIQDLNGNHVI 720
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + FI+ A EHC+ + H GC L ID+ G ++ ++ I+ ++
Sbjct: 721 QKCLNHLKSPEAQFIFDAVGEHCVVVGTHRHGCCVLQRCIDHASGFQKVDLIRKITAHSF 780
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
L + GNYV+Q++L+L D +C + +LS+ K S V++K ++
Sbjct: 781 QLVQDPFGNYVIQYILDLNDASFTTPMCQGFQTKICELSMQKFSSNVIEKCIRCAEPQVK 840
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELL+ +Q+ + D +GNYVIQTAL L +H L+ ++ L ++R
Sbjct: 841 AMMIEELLDVEQLNSLMRDSFGNYVIQTAL--EFAPAELCMH--LIEMMRPLLPSIRQTP 896
Query: 299 YG 300
YG
Sbjct: 897 YG 898
>gi|310798475|gb|EFQ33368.1| hypothetical protein GLRG_08647 [Glomerella graminicola M1.001]
Length = 802
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 155/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 391 QHGCRYLQKKLEERNPEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 450
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ V +P + +++AL+ L+ G+ VI
Sbjct: 451 NAAAD---MVRIALNQHGTRALQKMIEFVT-TPTQIEMIINALRFQVVELIQDLNGNHVI 506
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A HC+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 507 QKCLNKLSAQDAQFIFDAVGTHCVDVGTHRHGCCVLQRCIDHASGDQKTWLIAKITEHAP 566
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++++L +P + I + LS K S V++K L+ + +
Sbjct: 567 ILVQDPFGNYVVQYIIDLNEPSFTEPIVRMFQNRIGQLSRHKFSSNVIEKCLRCSQEPSR 626
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IVEELL +I ++ D Y NYVIQTAL + RLV ++ L ++R
Sbjct: 627 DMIVEELLTPGEIERLLRDSYANYVIQTALEYATPHGKF----RLVDAIRPILPSIRSTP 682
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 683 YG--RRIQAK 690
>gi|302923594|ref|XP_003053709.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
gi|256734650|gb|EEU47996.1| hypothetical protein NECHADRAFT_65753 [Nectria haematococca mpVI
77-13-4]
Length = 829
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 163/312 (52%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL ++ + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 372 QHGCRYLQKKLEERNAEQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 431
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 432 NAS-QDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQDLNGNHVI 487
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 488 QKCLNKLTAPDAQFIFDAVGHNCIEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHAR 547
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + GNYVVQ++++L +P + I +G LS K S V++K L+ A
Sbjct: 548 VLVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCISQLSRHKFSSNVIEKCLRCAQAPSK 607
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
IVEELL ++ ++ D + NYVIQTAL + + HQ+ LV ++ L +R
Sbjct: 608 DMIVEELLGPQEMERLLRDSFANYVIQTAL------EYATPHQKYQLVESIRPILPQIRT 661
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 662 TPYG--RRIQAK 671
>gi|121703235|ref|XP_001269882.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
gi|119398025|gb|EAW08456.1| RNA-binding protein, putative [Aspergillus clavatus NRRL 1]
Length = 1002
Score = 120 bits (301), Expect = 8e-25, Method: Composition-based stats.
Identities = 82/302 (27%), Positives = 152/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL D + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 597 QHGCRYLQRKLEERDPEHVQLIFDETHLHVVELMTDPFGNYLCQKLLEYSNDDQRTALIN 656
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ + V+ AL+ L+ G+ VI
Sbjct: 657 NAAHQ---LVKIALNQHGTRALQKMIEFISTAEQT-QTVIQALRDHVVELVQDLNGNHVI 712
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G +R +++ I+ NA
Sbjct: 713 QKCLNRLSAEDAQFIYDAVGGNCVVVGTHRHGCCVLQRCIDHASGEQRARLIAQITSNAF 772
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C + RG+ LS K S V++K L+ +
Sbjct: 773 ALVQDPFGNYVVQYILDLAEPHFTEPLCQSFRGNIPALSKQKFSSNVIEKCLRTADFQIK 832
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 833 RQMIDEMLVGVELEKMLRDSFANYVVQTAMDFADPETR----GRIVDAIRPILPSIRQTP 888
Query: 299 YG 300
+G
Sbjct: 889 HG 890
>gi|336364324|gb|EGN92684.1| hypothetical protein SERLA73DRAFT_190697 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378294|gb|EGO19452.1| hypothetical protein SERLADRAFT_478869 [Serpula lacrymans var.
lacrymans S7.9]
Length = 597
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 155/319 (48%), Gaps = 22/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F +LM+ +G ++ K +E + Q +I
Sbjct: 135 QHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDEQRNVICE 194
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL-------LYHVMSALKRLFKFLMMT 113
+ Q + S++ G+ +V+K+I ++ ++ ++ AL L+
Sbjct: 195 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQTDVRYNTQIHSIIVALSLHVVVLIKD 251
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL N FIY A +C+ +A H GC L ID+ +R Q+++
Sbjct: 252 LNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVLQRCIDHASDHQRVQLVN 311
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ NA +L + GNYVVQ++L+L D DA+ G+ LS+ K S V++K ++
Sbjct: 312 EITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVCALSVQKFSSNVIEKCIR 371
Query: 234 Y--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
+ ++EELLN ++ ++ D YGNY +QTAL D QR LV ++
Sbjct: 372 VAEHSTRKILIEELLNRTRLEKLLRDSYGNYCVQTAL------DYAEPAQRALLVDGIRP 425
Query: 290 HLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 426 VLPLIRNTPYG--KRIQNK 442
>gi|297790088|ref|XP_002862953.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297308739|gb|EFH39212.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ G F I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEGVSYFKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSD 105
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+ L +A+ R F + K + V ++ + +Y+ L H L LAC +
Sbjct: 106 DADALF---CAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACDQ 162
Query: 151 QGCINLNNFI-DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I D+ R Q+L L++ NA LS SGN+VVQHVL L D I
Sbjct: 163 HGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAV 222
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L GH +DLS K GS++V+K L+ + ++ +V ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T ++ + LV KL L LR +GSN
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFLHLLR-RSHGSN 316
>gi|398407841|ref|XP_003855386.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
gi|339475270|gb|EGP90362.1| pumilio-related RNA binding protein [Zymoseptoria tritici IPO323]
Length = 1060
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 156/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL + + + +F V ELM +G ++ K +ES N+ Q +I
Sbjct: 625 QHGCRFLQRKLEERNEQTVQAIFEEVRNHMIELMVDPFGNYLCQKLLESANDDQRTELIK 684
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q ++++ G+ +++K+I+ ++ +P ++ AL+ L+ G+ VI
Sbjct: 685 NAMPQ---MTKIALNQHGTRALQKMIEFIS-TPEQTALIIEALRNDVVLLIQDLNGNHVI 740
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ FI+ A +C+ + H GC L ID+ G ++ +++ + NA
Sbjct: 741 QKCLNHLSSNDAIFIFDAVGANCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVIRNAY 800
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
SL + GNYVVQ++L+L +P + +C A G +LS K S V++K ++
Sbjct: 801 SLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIANLSRQKFSSNVMEKCIRCASNETK 860
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ E++ I ++ D + NYV+QTA+ + +D + LV ++ + A+R
Sbjct: 861 RAIISEIMAPQTIEKMLRDGFANYVVQTAM-DFADED---LKPTLVENIRMVIPAIRNTP 916
Query: 299 YGSNKEIQKK 308
+G + IQ K
Sbjct: 917 HG--RRIQSK 924
>gi|440631710|gb|ELR01629.1| hypothetical protein GMDG_00005 [Geomyces destructans 20631-21]
Length = 1077
Score = 120 bits (300), Expect = 1e-24, Method: Composition-based stats.
Identities = 83/311 (26%), Positives = 158/311 (50%), Gaps = 13/311 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL ++ + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 638 QHGCRFLQKKLEERNAEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNDEERTVLIE 697
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q L ++++ G+ +++K+I+ ++ + + ++ AL+ L+ G+ VI
Sbjct: 698 NAS---QDLLRIALNQHGTRALQKMIEFISTAGQI-QTIIEALRYQVVELIQDLNGNHVI 753
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A HC+ + H GC L ID+ G ++ ++ IS NA
Sbjct: 754 QKCLNKLSPLDAQFIFDAVGRHCVDVGTHRHGCCVLQRCIDHASGDQKAWLIRQISNNAF 813
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++L+L +P + + G LS K S V++K L+ + +
Sbjct: 814 TLVQDPFGNYVVQYILDLNEPIFTEPLVAMFAGRVGQLSRQKFSSNVIEKCLRCAQEPSK 873
Query: 239 HYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
++EE+L + L+ + D + NYV+QTAL ++ RL+ ++ L +R
Sbjct: 874 DMLIEEMLATPADLERLLRDSFANYVVQTAL----DYANPAMKTRLIDAIRPILPQIRTT 929
Query: 298 KYGSNKEIQKK 308
YG + IQ K
Sbjct: 930 PYG--RRIQAK 938
>gi|297793565|ref|XP_002864667.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297310502|gb|EFH40926.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 140/275 (50%), Gaps = 7/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ G F I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEGVSYFKGMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLLGKSD 105
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+ L +A+ R F + K + V ++ + +Y+ L H L LAC +
Sbjct: 106 DADALF---CAAILRRFLHITTDKYATYVTIRAMVVFDKEMKKAMYEHILYHALDLACDQ 162
Query: 151 QGCINLNNFI-DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I D+ R Q+L L++ NA LS SGN+VVQHVL L D I
Sbjct: 163 HGCIALNDIITDSDDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYDLRCTHNIAV 222
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L GH +DLS K GS++V+K L+ + ++ +V ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLYGHCIDLSFKKYGSYIVEKLLEAEESMVVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T ++ + LV KL L LR +GSN
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFLHLLR-RSHGSN 316
>gi|346972361|gb|EGY15813.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 905
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 455 QHGCRYLQKKLEERNPDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEYCNDDERTVLIQ 514
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
QD + + ++++ G+ +++K+I+ V S + ++ AL+ L+ G+ VI
Sbjct: 515 NAA-QDMVRI--ALNQHGTRALQKMIEFVTTSI-QVQMIIDALRYRVVELIQDLNGNHVI 570
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A HC+ + H GC L ID+ G+++ ++ I+ +A
Sbjct: 571 QKCLNKLSAPDAQFIFDAVGNHCVDVGTHRHGCCVLQRCIDHADGAQKVWLIGKITEHAP 630
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
L + GNYVVQ++++L +P + + R LS K S V++K L+ A
Sbjct: 631 VLVQDPFGNYVVQYIIDLNEPAFTEPVVGMFRNRICQLSRHKFSSNVIEKLLRCSQAQGR 690
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV+ELL ++ ++ D Y NYVIQTAL + + R+V ++ L A+R
Sbjct: 691 DMIVDELLQPGEMDRLLRDSYANYVIQTALEYATPEGK----HRMVEVIRPFLPAVRSTP 746
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 747 YG--RRIQAK 754
>gi|451994865|gb|EMD87334.1| hypothetical protein COCHEDRAFT_1113338 [Cochliobolus
heterostrophus C5]
Length = 922
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 153/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+KL ++ + +F + ELM+ +G ++ K +E CN+ Q +++
Sbjct: 516 QHGCRFLQKKLEERNAENIQIIFDETAPHVVELMTDPFGNYLCQKLLEFCNDEQRNILVR 575
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++ G+ +++K+I+ ++ ++ AL L+ G+ VI
Sbjct: 576 NAA---PAMVQIAFNQHGTRALQKMIEFISTDD-QTQMIIRALSGQVVDLIQDLNGNHVI 631
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A EHC+ + H GC L ID+ G ++ ++ I+ ++
Sbjct: 632 QKCLNHLKSPDAQFIFDAVGEHCITVGTHRHGCCVLQRCIDHASGFQKVDLIRKITAHSF 691
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYVVQ++L+L D +C +G +LS K S V++K ++ +
Sbjct: 692 HLVQDPFGNYVVQYILDLNDASFTTPMCQGFQGKICELSKQKFSSNVIEKCIRCAEPHVK 751
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EELL+ +Q+ Q+ D YGNYVIQTAL L VH L+ ++ L ++R
Sbjct: 752 GMMIEELLDVEQLEQLMRDSYGNYVIQTAL--EFAPAELCVH--LIEAMRPILPSIRQTP 807
Query: 299 YG 300
YG
Sbjct: 808 YG 809
>gi|378727687|gb|EHY54146.1| hypothetical protein HMPREF1120_02321 [Exophiala dermatitidis
NIH/UT8656]
Length = 1006
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 84/302 (27%), Positives = 154/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G+ + +F ELM+ +G ++ K E C E Q +I
Sbjct: 600 QHGCRYLQRKLEDGNEEHIQAIFAETCPHIIELMTDPFGNYLCQKLFEFCTEEQRTALI- 658
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L +A +++ G+ +++K+I+ V ++ + ++ AL L+ G+ V+
Sbjct: 659 -NTAAPALTTIA-LNQHGTRALQKMIEFV-RTEEQVETIIRALSDRVVDLVQDLNGNHVV 715
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ FIY A ++C+ + H GC L ID+ +G +R Q++ I+ A
Sbjct: 716 QKCLTRLGAERSQFIYDAVGKYCVVVGTHRHGCCVLQRCIDHAQGFQRAQLIARITHCAF 775
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
L + GNYVVQ++L+L++ +C + G LS K S V++K L+ ++
Sbjct: 776 DLVQDPFGNYVVQYILDLDEISFTKPLCESFLGRIPQLSKQKFSSNVIEKCLRTADSDTK 835
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++EE+L +++ ++ D + NYV+QTAL Q ++ RLV ++ L ++
Sbjct: 836 RRMIEEMLIGNELEKMLRDAFANYVVQTALEFADPQTKM----RLVDAVRPILPMIKQTP 891
Query: 299 YG 300
+G
Sbjct: 892 HG 893
>gi|22330712|ref|NP_177940.2| pumilio 7 [Arabidopsis thaliana]
gi|313471413|sp|Q9C9R6.2|PUM7_ARATH RecName: Full=Putative pumilio homolog 7, chloroplastic;
Short=APUM-7; Short=AtPUM7; Flags: Precursor
gi|332197954|gb|AEE36075.1| pumilio 7 [Arabidopsis thaliana]
Length = 650
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 148/300 (49%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G S +F V ELM +G ++ K ++ C E Q I+L
Sbjct: 345 QHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRTQIVL 404
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + S++ +G+ V++L++ + +S + V AL+ F L+ G+ VI
Sbjct: 405 VATEEPGQLIRISLNAYGTRVVQRLVETI-RSGKQISLVKLALRPGFLDLIKDLNGNHVI 463
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA + C +A H GC L I +R++++ IS N+
Sbjct: 464 QRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSL 523
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++ L + +
Sbjct: 524 LLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRP 583
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL++ Q+ D Y N+VIQ AL T + +H LV ++ H + LR Y
Sbjct: 584 QIVRELVSVPHFDQLLQDPYANFVIQAALAAT----KGPLHASLVEVIRPH-SILRNNPY 638
>gi|341038523|gb|EGS23515.1| pumilio domain-containing protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1033
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 159/310 (51%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ++L + + ++ V+ ELM +G ++ K +E C++ + ++I
Sbjct: 605 QHGCRYLQKQLENRIPAQIHMIWLEVNQHIVELMMDPFGNYLCQKLVEFCSDEERTVLIQ 664
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ V +P + ++ AL+ L+ G+ VI
Sbjct: 665 NAAPE---MVRIALNQHGTRALQKMIEHVT-TPAQVNLIVEALRHQVVELIQDLNGNHVI 720
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A ++C+ + H GC L ID+ G+++ ++ I+ +A
Sbjct: 721 QKCLNKLSATDASFIFDAVGKNCVEVGTHRHGCCVLQRCIDHADGAQKVWLIECITAHAV 780
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++++L + + + +G + LS K S VV+K L+ + A
Sbjct: 781 TLVQDPFGNYVVQYIIDLNEETFTEPLVNQFKGRIISLSKHKFSSNVVEKCLRCASDAAR 840
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV ELL ++ ++ D + NYVIQTAL ++ RLV ++ L ++R
Sbjct: 841 DMIVNELLTPGEMERLLRDSFANYVIQTALDYATA----NMKPRLVEAIRPSLPSIRATP 896
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 897 YG--RRIQAK 904
>gi|403414617|emb|CCM01317.1| predicted protein [Fibroporia radiculosa]
Length = 1053
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 96/336 (28%), Positives = 155/336 (46%), Gaps = 39/336 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G D +F +LM+ +G ++ K +E + Q +I
Sbjct: 598 QHGCRYLQKKLEEGVPEHRDMIFRETFSHFADLMTDPFGNYLCQKLLEYSTDDQRNVICE 657
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV-----AQSPPLLYH----------------- 98
+ Q + S++ G+ +V+K+I + A P +H
Sbjct: 658 SVA---QDLVNISLNMHGTRAVQKMIDFLSTRRQASLVPARFHYIAYRDGQTDLKYNAQI 714
Query: 99 --VMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINL 156
++ AL L+ G+ VI KCL N FIY A +C+ +A H GC L
Sbjct: 715 HSIILALSLHVVVLIKDLNGNHVIQKCLNKLAPEDNQFIYNAVAANCVEVATHRHGCCVL 774
Query: 157 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+D+ +R Q+++ I+ NA +L + GNYVVQ++L+L D DA+ G+
Sbjct: 775 QRCVDHASDIQRVQLVNEITYNALTLVQDPYGNYVVQYILDLNDNRFSDAVIRQFTGNVC 834
Query: 217 DLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQ 274
LS+ K S V++K ++ + ++ ELLN ++ ++ D YGNY +QTAL
Sbjct: 835 ALSVQKFSSNVIEKCVRVAEHSTRKMLIGELLNRTRLEKLLRDSYGNYCVQTAL------ 888
Query: 275 DRLSVHQR--LVTKLQQHLAALRVMKYGSNKEIQKK 308
D QR LV ++ L +R YG K IQ K
Sbjct: 889 DYAEPSQRALLVEGIRPVLPLIRNTPYG--KRIQNK 922
>gi|293332512|ref|NP_001169625.1| uncharacterized protein LOC100383506 [Zea mays]
gi|224030501|gb|ACN34326.1| unknown [Zea mays]
gi|414865276|tpg|DAA43833.1| TPA: hypothetical protein ZEAMMB73_925464 [Zea mays]
Length = 694
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 149/301 (49%), Gaps = 12/301 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+K G + D +F + +LM G ++ + +E C+E Q IIL
Sbjct: 387 KNGCRYLQDKFLEGKHHV-DAIFEGIINHIADLMISSAGNYLVQEMVEVCDEGQRLRIIL 445
Query: 61 KITFQDQLFLLA-SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+T QD + ++A S++ G+ V++LI+ V S L+ ++SAL+ F L+ G+ V
Sbjct: 446 ALT-QDPVKMIAISLNTHGTRVVQRLIEKVT-SRELIILIISALQPGFMLLVNDPNGTHV 503
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I KCL N FI++ A + +A GC L I +G + ++ I +
Sbjct: 504 IQKCLANFGAEDNKFIFEGAAANYFNMAVQRHGCCVLQKCISTARGRYQANLIVKICAHG 563
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNA 237
L++ GNYVVQHVL + P+ + G Y+ LS K S VVQ+ +++ +A
Sbjct: 564 FELAQDIFGNYVVQHVLKQKIPYANARLASLFEGKYIYLSKQKVSSNVVQRCIEFFPDDA 623
Query: 238 VHYIVEE--LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
IV E LL Q+ +D Y NYVI TAL T R + LV ++ H A+R
Sbjct: 624 KAVIVHEFLLLRGSHFEQLVTDPYANYVINTALNNT----RGHLLNALVEAIRPHEDAIR 679
Query: 296 V 296
Sbjct: 680 T 680
>gi|186511600|ref|NP_192624.2| pumilio 11 [Arabidopsis thaliana]
gi|313471422|sp|Q9LDW3.2|PUM11_ARATH RecName: Full=Pumilio homolog 11; Short=APUM-11; Short=AtPUM11
gi|332657281|gb|AEE82681.1| pumilio 11 [Arabidopsis thaliana]
Length = 556
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G+ + +F V EL + +G ++ K IE CNE Q I++++
Sbjct: 255 GCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRL 314
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + L + S++ +G+ V+KLI+ V + V SAL F L G+ VIL
Sbjct: 315 TSKPGLLVKISINNYGTRVVQKLIETVTTKEQISL-VKSALVPGFLSLFRELNGNHVILN 373
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ + N FI +AA + C+ +A GC L + G + ++++ IS N+ L
Sbjct: 374 CLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLL 433
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-YQNAVHYI 241
++ GNY+VQ++ +E + F LRG+YV L+ K GS VV+K L+ Y + I
Sbjct: 434 AQDPFGNYLVQYI--IEKKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQI 491
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVET 271
V EL++ + D Y NYVIQ AL +T
Sbjct: 492 VNELVSVLNFGYLLQDPYANYVIQCALSKT 521
>gi|406699075|gb|EKD02294.1| RNA-binding protein of the pumilio family [Trichosporon asahii var.
asahii CBS 8904]
Length = 943
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 21/314 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL GD D +F G ELM +G ++ K +E E Q + II
Sbjct: 441 QHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATEEQRSAIID 500
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ--SPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + S++ G+ +V+K++ +AQ P + ++ AL L+ G+
Sbjct: 501 SVSND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIKDLNGNH 557
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A + + +A H GC L ID+ ++R Q++ I N
Sbjct: 558 VIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLVTEIIFN 617
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYV+Q++L+L D + + G+ L S VV+K ++ +
Sbjct: 618 SLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVEKCIRVADPE 673
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
+V E+LN ++ ++ D YGNYVIQT L D + QR LV ++ L ++
Sbjct: 674 IRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVECIRPILPSI 727
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 728 RNTPYG--KRIQSK 739
>gi|401889099|gb|EJT53039.1| hypothetical protein A1Q1_00046 [Trichosporon asahii var. asahii
CBS 2479]
Length = 943
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 21/314 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL GD D +F G ELM +G ++ K +E E Q + II
Sbjct: 441 QHGCRYLQKKLEEGDPAHRDMIFRETYGHFPELMIDPFGNYLCQKLLEHATEEQRSAIID 500
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ--SPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + S++ G+ +V+K++ +AQ P + ++ AL L+ G+
Sbjct: 501 SVSND---LVGISLNMHGTRAVQKMVDFLAQPRQPKQIRTLIYALSVNVVALIKDLNGNH 557
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL N FIY A + + +A H GC L ID+ ++R Q++ I N
Sbjct: 558 VIQKCLNKLIPEDNQFIYNAIATNLIEVATHRHGCCVLQRSIDHASPAQRLQLVTEIIFN 617
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L + GNYV+Q++L+L D + + G+ L S VV+K ++ +
Sbjct: 618 SLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSL----FSSNVVEKCIRVADPE 673
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAAL 294
+V E+LN ++ ++ D YGNYVIQT L D + QR LV ++ L ++
Sbjct: 674 IRKVLVAEVLNRSRLEKLLRDSYGNYVIQTIL------DYCEIGQRMVLVECIRPILPSI 727
Query: 295 RVMKYGSNKEIQKK 308
R YG K IQ K
Sbjct: 728 RNTPYG--KRIQSK 739
>gi|402076055|gb|EJT71478.1| RNA-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1066
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 157/310 (50%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ++L + + ++ + ELM+ +G ++ K +E CNE + ++I
Sbjct: 619 QHGCRYLQKQLENRQPEHVHMIWLETNQHVVELMTDPFGNYLCQKLLEYCNEEERTVLIQ 678
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ QD + + ++++ G+ +++K+I+ + + + S R+ + L+ G+ VI
Sbjct: 679 NAS-QDMVRI--ALNQHGTRALQKMIEFINTDEQVQIIIESLRNRVVE-LIQDLNGNHVI 734
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ FI+ A + + + H GC L ID+ G ++ ++ I+ +A
Sbjct: 735 QKCLNKLNCTQSQFIFDAVGKSAIDVGTHRHGCCVLQRCIDHASGDQKVWLIQRITEHAV 794
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++++L +P + + RG LS K S V++K L+ +
Sbjct: 795 ALVQDPFGNYVVQYIIDLNEPSFTEPLVGMFRGRISALSRHKFSSNVIEKCLRCAQDGSK 854
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I EE+L +I ++ D + NYVIQTAL + + RLV ++ L +R
Sbjct: 855 DMIAEEILAPGEIERLLRDSFANYVIQTALEYSTHYTK----HRLVDAIRPILPNIRATP 910
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 911 YG--RRIQAK 918
>gi|255555215|ref|XP_002518644.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
gi|223542025|gb|EEF43569.1| Pumilio domain-containing protein C6G9.14, putative [Ricinus
communis]
Length = 644
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 154/306 (50%), Gaps = 13/306 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++G ++LQ+K+ + +F V ++L+ Q+ ++ K +CN Q+ ++L
Sbjct: 324 QDGCRFLQKKVEELIPEQTEMIFLEVKDHLYDLIVDQFANYLVQKLFLACNGVQINQLLL 383
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + G+ +++K+I+++ P ++SAL + +L G VI
Sbjct: 384 SLVQNGERLKNICIHMHGTRAMQKIIEIINNYPEQKASLVSALGNITVYLAKNHNGHHVI 443
Query: 121 ---LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
LKC E Y ++ + C+ +A + GC L +D+ G ++ + I+
Sbjct: 444 QQCLKCFEVEYT---QYLLAEIAQSCIEIARDKSGCCVLQKALDSSYGELKECFITTITA 500
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA+ LS GNYVVQ+VL + P I LRG +V+LS+ K GS VV+K LK N
Sbjct: 501 NASVLSVDPYGNYVVQYVLQMHIPHAEATILEQLRGQFVNLSMDKFGSNVVEKCLKECNE 560
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV----TKLQQHL 291
++ IV+EL +S IL+V +GNYV Q+AL E +D +R++ +L HL
Sbjct: 561 INAAGIVQELADSPSILRVLQHPFGNYVAQSAL-EVAPEDLYQYLERVIIFFERELHSHL 619
Query: 292 AALRVM 297
+V+
Sbjct: 620 HGKKVL 625
>gi|7267527|emb|CAB78009.1| putative protein [Arabidopsis thaliana]
gi|7321073|emb|CAB82120.1| putative protein [Arabidopsis thaliana]
Length = 524
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 141/270 (52%), Gaps = 4/270 (1%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G+ + +F V EL + +G ++ K IE CNE Q I++++
Sbjct: 255 GCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQRTQILIRL 314
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + L + S++ +G+ V+KLI+ V + V SAL F L G+ VIL
Sbjct: 315 TSKPGLLVKISINNYGTRVVQKLIETVTTKEQISL-VKSALVPGFLSLFRELNGNHVILN 373
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ + N FI +AA + C+ +A GC L + G + ++++ IS N+ L
Sbjct: 374 CLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRNSLLL 433
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-YQNAVHYI 241
++ GNY+VQ++ +E + F LRG+YV L+ K GS VV+K L+ Y + I
Sbjct: 434 AQDPFGNYLVQYI--IEKKVGGVNVLFELRGNYVKLATQKFGSHVVEKCLRYYPESRSQI 491
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVET 271
V EL++ + D Y NYVIQ AL +T
Sbjct: 492 VNELVSVLNFGYLLQDPYANYVIQCALSKT 521
>gi|453088007|gb|EMF16048.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 1055
Score = 117 bits (293), Expect = 6e-24, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 140/270 (51%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL + + + +F V ELM +G ++ K +ES N++Q ++I
Sbjct: 639 QHGCRFLQRKLEERNEKTVQVIFDEVKEHMIELMVDPFGNYLCQKLLESANDNQRTILIE 698
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + ++ AL L+ G+ VI
Sbjct: 699 NASPS---MTKIALNQHGTRALQKMIEYIS-TPEQIQLIVKALGNDVVVLIQDLNGNHVI 754
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI++A HC+ + H GC L ID+ G ++ Q++ + NA
Sbjct: 755 QKCLNHLSSIDASFIFEAVGAHCITVGTHRHGCCVLQRCIDHADGLQKGQMVDHVIRNAY 814
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C A G LS K S V++K ++ +
Sbjct: 815 ALVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEVPALSRQKFSSNVIEKCIRCSSNETR 874
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
++ EL+ + ++ D + NYV+QTA+
Sbjct: 875 RELIRELMVPQVLEKLLRDGFANYVVQTAM 904
>gi|12324246|gb|AAG52093.1|AC012680_4 putative RNA-binding protein; 42664-44784 [Arabidopsis thaliana]
Length = 626
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 2/272 (0%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G S +F V ELM +G ++ K ++ C E Q I+L
Sbjct: 345 QHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQRTQIVL 404
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + S++ +G+ V++L++ + +S + V AL+ F L+ G+ VI
Sbjct: 405 VATEEPGQLIRISLNAYGTRVVQRLVETI-RSGKQISLVKLALRPGFLDLIKDLNGNHVI 463
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA + C +A H GC L I +R++++ IS N+
Sbjct: 464 QRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQREKLIAEISRNSL 523
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNY VQ V+ L P + + L+GHYV LS+ K S +V++ L + +
Sbjct: 524 LLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVERCLMHCPESRP 583
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVET 271
IV EL++ Q+ D Y N+VIQ AL T
Sbjct: 584 QIVRELVSVPHFDQLLQDPYANFVIQAALAAT 615
>gi|15242461|ref|NP_196523.1| pumilio 21 [Arabidopsis thaliana]
gi|75264321|sp|Q9LXC5.1|PUM21_ARATH RecName: Full=Putative pumilio homolog 21; Short=APUM-21;
Short=AtPUM21
gi|7671428|emb|CAB89369.1| putative protein [Arabidopsis thaliana]
gi|9758989|dbj|BAB09516.1| unnamed protein product [Arabidopsis thaliana]
gi|332004034|gb|AED91417.1| pumilio 21 [Arabidopsis thaliana]
Length = 517
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 135/248 (54%), Gaps = 4/248 (1%)
Query: 52 ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM 111
ES L I +T ++FL + +++GS +++ L + +SP L + + A+ F LM
Sbjct: 246 ESHLFKIGSALTTTKRIFLHLATNQYGSQALRILFR---RSPSLDHLLFCAVDTNFFLLM 302
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
K G +I+ + K + +Y+ E+ L+LA E GC+ LNN + ++G R I
Sbjct: 303 SDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQEIRGIYRDLI 362
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ NA LS G +VVQ++L L++P AI LRG + L++ + GS+VV+K
Sbjct: 363 FECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAMERQGSYVVEKC 422
Query: 232 LKYQNAVHYIVEELL-NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
LK A ++EE N+ + +++ +DK+GN+V+Q+AL ++ + + V KL+ H
Sbjct: 423 LKSDFARDQVLEEFRGNAKEWVRMTTDKFGNFVVQSALRVMKEKEMRPLLREFVEKLRPH 482
Query: 291 LAALRVMK 298
+ + +
Sbjct: 483 FGKMEIGR 490
>gi|171689290|ref|XP_001909585.1| hypothetical protein [Podospora anserina S mat+]
gi|170944607|emb|CAP70718.1| unnamed protein product [Podospora anserina S mat+]
Length = 700
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 158/303 (52%), Gaps = 11/303 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L + + ++ V ELM +G ++ K +E C + + +I
Sbjct: 297 QHGCRFLQKQLENRIPHEVHAIYREVLPHVHELMIDPFGNYLCQKLLEYCTDDERTELI- 355
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K + +D + + ++++ G+ +++K+I+ V+ + + ALK L+ G+ VI
Sbjct: 356 KNSAKDMVPI--ALNQHGTRALQKMIEHVSNEV-QIQMITDALKMQVVTLIQDLNGNHVI 412
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL ++ FI+ A E+C+ + H GC L ID+ G ++ ++ I+ NA
Sbjct: 413 QKCLNKLSPEQSHFIFNAVGENCIDVGTHRHGCCVLQRCIDHANGQQKAWLIQCITNNAY 472
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
L + GNYV+Q++++L +P + + R H + LS K S VV+K L+ + +
Sbjct: 473 RLVQDPFGNYVIQYIIDLNEPSFTEPLVAQFRTHILTLSKLKFSSNVVEKCLRCSSEQSK 532
Query: 239 HYIVEELLNS-DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
+ IV ELL++ +I + D Y NYV QTAL + QRLV ++ HLA++R
Sbjct: 533 NMIVSELLDAGSEIERCLRDSYANYVYQTALDHGTN----DMKQRLVDLIRPHLASIRNT 588
Query: 298 KYG 300
YG
Sbjct: 589 PYG 591
>gi|327300785|ref|XP_003235085.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
gi|326462437|gb|EGD87890.1| pumilio-family RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 1049
Score = 117 bits (292), Expect = 9e-24, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 635 QHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 693
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V+ AL L+ G+ VI
Sbjct: 694 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHVI 750
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 751 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 810
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
SL + GNYV+Q++L+L +P +C +G LS K S V++K ++ N
Sbjct: 811 SLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMR 870
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
++E+L+ ++ + D + NYVIQTA+
Sbjct: 871 RAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|302505595|ref|XP_003014504.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
gi|291178325|gb|EFE34115.1| RNA-binding protein, putative [Arthroderma benhamiae CBS 112371]
Length = 1094
Score = 117 bits (292), Expect = 9e-24, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 680 QHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 738
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V+ AL L+ G+ VI
Sbjct: 739 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHVI 795
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 796 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 855
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
SL + GNYV+Q++L+L +P +C +G LS K S V++K ++ N
Sbjct: 856 SLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMR 915
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
++E+L+ ++ + D + NYVIQTA+
Sbjct: 916 RAFIKEMLSPHELPNMLRDSFANYVIQTAM 945
>gi|356510185|ref|XP_003523820.1| PREDICTED: uncharacterized protein LOC100784921 [Glycine max]
Length = 653
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 152/300 (50%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G + + +F + G ELM +G ++ K ++ C + QL I+L
Sbjct: 348 QNGCRFLQRMVDEGTYQDICIVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDDQLLQIVL 407
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + S++ G+ V+KLI+ + S + V SA++ F L+ G+ VI
Sbjct: 408 LLTNHPTQLVRISLNTHGTRVVQKLIETLT-SDEQVSLVKSAIQPGFLDLIKDLNGNHVI 466
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA++ C+ +A H GC L I + G R +++ I +
Sbjct: 467 QRCLQCFSCQDNQFIFDAAVKFCVEIATHRHGCCVLQCCIHHSTGKNRDKLVTEICKHGL 526
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNYVVQ+V+ + P + + +G +V LS K S VV+K LK+ N+
Sbjct: 527 LLAQDAFGNYVVQYVIESDTPAVSVKLLSQFKGSFVILSTQKFSSHVVEKCLKHIGNSRP 586
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV EL + + Q+ D Y NYVI++AL+ T + +H L ++ H LR Y
Sbjct: 587 RIVGELTSVPRFEQLLQDPYANYVIRSALLFT----KGPLHASLAEIVRAH-KGLRTSPY 641
>gi|297796981|ref|XP_002866375.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
gi|297312210|gb|EFH42634.1| APUM18 [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 141/275 (51%), Gaps = 7/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ F + I +++ L + +T F+ +K+GS V+KL+
Sbjct: 46 FNLMTDGEAVSYFREMISKSDKTVLQRMASLLTSDSDYFMAIVTNKYGSRRVQKLL---G 102
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+S + +A+ R F + K S V ++ + +Y+ L H L +AC +
Sbjct: 103 KSDEVDAFFCAAILRRFLHITTDKYASYVTIRGMVVFDKEMKKPMYEHILYHALDIACDQ 162
Query: 151 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I + R Q+L L++ NA LS SGN+VVQHVL L + I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLDLVASNALCLSNDASGNFVVQHVLTLYELRCIHNIAV 222
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L GH +DLS K GS++V+K L+ + ++ +V ELL + D ++++A +++GN+V+ A
Sbjct: 223 NLFGHCIDLSFKKYGSYIVEKLLEAEESMLVVVVELLDCDGDTLMRLARNEFGNFVVVKA 282
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T ++ + LV KL + LR +GSN
Sbjct: 283 LRFTKAMSKIDLFWGLVQKLMPFIHLLR-RSHGSN 316
>gi|358378205|gb|EHK15887.1| hypothetical protein TRIVIDRAFT_164108, partial [Trichoderma virens
Gv29-8]
Length = 751
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 162/312 (51%), Gaps = 18/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 335 QHGCRYLQKKLEEREGDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 394
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ +D + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 395 NAS-KDMVRI--ALNQHGTRALQKMIEYVS-TPQQVHLIIEALRFRVVELIQDLNGNHVI 450
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 451 QKCLNKLTASDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHATGQQKLWLIQRITEHAR 510
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + GNYVVQ++++L +P + I +G LS K S V++K L+ A
Sbjct: 511 ILVQDPFGNYVVQYIIDLNEPTFTEPIVATFQGCISQLSRHKFSSNVIEKCLRCAQAPSK 570
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ--RLVTKLQQHLAALRV 296
IVEE+LN ++ + D + NYVIQTAL D + HQ RLV ++ L +R
Sbjct: 571 DMIVEEILN--EMERFLRDSFANYVIQTAL------DFSTPHQKYRLVEAIRPILPQVRT 622
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 623 TPYG--RRIQAK 632
>gi|326479871|gb|EGE03881.1| RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 1049
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 635 QHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 693
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V+ AL L+ G+ VI
Sbjct: 694 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHVI 750
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 751 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 810
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
SL + GNYV+Q++L+L +P +C +G LS K S V++K ++ N
Sbjct: 811 SLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMR 870
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
++E+L+ ++ + D + NYVIQTA+
Sbjct: 871 RAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|326468643|gb|EGD92652.1| RNA-binding protein [Trichophyton tonsurans CBS 112818]
Length = 1049
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 635 QHGCRYLQRKLEEGVPEHVQIIFRETQIHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 693
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V+ AL L+ G+ VI
Sbjct: 694 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHVI 750
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 751 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 810
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
SL + GNYV+Q++L+L +P +C +G LS K S V++K ++ N
Sbjct: 811 SLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNMR 870
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
++E+L+ ++ + D + NYVIQTA+
Sbjct: 871 RAFIKEMLSPHELPNMLRDSFANYVIQTAM 900
>gi|392865282|gb|EAS31064.2| RNA-binding protein [Coccidioides immitis RS]
Length = 1023
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 613 QHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 672
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 673 NAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQDLNGNHVI 728
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A C+ + H GC L ID+ G +R Q++ I+ ++
Sbjct: 729 QKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQITASSY 788
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C G LS K S V++K L+ + +
Sbjct: 789 TLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLRTADFQSR 848
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L +++ ++ D + NYV+QTA+ + R++ L+ ++ L ++R
Sbjct: 849 RLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPILPSIRQTP 904
Query: 299 YG 300
+G
Sbjct: 905 HG 906
>gi|320040960|gb|EFW22893.1| RNA-binding protein [Coccidioides posadasii str. Silveira]
Length = 1023
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 613 QHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 672
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 673 NAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQDLNGNHVI 728
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A C+ + H GC L ID+ G +R Q++ I+ ++
Sbjct: 729 QKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQITASSY 788
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C G LS K S V++K L+ + +
Sbjct: 789 TLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLRTADFQSR 848
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L +++ ++ D + NYV+QTA+ + R++ L+ ++ L ++R
Sbjct: 849 RLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPILPSIRQTP 904
Query: 299 YG 300
+G
Sbjct: 905 HG 906
>gi|303319247|ref|XP_003069623.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240109309|gb|EER27478.1| Pumilio-family RNA binding repeat containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1003
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 593 QHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 652
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 653 NAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQDLNGNHVI 708
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A C+ + H GC L ID+ G +R Q++ I+ ++
Sbjct: 709 QKCLNRLSAADAQFIYDAVGASCIAVGTHRHGCCVLQRCIDHASGDQRAQLIAQITASSY 768
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C G LS K S V++K L+ + +
Sbjct: 769 TLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLRTADFQSR 828
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L +++ ++ D + NYV+QTA+ + R++ L+ ++ L ++R
Sbjct: 829 RLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPILPSIRQTP 884
Query: 299 YG 300
+G
Sbjct: 885 HG 886
>gi|224136880|ref|XP_002326968.1| predicted protein [Populus trichocarpa]
gi|222835283|gb|EEE73718.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 7/300 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ+ + S +D LF+ V G+ L+ +G +V K +E +E Q I+ +
Sbjct: 199 GCKFLQKLIESATREQIDMLFYEVIGYVGGLIVDPFGNYVVQKLVEVLSEEQRTGILRML 258
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T D + +D G+ V+KL+ + +P + V+SAL + L+ G VI
Sbjct: 259 TRTDFQLVRICLDVHGTRVVQKLLNCIT-NPQQVSIVVSALSQGAVALITDSNGHHVIQH 317
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
+ N +I + E+C +A ++ GC L ++ +G R ++L I NA L
Sbjct: 318 FFKHFSTEDNKYILKQVAENCFGIATNKSGCCVLQRCVEYSEGEARDRLLAEIIANALLL 377
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KYQNAVHY 240
+ GNYVVQH+L L+ P + + + +G Y+ LS K GS VV+ L +
Sbjct: 378 AEDHYGNYVVQHILKLKSPEITENLLAQFKGSYMALSCNKYGSNVVESCLLTTREEQSTQ 437
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
I+ ELL + + + D +GN+VIQ AL + Q V + LV +Q++ +R YG
Sbjct: 438 IILELLRNPLVSMLLVDPFGNFVIQKALSISQGQ----VQRYLVALIQRNAQKMRSNIYG 493
>gi|290985728|ref|XP_002675577.1| predicted protein [Naegleria gruberi]
gi|284089174|gb|EFC42833.1| predicted protein [Naegleria gruberi]
Length = 737
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 141/268 (52%), Gaps = 7/268 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ+K++ G+ + L +F + ELM+ +G ++ K +E C LII +
Sbjct: 421 GCRFLQKKITDGE-QGLQMVFDEIYDHIVELMTDPFGNYLCQKLVEHCTNEHKTLIIRAV 479
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + + S++ G+ +V+KLI+ + + ++ ALK L+ G+ VI +
Sbjct: 480 S---KDLINISMNMHGTRAVQKLIECLTTQD-QIGEIIEALKDSVVPLIKDLNGNHVIQR 535
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ FIY A C+ +A H+ GC L ID+ S+R ++ + NA +L
Sbjct: 536 CLQQLIPENKQFIYNAVAGRCVEVATHKHGCCVLQRCIDHAAESQRMMLIKEVIANAHTL 595
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
++ GNYVVQ+VL+L D + + I G LS+ K S V++K L+ +N +
Sbjct: 596 IQNPFGNYVVQYVLDLGDDSINEKIIARFYGSIASLSINKFSSNVIEKCLRIGNENVKNT 655
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTAL 268
++EE+L + + D +GNYV+QTA+
Sbjct: 656 MIEEVLEDRNLSALLQDSFGNYVVQTAI 683
>gi|350638129|gb|EHA26485.1| hypothetical protein ASPNIDRAFT_55402 [Aspergillus niger ATCC 1015]
Length = 1507
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 601 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRTDLIN 660
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ + V+ +L+ L+ G+ VI
Sbjct: 661 NAAHQ---LVKIALNQHGTRALQKMIEFISTAEQT-QTVIHSLEDHVVELVQDLNGNHVI 716
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G ++ +++ I+ NA
Sbjct: 717 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 776
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 777 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQIR 836
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 837 RQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETR----ARIVDCIRPILPSIRQTP 892
Query: 299 YG 300
+G
Sbjct: 893 HG 894
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI 241
L + + G +Q L +P + I R H V+L G+++ QK L+Y N
Sbjct: 597 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 656
Query: 242 VEELLN--SDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHLAALRVM 297
+L+N + Q++++A +++G +Q + + T Q + +H L+ H+ L V
Sbjct: 657 --DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHS-----LEDHVVEL-VQ 708
Query: 298 KYGSNKEIQK 307
N IQK
Sbjct: 709 DLNGNHVIQK 718
>gi|317025399|ref|XP_001388993.2| RNA-binding protein [Aspergillus niger CBS 513.88]
Length = 1000
Score = 116 bits (290), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 601 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRTDLIN 660
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ + V+ +L+ L+ G+ VI
Sbjct: 661 NAAHQ---LVKIALNQHGTRALQKMIEFISTAEQT-QTVIHSLEDHVVELVQDLNGNHVI 716
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G ++ +++ I+ NA
Sbjct: 717 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 776
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 777 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQIR 836
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 837 RQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETR----ARIVDCIRPILPSIRQTP 892
Query: 299 YG 300
+G
Sbjct: 893 HG 894
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI 241
L + + G +Q L +P + I R H V+L G+++ QK L+Y N
Sbjct: 597 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 656
Query: 242 VEELLN--SDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHLAALRVM 297
+L+N + Q++++A +++G +Q + + T Q + +H L+ H+ L V
Sbjct: 657 --DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHS-----LEDHVVEL-VQ 708
Query: 298 KYGSNKEIQK 307
N IQK
Sbjct: 709 DLNGNHVIQK 718
>gi|358366888|dbj|GAA83508.1| RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 1002
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 603 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRTDLIN 662
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ + V+ +L+ L+ G+ VI
Sbjct: 663 NAAHQ---LVKIALNQHGTRALQKMIEFISTAEQT-QTVIHSLEDHVVELVQDLNGNHVI 718
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G ++ +++ I+ NA
Sbjct: 719 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 778
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 779 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQIR 838
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 839 RQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETR----ARIVDCIRPILPSIRQTP 894
Query: 299 YG 300
+G
Sbjct: 895 HG 896
Score = 37.7 bits (86), Expect = 6.4, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI 241
L + + G +Q L +P + I R H V+L G+++ QK L+Y N
Sbjct: 599 LCKDQHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRT 658
Query: 242 VEELLN--SDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHLAALRVM 297
+L+N + Q++++A +++G +Q + + T Q + +H L+ H+ L V
Sbjct: 659 --DLINNAAHQLVKIALNQHGTRALQKMIEFISTAEQTQTVIHS-----LEDHVVEL-VQ 710
Query: 298 KYGSNKEIQK 307
N IQK
Sbjct: 711 DLNGNHVIQK 720
>gi|425771288|gb|EKV09735.1| hypothetical protein PDIP_63380 [Penicillium digitatum Pd1]
gi|425776819|gb|EKV15020.1| hypothetical protein PDIG_28960 [Penicillium digitatum PHI26]
Length = 1020
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 80/304 (26%), Positives = 155/304 (50%), Gaps = 14/304 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 613 QHGCRYLQRKLEERNQEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSNDEQRTALIN 672
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI
Sbjct: 673 NAAPE---LVKIALNQHGTRALQKMIEFIS-TPQQTQTVINALQYHVVDLVQDLNGNHVI 728
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL +FIY+A +C+ + H GC L ID+ G ++ +++ I+ ++
Sbjct: 729 QKCLNRLSPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASGHQKARLISQITSHSF 788
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
+L + GNYVVQ++L+L +P + +C G+ LS K S V++K L+ A +Y
Sbjct: 789 ALVQDPFGNYVVQYILDLAEPSFTNPLCATFGGNIPQLSKQKFSSNVIEKCLR--TADNY 846
Query: 241 ----IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+++E L +++ ++ D + NYV+QTA M L R+V ++ L ++R
Sbjct: 847 MKREMIDEFLMGNELEKMLRDSFANYVVQTA----MDFCDLETRNRIVEAVRPILPSIRQ 902
Query: 297 MKYG 300
+G
Sbjct: 903 TPHG 906
>gi|357489613|ref|XP_003615094.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516429|gb|AES98052.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 712
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 149/300 (49%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G ++ +F V ELM +G ++ K +E C + Q I+L
Sbjct: 407 QNGGRFLQGMVEKGTVEDMEMVFNGVIDNVVELMMDPFGNYLVQKLLEFCRDDQRLQIVL 466
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + S + G+ SV+KLI + +S + V SA+ F L+ G+ VI
Sbjct: 467 MLTKVPGQLVRTSFNTHGTRSVQKLISTL-KSRRQIALVRSAILPGFLDLVKDLNGNHVI 525
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL N+FI+ AA + +A H+ GC L ID KG ++++ I +
Sbjct: 526 QRCLSCWSVQDNEFIFDAATKFLTDVATHQHGCCVLQRCIDFSKGKSLEKLVKEICKHGF 585
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
SL++ GNYV+Q+++ L+ P + + +G+YV LS K S VV+K L Y
Sbjct: 586 SLAQDPYGNYVIQYIIELQIPSAMAKLTPQFKGNYVILSTQKFSSHVVEKCLIYIVETRA 645
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV+ELL+ ++ D Y NYV+Q AL T + S+H LV ++ H LR Y
Sbjct: 646 RIVQELLSVPHFERLLQDPYANYVVQKALEYT----KGSLHASLVEAVRAH-KILRTSPY 700
>gi|358396949|gb|EHK46324.1| hypothetical protein TRIATDRAFT_153608 [Trichoderma atroviride IMI
206040]
Length = 757
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 161/314 (51%), Gaps = 18/314 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL +S + ++ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 335 QHGCRYLQKKLEERNSDQVHMIWLETNQHVIELMTDPFGNYLCQKLLEFCNDDERTVLIQ 394
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 395 NAS---QRMEDIALNQHGTRALQKMIEYVS-TPQQIHLIIEALRNRVVKLIKDLNGNHVI 450
Query: 121 LKCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
KCL FI+ A + C+ + H GC L ID+ G ++ ++ I+ +
Sbjct: 451 QKCLNKLTATDAQFIFDAVGNGDKCVEVGTHRHGCCVLQRCIDHATGEQKLWLIQRITEH 510
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L + GNYVVQ++++L +P + I +G LS K S V++K L+ A
Sbjct: 511 ARILVQDPFGNYVVQYIIDLNEPTFTEPIVGMFQGCIAQLSRHKFSSNVIEKCLRCAQAP 570
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ--RLVTKLQQHLAAL 294
IVEELL+ ++ ++ D + NYVIQTAL + + HQ RLV ++ L +
Sbjct: 571 SKDMIVEELLSQPEMERLLRDSFANYVIQTAL------EFSTPHQKYRLVEAIRPILPQI 624
Query: 295 RVMKYGSNKEIQKK 308
R +G + IQ K
Sbjct: 625 RTTPHG--RRIQAK 636
>gi|125536693|gb|EAY83181.1| hypothetical protein OsI_38391 [Oryza sativa Indica Group]
Length = 503
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 149/292 (51%), Gaps = 8/292 (2%)
Query: 10 KLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLF 69
+L G R +D +F V+ ELM +G ++ K + C++ Q I+L +T +
Sbjct: 206 RLDDG-KREVDFIFAGVARHAVELMVNPFGNYLMQKLLAVCDDEQRMAIVLTLTKDPFVL 264
Query: 70 LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYN 129
+ S++ G+ +V+KLI+ + ++ + V+ AL+ F L+ G+ V+ +CL+
Sbjct: 265 VRISLNVHGTRAVQKLIESL-RTREEIQLVVEALRPGFLELIKDPNGNHVVQRCLQSFDA 323
Query: 130 HKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGN 189
+ N I++AA HCL + GC L I G +R++++ I+ N L++ GN
Sbjct: 324 NDNKPIFEAAAVHCLDIGMQCHGCCVLQRCIARSGGEQREKLVAAIASNGFELAQDAYGN 383
Query: 190 YVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLN 247
YVVQ+V++L+ P ++ +G Y+ LS+ K S VV+K LK + I+ ELL
Sbjct: 384 YVVQYVIDLKVPTANASLTKQFQGRYIHLSMQKFSSNVVEKCLKVFKEADKATIILELLA 443
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
Q+ + NYVI +A+ + + S+H L ++ H+ LR Y
Sbjct: 444 VPHFEQLLQHPFANYVIYSAI----QNSKGSLHSALTNAIRPHVELLRTSPY 491
>gi|255950610|ref|XP_002566072.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593089|emb|CAP99465.1| Pc22g21770 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1018
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 79/309 (25%), Positives = 152/309 (49%), Gaps = 24/309 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 611 QHGCRYLQRKLEERNPEHVQLIFSETYMHVIELMTDPFGNYLCQKLLEYSNDEQRTALID 670
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP-------PLLYHVMSALKRLFKFLMMT 113
+ + ++++ G+ +++K+I+ ++ S L YHV+ ++ L
Sbjct: 671 NAAPE---LVKIALNQHGTRALQKMIEFISTSKQTQTVINALQYHVVDLVQDL------- 720
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ VI KCL +FIY+A +C+ + H GC L ID+ G ++ +++
Sbjct: 721 -NGNHVIQKCLNRLTPEDAEFIYEAVGGNCVVVGTHRHGCCVLQRCIDHASGHQKARLIS 779
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I+ ++ +L + GNYVVQ++L+L +P + +C G+ LS K S V++K L+
Sbjct: 780 QITSHSFALVQDPFGNYVVQYILDLAEPSFTNPLCSTFAGNIPQLSKQKFSSNVIEKCLR 839
Query: 234 YQNAV--HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ +++E L +++ ++ D + NYV+QTA M L R+V ++ L
Sbjct: 840 TADNYMKRQMIDEFLAGNELEKMLRDSFANYVVQTA----MDFCDLETRNRIVEAVRPIL 895
Query: 292 AALRVMKYG 300
++R +G
Sbjct: 896 PSIRQTPHG 904
>gi|452986016|gb|EME85772.1| hypothetical protein MYCFIDRAFT_150818 [Pseudocercospora fijiensis
CIRAD86]
Length = 519
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 140/271 (51%), Gaps = 8/271 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ-LALII 59
+ G ++LQ KL + + + +F V ELM +G ++ K +ES N+ Q ALI+
Sbjct: 97 QHGCRFLQRKLEERNEQTVKTIFEEVKDHMIELMVDPFGNYLCQKLLESVNDEQRTALIV 156
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+++ L ++ G+ +++K+I+ + +P ++ AL+ L+ G+ V
Sbjct: 157 NAAPAMNKIAL----NQHGTRALQKMIEYIT-TPEQTQEIIKALRNDVVLLIQDLNGNHV 211
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I KCL + FI++A +C+ + H GC L ID+ G ++ +++ + NA
Sbjct: 212 IQKCLNHLSSIDATFIFEAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVIANA 271
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--A 237
SL + GNYVVQ++L+L +P + +C A G LS K S V++K ++ +
Sbjct: 272 YSLVQDPFGNYVVQYILDLSEPCFTEPLCRAFYGEIPALSRQKFSSNVIEKCIRCASVET 331
Query: 238 VHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
IV E++ + ++ D + NYV+QTA+
Sbjct: 332 RREIVREIMPPQTLEKLLRDGFANYVVQTAM 362
>gi|452845425|gb|EME47358.1| hypothetical protein DOTSEDRAFT_69329 [Dothistroma septosporum
NZE10]
Length = 1038
Score = 114 bits (285), Expect = 5e-23, Method: Composition-based stats.
Identities = 75/287 (26%), Positives = 145/287 (50%), Gaps = 17/287 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL + + + +F V+ +LM +G ++ K +ES N+ Q ++I
Sbjct: 615 QHGCRFLQRKLEERNEKTVQIIFEEVNTHMVDLMVDPFGNYLCQKLLESTNDDQRTVLIQ 674
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++++ G+ +++K+I+ ++ +P ++ AL+ L+ G+ VI
Sbjct: 675 N---AKPAMTKIALNQHGTRALQKMIEYIS-TPEQTALIIDALRNDVVLLIQDLNGNHVI 730
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + FI+ A +C+ + H GC L ID+ G ++ +++ + NA
Sbjct: 731 QKCLNHLSSIDAAFIFHAVGNNCITVGTHRHGCCVLQRCIDHADGLQKGEMVDHVIRNAY 790
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
+L + GNYVVQ++L+L +P + +C A G LS K S V++K ++ +
Sbjct: 791 ALVQDPFGNYVVQYILDLSEPCFTEPLCQAFFGEIPALSRQKFSSNVIEKCIRCSSETTK 850
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTA-----------LVETMRQ 274
+V+E++ + + ++ D + NYV+QTA LVE +RQ
Sbjct: 851 RSLVQEIMPTQVLEKLLRDGFANYVVQTAMDFADPDLKPLLVENVRQ 897
>gi|255538126|ref|XP_002510128.1| RNA binding protein, putative [Ricinus communis]
gi|223550829|gb|EEF52315.1| RNA binding protein, putative [Ricinus communis]
Length = 542
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 150/307 (48%), Gaps = 13/307 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +++ L + +D + + ELM +G +V K +E C+E Q I+L +
Sbjct: 225 GCKLVRKALENVTHEKIDMVLLEIIDSVAELMPHPFGNYVVQKLVEVCSEEQRTRILLAV 284
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL-------LYHVMSALKRLFKFLMMTKP 115
T + + ++ G+ +V+KL++ +A + + + +MSAL L
Sbjct: 285 TKNEVQLVSICLNMHGTRAVQKLLEGIASTQQVSITARQQVSLIMSALSSGAVELAKDMN 344
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G VI CLE N ++ + ++C +A + GC L +D+ G R +++ I
Sbjct: 345 GHHVIKYCLEHFLPEDNKYLLKVVADNCFDIATDKSGCCVLQQCVDHSMGEPRDRLVASI 404
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ A L++ R GNYV+QH+L L +P + + L G++ LS K GS VV+K L
Sbjct: 405 TNIALRLAQDRYGNYVIQHLLGLRNPLITANLFRQLEGYFAVLSCDKFGSNVVEKCLLES 464
Query: 236 NA--VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
A I+ ELL S + D YGN+VIQ+AL + + V ++ ++Q++ A
Sbjct: 465 RAEQCTQIISELLRSPCSSMLLVDPYGNFVIQSAL----KVSKGLVQGAMLELIRQNIPA 520
Query: 294 LRVMKYG 300
+R YG
Sbjct: 521 MRSSIYG 527
>gi|452822083|gb|EME29106.1| serine rich Pumilio family RNA binding domain protein [Galdieria
sulphuraria]
Length = 848
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 15/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL G+ + + ELM +G ++ K E CN Q I+
Sbjct: 538 QHGCRFLQMKLEEGNPAYIAMILAECFDGLPELMVDPFGNYLCQKLFECCNFQQRLSIL- 596
Query: 61 KITFQDQLFLLA--SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
Q+ +LA S++ G+ V+++I+ + + + V +AL LM G+
Sbjct: 597 ----QNTCSVLAQVSMNMHGTRVVQRIIECM-EGEDQISTVCTALTPFASQLMKDVNGNH 651
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI +CL+ N FI+ A + HC+ LA H GC + +D +++Q+ I N
Sbjct: 652 VIQRCLQKVAPTHNQFIFDAVVSHCVELATHRHGCCVIQRCLDYAIPLQKEQVCMEICEN 711
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---Q 235
A +L + GNYVVQ+VL+L++ F I I L GH +LS+ K S VV+K L+ +
Sbjct: 712 AFTLVQDAFGNYVVQYVLDLKNRFYIAKIIAQLAGHLYELSVQKFSSNVVEKCLQQVDPE 771
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
H I E + + + + ++ D YGNYV+Q AL + + +L ++ ++ HL++L+
Sbjct: 772 TRKHLIYELMSDRELLGRLLHDAYGNYVVQRAL-QLAQSPQL---EQFCEIIRPHLSSLK 827
Query: 296 VMKYG 300
YG
Sbjct: 828 STPYG 832
>gi|225459320|ref|XP_002284170.1| PREDICTED: uncharacterized protein LOC100257510 [Vitis vinifera]
Length = 724
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 7/298 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ + +F ELM +G ++ K + CNE Q I+L +
Sbjct: 421 GCRFLQRMFDGATVEDVQLVFNETIKHVVELMMNPFGNYLMQKLFDVCNEDQRMQIVLAL 480
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + + S++ G+ V+KL+ + + V+ AL+ F L G+ V+ +
Sbjct: 481 TEEPGELVRISLNAHGTRVVQKLVMTLKTRQQISLVVL-ALEPYFLDLTKDHHGNHVVQR 539
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CLE F + A ++C+ +A H GC L I G ++++ IS N L
Sbjct: 540 CLEYLSCEDIKFFFYDAAKYCVDIATHRHGCCVLQRCITRSTGKHGEKLVAEISANGLLL 599
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVHYI 241
++ GNYV+Q+++ L+ P I ++ G+YV LS+ K S VV+K LK+ + + I
Sbjct: 600 AQDDFGNYVIQYIIELKIPSAIASLMSQFEGNYVHLSMQKFSSHVVEKCLKHLEESRPRI 659
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
V E L+ Q+ D + NYVIQ+AL T + +H L+ ++ H+ LR Y
Sbjct: 660 VHEFLSVPHFEQLMQDPFANYVIQSALEVT----KGPLHASLIEAVRPHI-ILRTSPY 712
>gi|392579559|gb|EIW72686.1| hypothetical protein TREMEDRAFT_72846 [Tremella mesenterica DSM
1558]
Length = 913
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/318 (30%), Positives = 155/318 (48%), Gaps = 25/318 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL GD+ D +F G ELM+ +G ++ K +E + Q + II
Sbjct: 455 QHGCRYLQRKLEEGDAGHRDMIFLETYGHFPELMTDPFGNYLCQKLLEYSTDEQRSAIID 514
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA------QSPPLLYHVMSALKRLFKFLMMTK 114
+ + S++ G+ +V+K++ ++ Q L+Y + + L K L
Sbjct: 515 SVAND---LVAISLNMHGTRAVQKMVDFLSAPRQAKQIRTLIYALSMNVVALIKDLN--- 568
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI KCL N FIY A + + +A H GC L ID+ ++R Q++
Sbjct: 569 -GNHVIQKCLNKLCPEDNQFIYNAIAANLIEVATHRHGCCVLQRSIDHASPAQRMQLVTE 627
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I N+ L + GNYV+Q++L+L D + + G+ LS+ K S VV+K ++
Sbjct: 628 IIFNSLYLVQDPFGNYVIQYILDLNDARFSEPLIRTFIGNVCSLSVQKFSSNVVEKCIRV 687
Query: 235 QNAV--HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
+ +V E+LN ++ ++ D YGNYVIQT L D + QR LV ++
Sbjct: 688 ADPEVRKSLVSEVLNRSRLEKLLRDSYGNYVIQTIL------DYCELSQRMVLVECIRPI 741
Query: 291 LAALRVMKYGSNKEIQKK 308
L ++R YG K IQ K
Sbjct: 742 LPSIRNTPYG--KRIQSK 757
>gi|389624159|ref|XP_003709733.1| RNA-binding protein [Magnaporthe oryzae 70-15]
gi|351649262|gb|EHA57121.1| RNA-binding protein [Magnaporthe oryzae 70-15]
Length = 1053
Score = 114 bits (284), Expect = 7e-23, Method: Composition-based stats.
Identities = 87/313 (27%), Positives = 159/313 (50%), Gaps = 18/313 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWV-VSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ G +YLQ++L + R+ D+ + W+ + ELM+ +G ++ K +E CNE + +
Sbjct: 604 QHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNEEERTV 660
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
+I + QD + + ++++ G+ +++K+I+ + + + S R+ + L+ G+
Sbjct: 661 LIQNAS-QDMVRI--ALNQHGTRALQKMIEFINTEEQVQIIIESLRDRVVE-LIQDLNGN 716
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI KCL + FI+ A + + H GC L ID+ G ++ ++ I+
Sbjct: 717 HVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITE 776
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A +L + GNYVVQ++++L +P + + RG LS K S V++K L+
Sbjct: 777 HAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSAD 836
Query: 238 VH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
V I EE+L +I ++ D + NYVIQTAL + + RLV ++ L +R
Sbjct: 837 VSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYSTPMTK----HRLVETIRPILPTVR 892
Query: 296 VMKYGSNKEIQKK 308
YG + IQ K
Sbjct: 893 STPYG--RRIQAK 903
>gi|326496705|dbj|BAJ98379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 484
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L G R +D +F V+ +LM +G ++ K + C+E Q I+L
Sbjct: 178 QHGCRFLQQRLDDG-KREVDFIFTGVARHAVDLMVNPFGNYLMQKLLAVCSEEQRMGIVL 236
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + + S++ G+ +V+KLI+ + ++ + V++AL+ F L+ G+ V+
Sbjct: 237 TLTKEPFVLVRISLNVHGTRAVQKLIESL-KAREEIQLVVAALRPGFLELIKDPNGNHVV 295
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ N I+ AA +CL + GC L I G +++++ I+ N
Sbjct: 296 QKCLQSFGADDNKPIFDAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVAAIARNGF 355
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-YQNAVH 239
L++ GNYVVQ+V+ L+ ++ G Y+ LS+ K S VV+K LK ++ A
Sbjct: 356 ELAQDAYGNYVVQYVIELKVAAANASLAQQFEGKYIHLSMQKFSSNVVEKCLKVFKEADK 415
Query: 240 Y-IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ +LL + Q ++ Y NYV+ AL + + S+H L ++ H+ LR
Sbjct: 416 ANIILQLLAAPQFERLLLHPYANYVVYAAL----QNSKGSLHSALTNAIRPHVELLRTSP 471
Query: 299 Y 299
Y
Sbjct: 472 Y 472
>gi|296086803|emb|CBI32952.3| unnamed protein product [Vitis vinifera]
Length = 275
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 135/269 (50%), Gaps = 7/269 (2%)
Query: 34 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP 93
M +G ++ K ++ CNE Q I++ +T + + S++ G+ V+KLI+ + ++
Sbjct: 1 MMNPFGNYLMQKLLDVCNEEQRMQILVMLTEESGELVRISLNTHGTRVVQKLIETL-KTR 59
Query: 94 PLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 153
+ V+SAL+ F L+ G+ VI +CL+ N FI+ AA ++C+ +A H+ GC
Sbjct: 60 QQISRVISALEPGFLALIKDLNGNHVIQRCLQCLSKEDNKFIFVAAAKYCVEIATHQHGC 119
Query: 154 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRG 213
L I + G R+ ++ IS N L++ GNYVVQ +L L+ P + G
Sbjct: 120 CVLQRCISHSTGEYRENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEG 179
Query: 214 HYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVET 271
+YV LS + S VV+K L + IV ELL++ Q+ + NYVIQ AL
Sbjct: 180 NYVHLSTQRFSSHVVEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL--- 236
Query: 272 MRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ +H + ++ H A +R Y
Sbjct: 237 -QVYEGPLHNAFIEAIESHKAIMRNSPYS 264
>gi|124506293|ref|XP_001351744.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23504673|emb|CAD51551.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|24849849|gb|AAM28242.1| RNA-binding protein Puf1 [Plasmodium falciparum]
Length = 1894
Score = 113 bits (282), Expect = 1e-22, Method: Composition-based stats.
Identities = 92/304 (30%), Positives = 159/304 (52%), Gaps = 12/304 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ L + + +++++ ELM +G ++ K +E C Q+ II
Sbjct: 835 QTGCRILQRILEKKNPKHIEEIYNEALDHIIELMVDPFGNYLCQKLMEVCTSEQIEKIID 894
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K + DQL + AS+ G+ +V+KLI+++ ++P + ALK L+ G+ V+
Sbjct: 895 KSS--DQL-INASISVHGTRTVQKLIEMI-KTPSQIKKTTKALKNSIITLIKDINGNHVV 950
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL +H+ DFIY+A L +C+ ++ H GC + ID+ ++++ + IS NA
Sbjct: 951 QKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVIQRCIDSANEAQKELFIRNISNNAL 1010
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
L + GNYVVQ++LNL + + I L + +L++ K S VV+K L N
Sbjct: 1011 DLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIEELAVQKFSSNVVEKCLIIGNNKCR 1070
Query: 239 HYIVEELLNSDQ--ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
I+ E+L D+ + Q+ D +GNYVIQ AL + L+ +LV ++ ++ LR
Sbjct: 1071 KLIINEILKKDKDILKQIILDPFGNYVIQRAL-SVASEPELT---KLVEGIKPYIKELRN 1126
Query: 297 MKYG 300
+ G
Sbjct: 1127 ISSG 1130
Score = 37.7 bits (86), Expect = 7.4, Method: Composition-based stats.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRR 168
LM+ G+ + K +E + + + I + + + + G + I+ +K S+
Sbjct: 867 LMVDPFGNYLCQKLMEVCTSEQIEKIIDKSSDQLINASISVHGTRTVQKLIEMIKTPSQI 926
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
K+ + + +L + +GN+VVQ L D I A+ + V++S + G V+
Sbjct: 927 KKTTKALKNSIITLIKDINGNHVVQKCLITLTSHQCDFIYEAILNNCVEVSTHRHGCCVI 986
Query: 229 QKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
Q+ + N + S+ L + D +GNYV+Q L + L + +L+ ++
Sbjct: 987 QRCIDSANEAQKELFIRNISNNALDLVQDAFGNYVVQYILNLGNEKVNLEIANKLLPNIE 1046
Query: 289 QHLAALRVMKYGSN 302
+ L V K+ SN
Sbjct: 1047 E----LAVQKFSSN 1056
>gi|340517824|gb|EGR48067.1| RNA binding protein [Trichoderma reesei QM6a]
Length = 661
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 155/309 (50%), Gaps = 15/309 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSG-FTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
G +YLQ+KL + W+ + ELM+ +G ++ K +E CN+ + ++I
Sbjct: 327 GCRYLQKKLEERVHMNQVHMIWLETNQHVIELMTDPFGNYLCQKLLELCNDDERTVLIQN 386
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
+ QD + + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 387 AS-QDMVRI--ALNQHGTRALQKMIETVS-TPQQVHLIIEALRYRVVQLIQDLNGNHVIQ 442
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS 181
KCL FI+ A E C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 443 KCLNKLTASDAQFIFDAVGEKCVEVGTHRHGCCVLQRCIDHATGDQKLWLIQCITKDARI 502
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVH 239
L + GNYVVQ++++L +P + I + G LS K S V++K L+ +
Sbjct: 503 LVQDPFGNYVVQYIIDLHEPTFTEPIVASFEGCISMLSRHKFSSNVIEKCLRCAQPPSKD 562
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV ELL I D + NYV+QTAL + Q + RLV ++ L +R Y
Sbjct: 563 MIVSELLGD--IEGCLQDSFANYVVQTALDFSTPQ----LKHRLVEAIRPVLPKIRTTPY 616
Query: 300 GSNKEIQKK 308
G + IQ K
Sbjct: 617 G--RRIQAK 623
>gi|297797465|ref|XP_002866617.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
gi|297312452|gb|EFH42876.1| hypothetical protein ARALYDRAFT_919767 [Arabidopsis lyrata subsp.
lyrata]
Length = 415
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 123/245 (50%), Gaps = 10/245 (4%)
Query: 39 GRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH 98
G F I N +L ++ K+T + F+ DK GS V++L Q+ +L
Sbjct: 95 GSTEFNDMILRNNGRELHGVVSKLTSESDYFVEIVSDKEGSRRVRRLFGKFHQTDEIL-- 152
Query: 99 VMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNN 158
++A+ R F +M K V + + S + + + L LY A E GCI LN
Sbjct: 153 -LNAIVRRFIDIMTGKYSYLVAITAFKVSESFE---LVSLTLRDALYFASDEIGCIALNQ 208
Query: 159 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDL 218
I R + H IS NA LS SGN+VVQHVLN D + + F L G+YV+L
Sbjct: 209 IITESNNIFRYEFFHEISENADWLSMDDSGNFVVQHVLNFHDLECTNRVAFRLCGYYVEL 268
Query: 219 SLTKCGSFVVQKFLKYQN--AVHYIVEELLNSD--QILQVASDKYGNYVIQTALVETMRQ 274
S + GS++V++ L+ + A+ +V EL+ + ++A D +GNYV+Q AL T RQ
Sbjct: 269 SFERRGSYIVEQILESGSMIALDLVVSELMECGGFTLWRLAQDAFGNYVVQKALRVTRRQ 328
Query: 275 DRLSV 279
R+ +
Sbjct: 329 GRVDL 333
>gi|408388462|gb|EKJ68146.1| hypothetical protein FPSE_11613 [Fusarium pseudograminearum CS3096]
Length = 859
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + +I
Sbjct: 355 QHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDDERTTLIQ 414
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 415 NAS---QDMVRIALNQHGTRALQKMIEYVS-TPQQVHIIIEALRFRVVELIQDLNGNHVI 470
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 471 QKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHAR 530
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + GNYVVQ++++L +P + I + LS K S V++K L+
Sbjct: 531 VLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEKCLRCSQPPSR 590
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV+ELL + + ++ D + NYVIQTAL + RLV ++ L +R
Sbjct: 591 DLIVDELLRNQDMERLLRDSFANYVIQTALEYATPHYKY----RLVEAIRPILPQIRTTP 646
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 647 YG--RRIQAK 654
>gi|385303007|gb|EIF47109.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 435
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L G K+F + ELM +G ++ K +E NE Q ++
Sbjct: 41 QHGCRFLQRQLEVGGPEAATKIFNEIQLNVIELMIDPFGNYLIQKLLERVNEKQRTTLVR 100
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q F+ ++D G+ +++KL++ V ++S+L L G+ VI
Sbjct: 101 NASSQ---FVRIALDPHGTRALQKLVECVNTKEEFQI-IVSSLSSYVVLLSRDLNGNHVI 156
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ +FI+ AA EHC+ +A H GC L D+ ++ + + + N
Sbjct: 157 QKCLQKLPPSSCNFIFDAACEHCVKIAKHRHGCCVLQRCFDHGSPAQCENLSLKVGENXV 216
Query: 181 SLSRHRSGNYVVQHVLNLEDPFL------------------IDAICFALRGHYVDLSLTK 222
LS GNYVVQ+VL++E+ L I I ALR + V LS K
Sbjct: 217 ELSTDPYGNYVVQYVLSMEETRLRSQHDEEAVANTPDTSKAIGLIITALRDNLVRLSTHK 276
Query: 223 CGSFVVQKFLKYQNAVHYIVEELLNSDQI-LQVASDKYGNYVIQTAL 268
GS VV+K L+ ++ +LL I + + D YGNYV+QT L
Sbjct: 277 FGSNVVEKSLRIPTLAPVLIGQLLKEPDIPIILLHDAYGNYVLQTTL 323
>gi|224067236|ref|XP_002302423.1| predicted protein [Populus trichocarpa]
gi|222844149|gb|EEE81696.1| predicted protein [Populus trichocarpa]
Length = 486
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + S +D LF+ V + L++ +G +V K IE +E Q ++
Sbjct: 196 QHGCKFLQRLIESATREQIDMLFYEVIDYVGGLIADPFGNYVVQKLIEVISEEQRTRVLR 255
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T D + +D G+ +V+KL+ + +P + V+SAL + L+ G VI
Sbjct: 256 MLTRTDFQLVRICLDVHGTRAVQKLLNCIT-NPLQVSLVVSALNQGAVALIKDSNGHHVI 314
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
++ N +I + E C +A ++ GC L ++ +G R +++ I NA
Sbjct: 315 QHSMKHFSPQDNKYILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRLVAEIIANAL 374
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KYQNAV 238
L+ GNYVVQH+L+L+ P + + + G Y+ LS K GS VV+K L ++
Sbjct: 375 LLAEDHYGNYVVQHILDLKMPQITENLLTQFEGSYMALSCNKYGSNVVEKCLLTTSEDQS 434
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL 268
I+ ELL++ + D +GN+VIQ AL
Sbjct: 435 TQIILELLSNPGASMLLVDPFGNFVIQKAL 464
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 123/286 (43%), Gaps = 46/286 (16%)
Query: 20 DKLFWV-VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFG 78
D + W +SG L Q+G + IES Q+ ++ ++ D + L + D FG
Sbjct: 178 DYVSWEDLSGKIVALAKDQHGCKFLQRLIESATREQIDMLFYEVI--DYVGGLIA-DPFG 234
Query: 79 SSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQA 138
+ V+KLI+V+++ +R M+T+ ++ CL D
Sbjct: 235 NYVVQKLIEVISEE-----------QRTRVLRMLTRTDFQLVRICL--------DVHGTR 275
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL 198
A++ L CI + ++ ++ A +L + +G++V+QH +
Sbjct: 276 AVQKLL-------NCI--------TNPLQVSLVVSALNQGAVALIKDSNGHHVIQHSMKH 320
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVAS 256
P I + +++ K G V+Q+ ++Y H +V E++ + L +A
Sbjct: 321 FSPQDNKYILKQVAEKCFEIATNKSGCCVLQRCVEYSEGEHRDRLVAEIIAN--ALLLAE 378
Query: 257 DKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
D YGNYV+Q L M Q + + L+T+ + AL KYGSN
Sbjct: 379 DHYGNYVVQHILDLKMPQ----ITENLLTQFEGSYMALSCNKYGSN 420
>gi|260947166|ref|XP_002617880.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
gi|238847752|gb|EEQ37216.1| hypothetical protein CLUG_01339 [Clavispora lusitaniae ATCC 42720]
Length = 707
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 140/270 (51%), Gaps = 9/270 (3%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
ELM+ +G ++ K E+ + Q LI++K +L +A +D G+ +++KL++ +
Sbjct: 435 ELMTDPFGNYLIQKLFENVSADQR-LILVK-NAAPELIRIA-LDPHGTRALQKLVECIDT 491
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
++++L L G+ V+ KCL+ N FI+ AA EHC+ +A H
Sbjct: 492 KEESQL-IINSLSPHIVPLSRDLNGNHVVQKCLQELKAEDNQFIFDAASEHCIEIATHRH 550
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC L +D+ S+RKQ+ ++ NA LS GNYVVQ+VL+ D I + +
Sbjct: 551 GCCVLQRCLDHGNSSQRKQLSLKVAENATKLSLDPFGNYVVQYVLSRGDEESITIVLNHI 610
Query: 212 RGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNYVIQTALVE 270
R + + LSL K GS V++K L+ + ++ LL NSD+ + +D +GNYV+QT+L
Sbjct: 611 RANVISLSLHKFGSNVIEKSLRINKLTNEVIAVLLENSDKFSMLLNDAFGNYVLQTSLDV 670
Query: 271 TMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
D +L LQ L ++ +G
Sbjct: 671 ASASDLA----KLAQSLQPLLPNIKNTPHG 696
>gi|344231266|gb|EGV63148.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 387
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 143/278 (51%), Gaps = 23/278 (8%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
ELM +G ++ K E+ + Q +I++K D F+ ++D G+ +++KL++ ++
Sbjct: 113 IELMIDPFGNYLIQKLFENVSVDQ-RIILVKNAAPD--FIRIALDPHGTRALQKLVECIS 169
Query: 91 QSPP-------LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHC 143
L H++S + L G+ V+ KCL+ + +N FI+ A HC
Sbjct: 170 TEAECKLIIDNLSPHIVSLSRDL--------NGNHVVQKCLQKLSSKQNQFIFDTASSHC 221
Query: 144 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFL 203
+A H GC L +D ++RKQ+ I+ NA +LS GNYVVQ+VL+ D
Sbjct: 222 NDIATHRHGCCVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVLSRGDEQS 281
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNY 262
+ I ++ H + LSL K GS V++K L+ + +V+ LL N+D + +D +GNY
Sbjct: 282 VAIILNHIKSHLIVLSLHKFGSNVIEKSLRISKLTNGLVQALLMNADHFQDLLNDPFGNY 341
Query: 263 VIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
V+QT+L + D + +L + LQ L ++ +G
Sbjct: 342 VLQTSLDVATKADLV----KLSSALQPLLPNVKNTPHG 375
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCG 224
K I+ +S + SLSR +GN+VVQ L + ++ F+ D H D++ + G
Sbjct: 175 KLIIDNLSPHIVSLSRDLNGNHVVQKCLQKLSSKQNQFIFDTA----SSHCNDIATHRHG 230
Query: 225 SFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
V+Q+ L Y NA ++ ++ D +GNYV+Q L R D SV ++
Sbjct: 231 CCVLQRCLDYGNAAQRKQLSSKIAENATNLSLDPFGNYVVQYVL---SRGDEQSV-AIIL 286
Query: 285 TKLQQHLAALRVMKYGSN 302
++ HL L + K+GSN
Sbjct: 287 NHIKSHLIVLSLHKFGSN 304
>gi|46107916|ref|XP_381017.1| hypothetical protein FG00841.1 [Gibberella zeae PH-1]
Length = 779
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 154/310 (49%), Gaps = 12/310 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL + + ++ + ELM+ +G ++ K +E CN+ + +I
Sbjct: 354 QHGCRYLQKKLEERNPDQVHMIWNETNKHVIELMTDPFGNYLCQKLLEFCNDDERTTLIQ 413
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q + ++++ G+ +++K+I+ V+ +P ++ ++ AL+ L+ G+ VI
Sbjct: 414 NAS---QDMVRIALNQHGTRALQKMIEYVS-TPQQVHIIIEALRFRVVELIQDLNGNHVI 469
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A +C+ + H GC L ID+ G ++ ++ I+ +A
Sbjct: 470 QKCLNRLPPQDAQFIFDAVGNNCVEVGTHRHGCCVLQRCIDHASGDQKLWLIQRITEHAR 529
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + GNYVVQ++++L +P + I + LS K S V++K L+
Sbjct: 530 VLVQDPFGNYVVQYIIDLNEPIFTEPIVQTFKDCISQLSRHKFSSNVIEKCLRCSQPPSR 589
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV+ELL + + ++ D + NYVIQTAL + RLV ++ L +R
Sbjct: 590 DLIVDELLRNQDMERLLRDSFANYVIQTALEYATPHYKY----RLVEAIRPILPQIRTTP 645
Query: 299 YGSNKEIQKK 308
YG + IQ K
Sbjct: 646 YG--RRIQAK 653
>gi|134055097|emb|CAK43737.1| unnamed protein product [Aspergillus niger]
Length = 765
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 151/302 (50%), Gaps = 10/302 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 366 QHGCRYLQRKLEERNPEHVQMIFEETRLHVVELMTDPFGNYLCQKLLEYSNDEQRTDLIN 425
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ + V+ +L+ L+ G+ VI
Sbjct: 426 NAAHQ---LVKIALNQHGTRALQKMIEFISTAE-QTQTVIHSLEDHVVELVQDLNGNHVI 481
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A +C+ + H GC L ID+ G ++ +++ I+ NA
Sbjct: 482 QKCLNRLSAEDAQFIYDAVGANCVVVGTHRHGCCVLQRCIDHASGDQKARLIAQITANAF 541
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C RG+ LS K S V++K L+ +
Sbjct: 542 ALVQDPFGNYVVQYILDLAEPHFTEPLCQNFRGNIPALSKQKFSSNVIEKCLRTADFQIR 601
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L ++ ++ D + NYV+QTA+ + R R+V ++ L ++R
Sbjct: 602 RQMIDEMLAGAELEKMLRDSFANYVVQTAMDFADAETRA----RIVDCIRPILPSIRQTP 657
Query: 299 YG 300
+G
Sbjct: 658 HG 659
>gi|367035312|ref|XP_003666938.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
gi|347014211|gb|AEO61693.1| hypothetical protein MYCTH_2312108 [Myceliophthora thermophila ATCC
42464]
Length = 827
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 164/316 (51%), Gaps = 24/316 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWVVSG-FTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ G +YLQ++L ++RI ++ + W+ + ELM+ +G ++ K +E C++ + +
Sbjct: 385 QHGCRYLQKQL---ENRIPEQIHMIWLETNQHVVELMTDPFGNYLCQKLLEYCSDDERTV 441
Query: 58 IILKITFQDQLFLLASV--DKFGSSSVKKLIK-VVAQSPPLLYHVMSALKRLFKFLMMTK 114
+I Q+ + S+ ++ G+ +++K+I+ V Q + ++ AL+ L+
Sbjct: 442 LI-----QNAAPSMVSIALNQHGTRALQKMIEHVTTQV--QINLIVEALRNQVVELIQDL 494
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI KCL FI+ A +HC+ + H GC L ID+ G+++ ++
Sbjct: 495 NGNHVIQKCLNKLSAADASFIFDAVGKHCVEVGTHRHGCCVLQRCIDHADGNQKVWLVEC 554
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK- 233
I+ +A +L + GNYVVQ++++L + + + G LS K S VV+K L+
Sbjct: 555 ITEHAVTLVQDPFGNYVVQYIIDLNEATFTEPLVKQFEGRIAQLSKHKFSSNVVEKCLRC 614
Query: 234 -YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ IV ELL +I ++ D +GNYVIQTAL + +S H RL+ ++ L
Sbjct: 615 ASDESRDMIVSELLAPGEIERLLRDSFGNYVIQTALDYST---PISKH-RLIEAIRPLLP 670
Query: 293 ALRVMKYGSNKEIQKK 308
++R YG + IQ K
Sbjct: 671 SVRATPYG--RRIQAK 684
>gi|356518481|ref|XP_003527907.1| PREDICTED: putative pumilio homolog 10-like [Glycine max]
Length = 668
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 144/272 (52%), Gaps = 2/272 (0%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ ++ G + + +F + G ELM +G ++ K ++ C + Q I+L
Sbjct: 363 QNGCRFLQRMVAEGTYQDICMVFEGIIGNVVELMIDSFGNYLVQKLLDVCTDDQRLQIVL 422
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + S++ G+ V+KLI+ + + + V SA++ F L+ G+ +I
Sbjct: 423 MLTNHPAQLVRVSLNTHGTRVVQKLIETLTSTEQVSL-VKSAIQPGFLDLIKDLNGNHLI 481
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N FI+ AA++ C+ +A H+ GC L I + G R +++ I +
Sbjct: 482 QRCLQCLSCQDNQFIFDAAVKFCVEIATHQHGCFVLQRCIHHSVGKNRDKLVTEICKHGL 541
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVH 239
L++ GNYVVQ+V+ + + + + ++V LS K S VV+K L++ ++
Sbjct: 542 LLAQDAFGNYVVQYVIESDTAAVSAKLLSQFKENFVMLSTQKFSSHVVEKCLQHIGDSRS 601
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVET 271
IV ELL+ + Q+ D+Y NYVIQ+AL+ T
Sbjct: 602 RIVRELLSVPRFEQLLQDQYANYVIQSALLFT 633
>gi|358055198|dbj|GAA98967.1| hypothetical protein E5Q_05655 [Mixia osmundae IAM 14324]
Length = 852
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 152/312 (48%), Gaps = 16/312 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ KL G+ D +F + ELM+ +G ++ K E + Q +I
Sbjct: 457 QHGCRFLQRKLEEGNPEYRDMIFSEIFPHFAELMTDAFGNYLSQKLFEFATDEQRDALID 516
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I+ + + S++ G+ +V+KL+ + + +M AL L+ + VI
Sbjct: 517 SISGE---LVSISLNMHGTRAVQKLLDFLTTRRQVQSLIM-ALNLNVVTLIKDLNSNHVI 572
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL N FIY A +C+ +A H GC L ID+ S+R Q++ I+ N+
Sbjct: 573 QKCLNHLPPEDNQFIYNAVATNCIEVATHRHGCCVLQRCIDHASESQRIQLVTEITYNSL 632
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L GNYVVQ+VL+L D I+AI G+ LS K S VV+K ++ +A
Sbjct: 633 ILVGDPFGNYVVQYVLDLNDNRFIEAIVRQFVGNVCTLSAQKFSSNVVEKCIRVADAAGR 692
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHLAALRV 296
+V E LN + + ++ D + NYV+QTAL E ++ L R++T L + ++R
Sbjct: 693 KVLVNEFLNRNNLERMLRDSFANYVVQTALDWAEPAQKQELV---RMITPL---MPSIRN 746
Query: 297 MKYGSNKEIQKK 308
YG K I K
Sbjct: 747 TPYG--KRISAK 756
>gi|302657003|ref|XP_003020235.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
gi|291184046|gb|EFE39617.1| RNA-binding protein, putative [Trichophyton verrucosum HKI 0517]
Length = 927
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 12/303 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ-LALII 59
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q LI
Sbjct: 513 QHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLIN 572
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ Q+ L ++ G+ +++K+I+ ++ +P + V+ AL L+ G+ V
Sbjct: 573 IAAPHLVQIAL----NQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHV 627
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 628 IQKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSS 687
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NA 237
SL + GNYV+Q++L+L +P +C +G LS K S V++K ++ N
Sbjct: 688 YSLVQDPFGNYVIQYILDLGEPLFTGPLCATFQGSIPALSKQKFSSNVIEKCIRTSDFNM 747
Query: 238 VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
++E+L+ ++ + D + NYVIQTA+ + R L+ ++ L +R
Sbjct: 748 RRAFIKEMLSPHELPNMLRDSFANYVIQTAMDFADPESR----NTLIEAVRPLLPGIRSQ 803
Query: 298 KYG 300
+G
Sbjct: 804 PHG 806
>gi|356551678|ref|XP_003544201.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 622
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 139/269 (51%), Gaps = 2/269 (0%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G S + +F V ELM +G ++ K ++ + + ++
Sbjct: 317 QNGCRFLQRMIDEGTSEHVLIVFNGVIDDVVELMVDPFGNYLVQKLLDVGGDDERLQVVS 376
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+KLI V S + +MSA++ F L+ G+ VI
Sbjct: 377 MLTKEPGQLIKTSLNIHGTRVVQKLITTV-DSRKQIAMLMSAIQSGFLALIKDLNGNHVI 435
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N+FI+ AA + C+ +A H+ GC L ID G + +++ I +
Sbjct: 436 QRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYQDKLVKEICRHGL 495
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-H 239
L++ GNYVVQ+++ +E+P + +G+Y +LS+ K S VV+K L + +
Sbjct: 496 LLAQDPFGNYVVQYIIEMENPTASFKLHSQFKGNYTNLSMQKYSSHVVEKCLVHLAEIKS 555
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTAL 268
IV+E L+ Q+ D YGNYV+Q AL
Sbjct: 556 RIVQEFLSFPHFEQLLQDLYGNYVVQRAL 584
>gi|147858798|emb|CAN82911.1| hypothetical protein VITISV_015280 [Vitis vinifera]
Length = 773
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 16/283 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ G + + +F + ELM +G ++ K ++ CNE Q I++
Sbjct: 342 QHGCRFLQRMFDEGTPQDVQIIFNEIIDHVVELMMNPFGNYLMQKLLDVCNEEQRMQILV 401
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+KLI+ + ++ + V+SAL+ F L+ G+ VI
Sbjct: 402 MLTEESGELVRISLNTHGTRVVQKLIETL-KTRQQISRVISALEPGFLALIKDLNGNHVI 460
Query: 121 LKCLEPSYNHKND-------------FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR 167
+CL+ N FI+ AA ++C+ +A H+ GC L I + G
Sbjct: 461 QRCLQCLSKEDNKEEMIGQLLTCTKKFIFVAAAKYCVEIATHQHGCCVLQRCISHSTGEY 520
Query: 168 RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
R+ ++ IS N L++ GNYVVQ +L L+ P + G+YV LS + S V
Sbjct: 521 RENLVAEISSNGFLLAQDAFGNYVVQFILELKIPSATSNLIAQFEGNYVHLSTQRFSSHV 580
Query: 228 VQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
V+K L + IV ELL++ Q+ + NYVIQ AL
Sbjct: 581 VEKCLTVCTEENQSRIVHELLSTSHFEQLLQHPHANYVIQKAL 623
>gi|356550783|ref|XP_003543763.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 623
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 150/300 (50%), Gaps = 7/300 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ + G S + LF V ELM +G ++ K ++ C E + ++
Sbjct: 318 QNGCRFLQRMIDEGTSEDVLVLFNGVIDDVVELMIDPFGNYLVQKLLDVCGEDERLQVVS 377
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ V+KLI V S + + SA++ F L+ G+ VI
Sbjct: 378 MLTEEPGQLVKTSLNLHGTRVVQKLITTV-DSRKQIAMLRSAIQSGFLALIKDLNGNHVI 436
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
+CL+ N+FI+ AA + C+ +A H+ GC L ID G + ++ I +
Sbjct: 437 QRCLQYFSCKDNEFIFYAATKFCVEIATHQHGCCVLQRCIDYSTGKYKDMLVKEICRHGH 496
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L++ GNYVVQ+++ +E+P + +G+Y +LS+ K S VV+K L + +
Sbjct: 497 LLAQDPFGNYVVQYIIEMENPSASLKLHSQFKGNYANLSMQKFSSHVVEKCLVHIVEIRS 556
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV+EL + + ++ D Y NYV+Q AL T + S+H L ++ + LR Y
Sbjct: 557 RIVQELSSFPHLERLLQDPYANYVVQRALGVT----KGSLHASLAEAVRPY-KTLRSSPY 611
>gi|429329361|gb|AFZ81120.1| pumilio-family RNA binding repeat domain-containing protein
[Babesia equi]
Length = 798
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 146/304 (48%), Gaps = 12/304 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ +L D + + V LM+ +G ++ K + C+ QL II
Sbjct: 336 QTGCRMLQRQLEYNDENFIASILDEVIDHLVVLMTDPFGNYLCQKLMTVCSSEQLGRIIK 395
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ FL ++ G+ +++KLI+VV + P + V S L L+ G+ VI
Sbjct: 396 GV---EKDFLSICLNMHGTRAIQKLIEVVTE-PEHISFVTSVLSTAVVDLVNDLNGNHVI 451
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + +FIY+A ++C+YLA H GC + ID +R ++ IS
Sbjct: 452 QKCLISLKSEDCEFIYKAMNDNCVYLATHRHGCCVMQRCIDAANPQQRNMLIDTISSKTL 511
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L GNYV+Q+VL L+D + I AL + + + K S VV++ L +
Sbjct: 512 DLVEDAFGNYVIQYVLRLKDDEINRRIVVALADNVTEFAKQKFSSNVVERCLIFCPLEVR 571
Query: 239 HYIVEELLNS--DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
++ + LN D + ++ D +GNYVIQ L + D LS L+ ++Q HL L+V
Sbjct: 572 SILISKFLNVPFDVLKELILDPFGNYVIQRVL-NVAQSDELSA---LLDRIQPHLEELKV 627
Query: 297 MKYG 300
G
Sbjct: 628 ASSG 631
>gi|302844187|ref|XP_002953634.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300261043|gb|EFJ45258.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 271
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 139/270 (51%), Gaps = 13/270 (4%)
Query: 34 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP 93
M +G ++ K ++ C+E Q L+++ + +L +A ++ G+ +V+KLI+ ++ S
Sbjct: 1 MMDPFGNYLVQKLLDRCSEQQR----LEVSERGELVTVA-LNTHGTRAVQKLIETLS-SR 54
Query: 94 PLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 153
+ AL+ L+ G+ V+ +CL+ + FIY AA+ C+ +A H GC
Sbjct: 55 EQRAIAIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVAQCVEVATHRHGC 114
Query: 154 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRG 213
L ID ++++ ++ I+ +A LS+ GNYVVQ+VL L + ALRG
Sbjct: 115 CVLQRCIDFATPAQKQALVQEIANHALVLSQDAFGNYVVQYVLELGHLETCTQVVSALRG 174
Query: 214 HYVDLSLTKCGSFVVQKFLKYQN---AVHYIVEELLNSDQILQVASDKYGNYVIQTALVE 270
+ LSL K S VV++ LK IV EL+ + ++ D +GNYVIQ+AL
Sbjct: 175 SFSSLSLQKFSSNVVERCLKLGGMDAEREAIVRELIAPTSLSRLLQDGFGNYVIQSALSV 234
Query: 271 TMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
T Q +H LV ++ +L LR +G
Sbjct: 235 TSGQ----IHNMLVEAIRPYLPTLRGTPHG 260
>gi|15220217|ref|NP_174811.1| protein pumilio 9 [Arabidopsis thaliana]
gi|122244101|sp|Q1PFN9.1|PUM9_ARATH RecName: Full=Pumilio homolog 9; Short=APUM-9; Short=AtPUM9
gi|91805917|gb|ABE65687.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332193705|gb|AEE31826.1| protein pumilio 9 [Arabidopsis thaliana]
Length = 564
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 12/288 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G + + EL +G ++ K + +E Q LI+ +
Sbjct: 263 GCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVSVL 322
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + + ++ +G+ V+K+I+ V ++ + V S LK F L+ G+ VI
Sbjct: 323 TSNPRELIRICLNTYGTRVVQKMIETV-KTKQQIALVKSGLKPGFLALVKDLNGNHVIQS 381
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ + N+F+ +AA ++C +A H GC L I N G +R++++ IS N+ L
Sbjct: 382 CLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHL 441
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAI--CFALRGHYVDLSLTKCGSFVVQKFL-KYQNAVH 239
S+ GNYVVQ++++ + + A+ R HY +L+ K S V++K L KY +
Sbjct: 442 SQDPFGNYVVQYLIDQQ----VSAVKLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRA 497
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
IV ELL + D Y NYVIQTAL T + V +LV K+
Sbjct: 498 EIVRELLCVPNFEYLLQDPYANYVIQTALSVT----KGPVRAKLVAKV 541
>gi|357152596|ref|XP_003576172.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 506
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 150/301 (49%), Gaps = 8/301 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L G R +D +F V+ +LM +G ++ K + C+ Q ++
Sbjct: 200 QHGCRFLQQRLDDG-KREVDFVFAGVARHAVDLMVNPFGNYLMQKLLAVCDREQRMALVR 258
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + + S++ G+ +V+KLI+ + ++ + V++AL+ F L+ G+ V+
Sbjct: 259 ALTKDPFVLVRISLNVHGTRAVQKLIESL-RTREEIQLVVAALRPGFLELIKDPNGNHVV 317
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ N I+ AA +CL + GC L I G +++++ I+ N
Sbjct: 318 QKCLQAFEADDNKPIFAAAAIYCLDIGMQCHGCCVLQRCIARSTGEHKEKLVAAIARNGF 377
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L++ GNYVVQ+V+ L+ ++ G Y+ LS+ K S VV+K LK +
Sbjct: 378 ELAQDAYGNYVVQYVIELKVATANASLAQQFEGKYIHLSMQKFSSNVVEKCLKVFKEADK 437
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I+ ELL + ++ Y NYV+ +AL + + S+H L ++ H+ LR
Sbjct: 438 ATIILELLAAPHFERLLQHPYANYVVYSAL----QNSKGSLHSALTNAIRPHVELLRTSP 493
Query: 299 Y 299
Y
Sbjct: 494 Y 494
>gi|302141949|emb|CBI19152.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 135/267 (50%), Gaps = 7/267 (2%)
Query: 34 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP 93
M +G ++ K + CNE Q I+L +T + + S++ G+ V+KL+ + ++
Sbjct: 1 MMNPFGNYLMQKLFDVCNEDQRMQIVLALTEEPGELVRISLNAHGTRVVQKLVMTL-KTR 59
Query: 94 PLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGC 153
+ V+ AL+ F L G+ V+ +CLE F + A ++C+ +A H GC
Sbjct: 60 QQISLVVLALEPYFLDLTKDHHGNHVVQRCLEYLSCEDIKFFFYDAAKYCVDIATHRHGC 119
Query: 154 INLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRG 213
L I G ++++ IS N L++ GNYV+Q+++ L+ P I ++ G
Sbjct: 120 CVLQRCITRSTGKHGEKLVAEISANGLLLAQDDFGNYVIQYIIELKIPSAIASLMSQFEG 179
Query: 214 HYVDLSLTKCGSFVVQKFLKY-QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETM 272
+YV LS+ K S VV+K LK+ + + IV E L+ Q+ D + NYVIQ+AL T
Sbjct: 180 NYVHLSMQKFSSHVVEKCLKHLEESRPRIVHEFLSVPHFEQLMQDPFANYVIQSALEVT- 238
Query: 273 RQDRLSVHQRLVTKLQQHLAALRVMKY 299
+ +H L+ ++ H+ LR Y
Sbjct: 239 ---KGPLHASLIEAVRPHI-ILRTSPY 261
>gi|440472633|gb|ELQ41484.1| pumilio domain-containing protein, partial [Magnaporthe oryzae Y34]
gi|440485994|gb|ELQ65903.1| pumilio domain-containing protein, partial [Magnaporthe oryzae
P131]
Length = 811
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 158/313 (50%), Gaps = 18/313 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWVVSG-FTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ G +YLQ++L + R+ D+ + W+ + ELM+ +G ++ K +E CNE + +
Sbjct: 362 QHGCRYLQKQL---EGRVPDQVHMIWLETNQHVVELMTDPFGNYLCQKLLEFCNEEERTV 418
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
+I + QD + + ++++ G+ +++K+I+ + + + S R+ + + G+
Sbjct: 419 LIQNAS-QDMVRI--ALNQHGTRALQKMIEFINTEEQVQIIIESLRDRVVELIQDLN-GN 474
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI KCL + FI+ A + + H GC L ID+ G ++ ++ I+
Sbjct: 475 HVIQKCLNKLSCLHSQFIFDAVGAAAVEVGTHRHGCCVLQRCIDHASGDQKVWLIARITE 534
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A +L + GNYVVQ++++L +P + + RG LS K S V++K L+
Sbjct: 535 HAVTLVQDPFGNYVVQYIIDLNEPTFTEPLVGMFRGRISFLSRHKFSSNVIEKCLRCSAD 594
Query: 238 V--HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
V I EE+L +I ++ D + NYVIQTAL + + RLV ++ L +R
Sbjct: 595 VSKDMIAEEILAPGEIERLIRDSFANYVIQTALEYSTPMTK----HRLVETIRPILPTVR 650
Query: 296 VMKYGSNKEIQKK 308
YG + IQ K
Sbjct: 651 STPYG--RRIQAK 661
>gi|240276968|gb|EER40478.1| RNA-binding protein [Ajellomyces capsulatus H143]
Length = 847
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 140/300 (46%), Gaps = 48/300 (16%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 466 GCRYLQKKLEEQSPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEFSNDEQRTALI--- 522
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+++ +L+K+ L H AL+++ +F+ +
Sbjct: 523 ----------------NNAAPQLVKIA-----LNQHGTRALQKMIEFISTPE-------- 553
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
FIY A E C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 554 ----------QFIYDAVGESCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITNNAFTL 603
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L +P I+ IC + RG+ LS K S V++K ++ + +
Sbjct: 604 VQDPFGNYVVQYILDLNEPHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADPQSRSA 663
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+V+E+L ++ ++ D + NYV+QTA+ + R +LV ++ L A+R +G
Sbjct: 664 LVDEMLVPSELEKMLRDSFANYVVQTAMDFADPEYRT----KLVEAIRPILPAIRQTPHG 719
>gi|8778968|gb|AAF79883.1|AC021198_3 Contains similarity to a putative protein CAB78009 gi|7267527 from
Arabidopsis thaliana BAC T32A17 gb|AL161513. It contains
Pumilio-family RNA binding domains PF|00806 [Arabidopsis
thaliana]
Length = 671
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 145/291 (49%), Gaps = 12/291 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G + + EL +G ++ K + +E Q LI+ +
Sbjct: 370 GCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFDVSDEEQRTLIVSVL 429
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + + ++ +G+ V+K+I+ V ++ + V S LK F L+ G+ VI
Sbjct: 430 TSNPRELIRICLNTYGTRVVQKMIETV-KTKQQIALVKSGLKPGFLALVKDLNGNHVIQS 488
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ + N+F+ +AA ++C +A H GC L I N G +R++++ IS N+ L
Sbjct: 489 CLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVGLQRERLVAEISRNSLHL 548
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAI--CFALRGHYVDLSLTKCGSFVVQKFL-KYQNAVH 239
S+ GNYVVQ++++ + + A+ R HY +L+ K S V++K L KY +
Sbjct: 549 SQDPFGNYVVQYLIDQQ----VSAVKLLVQFRMHYAELATQKFSSHVIEKCLRKYPESRA 604
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
IV ELL + D Y NYVIQTAL T + V +LV K+ ++
Sbjct: 605 EIVRELLCVPNFEYLLQDPYANYVIQTALSVT----KGPVRAKLVAKVYRY 651
>gi|363755368|ref|XP_003647899.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891935|gb|AET41082.1| hypothetical protein Ecym_7236 [Eremothecium cymbalariae
DBVPG#7215]
Length = 731
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 154/314 (49%), Gaps = 24/314 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L G S +F + + ELM+ +G ++ K +E E Q ++
Sbjct: 418 QHGCRFLQRQLDIGGSEAATSIFEETNQYVVELMTDSFGNYLIQKLVERVTEEQRITLVK 477
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK-----VVAQSPPLLYHVMSALKRLFKFLMMTKP 115
+ F+ ++D G+ +++KL++ V +Q+ ++S+L+ L
Sbjct: 478 SSAPR---FVSIALDPHGTRALQKLVECIDTEVESQT------IISSLRDSVVELSRDLN 528
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ KCL+ + ++ FI+ AA + C+ +A H GC L +D+ +RKQ+ I
Sbjct: 529 GNHVVQKCLQRLSSAESQFIFDAACKECVKIATHRHGCCVLQRCLDHGNKEQRKQLCDNI 588
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLID-----AICFALRGHYVDLSLTKCGSFVVQK 230
N L+ GNYVVQ++L E + I L+ ++LSL K GS VV+K
Sbjct: 589 LDNVNLLTLDPFGNYVVQYILTKESELGSNHRHTHEIVNILKPRIIELSLHKFGSNVVEK 648
Query: 231 FLKYQNAVHYIVEELLN---SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
L+ ++ ELLN S I Q+ D +GNYV+QTAL + + ++ RL L
Sbjct: 649 ILRTPIVAEIMIAELLNTGASHGIEQLLHDGFGNYVLQTAL-DVAKPANSYLYNRLTEIL 707
Query: 288 QQHL-AALRVMKYG 300
+ L +R +G
Sbjct: 708 KPMLIGPIRNTPHG 721
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 182 LSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
LSR +GN+VVQ L + E F+ DA C V ++ + G V+Q+ L + N
Sbjct: 523 LSRDLNGNHVVQKCLQRLSSAESQFIFDAACKEC----VKIATHRHGCCVLQRCLDHGNK 578
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR----LVTKLQQHL 291
+ + +L++ +L + D +GNYV+Q L ++ L + R +V L+ +
Sbjct: 579 EQRKQLCDNILDNVNLLTL--DPFGNYVVQYILT---KESELGSNHRHTHEIVNILKPRI 633
Query: 292 AALRVMKYGSN 302
L + K+GSN
Sbjct: 634 IELSLHKFGSN 644
>gi|388579386|gb|EIM19710.1| ARM repeat-containing protein, partial [Wallemia sebi CBS 633.66]
Length = 664
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 142/279 (50%), Gaps = 12/279 (4%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
ELM+ +G ++ K +E N+ Q + ++ + + S++ G+ +V+K+I ++
Sbjct: 235 ELMTDPFGNYLCQKMLEFANDQQRDTLCETVSPE---LVTISLNMHGTRAVQKMIDYLST 291
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
+ +MS L L+ G+ VI KCL + N FIY A +C+ +A H
Sbjct: 292 RRQINTIIMS-LSLNVVTLIKDLNGNHVIQKCLNRLIPNDNQFIYNAVASNCIEVATHRH 350
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC L ID+ +R Q++ I+ +A +L + GNYVVQ+VL+L D D +
Sbjct: 351 GCCVLQRCIDHASDQQRIQLVTEITYHALTLIQDPFGNYVVQYVLDLNDNRFSDGVVRQF 410
Query: 212 RGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELLNSDQILQVASDKYGNYVIQTALV 269
GH LS+ K S V++K ++ +A +++EL + ++ ++ D +GNYV+QTAL
Sbjct: 411 LGHICALSVQKFSSNVIEKCIRVADASTRSSVIDELNHRPRLEKLLRDAFGNYVVQTALD 470
Query: 270 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNKEIQKK 308
R++ LV ++ L +R YG K IQ K
Sbjct: 471 FAEPVQRIA----LVEAIRPILPMIRNTPYG--KRIQSK 503
>gi|297809043|ref|XP_002872405.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
gi|297318242|gb|EFH48664.1| hypothetical protein ARALYDRAFT_351970 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 148/299 (49%), Gaps = 10/299 (3%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ LQ+ ++ G +DK+F + ELM +G VF K +E C + Q+ + L I
Sbjct: 132 SRLLQDVIAKGSKETIDKIFDNLISNVCELMLDPFGHRVFEKLMEKCTDEQITRV-LDIV 190
Query: 64 FQDQL-FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q L F+ VD G+ +++ L++ + S + M+ L + L + VIL
Sbjct: 191 LQQPLQFVRLCVDSHGTRAIQDLMRSLC-SVEQIARFMATLCHVALLLTKDANANLVILF 249
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C + ++ + +++C +A + G LN I R ++ I N L
Sbjct: 250 CFNHFSPSHSRYLLEVIVQNCYQVAIDQHGYCMLNQCIRQSSRELRDPLIKEIITNVVRL 309
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-AVHYI 241
++ GNYVVQ+VL+LED + A+ L G+YV LS K GS VVQK L+ + I
Sbjct: 310 CKNCYGNYVVQYVLDLEDCEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLENREFCSRRI 369
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ ELL+ L V D +GNYVIQTA + + +D + L+ + ++++ +R YG
Sbjct: 370 IAELLSDIDSLLV--DPFGNYVIQTAWI--VSEDHM--RNVLLYHINRNVSFMRCNVYG 422
>gi|225678938|gb|EEH17222.1| RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 1070
Score = 108 bits (269), Expect = 4e-21, Method: Composition-based stats.
Identities = 82/320 (25%), Positives = 151/320 (47%), Gaps = 30/320 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 620 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALINNA 679
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI K
Sbjct: 680 APQ---LVKIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRGRVVELVQDLNGNHVIQK 735
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 736 CLNRLSATDAQFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITKNAFTL 795
Query: 183 SRHRSGNYVVQHV--------------------LNLEDPFLIDAICFALRGHYVDLSLTK 222
+ GNYVVQ++ ++L + I+ IC + RG+ LS K
Sbjct: 796 VQDPFGNYVVQYICKEHQPPQMIWTNFANNDDAVDLNERHFIEPICRSFRGNIPALSKQK 855
Query: 223 CGSFVVQKFLKYQN--AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH 280
S V++K ++ + ++EE+L ++ ++ D + NYV+QTA+ R
Sbjct: 856 FSSNVIEKCIRTADNQCRAALIEEMLVPSELEKMLRDSFANYVVQTAMDFADPDSR---- 911
Query: 281 QRLVTKLQQHLAALRVMKYG 300
+L+ ++ L A+R +G
Sbjct: 912 NKLIDAIRPILPAIRQTPHG 931
>gi|449300578|gb|EMC96590.1| hypothetical protein BAUCODRAFT_24332 [Baudoinia compniacensis UAMH
10762]
Length = 1160
Score = 107 bits (268), Expect = 5e-21, Method: Composition-based stats.
Identities = 77/310 (24%), Positives = 152/310 (49%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL ++ +F + ELM+ +G ++ K +E C + + +++
Sbjct: 727 QHGCRYLQRKLDERADNAVEIVFVEIKDHIIELMTDPFGNYLCQKLLE-CTDDEQRTVLI 785
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K + + ++++ G+ +++K+I+ ++ +P + ++ AL+ L+ G+ VI
Sbjct: 786 KNSASSMTKI--ALNQHGTRALQKMIEYIS-TPQQIQIIIEALRYDVVLLIQDLNGNHVI 842
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ + +C+ + H GC L ID+ G ++ ++ + NA
Sbjct: 843 QKCLNHLSPENAQFIFDSVGTNCIAVGTHRHGCCVLQRCIDHASGLQKGALVDQVINNAF 902
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+L + GNYVVQ++L+L +P + +C + LS K S VV+K ++ N
Sbjct: 903 ALVQDPFGNYVVQYILDLGEPCFTEPLCQSFAHQVAYLSKQKFSSNVVEKCIRCATGNVR 962
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTA-----------LVETMRQDRLSVH-----QR 282
++ E+ ++ + D + NYV+QTA L+E +R S+ +R
Sbjct: 963 RAVILEIAEPRELAMLLRDSFANYVVQTAMDFADEETKNLLMENVRPILPSIRHTPYGRR 1022
Query: 283 LVTKLQQHLA 292
+ TKLQ++ A
Sbjct: 1023 IATKLQEYDA 1032
>gi|297852018|ref|XP_002893890.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
gi|297339732|gb|EFH70149.1| hypothetical protein ARALYDRAFT_473696 [Arabidopsis lyrata subsp.
lyrata]
Length = 565
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 145/298 (48%), Gaps = 9/298 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G +F + EL +G ++ K +E +E Q LI+ +
Sbjct: 264 GCRVLQKLVEEGTVLDAKVIFHEIIDHVVELSMDPFGNYIVQKLLEVSDEEQRTLIVSVL 323
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + + + ++ +G+ V+K+I+ V ++ + V LK F L+ G+ VI
Sbjct: 324 TSKPRELIQICLNTYGTRVVQKMIETV-KTKQQIALVKFGLKPGFLALVKDLNGNHVIQS 382
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ + N F+ +AA ++C +A H GC L + N G +R++++ IS NA L
Sbjct: 383 CLQTLGPNDNKFVLEAATKYCAEIAIHRHGCCVLQCCLSNSVGLQRERLVAEISRNALHL 442
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-KYQNAVHYI 241
S+ GNYVVQ++ +E + R HY +L+ K S V++K L KY + I
Sbjct: 443 SQDPFGNYVVQYL--IEQQVSAVKLLVRFRMHYAELATQKFSSHVIEKCLRKYPESRAEI 500
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
V EL+ + D Y NYVIQTAL T + V +LV K+ + LR Y
Sbjct: 501 VRELICVPNFEYLLQDPYANYVIQTALSVT----KGPVRAKLVEKVYR-FGKLRSSPY 553
>gi|15238618|ref|NP_200819.1| pumilio 18 [Arabidopsis thaliana]
gi|75335543|sp|Q9LVG3.1|PUM18_ARATH RecName: Full=Pumilio homolog 18; Short=APUM-18; Short=AtPUM18
gi|8777350|dbj|BAA96940.1| unnamed protein product [Arabidopsis thaliana]
gi|67633898|gb|AAY78873.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332009896|gb|AED97279.1| pumilio 18 [Arabidopsis thaliana]
Length = 327
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/275 (32%), Positives = 144/275 (52%), Gaps = 8/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ G F + I + ++++L + +T F+ KFGS V+KL+
Sbjct: 46 FNLMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL---G 102
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+S + +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 103 KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 162
Query: 151 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I + R Q+L L++ NA LS SGN+VVQHVL L D I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 222
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L G ++LS K GS++V+K L+ + ++ +V ELL + D+++++A +++GN+V+ A
Sbjct: 223 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T + R+ + LV KL + LR +GSN
Sbjct: 283 LRFT-KMSRMDLFWGLVQKLMPFIRLLR-RSHGSN 315
>gi|297796877|ref|XP_002866323.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
gi|297312158|gb|EFH42582.1| hypothetical protein ARALYDRAFT_919157 [Arabidopsis lyrata subsp.
lyrata]
Length = 324
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 7/244 (2%)
Query: 29 FTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV 88
+ F M+ F + I + L + +T F++ + +++GS S+++L+ +
Sbjct: 39 WMFNFMTRSEDVPRFKELISVLDTRTLMWMASSLTSDSNYFMVIARNQYGSKSIQRLMGM 98
Query: 89 VAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLAC 148
+ A+ RLF ++M K S V +K + K + +Y+ L++ LYLA
Sbjct: 99 SDDVDVFFFE---AIMRLFLYVMTDKYASYVAIKGMRVFQQDKRELMYEHILQNALYLAR 155
Query: 149 HEQGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAI 207
+ GCI LN I ++ R Q+L +++ NA LS GN+VVQHVL L D I
Sbjct: 156 DQHGCIALNEIITDLDDPYYRNQLLDIVANNALLLSNDAYGNFVVQHVLKLRDFRCTRNI 215
Query: 208 CFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-HYIVEELL--NSDQILQVASDKYGNYVI 264
L GH V+LS K GS++V++ L+ ++V +V +LL + ++++A +YGN+V+
Sbjct: 216 ADNLCGHCVELSFKKYGSYIVERLLEVGDSVMELVVMDLLACKREMLMRLARSEYGNFVV 275
Query: 265 QTAL 268
AL
Sbjct: 276 YNAL 279
>gi|401406880|ref|XP_003882889.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
gi|325117305|emb|CBZ52857.1| hypothetical protein NCLIV_026460 [Neospora caninum Liverpool]
Length = 1537
Score = 107 bits (267), Expect = 6e-21, Method: Composition-based stats.
Identities = 90/305 (29%), Positives = 146/305 (47%), Gaps = 13/305 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ KLS + ++ + V L+ +G ++ K +E C E QL ++ KI
Sbjct: 1102 GCRMLQRKLSDANPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEQCEEPQLLQLVRKI 1161
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSP---PLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + + G+ +V+KLI+V A P +++AL+ L + V
Sbjct: 1162 RPR---LVDICLSPHGTRAVQKLIEVCAGLPINSTATNELLAALRPSIVLLAKDVNANHV 1218
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ K L + +F++ +HC+ ++ GC + ID + +IL I+ NA
Sbjct: 1219 VQKILSSFPAARCEFVFAQVKKHCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANA 1278
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNA 237
L + GNYVVQ+VL+L+ A+ ALRGH +LS+ K S VV+K L
Sbjct: 1279 LELMQDAFGNYVVQYVLDLQIDGFNGAVTGALRGHIRELSMQKFSSNVVEKCLMLGTPEQ 1338
Query: 238 VHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
IV+ELL + L+ + D Y NYVIQ AL + + Q+L+ +Q L+ LR
Sbjct: 1339 RSLIVDELLADGEGLKDMLLDSYANYVIQRALTVSSP----AAQQQLLLVIQPCLSQLRQ 1394
Query: 297 MKYGS 301
+ GS
Sbjct: 1395 TQPGS 1399
>gi|356518120|ref|XP_003527730.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like [Glycine
max]
Length = 508
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 126/240 (52%), Gaps = 5/240 (2%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLI-KVVA 90
+LM +G +V + +E C E QL+ I+L + + + + G V+KL+ +V
Sbjct: 224 DLMVDPFGNYVVQRMVEICTEEQLSQIVLSLAQCNFQLVRICLSAHGIRGVEKLLERVTT 283
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
Q L V+SAL L G V+L CL+ N+ + C +A +
Sbjct: 284 QEQRDL--VLSALCPGAAILAKDVNGHRVLLHCLKQFSGEDNENLLNVVANKCFEIATDK 341
Query: 151 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
GC+ L I++ +G ++++L I ++ + L+ GNYVVQH+L+L+ P + +++
Sbjct: 342 TGCVVLQQCINHAQGETKQKLLDAIILHVSLLAEDCYGNYVVQHLLSLKVPGVAESLLIQ 401
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTAL 268
L+G + L+ K GS VV++FL+ H IV ELL++ + + D YGNYVI++AL
Sbjct: 402 LKGRFFYLACNKYGSNVVERFLQDSGEKHSTSIVLELLHNPNVAMLLVDPYGNYVIKSAL 461
>gi|413956754|gb|AFW89403.1| hypothetical protein ZEAMMB73_540172 [Zea mays]
Length = 676
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 153/306 (50%), Gaps = 13/306 (4%)
Query: 5 QYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT- 63
+YLQ+KL G + D +F + +LM +G ++ + +E C+E Q+ IIL +T
Sbjct: 372 RYLQDKLLEGKHHV-DVIFEGIINHIADLMISSFGNYLAQEIVEVCDEGQMLRIILVLTQ 430
Query: 64 FQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKC 123
+ + + S++ G+ V+KLI+ V+ ++ ++SAL+ F L+ G VI +C
Sbjct: 431 YPLKQLIAVSLNTHGTRVVQKLIEKVSSREQIML-IISALQPSFMLLVNDHNGHHVIQRC 489
Query: 124 LEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLS 183
L N FI++ A +CL +A H GC L + I +G ++ I ++ L+
Sbjct: 490 LVNFGVEDNKFIFEGAAANCLNMAVHCHGCFVLQSCI-KARGRYLANLIMEICLHGFELA 548
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYI 241
+ GNYVVQ VL E P + G YV LS + S VV+K L + +A I
Sbjct: 549 QDPFGNYVVQCVLEQEIPSANAHLASLFEGKYVYLSKQQGSSNVVEKCLMFFPDDAKAVI 608
Query: 242 VEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
++EL L+ Q+ D++ NYV +TAL T R ++ LV + + A+R Y
Sbjct: 609 IQELLMLSGSDFEQLLQDRFANYVFRTALDHT----RGRLYDVLVEAILPYENAIRNSPY 664
Query: 300 GSNKEI 305
NK I
Sbjct: 665 -CNKRI 669
>gi|118425863|gb|ABK90830.1| pumilio-family RNA binding protein [Hortaea werneckii]
Length = 457
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 155/311 (49%), Gaps = 14/311 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ-LALII 59
+ G + LQ KL D +F V ELM+ +G ++ K + N+ Q ALI
Sbjct: 32 QHGCRSLQRKLDERDEPTTHTIFNEVKDHIIELMTDPFGNYLCQKLLGGTNDEQRTALIR 91
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ ++ L ++ G+ +++K+I+ ++ +P ++ AL+ L+ G+ V
Sbjct: 92 NAMPAMTKIAL----NQHGTRALQKMIEFIS-TPEQTSMIIDALRYDVVQLIQDLNGNHV 146
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I CL + FI+ A +C+ + H GC L ID+ G ++ +++ + NA
Sbjct: 147 IQNCLNHLSSEDAQFIFDAVGANCVTVGTHRHGCCVLQRCIDHASGLQKGRLVDQVIHNA 206
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
SL + GNYVVQ++L+L +P + +C + + + V LS K S VV+K ++ A
Sbjct: 207 FSLVQDPFGNYVVQYILDLGEPAFTEPLCKSFQKNVVFLSKQKFSSNVVEKCIRCAGAET 266
Query: 239 -HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
++ E++ ++ ++ D + NYV+QTA+ + +D + L+ ++ + A+R
Sbjct: 267 KRMLIAEIVAPTELEKLLRDSFANYVVQTAM-DFADEDTKPI---LMGNIRPMVPAIRST 322
Query: 298 KYGSNKEIQKK 308
YG + IQ K
Sbjct: 323 PYG--RRIQTK 331
>gi|403362771|gb|EJY81119.1| RNA-binding protein, putative [Oxytricha trifallax]
Length = 1066
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 137/268 (51%), Gaps = 6/268 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ K+ + ++DK+F +LM+ +G ++ K E+ E QL II K+
Sbjct: 544 GCRFLQRKIEENNREVVDKIFRHTIENFMDLMNDPFGNYLAQKLTETVREDQLTEIIHKV 603
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+D + L + G+ S++K+I+ V +SP + + + LK + L G+ VI K
Sbjct: 604 Q-EDPVGLCR--NSHGTRSIQKIIETV-KSPAQIELLANYLKEKVQELAEDINGNHVIQK 659
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
L +N FIY A +E C+ +ACH+ GC + ID ++ ++ I +
Sbjct: 660 ILFTWKPAQNQFIYNAMMEKCVEIACHKHGCCVMQKCIDGATPQQKLELTLRIGDHTQVF 719
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAVHY 240
R+ GNYVVQ+VL L+ + I L G + L + K S V++K L++ N
Sbjct: 720 VRNPYGNYVVQYVLELKMVEVNQRIGEKLLGSLLLLGMEKFSSNVIEKCLEHNATNVKEA 779
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTAL 268
+V E+L +D D+YGNYVIQ +L
Sbjct: 780 MVREILQADSFYDFLLDQYGNYVIQKSL 807
>gi|297852022|ref|XP_002893892.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
gi|297339734|gb|EFH70151.1| hypothetical protein ARALYDRAFT_891233 [Arabidopsis lyrata subsp.
lyrata]
Length = 555
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 4/270 (1%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ + G +F + EL +G ++ K ++ +E Q +I+ +
Sbjct: 231 GCRVLQKLVKEGTILEAKVIFHEIIDHVVELSMDPFGNYIVQKLLDVSDEEQRTMIVSVL 290
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T + + ++ +G+ V+K+IK V ++ + V S LK F L+ GS V+
Sbjct: 291 TLTPRELIKICLNTYGTRVVQKMIKTV-KTKQQIALVKSGLKPGFLALVNDLNGSHVLQS 349
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CLE + F+ +AA ++C +A H GC L + N G + +++ I N+ L
Sbjct: 350 CLEFLGPNDTKFVLEAATKYCAEIATHRHGCRVLQCCLINTVGPQNDRLVAEILRNSHHL 409
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-KYQNAVHYI 241
S+ GNYVVQ + +E + R HY +L+ K S V++K L KY + I
Sbjct: 410 SQDPFGNYVVQCL--IEQQVSAVNLLVQFRTHYAELATQKFSSHVIEKCLRKYPESRAEI 467
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVET 271
V ELL+ Q+ D YGNYVIQTAL T
Sbjct: 468 VRELLSIPNFEQLLQDPYGNYVIQTALSVT 497
>gi|449018917|dbj|BAM82319.1| probable serine rich pumilio family rna binding domain pr otein
[Cyanidioschyzon merolae strain 10D]
Length = 910
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 145/329 (44%), Gaps = 33/329 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++G +YLQ +L ++ +F EL +G ++ K E CN Q +I
Sbjct: 573 QQGGRYLQARLDVKNAADTALIFEECRPHFVELAMDPFGNYLCQKLFEHCNREQRLELIR 632
Query: 61 KITFQDQLFLLASV--DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ Q LA V D G+ V+K+I++ + P + A+ LM G+
Sbjct: 633 QSASQ-----LAQVCMDPHGTRVVQKMIELTVE-PEHAALIAQAISPHCLSLMCDVNGNH 686
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI +CL+ FIY AL L +A H GC L +D+ +R + LI +
Sbjct: 687 VIQRCLQRMDVPLRRFIYDTALTRYLEIARHRHGCCVLQRCLDHATAEQRSNLCALILNS 746
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA- 237
A L + GNYVVQ+VL L++P AI +RGH LS+ K S VV+K N
Sbjct: 747 AYELMQDPFGNYVVQYVLELKEPSYTRAIIQRIRGHLWQLSMQKFSSNVVEKVFTMANER 806
Query: 238 -VHYIVEELLNSDQ-----ILQVAS------------DKYGNYVIQTALVETMRQDRLSV 279
+ ++ ELL Q LQV S D Y NYV+Q AL V
Sbjct: 807 DLRSLLHELLEGPQSVESMPLQVGSEQHQRNIRPLLFDPYANYVVQRALSLAPS----PV 862
Query: 280 HQRLVTKLQQHLAALRVMKYGSNKEIQKK 308
+ L +Q HLA LR +G K IQ +
Sbjct: 863 FEALREAIQPHLAELRGTPFG--KRIQAR 889
>gi|237831871|ref|XP_002365233.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211962897|gb|EEA98092.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
Length = 1618
Score = 105 bits (262), Expect = 3e-20, Method: Composition-based stats.
Identities = 89/305 (29%), Positives = 144/305 (47%), Gaps = 13/305 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ KLS ++ + V L+ +G ++ K +E C E QL ++ KI
Sbjct: 1123 GCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEPQLLQLVRKI 1182
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---LLYHVMSALKRLFKFLMMTKPGSSV 119
+ + + G+ +V+KLI+V A P +++AL+ L + V
Sbjct: 1183 RPR---LVDICLSPHGTRAVQKLIEVCAGLPAGSAATNELLAALRPSVVLLAKDVNANHV 1239
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ K L + DF++ ++C+ ++ GC + ID + +IL I+ NA
Sbjct: 1240 VQKILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANA 1299
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNA 237
L + GNYVVQ VL+L+ A+ A+RGH +LS+ K S VV+K L
Sbjct: 1300 LELMQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGTPEQ 1359
Query: 238 VHYIVEELL-NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+ IV+ELL D + + D Y NYVIQ AL + + Q+L+ +Q L+ LR
Sbjct: 1360 RNLIVDELLAEGDGLKDLLLDSYANYVIQRALTVSSP----AAQQQLLLAIQPCLSQLRQ 1415
Query: 297 MKYGS 301
+ GS
Sbjct: 1416 TQPGS 1420
>gi|374109827|gb|AEY98732.1| FAGL086Cp [Ashbya gossypii FDAG1]
Length = 735
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 17/278 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L +F + ELM+ +G ++ K +E + Q I L
Sbjct: 423 QHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAEQR--ITL 480
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA---QSPPLLYHVMSALKRLFKFLMMTKPGS 117
+ DQ F+ ++D G+ +++KL++ ++ +S ++ + +++ +L K L G+
Sbjct: 481 VKSSADQ-FVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSVVQLSKDLN----GN 535
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KCL+ + + FI+ AA C+ +A H GC L +D +R Q+ +
Sbjct: 536 HVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQVLA 595
Query: 178 NAASLSRHRSGNYVVQHVLN----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
N +L+ GNYVVQ++L L P I L+ ++LSL K GS VV+K L+
Sbjct: 596 NVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEKILR 655
Query: 234 YQNAVHYIVEELLNS---DQILQVASDKYGNYVIQTAL 268
++ ELL + + Q+ D +GNYV+QTAL
Sbjct: 656 TSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTAL 693
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 182 LSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--- 234
LS+ +GN+VVQ L + + F+ DA C V ++ + G V+Q+ L Y
Sbjct: 528 LSKDLNGNHVVQKCLQKFSSADSQFIFDAAC----ADCVKIATHRHGCCVLQRCLDYGSD 583
Query: 235 QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
Q + L N D + D +GNYV+Q L + + ++V L+ + L
Sbjct: 584 QQRDQLCAQVLANVDALTL---DPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIEL 640
Query: 295 RVMKYGSN 302
+ K+GSN
Sbjct: 641 SLHKFGSN 648
>gi|302309271|ref|NP_986580.2| AGL086Cp [Ashbya gossypii ATCC 10895]
gi|299788279|gb|AAS54404.2| AGL086Cp [Ashbya gossypii ATCC 10895]
Length = 735
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 139/278 (50%), Gaps = 17/278 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L +F + ELM+ +G ++ K +E + Q I L
Sbjct: 423 QHGCRFLQRQLDVAGPDAATSIFEETKPYVVELMTDSFGNYLIQKLVERVSAEQR--ITL 480
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA---QSPPLLYHVMSALKRLFKFLMMTKPGS 117
+ DQ F+ ++D G+ +++KL++ ++ +S ++ + +++ +L K L G+
Sbjct: 481 VKSSADQ-FVSIALDPHGTRALQKLVECISTEEESRIIIASLKNSVVQLSKDLN----GN 535
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KCL+ + + FI+ AA C+ +A H GC L +D +R Q+ +
Sbjct: 536 HVVQKCLQKFSSADSQFIFDAACADCVKIATHRHGCCVLQRCLDYGSDQQRDQLCAQVLA 595
Query: 178 NAASLSRHRSGNYVVQHVLN----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
N +L+ GNYVVQ++L L P I L+ ++LSL K GS VV+K L+
Sbjct: 596 NVDALTLDPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIELSLHKFGSNVVEKILR 655
Query: 234 YQNAVHYIVEELLNS---DQILQVASDKYGNYVIQTAL 268
++ ELL + + Q+ D +GNYV+QTAL
Sbjct: 656 TSAVAELMISELLATGGQPGVEQLLHDGFGNYVLQTAL 693
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 182 LSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--- 234
LS+ +GN+VVQ L + + F+ DA C V ++ + G V+Q+ L Y
Sbjct: 528 LSKDLNGNHVVQKCLQKFSSADSQFIFDAAC----ADCVKIATHRHGCCVLQRCLDYGSD 583
Query: 235 QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
Q + L N D + D +GNYV+Q L + + ++V L+ + L
Sbjct: 584 QQRDQLCAQVLANVDALTL---DPFGNYVVQYILTKEAELPPPTYTTKIVDTLKPRVIEL 640
Query: 295 RVMKYGSN 302
+ K+GSN
Sbjct: 641 SLHKFGSN 648
>gi|159471610|ref|XP_001693949.1| puf protein [Chlamydomonas reinhardtii]
gi|158277116|gb|EDP02885.1| puf protein [Chlamydomonas reinhardtii]
Length = 273
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 138/271 (50%), Gaps = 13/271 (4%)
Query: 34 MSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLA-SVDKFGSSSVKKLIKVVAQS 92
M +G ++ K ++ C+E Q L+++ + L++ +++ G+ +V+KLI+ ++
Sbjct: 1 MVDPFGNYLVQKLLDRCSEQQR----LEVSGDRRGELVSVALNTHGTRAVQKLIETLSSR 56
Query: 93 PPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQG 152
+ AL+ L+ G+ V+ +CL+ + FIY AA+ C+ +A H G
Sbjct: 57 EQRAI-AIEALRPGVVSLIKDLNGNHVVQRCLQRLGPEDSQFIYDAAVACCVEVATHRHG 115
Query: 153 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALR 212
C L ID +++ ++ ++ +A LS+ GNYVVQ+VL L A+ ALR
Sbjct: 116 CCVLQRCIDFATPGQKQALVMEVARHALVLSQDAFGNYVVQYVLELGHLDSCAAVVVALR 175
Query: 213 GHYVDLSLTKCGSFVVQKFLKYQN---AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
G + LSL K S VV++ LK IV EL+ + + ++ D YGNYVIQ+AL
Sbjct: 176 GSFCSLSLQKFSSNVVERCLKLGGLDAERELIVRELIQPNNLSRLLQDGYGNYVIQSALS 235
Query: 270 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
T + H LV ++ +L LR +G
Sbjct: 236 VTSG----TTHGLLVEAIKPYLPTLRGTPHG 262
>gi|344300994|gb|EGW31306.1| hypothetical protein SPAPADRAFT_61876 [Spathaspora passalidarum
NRRL Y-27907]
Length = 465
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 146/290 (50%), Gaps = 10/290 (3%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ +L G + I+ F + ELM +G ++ K E Q ++
Sbjct: 163 QHGCRFLQRQLELDEGAATII---FQEIYFKIVELMIDPFGNYLIQKLFEHITVEQRIVL 219
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + + F+ S+D G+ +++KLI+ ++ + ++ AL+ L G+
Sbjct: 220 VKNASGE---FMKISMDPHGTRALQKLIECISTAEESKL-IIEALQPHIVILSRDLNGNH 275
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ KCL+ N FI+ A +CL +A H GC L +D+ +R+Q+ I+ N
Sbjct: 276 VVQKCLQNLKTSDNQFIFDAVCANCLAIATHRHGCCVLQRCLDHGDPLQRQQLSLKIAEN 335
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L+ GNYVVQ+VL+ D I+ I ++ + + LSL K GS V++K L+
Sbjct: 336 ATKLAIDPFGNYVVQYVLSHGDDKSIEIILNHIKSNTIALSLHKFGSNVIEKSLRINKLS 395
Query: 239 HYIVEE-LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ ++E LLN + ++ +D +GNYV+QT+L D + Q L+ L
Sbjct: 396 NQLIEVLLLNESRFEELLNDGFGNYVLQTSLDVASPTDLARLSQSLIPLL 445
>gi|224056214|ref|XP_002298759.1| predicted protein [Populus trichocarpa]
gi|222846017|gb|EEE83564.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 130/265 (49%), Gaps = 5/265 (1%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQ L +++ +F V + +LM Q+G V K E C+E+Q+ +IL +
Sbjct: 310 LQGVLDERKPDLIEMIFLEVKDYVHDLMEDQFGNHVIQKLFEVCSEAQMTQLILSLIHNQ 369
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
+ L G+ +++K+I+ + ++P + L R L + G VI KCLE
Sbjct: 370 RRLLGLCFHLVGTRAMQKMIEHI-KTPKQRLLLTQVLIRRTVILSQNQNGYHVIQKCLEH 428
Query: 127 -SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
++ I + A E L +A + GC LN +D +G + +L NA LS
Sbjct: 429 FPFDDIKPLIKEIA-ESFLDIAMDKSGCCVLNRALDCAQGELKHLLLLETIANAMLLSES 487
Query: 186 RSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVE 243
GNYVVQHVL+ I L+G++V LS+ K GS VV+K L + + I+E
Sbjct: 488 PYGNYVVQHVLDERIQHATIGILEKLKGYFVSLSMNKFGSNVVEKCLIWSGEENASMIIE 547
Query: 244 ELLNSDQILQVASDKYGNYVIQTAL 268
E ++S + + + +GNYV+Q AL
Sbjct: 548 EFMHSPYFVNICRNNFGNYVVQKAL 572
>gi|15220219|ref|NP_174813.1| protein pumilio 10 [Arabidopsis thaliana]
gi|313471421|sp|Q9LP21.2|PUM10_ARATH RecName: Full=Putative pumilio homolog 10; Short=APUM-10;
Short=AtPUM10
gi|332193706|gb|AEE31827.1| protein pumilio 10 [Arabidopsis thaliana]
Length = 528
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 14/291 (4%)
Query: 3 GSQYLQEKLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
G + LQ+ + G DS+++ F + EL G ++ K + +E Q +I+
Sbjct: 227 GCRALQKLVEEGTVLDSKVI---FLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIV 283
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+T + + + ++ G+ ++K+IK V ++ + V SAL+ F L+ G V
Sbjct: 284 SVLTSKPRELIKICLNTNGTRVIQKMIKTV-KTKQQIALVKSALEPGFLVLVNDSNGYHV 342
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ CLE + N F+ +AA E+C LA H+ GC L + N G + ++++ IS ++
Sbjct: 343 LQSCLEFLVPNDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGLQHERLVAEISRDS 402
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-KYQNAV 238
LS+ GNYVVQ +++ + + + R H ++L+ K S V++K L KY +
Sbjct: 403 LRLSQDPFGNYVVQCLIDQQVSSV--NLLLPFRTHCIELATQKFSSHVIEKCLRKYPESR 460
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
IV ELL+ Q+ D Y NYVIQTAL T + +V RLV K+++
Sbjct: 461 AEIVRELLSYPNFEQLLQDPYANYVIQTALSVT----KGAVRARLVEKVKR 507
>gi|255715081|ref|XP_002553822.1| KLTH0E07876p [Lachancea thermotolerans]
gi|238935204|emb|CAR23385.1| KLTH0E07876p [Lachancea thermotolerans CBS 6340]
Length = 710
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 150/308 (48%), Gaps = 13/308 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L G + ++ + ELM+ +G ++ K +E + Q ++
Sbjct: 398 QHGCRFLQRQLDIGGCNAANSIYLETRDYVVELMTDSFGNYLIQKLLERVTDDQRLELVR 457
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q F+ ++D G+ +++KL++ ++ V+ +L+ L G+ V+
Sbjct: 458 SSA---QSFVYIALDPHGTRALQKLVECISTEEEAGI-VVDSLRGSIVELSRDLNGNHVV 513
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ AA+E C+ +A H GC L +D+ + +Q+ I +
Sbjct: 514 QKCLQKLKPEDFQFIFDAAIESCVKIATHRHGCCVLQRCLDHGSKEQFQQLCEEIIAHVD 573
Query: 181 SLSRHRSGNYVVQHVLNLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ++L + + I L+ ++LSL K GS VV+K L+
Sbjct: 574 ELATDPFGNYVVQYILTKQTERSASEYTNRIVNILKPKIIELSLHKFGSNVVEKVLRTPV 633
Query: 237 AVHYIVEELLN---SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL-A 292
++ ELLN +I Q+ D YGNYV+QTAL + R++ ++QRL L+ L
Sbjct: 634 VSELMITELLNRSGDSKIDQLLHDGYGNYVLQTAL-DIARENNKYLYQRLSDTLKPLLVG 692
Query: 293 ALRVMKYG 300
+R +G
Sbjct: 693 PVRNTPHG 700
>gi|15238635|ref|NP_200826.1| pumilio 19 [Arabidopsis thaliana]
gi|313471418|sp|Q9LSS8.2|PUM19_ARATH RecName: Full=Putative pumilio homolog 19; Short=APUM-19;
Short=AtPUM19
gi|332009907|gb|AED97290.1| pumilio 19 [Arabidopsis thaliana]
Length = 327
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 143/275 (52%), Gaps = 8/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ G F + I ++++L + +T F+ KFGS V+KL+
Sbjct: 46 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL---G 102
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+S + +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 103 KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 162
Query: 151 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I + R Q+L L+ NA LS SGN+VVQHVL L D I I
Sbjct: 163 HGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 222
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L G ++LS K GS++V+K L+ + ++ +V ELL + D+++++A +++GN+V+ A
Sbjct: 223 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T ++ R+ + LV KL + LR +G+N
Sbjct: 283 LRFT-KEMRMDLFWGLVQKLMPFIHLLR-RSHGNN 315
>gi|8885569|dbj|BAA97499.1| unnamed protein product [Arabidopsis thaliana]
Length = 315
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 143/275 (52%), Gaps = 8/275 (2%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
F LM+ G F + I ++++L + +T F+ KFGS V+KL+
Sbjct: 34 FNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLL---G 90
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+S + +A+ R F + K S V ++ + +Y+ L H L LAC +
Sbjct: 91 KSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQ 150
Query: 151 QGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GCI LN+ I + R Q+L L+ NA LS SGN+VVQHVL L D I I
Sbjct: 151 HGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAV 210
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTA 267
L G ++LS K GS++V+K L+ + ++ +V ELL + D+++++A +++GN+V+ A
Sbjct: 211 NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 270
Query: 268 LVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L T ++ R+ + LV KL + LR +G+N
Sbjct: 271 LRFT-KEMRMDLFWGLVQKLMPFIHLLR-RSHGNN 303
>gi|403224139|dbj|BAM42269.1| RNA-binding protein Puf1 [Theileria orientalis strain Shintoku]
Length = 700
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 142/304 (46%), Gaps = 13/304 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ +L D + + + V + LM+ +G ++ K + C+ QL II
Sbjct: 231 QTGCRMLQRQLECNDHQFIASVLNEVLDNLYMLMTDPFGNYLCQKLMSVCDSDQLGKIIT 290
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q F+ ++ G+ +++KLI+VV + + + S L L+ G+ VI
Sbjct: 291 SCEPQ---FISICLNMHGTRAIQKLIEVVTEEN--ITRITSILSTGVVDLVNDLNGNHVI 345
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + DFIY+A E+C+YLA H GC + ID ++R +++ IS
Sbjct: 346 QKCLVSLSSEHCDFIYKAMNENCVYLATHRHGCCVMQRCIDAASPAQRAKLIDTISSKTL 405
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L GNYV+Q+VL L+D + I L + K S VV++ L +
Sbjct: 406 ELVEDAYGNYVIQYVLRLKDDAINSRIVAFLCEDVTKFAKQKFSSNVVERCLIFCPLEVR 465
Query: 239 HYIVEELLNS--DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
++ + LN D + + D +GNYVIQ L + D L+ L+ +Q HL L+V
Sbjct: 466 STLISKFLNVPFDVLKDLILDPFGNYVIQRVL-NVAQPDELT---SLLDSIQPHLEELKV 521
Query: 297 MKYG 300
G
Sbjct: 522 ASSG 525
>gi|294654650|ref|XP_456710.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
gi|199429043|emb|CAG84666.2| DEHA2A08778p [Debaryomyces hansenii CBS767]
Length = 808
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 128/238 (53%), Gaps = 5/238 (2%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
ELM+ +G ++ K E+ + Q +++ + + F+ ++D G+ +++KLI+ +
Sbjct: 536 ELMTDPFGNYLIQKLFENVSADQRIILVKNASPE---FIRIALDPHGTRALQKLIECITT 592
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
+ S R+ L G+ V+ KCL+ +N FI++ A HC +A H
Sbjct: 593 EEESRLIINSLSPRIVA-LSRDLNGNHVVQKCLQRLKPEENQFIFETASLHCNEIATHRH 651
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC L +D+ ++RKQ+ ++ NA +LS GNYVVQ+VL+ D I I +
Sbjct: 652 GCCVLQRCLDHGNLAQRKQLSLKVAENATNLSLDPFGNYVVQYVLSRGDDESIRIILDHI 711
Query: 212 RGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEE-LLNSDQILQVASDKYGNYVIQTAL 268
+ + V LSL K GS V++K L+ +++ LLN ++ ++ +D +GNYV+QT+L
Sbjct: 712 KANVVSLSLHKFGSNVIEKSLRINKLTDSLIDVLLLNKERFSEMLNDAFGNYVLQTSL 769
>gi|156095470|ref|XP_001613770.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148802644|gb|EDL44043.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 1542
Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 12/304 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ L + R + +++ ELM +G ++ K +E C Q+ II
Sbjct: 649 QTGCRILQRILERKNPRHVQEIYREALDNIVELMVDPFGNYLCQKLMEVCTSEQIERIID 708
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
DQL + ASV G+ +V+KLI+++ ++P + AL+ L+ G+ V+
Sbjct: 709 AAA--DQL-VSASVSVHGTRTVQKLIEMI-RTPAQIAKATRALQNSVITLIKDINGNHVV 764
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL +H+ +FIY+A L +C+ ++ H GC + ID+ ++ + I+ +
Sbjct: 765 QKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVIQRCIDSANEQQKALFIRHITDHTL 824
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
L + GNYVVQ+VLNL + I L + +L+ K S VV+K L ++
Sbjct: 825 ELVQDAFGNYVVQYVLNLGREKVNLDIVHRLLPNLEELATQKFASNVVEKCLTIGSSRCR 884
Query: 239 HYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
++ ++L D + ++ D++GNYVIQ AL + L+ +LV ++ ++ LR
Sbjct: 885 KILINDILRRGKDSMKKLILDRFGNYVIQRAL-SVASEPELT---KLVEGIKPYIKELRN 940
Query: 297 MKYG 300
+ G
Sbjct: 941 ISSG 944
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRR 168
LM+ G+ + K +E + + + I AA + + + G + I+ ++ ++
Sbjct: 681 LMVDPFGNYLCQKLMEVCTSEQIERIIDAAADQLVSASVSVHGTRTVQKLIEMIRTPAQI 740
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
+ + + +L + +GN+VVQ L + I A+ + V++S + G V+
Sbjct: 741 AKATRALQNSVITLIKDINGNHVVQKCLVSLTSHQCEFIYKAILNNCVEVSTHRHGCCVI 800
Query: 229 QKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
Q+ + N + +D L++ D +GNYV+Q L + L + RL+ L+
Sbjct: 801 QRCIDSANEQQKALFIRHITDHTLELVQDAFGNYVVQYVLNLGREKVNLDIVHRLLPNLE 860
Query: 289 QHLAALRVMKYGSN 302
+ L K+ SN
Sbjct: 861 E----LATQKFASN 870
>gi|449710016|gb|EMD49164.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 476
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 24/315 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ +L + + +F + LMS +G ++ K IE N Q II KI
Sbjct: 164 GCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRIQIITKI 223
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T F + S + G+ S++KLI + + +L +V+S L+ G+ VI
Sbjct: 224 T---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIELIFDSNGNHVI 277
Query: 121 LKCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV- 177
+CL+ N FI+ A + + + +A H+ GC + ID R+Q++ LI
Sbjct: 278 QECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGNRQQLITLIDEI 334
Query: 178 --NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
N+ L + GNYVVQ++LN++ +I+ + L +DLS+ K S V++K ++
Sbjct: 335 VKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVIEKLVRSD 394
Query: 236 --NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
A I + L + ++ D Y NYVIQT L Q + H +L + HL+A
Sbjct: 395 EIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCL----DQSSVEYHSKLSNWIIPHLSA 450
Query: 294 LRVMKYGSNKEIQKK 308
+R Y K+IQ K
Sbjct: 451 IRNTPYY--KKIQNK 463
>gi|443921904|gb|ELU41432.1| pumilio-family RNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 1002
Score = 103 bits (257), Expect = 9e-20, Method: Composition-based stats.
Identities = 91/320 (28%), Positives = 143/320 (44%), Gaps = 46/320 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+KL G +G ++ K +E + Q +I
Sbjct: 579 QHGCRYLQKKLEEGVPE-----------------HHPFGNYLCQKLLEYSTDEQRNMICE 621
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA---QSPPLLY-----HVMSALKRLFKFLMM 112
+ + S++ G+ +V+K+I ++ Q+ P Y ++ AL L+
Sbjct: 622 SVAHD---LVGISLNMHGTRAVQKMIDFLSTQRQANPSSYDAQIHSIIMALSMHVVTLIK 678
Query: 113 TKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI KCL N FIY A HC+ +A H GC L ID+ S+R Q++
Sbjct: 679 DLNGNHVIQKCLNRLIPEDNQFIYNAVAAHCVEVATHRHGCCVLQRCIDHASDSQRIQLV 738
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I+ NA +L + GNYV H DA+ G+ LS+ K S V++K +
Sbjct: 739 TEITFNALTLVQDPYGNYVSCHTSR------TDAVIRQFIGNVCALSVQKFSSNVIEKCI 792
Query: 233 KY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQ 288
+ N ++EELLN +++ ++ D +GNY +QTAL D QR LV ++
Sbjct: 793 RVAEHNTRKMLIEELLNRNRLEKLLRDSFGNYCVQTAL------DYAEPTQRMLLVEGIR 846
Query: 289 QHLAALRVMKYGSNKEIQKK 308
L +R YG K IQ K
Sbjct: 847 PILPLIRNTPYG--KRIQSK 864
>gi|67481757|ref|XP_656228.1| pumilio domain-containing protein C6G9.14 [Entamoeba histolytica
HM-1:IMSS]
gi|56473414|gb|EAL50842.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 476
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 151/315 (47%), Gaps = 24/315 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ +L + + +F + LMS +G ++ K IE N Q II KI
Sbjct: 164 GCRYLQRQLEDNNPQTTKCIFEQMLPIITLLMSDPFGNYLCQKLIEVVNSEQRIQIITKI 223
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T F + S + G+ S++KLI + + +L +V+S L+ G+ VI
Sbjct: 224 T---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIELIFDSNGNHVI 277
Query: 121 LKCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV- 177
+CL+ N FI+ A + + + +A H+ GC + ID R+Q++ LI
Sbjct: 278 QECLKTFGKSDNRFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGNRQQLITLIDEI 334
Query: 178 --NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
N+ L + GNYVVQ++LN++ +I+ + L +DLS+ K S V++K ++
Sbjct: 335 VKNSLVLVKDAFGNYVVQYILNVDIVGVINDVTKMLLDDLIDLSMQKFSSNVIEKLVRSD 394
Query: 236 --NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
A I + L + ++ D Y NYVIQT L Q + H +L + HL+A
Sbjct: 395 EIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCL----DQSSVEYHSKLSNWIIPHLSA 450
Query: 294 LRVMKYGSNKEIQKK 308
+R Y K+IQ K
Sbjct: 451 IRNTPYY--KKIQNK 463
>gi|296809045|ref|XP_002844861.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
gi|238844344|gb|EEQ34006.1| pumilio-family RNA binding protein [Arthroderma otae CBS 113480]
Length = 1069
Score = 103 bits (257), Expect = 1e-19, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 23/287 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 635 QHGCRYLQRKLEEGIPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 693
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V++AL L+ G+ VI
Sbjct: 694 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVINALSGQVVELVQDLNGNHVI 750
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 751 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 810
Query: 181 SLSRHRSGNYVVQH-----------------VLNLEDPFLIDAICFALRGHYVDLSLTKC 223
SL + GNYV+Q+ +++L +P +C +G LS K
Sbjct: 811 SLVQDPFGNYVIQYICTFASLLLSYIIILTGIVDLGEPLFTGPLCATFQGSIPALSKQKF 870
Query: 224 GSFVVQKFLKYQ--NAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
S V++K ++ N ++E+L ++ + D + NYVIQTA+
Sbjct: 871 SSNVIEKCIRTSDFNMRRAFIKEMLLPHELPNMLRDSFANYVIQTAM 917
>gi|150863841|ref|XP_001382453.2| hypothetical protein PICST_66941 [Scheffersomyces stipitis CBS
6054]
gi|149385097|gb|ABN64424.2| RNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 794
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 141/277 (50%), Gaps = 23/277 (8%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
ELM+ +G ++ K E+ + Q +++ + F+ ++D G+ +++KL++ ++
Sbjct: 522 ELMTDPFGNYLIQKLFENVSVDQRIILVKNAAPE---FIRIALDPHGTRALQKLVECIST 578
Query: 92 SP-------PLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCL 144
L H++S + L G+ V+ KCL+ +N FI++ A HC
Sbjct: 579 EEESKLIIGSLSPHIVSLSRDLN--------GNHVVQKCLQKLKPEENQFIFETASLHCN 630
Query: 145 YLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLI 204
+A H GC L +D+ +R+Q+ ++ NA +LS GNYVVQ+VL+ D I
Sbjct: 631 EIATHRHGCCVLQRCLDHGNSDQRRQLSLKVAENATNLSLDPFGNYVVQYVLSRGDEGSI 690
Query: 205 DAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNYV 263
I ++ + + LSL K GS V++K L+ + +++ LL + D+ + +D +GNYV
Sbjct: 691 QIIMDHIKSNIISLSLHKFGSNVIEKSLRINKLTNTLIDVLLKHQDRFSDMLNDAFGNYV 750
Query: 264 IQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+QT+L QD S+ Q LQ L ++ +G
Sbjct: 751 LQTSLDVANPQDLNSLSQ----ALQPLLPNIKNTPHG 783
>gi|226287941|gb|EEH43454.1| pumilio domain-containing protein [Paracoccidioides brasiliensis
Pb18]
Length = 925
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 48/300 (16%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ+KL + + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 533 GCRYLQKKLEEQNPAHVQMIFLETHIHVVELMTDPFGNYLCQKLLEYSNDEQRTALI--- 589
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+++ +L+K+ L H AL+++ +F+ +
Sbjct: 590 ----------------NNAAPQLVKIA-----LNQHGTRALQKMIEFISTPE-------- 620
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
FIY A C+ + H GC L ID+ G +R +++ I+ NA +L
Sbjct: 621 ----------QFIYDAVGASCVPVGTHRHGCCVLQRCIDHASGDQRARLIEQITKNAFTL 670
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
+ GNYVVQ++L+L + I+ IC + RG+ LS K S V++K ++ +
Sbjct: 671 VQDPFGNYVVQYILDLNERHFIEPICRSFRGNIPALSKQKFSSNVIEKCIRTADNQCRAA 730
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
++EE+L ++ ++ D + NYV+QTA+ R +L+ ++ L A+R +G
Sbjct: 731 LIEEMLVPSELEKMLRDSFANYVVQTAMDFADPDSR----NKLIDAIRPILPAIRQTPHG 786
>gi|315048481|ref|XP_003173615.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311341582|gb|EFR00785.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 1018
Score = 102 bits (254), Expect = 2e-19, Method: Composition-based stats.
Identities = 75/278 (26%), Positives = 133/278 (47%), Gaps = 15/278 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL G + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 597 QHGCRYLQRKLEEGVPEHVQIIFRETQMHVVELMTDPFGNYLCQKLLEFTNDEQRTGLI- 655
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++++ G+ +++K+I+ ++ +P + V+ AL L+ G+ VI
Sbjct: 656 --NIAAPHLVQIALNQHGTRALQKMIEFIS-TPEQIQTVIHALSGQVVELVQDLNGNHVI 712
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FIY A + C+ + H GC L ID+ G +R +++ I+ ++
Sbjct: 713 QKCLNRLSAPDAQFIYDAVGKECVAVGTHRHGCCVLQRCIDHASGDQRAKLIEQITKSSY 772
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSL--------TKCGSFVVQKFL 232
SL + GNYV+Q++ L I F L GH+ LS K S V++K +
Sbjct: 773 SLVQDPFGNYVIQYICRLTSSTWILESLF-LPGHFAQLSREASPALSKQKFSSNVIEKCI 831
Query: 233 KYQ--NAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
+ N ++E+L+ ++ + D + NYVIQTA+
Sbjct: 832 RTSDFNMRRAFIKEMLSPHELPNMLRDSFANYVIQTAM 869
>gi|50552736|ref|XP_503778.1| YALI0E10395p [Yarrowia lipolytica]
gi|49649647|emb|CAG79369.1| YALI0E10395p [Yarrowia lipolytica CLIB122]
Length = 566
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 24/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + L+ +F ELM+ +G ++ K +E+C+ +Q ++I
Sbjct: 267 QHGCRYLQRKLEE-EPYYLNLIFEQTHSHVVELMTDPFGNYLCQKLLENCSVAQTTVLIR 325
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L +A +++ G+ +++K+I V + ++ AL+R L+ G+ VI
Sbjct: 326 --TAAPSLVQVA-LNQHGTRALQKMIDYVTNDEQIEI-IVQALERNVVRLIQDLNGNHVI 381
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + +FIY+A ++ + +A H GC L +D +R+ ++ +I+ +A
Sbjct: 382 QKCLNRLNSCDTNFIYRAVSQNLVVVATHRHGCCVLQRCVDYADVLQREMLIGVITKHAL 441
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN---- 236
L GNYV Q+VL + + GH V LS+ K S V++K LK +
Sbjct: 442 QLVCDPFGNYVTQYVLG-------EQVIRQFVGHVVALSMQKFSSNVIEKSLKVASYELR 494
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
AV ++ E+ S + ++ SD YGNYV+QTAL + R +L+ +++ L +R
Sbjct: 495 AV--LIAEICASPLLPKLLSDCYGNYVVQTALDTANQYTRA----QLIDRIRPVLPMIRQ 548
Query: 297 MKYGSNKEIQKK 308
YG + IQ K
Sbjct: 549 TPYG--RRIQAK 558
>gi|406606752|emb|CCH41788.1| hypothetical protein BN7_1327 [Wickerhamomyces ciferrii]
Length = 743
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 150/274 (54%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ++L ++G S I+ F + ELM +G ++ K +E N+ Q +
Sbjct: 406 QHGCRFLQKQLDLNTGSSTII---FDEIHQHVIELMIDPFGNYLIQKLLEKVNDEQRITL 462
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVV---AQSPPLLYHVMSALKRLFKFLMMTKP 115
+ + Q F+ ++D G+ +++KL++ + ++ ++ + S + L + L
Sbjct: 463 VENASSQ---FVSIALDPHGTRALQKLVECINTQKEAEIIVESLSSDVVSLSRDLN---- 515
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KCL+ + FI+ AA E+C +A H GC L +D+ + +Q+ +I
Sbjct: 516 GNHVIQKCLQRLTPADSQFIFDAASENCSKIATHRHGCCVLQRCLDHGSKEQCEQLSLVI 575
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
S +A LS GNYVVQ+VL ++ I I +++ V LSL K GS V++K L+
Sbjct: 576 SKSAVDLSLDAFGNYVVQYVLAKDEKEAIAKIIDSVKTEIVKLSLHKFGSNVIEKCLRVS 635
Query: 236 NAVHYIVEELLNS-DQILQVASDKYGNYVIQTAL 268
+++E+L S D+++++ +D +GNYV+QT+L
Sbjct: 636 TLSKQLIDEILKSGDELVKLLNDPFGNYVLQTSL 669
>gi|102140025|gb|ABF70156.1| pumilio/Puf RNA-binding domain-containing protein [Musa acuminata]
Length = 1129
Score = 102 bits (253), Expect = 3e-19, Method: Composition-based stats.
Identities = 91/297 (30%), Positives = 140/297 (47%), Gaps = 17/297 (5%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGF----TFELMSGQYGRFVFGKFIESCNESQLALII 59
S+ QE L + I K V++GF +++M G K + ++ Q +
Sbjct: 799 SRCFQEFLDGREPEITQK---VLAGFLRCSVYDMMMDCRGSDFILKLLHVADDVQRRQME 855
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ ++ L + D GS VK+L+K+ L + V ALK K LM K G SV
Sbjct: 856 DYVRKDHRMLLKVAKDSSGSECVKELVKI------LKFPVGKALKCHVKQLMTCKNGKSV 909
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ CLE N QAAL+ LA + GC+ L + +D R +L + A
Sbjct: 910 VDCCLEHLNYEANKVFIQAALDSFTDLASDKCGCLALVSCMDYSTNPHRNLLLKKTTAGA 969
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+LS H GNYVVQ LN+ + + IC L G ++LS+ K GS+VVQ+ L+ + H
Sbjct: 970 LALSCHIYGNYVVQCALNMNVAWAAETICADLAGSLMELSVHKNGSYVVQRCLE-SSGRH 1028
Query: 240 YIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+I+ L L+ + + Y NYV++TAL + LS H + L+ L A+
Sbjct: 1029 HIIRGLDCLSQGDLEDMLQHYYANYVLKTALA-FFKVKPLSPHNPSLAPLKLSLTAI 1084
>gi|213405357|ref|XP_002173450.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
gi|212001497|gb|EEB07157.1| pumilio domain-containing protein [Schizosaccharomyces japonicus
yFS275]
Length = 532
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 139/269 (51%), Gaps = 8/269 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ L S D ++DK+F F LM +G ++ K E N+ Q + I
Sbjct: 226 GCRSLQRVLESNDPLVIDKIFRTTYEFIPNLMVDAFGNYLCQKLFEHANDFQRTAFVKVI 285
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + + S++ G+ +++K++++V+ P + V+ +L+ L+ G+ VI K
Sbjct: 286 SSK---LVPISLNMHGTRALQKVLELVSL-PEQIDCVVKSLQNNVVLLIKDLNGNHVIQK 341
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNAAS 181
CL + + FIY A + + ++ H GC + D+ ++R+ +LH+I V A
Sbjct: 342 CLNQFSSEDSQFIYSAICRNIVEVSTHRHGCCVVQRCFDHASPAQREMLVLHIIPV-ALE 400
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L + GNYVVQ+VL+L++P DA+ LS+ K S V++K L +
Sbjct: 401 LVQDAFGNYVVQYVLDLKEPVYTDAVIRKFLHKVRMLSVQKFSSNVMEKSLSMASDELRA 460
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTAL 268
+++ELL+ + ++ D++ NYV+QTAL
Sbjct: 461 LLIDELLDKKHLSRLLKDQFANYVVQTAL 489
>gi|221486916|gb|EEE25162.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 685
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 142/302 (47%), Gaps = 12/302 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ KLS ++ + V L+ +G ++ K +E C E QL ++ KI
Sbjct: 195 GCRMLQRKLSEASPEEVEAIRLEVLECVVVLLVDPFGNYLVQKVVEECEEPQLLQLVRKI 254
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + + G+ +V+KLI+ + +++AL+ L + V+ K
Sbjct: 255 RPR---LVDICLSPHGTRAVQKLIEPAGSA--ATNELLAALRPSVVLLAKDVNANHVVQK 309
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
L + DF++ ++C+ ++ GC + ID + +IL I+ NA L
Sbjct: 310 ILSSFPASRCDFVFAQVKKNCVEISTERHGCCVMQRCIDAAPPRAKSEILQEIAANALEL 369
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNAVHY 240
+ GNYVVQ VL+L+ A+ A+RGH +LS+ K S VV+K L +
Sbjct: 370 MQDAFGNYVVQCVLDLQIEGFNGAVAGAIRGHIRELSMQKFSSNVVEKCLVLGTPEQRNL 429
Query: 241 IVEELL-NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
IV+ELL D + + D Y NYVIQ AL + + Q+L+ +Q L+ LR +
Sbjct: 430 IVDELLAEGDGLKDLLLDSYANYVIQRALTVSS----PAAQQQLLLAIQPCLSQLRQTQP 485
Query: 300 GS 301
GS
Sbjct: 486 GS 487
>gi|358345510|ref|XP_003636820.1| Pumilio domain-containing protein [Medicago truncatula]
gi|358348879|ref|XP_003638469.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355502755|gb|AES83958.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355504404|gb|AES85607.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 679
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 133/270 (49%), Gaps = 7/270 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ LQE + + + F + ELM G V K +E CN+ Q I+L +
Sbjct: 225 GSKILQEVMENLGPEGVSYFFLELINHMCELMVDPIGYEVITKMVEVCNQDQKTQIVLLV 284
Query: 63 TFQDQLFLLASVDKFGSSSVKKLI-KVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
T F+ + GS SV+KL+ KV + L +MSAL L G V+
Sbjct: 285 THHGAQFIRICLSLHGSRSVEKLLEKVTTREQRGL--IMSALTPGAIVLSKDINGHRVVF 342
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS 181
CL+ + + + L L+ + GC L + + +G+ + ++H I ++A
Sbjct: 343 NCLKNFPHADTEKFLGVIARNSLSLSRDKTGCCVLQYCVSHAQGATKNLLIHEIILHAPL 402
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L+ GNYV+QH+++L+ P + + L+ +V LS K GS VV+KFL + + V
Sbjct: 403 LAEDCYGNYVIQHLISLKIPTVSGNLHHQLQQQFVSLSCNKYGSNVVEKFL-HDSGVDIS 461
Query: 241 --IVEELLNSDQILQVASDKYGNYVIQTAL 268
I+ ELLN + ++ +D YGN+VI TAL
Sbjct: 462 SCIIIELLNDPNVTRLLTDPYGNFVISTAL 491
>gi|164658049|ref|XP_001730150.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
gi|159104045|gb|EDP42936.1| hypothetical protein MGL_2532 [Malassezia globosa CBS 7966]
Length = 447
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 119/235 (50%), Gaps = 13/235 (5%)
Query: 78 GSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQ 137
G+ +V+K I ++ +P ++ A R L+ G+ VI KCL N FIY
Sbjct: 3 GTRAVQKTIDFIS-TPAQTQAIIDAFARNVVTLIKDLNGNHVIQKCLNRLPAGDNQFIYD 61
Query: 138 AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
A C+ +A H GC L ID+ S+R+Q+++ I++ + +L + GNYVVQ+VL+
Sbjct: 62 AVAAQCVDVATHRHGCCVLQRCIDHASESQRQQLVNEITMYSLTLVQDPFGNYVVQYVLD 121
Query: 198 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELLNSDQILQVA 255
L DP +++ GH LS K S V++K ++ H +V EL++ ++ +
Sbjct: 122 LNDPVSTESVTNQFLGHVFQLSTQKFSSNVIEKCIRVAEPPLRHKLVAELVDPSRLELLL 181
Query: 256 SDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSNKEIQKK 308
D + NYV+QT L D QR LV ++ L ++R YG K IQ K
Sbjct: 182 RDSFANYVVQTCL------DYAEPAQRTHLVECIRPILPSIRNTPYG--KRIQSK 228
>gi|357489397|ref|XP_003614986.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355516321|gb|AES97944.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 349
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 6/273 (2%)
Query: 19 LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFG 78
+D +F V G + + + +E + Q I+ K+T + AS+D +G
Sbjct: 18 IDTMFNEVIGDVVKQTLDPFMSNIVQHVLEFGRDDQRLKIVRKLTQHPDQLVEASLDSYG 77
Query: 79 SSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQA 138
+ V+KLI S + V +L F +L+M G+ V+ +CL N+FIY A
Sbjct: 78 TKCVQKLIST-HNSKKEIALVSYSLLSGFLYLVMDLDGNQVLQRCLSCWSVEDNEFIYDA 136
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL 198
A C +A E GC L I+ G+ +++++ I A L++H GN++VQ+++ +
Sbjct: 137 ATRFCYAVATDEHGCCLLQRCIEFSNGNSQQKLVKEICKYAFHLAQHEYGNHIVQYIIQM 196
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAVHYIVEELLNSDQILQVASD 257
++P I + G YV LS+ K VV+K L++ IV+E L + D
Sbjct: 197 QNPSAIAELTAQFNGKYVQLSMQKFSIHVVEKCLEHIVETRARIVQEFLAVPYFENLLQD 256
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
Y NYV+Q AL T S+H+ LV ++ H
Sbjct: 257 PYANYVVQCALKFT----EGSLHESLVETVRSH 285
>gi|167377764|ref|XP_001734530.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903897|gb|EDR29287.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 476
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 149/315 (47%), Gaps = 24/315 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ +L + + +F + LMS +G ++ K IE N Q II KI
Sbjct: 164 GCRYLQRQLEDNNPQTTKYIFEQMLPIITPLMSDPFGNYLCQKLIEVVNSEQRIQIIRKI 223
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T F + S + G+ S++KLI + + +L +V+S L+ G+ VI
Sbjct: 224 T---PTFFIISKNIHGTRSIQKLISCYSTKEEQNMLINVISPY---VIELIFDSNGNHVI 277
Query: 121 LKCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV- 177
+CL+ N FI+ + ++ + +A H+ GC + ID R+Q++ LI
Sbjct: 278 QECLKTFGKSDNGFIFDTIVNDDNLVKVATHKHGCCVVQRCID---YGNRQQLITLIDEI 334
Query: 178 --NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
N+ L + GNYVVQ++LN++ +I + L +DLS+ K S V++K ++
Sbjct: 335 VKNSLILVKDAFGNYVVQYILNVDIVGVIIDVTKMLLNDLIDLSMQKFSSNVIEKLIRSD 394
Query: 236 --NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
I ++ L + ++ D Y NYVIQT L Q + H +L + HL+
Sbjct: 395 EIEVRQMIFDKFLQIKDVTKLLQDSYANYVIQTCL----DQSSVEYHSKLSNWITPHLST 450
Query: 294 LRVMKYGSNKEIQKK 308
+R Y K+IQ K
Sbjct: 451 IRNTPYY--KKIQNK 463
>gi|190347187|gb|EDK39419.2| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 28/286 (9%)
Query: 1 EEGSQYLQEKLSSG-----------DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES 49
+ G ++LQ +L SG S + +F + +LM +G ++ K E
Sbjct: 407 QHGCRFLQRQLDSGGKENNGHGKEQSSVVATMIFNEIYLKIVDLMVDPFGNYLIQKLFEH 466
Query: 50 CNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMS----AL 103
+ Q +++ + F+ ++D G+ +++KL++ ++ + LL +S AL
Sbjct: 467 VSTDQRVILVKNAAPE---FMRIALDSHGTRALQKLVECISTEEESQLLIKSLSPHVVAL 523
Query: 104 KRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 163
R G+ V+ KCL+ N FI+ A HC +A H GC L +D+
Sbjct: 524 SRDLN-------GNHVVQKCLQRLSAANNQFIFDTAAFHCNEIATHRHGCCVLQRCLDHG 576
Query: 164 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKC 223
++R Q+ ++ NA +LS GNYVVQ+VL D I+ + +R + V LSL K
Sbjct: 577 TMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIEIVLSHIRNNIVTLSLHKF 636
Query: 224 GSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNYVIQTAL 268
GS V++K L+ ++E LL N + + +D YGNYV+QT+L
Sbjct: 637 GSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVLQTSL 682
>gi|146416333|ref|XP_001484136.1| hypothetical protein PGUG_03517 [Meyerozyma guilliermondii ATCC
6260]
Length = 721
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 124/244 (50%), Gaps = 17/244 (6%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA- 90
+LM +G ++ K E + Q +++ + F+ ++D G+ +++KL++ ++
Sbjct: 449 DLMVDPFGNYLIQKLFEHVSTDQRVILVKNAAPE---FMRIALDSHGTRALQKLVECIST 505
Query: 91 -QSPPLLYHVMS----ALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLY 145
+ LL +S AL R G+ V+ KCL+ N FI+ A HC
Sbjct: 506 EEESQLLIKSLSPHVVALSRDLN-------GNHVVQKCLQRLSAANNQFIFDTAAFHCNE 558
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
+A H GC L +D+ ++R Q+ ++ NA +LS GNYVVQ+VL D I+
Sbjct: 559 IATHRHGCCVLQRCLDHGTMAQRAQLSLKVAQNATNLSFDPFGNYVVQYVLTRGDAKSIE 618
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGNYVI 264
+ +R + V LSL K GS V++K L+ ++E LL N + + +D YGNYV+
Sbjct: 619 IVLSHIRNNIVTLSLHKFGSNVIEKSLRISTLTDTLIEVLLANQARFADMLNDAYGNYVL 678
Query: 265 QTAL 268
QT+L
Sbjct: 679 QTSL 682
>gi|254570018|ref|XP_002492119.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|238031916|emb|CAY69839.1| Member of the PUF protein family [Komagataella pastoris GS115]
gi|328351394|emb|CCA37793.1| Pumilio homolog 2 [Komagataella pastoris CBS 7435]
Length = 720
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 31/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L G +F ELMS +G ++ K ++ + Q ++
Sbjct: 365 QHGCRFLQKQLDIGGKNAATMIFNETYLSVIELMSDPFGNYLIQKLLDKVSVDQRITLVK 424
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP-------PLLYHVMSALKRLFKFLMMT 113
+ + F+ ++D G+ +++KL++ + L HV+S + L
Sbjct: 425 NASSK---FVRIALDPHGTRALQKLVECIDTEEESEIIIDALSSHVVSLSRDLN------ 475
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
G+ V+ KCL+ + FI+ A +HC+ +A H GC L +D+ + +
Sbjct: 476 --GNHVVQKCLQKLSSKDCQFIFDATCDHCVEIATHRHGCCVLQRCLDHGSKEQCYALSL 533
Query: 174 LISVNAASLSRHRSGNYVVQHVL-------NLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
+S N LS GNYVVQ+VL N+ D + I A++ + LSL K GS
Sbjct: 534 EVSRNCIPLSFDPFGNYVVQYVLSQNEMIKNINDSKPVANIVAAIKDSIITLSLHKFGSN 593
Query: 227 VVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
V++K LK ++++LL ++ +I ++ +D YGNYV+QTAL + ++ +RL
Sbjct: 594 VIEKCLKIPRVSKLVIDQLLETHATKISELLNDPYGNYVLQTALDVSTPEE----FERLS 649
Query: 285 TKLQQHLAALRVMKYG 300
L+ L +R +G
Sbjct: 650 ELLKPLLPTVRNTPHG 665
>gi|448112001|ref|XP_004201984.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359464973|emb|CCE88678.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 825
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 131/247 (53%), Gaps = 23/247 (9%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLI----- 86
ELM+ +G ++ K E+ + Q +++ + + F+ ++D G+ +++KL+
Sbjct: 554 ELMTDPFGNYLIQKLFENVSTDQRIILVKNSSPE---FIKIALDTHGTRALQKLVECITT 610
Query: 87 ----KVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEH 142
+++ +S L H++S + L G+ V+ KCL+ +N FI+ A +
Sbjct: 611 EEEGRIIIES--LSPHIVSLSRDLN--------GNHVVQKCLQKLKPSENQFIFDTASMY 660
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
C +A H GC L +D+ +RKQ+ ++ NA +LS GNYVVQ+VL+ D
Sbjct: 661 CNEIATHRHGCCVLQRCLDHGNAEQRKQLSLRVAENATNLSLDPFGNYVVQYVLSRGDEH 720
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGN 261
I I ++ + + LSL K GS V++K L+ +++ LL N ++ ++ +D +GN
Sbjct: 721 SIGLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGN 780
Query: 262 YVIQTAL 268
YV+QT+L
Sbjct: 781 YVLQTSL 787
>gi|448114573|ref|XP_004202611.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
gi|359383479|emb|CCE79395.1| Piso0_001455 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 131/247 (53%), Gaps = 23/247 (9%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLI----- 86
ELM+ +G ++ K E+ + Q +++ + + F+ ++D G+ +++KL+
Sbjct: 553 ELMTDPFGNYLIQKLFENVSTDQRIILVKNSSPE---FIKIALDTHGTRALQKLVECITT 609
Query: 87 ----KVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEH 142
+++ +S L H++S + L G+ V+ KCL+ +N FI+ A +
Sbjct: 610 EEEGRIIIES--LSPHIVSLSRDLN--------GNHVVQKCLQKLKPSENQFIFDTASMY 659
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
C +A H GC L +D+ +RKQ+ ++ NA +LS GNYVVQ+VL+ D
Sbjct: 660 CNEIATHRHGCCVLQRCLDHGNAEQRKQLSLEVAENATNLSLDPFGNYVVQYVLSRGDEH 719
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL-NSDQILQVASDKYGN 261
I I ++ + + LSL K GS V++K L+ +++ LL N ++ ++ +D +GN
Sbjct: 720 SISLIMDHIKNNIITLSLHKFGSNVIEKSLRIGKLTDELIKVLLENQNRFPELLNDAFGN 779
Query: 262 YVIQTAL 268
YV+QT+L
Sbjct: 780 YVLQTSL 786
>gi|384494806|gb|EIE85297.1| hypothetical protein RO3G_10007 [Rhizopus delemar RA 99-880]
Length = 416
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 17/248 (6%)
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT----KPGSSVILK 122
+L S++ G+ +V+++I++++ L + A+ + F +++T G+ VI K
Sbjct: 141 ELMTEISLNMHGTRAVQRMIELIS-----LDEQIQAIVKAFSPIVVTLIKDINGNHVIQK 195
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL FIY A E+C+ +A H GC L ID + KQ++ I +A +L
Sbjct: 196 CLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANHQTKQLVDEIISHALTL 255
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
+ GNYVVQ+VL L D D + G+ LS+ K S V++K ++ ++ H
Sbjct: 256 VQDPYGNYVVQYVLELGDAKFSDRLIRQFIGNLSKLSIQKYSSNVMEKCIRVAEEDTRHD 315
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+++E++N D++ ++ D Y NYV+QTAL S HQ+L ++ L +R Y
Sbjct: 316 LIQEMMNKDRLEKLLKDSYANYVVQTALDYASE----SQHQQLAECIRPLLPTIRNTSYC 371
Query: 301 SNKEIQKK 308
K IQ K
Sbjct: 372 --KRIQGK 377
>gi|428168220|gb|EKX37168.1| hypothetical protein GUITHDRAFT_89808 [Guillardia theta CCMP2712]
Length = 505
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 153/320 (47%), Gaps = 26/320 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ++L LD +F V +LM+ +G ++ K ++ CN Q A I+ ++
Sbjct: 51 GCRFLQKQLEENTQMSLDIIFSEVIERIVDLMTDPFGNYLCQKLLDYCNPEQRAAIVSRV 110
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA----QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ S++ G+ + +KLI+ + + + V++ LK L+ G+
Sbjct: 111 APH---LVPISLNIHGTRAAQKLIERLGSDHYPTEAEIQAVVNHLKGGVIQLIQDLNGNH 167
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ +CL+ N FIY A +HC+ +A H GC +D ++ Q++ +
Sbjct: 168 VVQRCLQKLDAKHNQFIYDAVAQHCILVASHRHGCCVFQRCVDFATPEQKHQVVMQVVEK 227
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH-------YVDLSLTKCGSFVVQKF 231
L + + GNYVVQ+VL + FL+ +C + Y + K S VV+K
Sbjct: 228 TVQLVQDQYGNYVVQYVLE-QVTFLL-LVCASSHSPPTYQVPAYRPNIVQKFSSNVVEKC 285
Query: 232 LKYQN--AVHYIVEELLNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQ 288
L+ + +V +L +QIL + D Y NYVIQ AL V T Q + L+ ++
Sbjct: 286 LQLASPEGQALMVTQLAQKEQILSLLQDPYANYVIQRALQVATSPQLEM-----LLDAIK 340
Query: 289 QHLAALRVMKYGSNKEIQKK 308
HL+A+R YG ++IQ +
Sbjct: 341 PHLSAIRNTSYG--RKIQSR 358
>gi|357445491|ref|XP_003593023.1| Pumilio homology domain family member [Medicago truncatula]
gi|355482071|gb|AES63274.1| Pumilio homology domain family member [Medicago truncatula]
Length = 454
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 143/308 (46%), Gaps = 19/308 (6%)
Query: 5 QYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-----SCNESQLALII 59
QYLQ + G+ + + V + ELM+ ++G ++ K + +C Q+ L +
Sbjct: 120 QYLQAVIDEGNPVYVTMILLEVKDYLHELMTHRFGSYLIQKIFQARRGMTC--QQMDLTV 177
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
I + +D G+ +++ +I V + P Y V+ L+ + LM GS V
Sbjct: 178 FLIISNHRKLKDVCMDHHGTRAMQTMIANV-RHPFTGYVVVYMLQHITIPLMKNVNGSYV 236
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS--- 176
I++C++ I +C+ +A + GC + +D G R I L++
Sbjct: 237 IVQCVKFFPPKHKKIILDEVARNCVDIATDKIGCSAVKKCLD--YGGRTSAIDILVAQII 294
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
NA LS GNYVVQ V+ ++ P + + LR + LS+ K S VV+ L +
Sbjct: 295 SNAMILSEDPYGNYVVQRVIQMKIPLANEQMVQELRSKFDRLSVNKYASNVVEYLLSFSN 354
Query: 235 QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
Q+AV I EE++ S L V D YGNYV Q AL R + V +R + ++ H AL
Sbjct: 355 QDAVKVIAEEIMRSRNFLNVLHDPYGNYVAQRAL----RCTKGHVRRRFSSLIKSHRLAL 410
Query: 295 RVMKYGSN 302
+ YG N
Sbjct: 411 QSHIYGKN 418
>gi|357449403|ref|XP_003594978.1| Pumilio-like protein [Medicago truncatula]
gi|355484026|gb|AES65229.1| Pumilio-like protein [Medicago truncatula]
Length = 984
Score = 98.2 bits (243), Expect = 4e-18, Method: Composition-based stats.
Identities = 89/311 (28%), Positives = 145/311 (46%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S + +F V +LM+ +G +V KF E N Q +
Sbjct: 668 QHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGNPEQRKELAE 727
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ Q L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 728 KLAGQ---ILPLSLQMYGCRVIQKALEVIEHEQKAQLVRELDGNIMRCVR----DQNGNH 780
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E +K FI A L+ H GC + +++ + Q I+ I
Sbjct: 781 VIQKCIESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQRILEHCTDEVQCQFIVDEILE 840
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ SL++ + GNYV QHVL P I L GH V LS K S VV+K L+Y +A
Sbjct: 841 SVCSLAQDQYGNYVTQHVLERGRPQERSQIISKLSGHVVQLSQHKFASNVVEKCLEYGDA 900
Query: 238 VH---YIVEELLNSDQ---ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
IVE + + +Q +L + D++ NYVIQ + R RL++ ++ H
Sbjct: 901 SEREVLIVEIIAHDEQNDNLLTMMKDQFANYVIQKVIDICSENQR----ARLLSHIRAHA 956
Query: 292 AALRVMKYGSN 302
AL+ YG +
Sbjct: 957 NALKKYTYGKH 967
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 69/163 (42%), Gaps = 9/163 (5%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ + + + +A+ L GNYV+Q +P
Sbjct: 660 HIVEFSSDQHGSRFIQQKLESCGAEEKALVFKEVLPHASKLMTDVFGNYVIQKFFEYGNP 719
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ L G + LSL G V+QK L+ +V EL I++ D+
Sbjct: 720 EQRKELAEKLAGQILPLSLQMYGCRVIQKALEVIEHEQKAQLVREL--DGNIMRCVRDQN 777
Query: 260 GNYVIQTALVETMRQDR----LSVHQRLVTKLQQHLAALRVMK 298
GN+VIQ +E++ ++ LS + V L H RV++
Sbjct: 778 GNHVIQKC-IESIPTNKIGFILSAFRGQVANLSMHPYGCRVIQ 819
>gi|367015510|ref|XP_003682254.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
gi|359749916|emb|CCE93043.1| hypothetical protein TDEL_0F02320 [Torulaspora delbrueckii]
Length = 823
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 144/291 (49%), Gaps = 12/291 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S D +F T ELM+ +G ++ K +E Q + +
Sbjct: 511 QHGCRFLQKQLDILGSEAADSIFEETKNHTVELMTDSFGNYLIQKLLERVTVEQR-ITLA 569
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI F+ + + G+ +++KL++ + S ++ +LK L G+ ++
Sbjct: 570 KIAAPH--FVYIASNPHGTRALQKLVECIG-SKEEANIIIGSLKGSVVELSKDLNGNHIV 626
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ + FI+ AA EHC +A H GC L +D+ +R+++ + N
Sbjct: 627 QKCLQKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLLSNID 686
Query: 181 SLSRHRSGNYVVQHVLNLE----DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E + + I AL+ +LSL K GS V++K L+
Sbjct: 687 HLTLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSNVIEKILRTPA 746
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
++ ELL+S I + +D YGNYV+QT +++ Q+ +H+ LV
Sbjct: 747 VSDDLITELLSSRAEADIQALLNDGYGNYVLQT-MLDVTHQNNHYLHESLV 796
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ--ILHLISVNAASLSRHRSGNYVVQHVL 196
A H +Y+A + G L ++ + GS+ + I+ + + LS+ +GN++VQ L
Sbjct: 572 AAPHFVYIASNPHGTRALQKLVECI-GSKEEANIIIGSLKGSVVELSKDLNGNHIVQKCL 630
Query: 197 NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQV 254
P + I A H +++ + G V+Q+ L + + V + ++LL++ I +
Sbjct: 631 QKLQPNDVQFIFDAASEHCTEIATHRHGCCVLQRCLDHGDEVQRQRLCDKLLSN--IDHL 688
Query: 255 ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
D +GNYV+Q + + ++V L+ + L + K+GSN
Sbjct: 689 TLDPFGNYVVQYIITKESESGNNYFTLKIVQALKSKVTELSLHKFGSN 736
>gi|357443885|ref|XP_003592220.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355481268|gb|AES62471.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 416
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 13/305 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES---CNESQLALII 59
G QYLQ K+ G+ ++ + +V +LM+ ++ K ++ Q+ I+
Sbjct: 103 GCQYLQAKIEKGNPADVEFILSIVKDHVHQLMT-HNNNYLIKKIFQARSGVTPEQMESIV 161
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
L I DQ +D G+ ++ ++K + S V+ + R+ L+ + G V
Sbjct: 162 LSIISDDQKLKHVCMDNRGTRVMQNMLKNIKLSFTTYNVVVCTMHRITLALVKSFNGGYV 221
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
IL+CL+ + I +C+ + + GC + + ++GS + ++ I NA
Sbjct: 222 ILQCLKFFQSEHKRVILDQVARNCVDITTDKIGCSIIQKCLSLVEGSVKSLLVTEIISNA 281
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNA 237
L+ GNYV+Q V+ +E + + LRG + S++K S VV+ L++ +N
Sbjct: 282 MILAEDPYGNYVLQFVITMESSATREKMIKQLRGKFARFSMSKHSSNVVEDLLRFSNEND 341
Query: 238 VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH-QRLVTK----LQQHLA 292
V IVEE++ S L V D +GNYV Q AL T + RL +L+T LQ HL
Sbjct: 342 VAVIVEEIMKSCDFLNVVQDPFGNYVAQRALKCT--KGRLHRELAKLITSNKRILQSHLY 399
Query: 293 ALRVM 297
RV+
Sbjct: 400 GKRVL 404
>gi|428162887|gb|EKX31992.1| hypothetical protein GUITHDRAFT_39628, partial [Guillardia theta
CCMP2712]
Length = 305
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 145/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE----SCNESQLA 56
+ GS+++Q KL +++ +F + + LM+ +G +V KF+E ++L
Sbjct: 2 QHGSRFIQTKLDGANAQDRQLVFEALLPSSVGLMTDLFGNYVVQKFLERDLVKNGRNRLT 61
Query: 57 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPG 116
I ++ L S+D +G V+K I+V+ P ++ L+ + + G
Sbjct: 62 CSIPQV-------LELSLDMYGCRVVQKAIEVI--EGPRQEQLVRELQGNVMKCVRDQNG 112
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ VI KC+E S FI + + + LA H GC + +++ K + IL I
Sbjct: 113 NHVIQKCIERSAPETVQFIVEDFIGQVVQLAMHPYGCRVIQRILEHCKHDQVAPILSEIV 172
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+A L + GNYVVQHVL +AI G V +S K S VV+K L Q
Sbjct: 173 RSAKELVHDQYGNYVVQHVLEHGRGQDREAILQKCEGQIVAMSQHKFASNVVEKLL--QV 230
Query: 237 AVHYIVEELL-----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ I++E+ + +L + D YGNYV+Q AL DR RL+ +++HL
Sbjct: 231 LLVTILDEVTGNQPSGAPSVLDMMRDAYGNYVVQKALDVCEGVDRA----RLIAAIREHL 286
Query: 292 AALRVMKYGSN 302
A+R YG +
Sbjct: 287 PAVRKFTYGKH 297
>gi|410080980|ref|XP_003958070.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
gi|372464657|emb|CCF58935.1| hypothetical protein KAFR_0F03390 [Kazachstania africana CBS 2517]
Length = 807
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L D +F T ELM+ +G ++ K IE Q + I
Sbjct: 494 QHGCRFLQKQLDVLGKYAADAIFEETKDHTIELMTDSFGNYLIQKLIERVTTEQ-RIEIA 552
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI + F+ +++ G+ +++KLI+ ++ + ++ ALK L M G+ V+
Sbjct: 553 KIASPE--FVDIALNSHGTRALQKLIECISTAEEANI-IIEALKPAVVRLSMDLNGNHVV 609
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCLE FI+ A+ C+ +A H GC L +D+ + + + N
Sbjct: 610 QKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQTTSLCDQLLTNLD 669
Query: 181 SLSRHRSGNYVVQHVLNLE----DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ++L E D I L+ +LSL K GS V++K LK
Sbjct: 670 KLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKFGSNVIEKLLKTNV 729
Query: 237 AVHYIVEELLNSD---QILQVASDKYGNYVIQTAL 268
I+ EL+ D I + +D YGNYV+QTAL
Sbjct: 730 VSESIIAELVKEDGKSDIESLLNDSYGNYVLQTAL 764
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVH 239
LS +GN+VVQ L +P I G +D++ + G V+Q+ L + +
Sbjct: 599 LSMDLNGNHVVQKCLEKLEPKDFQFIFDLAIGDCIDIATHRHGCCVLQRCLDHGTKEQTT 658
Query: 240 YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
+ ++LL + + ++ D +GNYV+Q L + + ++V L+ LA L + K+
Sbjct: 659 SLCDQLLTN--LDKLTLDPFGNYVVQYILTKEAEKQDYEYTYKIVNLLKPKLAELSLHKF 716
Query: 300 GSN 302
GSN
Sbjct: 717 GSN 719
>gi|242036643|ref|XP_002465716.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
gi|241919570|gb|EER92714.1| hypothetical protein SORBIDRAFT_01g044430 [Sorghum bicolor]
Length = 716
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 37/302 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ+K G + D +F + +LM +G ++ K +E C+E Q IIL
Sbjct: 432 QNGCRYLQDKFLEGKHHV-DAIFEGIINHIADLMISSFGNYLVQKMLEVCDEGQRLRIIL 490
Query: 61 KITFQDQL--FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+T QD + + S++ G+ V++LI+ V ++ ++SAL+ F L+ G+
Sbjct: 491 VLT-QDPVKQLIAISLNTHGTRVVQRLIETVRSRDQIIL-IISALQPNFMLLVNDPNGNH 548
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI KCL +F G + I N +G + ++ I
Sbjct: 549 VIQKCL-------TNF-----------------GAEDNKRCISNARGVYQANLIVEICAR 584
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
L++ GNYVVQ+VL L+ P + G Y+ LS K S VV++ LK+ +
Sbjct: 585 GFELAQDPFGNYVVQYVLELKIPSANAHLASQFEGKYIYLSKQKVSSNVVERCLKFFPDD 644
Query: 237 AVHYIVEE--LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
A IV E LL+ Q+ D Y NYVI TAL+ T + +H LV ++ H A+
Sbjct: 645 AKAVIVHELLLLSGSHFEQLLQDPYANYVIYTALLHT----KGHLHNALVEAIRPHEDAI 700
Query: 295 RV 296
R
Sbjct: 701 RT 702
>gi|357167245|ref|XP_003581070.1| PREDICTED: pumilio homolog 2-like [Brachypodium distachyon]
Length = 764
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 13/302 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL + K+
Sbjct: 431 GSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEFATESQLNQLADKL 490
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
++F L S +G V+K+I+VV + ++ LK + + G+ VI K
Sbjct: 491 N--GRIFEL-SFHMYGCRVVQKVIEVVDMDRKI--DIVQELKNYVLKCIGDQNGNHVIQK 545
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVNAAS 181
C+E + F+ +A L L H+ GC + +++ + + +++ I +A
Sbjct: 546 CIECVPEERIPFVIEAILSQIFMLCTHQYGCRVIQRVLEHCHDPATQSAVMNEIVQHACG 605
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L+ + GNYVVQHVL P +I L G + LS K S V++K L Y
Sbjct: 606 LTEDKFGNYVVQHVLQHGKPEERSSIIQKLSGQVLFLSQQKYASNVIEKCLVYGTPEERD 665
Query: 241 -IVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ E+++S Q Q + D++GNYV+Q L +T L + +++ ++ HL L+
Sbjct: 666 GLIREIVSSGQTFQALMKDQFGNYVVQKVL-QTCDDRHLEM---ILSSIKLHLNELKTYT 721
Query: 299 YG 300
YG
Sbjct: 722 YG 723
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 5/141 (3%)
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL 198
AL + + ++ + G + ++ + R++I I NA L+ GNYV+Q
Sbjct: 418 ALGNVMKVSVDQYGSRFIQQKLEEASAADREKIFPEILSNAIPLTTDVFGNYVIQKFFEF 477
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVAS 256
++ + L G +LS G VVQK ++ + IV+EL N +L+
Sbjct: 478 ATESQLNQLADKLNGRIFELSFHMYGCRVVQKVIEVVDMDRKIDIVQELKN--YVLKCIG 535
Query: 257 DKYGNYVIQTALVETMRQDRL 277
D+ GN+VIQ +E + ++R+
Sbjct: 536 DQNGNHVIQKC-IECVPEERI 555
>gi|71028510|ref|XP_763898.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350852|gb|EAN31615.1| RNA-binding protein, putative [Theileria parva]
Length = 915
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 141/308 (45%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ +L D+ + V F LM+ +G ++ K + C+ QL II
Sbjct: 300 QTGCRMLQRQLECSDTAFTSAVLREVLDNLFLLMTDPFGNYLCQKLMSVCDAGQLGDIIT 359
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q F+ ++ G+ +++KLI+VV+ + + + + L L+ G+ VI
Sbjct: 360 GCETQ---FIPICLNMHGTRAIQKLIEVVSGNN--VNRITAILSAGVVELINDLNGNHVI 414
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + +FIY+A EHC+ LA H GC + ID ++R +++ I+
Sbjct: 415 QKCLVALSSDDCEFIYRAMNEHCVGLATHRHGCCVMQRCIDAASPTQRAKLVDTIAAKTL 474
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L GNYV+Q+VL L D + I L S K S VV++ L + +
Sbjct: 475 ELVEDAYGNYVIQYVLRLRDDAVNARIVSLLCEDLTKFSKHKFSSNVVERCLIFCPSSVR 534
Query: 239 HYIVEELLN------SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V LN D IL D +GNYVIQ L + D L+ L+ +Q HL
Sbjct: 535 SNLVSRFLNLPFSVLHDLIL----DPFGNYVIQRVL-NVAQPDELA---HLLDIIQPHLE 586
Query: 293 ALRVMKYG 300
L+++ G
Sbjct: 587 ELKLVSSG 594
>gi|218192238|gb|EEC74665.1| hypothetical protein OsI_10341 [Oryza sativa Indica Group]
Length = 671
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 45/298 (15%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + D +F + ELM+ + ++ K ++ C+E Q II
Sbjct: 403 QNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEEQRLRIIA 461
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T L S++ G+ S++KLI+ V ++ ++SAL+ F L+ G+ VI
Sbjct: 462 ILTEDPVKLLRVSLNSHGTRSIQKLIETVKTRKQIML-IISALQPGFIHLVNDPNGNHVI 520
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ +N IY H K L++++
Sbjct: 521 QKCLKNFDAEENKIIYDGTDTH-------------------------YKNSLNVLT---- 551
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
NYV+Q+VL+L+ PF + +G+YV LS K GS VV+K LK +
Sbjct: 552 --------NYVIQYVLDLKIPFANAQLASLFQGNYVYLSKQKVGSNVVEKCLKVFPDDDK 603
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
I+ EL+++ Q+ D Y NYVI TAL +T R + LV + H A+R
Sbjct: 604 AAIIWELISASHFEQLLQDPYANYVIHTALAQT----RGHLRSALVNAILPHEEAIRT 657
>gi|84996421|ref|XP_952932.1| pumilio-family RNA-binding protein [Theileria annulata strain
Ankara]
gi|65303929|emb|CAI76308.1| pumilio-family RNA-binding protein, putative [Theileria annulata]
Length = 830
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 142/308 (46%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ +L D+ + V F LM+ +G ++ K + C+ QL II
Sbjct: 274 QTGCRMLQRQLECNDTVFTTAVLGEVLDNLFLLMTDPFGNYLCQKLMSVCDSEQLGQIIT 333
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q F+ ++ G+ +++KLI+VV+ + + + + L L+ G+ VI
Sbjct: 334 ACEPQ---FIPICLNMHGTRAIQKLIEVVSGTN--VGRITAILSAGVVELINDLNGNHVI 388
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + +FIY+A EHC+ LA H GC + ID +R +++ I+
Sbjct: 389 QKCLVALSSDECEFIYKAMNEHCVGLATHRHGCCVMQRCIDAASVPQRARLVDTIAAKTL 448
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L GNYV+Q+VL L D + I L S K S VV++ L + +
Sbjct: 449 ELVEDAYGNYVIQYVLRLRDDAVNARIVALLCEDLTRFSKHKFSSNVVERCLIFCPSSVR 508
Query: 239 HYIVEELLN------SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V LN D IL D +GNYVIQ L + D L+ +L+ +Q HL
Sbjct: 509 SNLVSRFLNLPFTVLHDLIL----DPFGNYVIQRVL-NVAQPDELA---QLLDIIQPHLE 560
Query: 293 ALRVMKYG 300
L+++ G
Sbjct: 561 ELKLVSSG 568
>gi|62002537|gb|AAX58753.1| PUF-domain RNA-binding protein [Physcomitrella patens]
Length = 1118
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 34/318 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E + Q
Sbjct: 793 QHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQ------ 846
Query: 61 KITFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLY----HVMSALKRLFKFLM 111
+ +QL L+ S+ +G ++K ++VV Q L+ HVM ++
Sbjct: 847 RRELANQLVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR------- 899
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQ 170
+ G+ VI KC+E K +FI A + L+ H GC + +++ ++K
Sbjct: 900 -DQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKG 958
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
I+ I + +L++ + GNYVVQHVL + I L G V +S K S VV+K
Sbjct: 959 IMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEK 1018
Query: 231 FLKYQNAV--HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L+Y V +++E+L + ++ LQ + D++ NYV+Q L ET + S + L+
Sbjct: 1019 CLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELLL 1074
Query: 285 TKLQQHLAALRVMKYGSN 302
+++ HL AL+ YG +
Sbjct: 1075 GRIRVHLHALKKYTYGKH 1092
>gi|168012861|ref|XP_001759120.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689819|gb|EDQ76189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1119
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 88/318 (27%), Positives = 153/318 (48%), Gaps = 34/318 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E + Q
Sbjct: 794 QHGSRFIQQKLETATPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQ------ 847
Query: 61 KITFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLY----HVMSALKRLFKFLM 111
+ +QL L+ S+ +G ++K ++VV Q L+ HVM ++
Sbjct: 848 RRELANQLVGHVLVLSLQMYGCRVIQKALEVVDVDQQTVLVSELDGHVMRCVR------- 900
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQ 170
+ G+ VI KC+E K +FI A + L+ H GC + +++ ++K
Sbjct: 901 -DQNGNHVIQKCIECVPPAKINFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKG 959
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
I+ I + +L++ + GNYVVQHVL + I L G V +S K S VV+K
Sbjct: 960 IMEEILRSTCTLAQDQYGNYVVQHVLEHGRDYERTEIITKLAGQIVQMSQHKFASNVVEK 1019
Query: 231 FLKYQNAV--HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L+Y V +++E+L + ++ LQ + D++ NYV+Q L ET + S + L+
Sbjct: 1020 CLEYGGPVERQILIDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELLL 1075
Query: 285 TKLQQHLAALRVMKYGSN 302
+++ HL AL+ YG +
Sbjct: 1076 GRIRVHLHALKKYTYGKH 1093
>gi|169791859|pdb|3BWT|A Chain A, Crystal Structure Of The Rna Binding Domain Of Puf4 From
Saccharomyces Cerevisiae
Length = 333
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 11/282 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 22 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 80
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 81 KISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 137
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 138 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 197
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K LK
Sbjct: 198 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAI 257
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 258 VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 113
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 170 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSN 247
>gi|207345268|gb|EDZ72145.1| YGL014Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 349
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 11/282 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 36 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 94
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 95 KISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 151
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 152 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 211
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K LK
Sbjct: 212 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAI 271
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 272 VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 313
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 68 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 127
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 128 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 183
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 184 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 238
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 239 THKIVHLLKPRAIELSIHKFGSN 261
>gi|297806995|ref|XP_002871381.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
gi|297317218|gb|EFH47640.1| hypothetical protein ARALYDRAFT_908911 [Arabidopsis lyrata subsp.
lyrata]
Length = 383
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 132/273 (48%), Gaps = 29/273 (10%)
Query: 39 GRFV-FGKFIESCN-------ESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
GRF F KF++ + ES L I +T + FL + +++GS S+ L +
Sbjct: 107 GRFAEFQKFLQDLDTNPTAERESHLFKIGSLLTTNKRTFLHLATNQYGSQSLHILFR--- 163
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
+SP L + + A+ F LM K +I+ + K + +Y+ E+ L LA
Sbjct: 164 RSPSLDHLLFHAVGINFFLLMTDKYARGLIISAIRAVDKTKKEVLYKLTYEYTLQLA--- 220
Query: 151 QGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
+G R I ++ NA L+ G +VVQ+ L L++P AI
Sbjct: 221 -------------RGKYRDLIFECVAKNAEWLAFDPYGTHVVQNFLTLQNPVATTAIAER 267
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSD-QILQVASDKYGNYVIQTALV 269
LRG++ L++ + GS+VV+K LK A ++EE +D + +++ +DK+GN+V+Q AL
Sbjct: 268 LRGNFFSLAMERQGSYVVEKCLKSDFARGKVLEEFRGNDKEWVRMTTDKFGNFVVQCALR 327
Query: 270 ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++ + + V KL+ H + + +G N
Sbjct: 328 VMKEKEMRPMLREFVEKLRPHFWRMEI-GHGRN 359
>gi|169791860|pdb|3BX2|A Chain A, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
gi|169791861|pdb|3BX2|B Chain B, Puf4 Rna Binding Domain Bound To Ho Endonuclease Rna 3'
Utr Recognition Sequence
Length = 335
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 11/282 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 22 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 80
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 81 KISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 137
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 138 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 197
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K LK
Sbjct: 198 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAI 257
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 258 VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 113
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 170 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSN 247
>gi|403215598|emb|CCK70097.1| hypothetical protein KNAG_0D03510 [Kazachstania naganishii CBS
8797]
Length = 829
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN---ESQLAL 57
+ G ++LQ++L D +F T ELM+ +G ++ K IE ++L++
Sbjct: 516 QHGCRFLQKQLDIMGKEAADVIFEETKEHTVELMTDSFGNYLVQKLIERVTIEQRTELSM 575
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
I F+ + + G+ +++KLI+ V+ SP ++S LK L G+
Sbjct: 576 IA------SPHFVSIAKNPHGTRALQKLIECVS-SPEEAQIIISTLKDCVVVLSKDLNGN 628
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI KCLE FI+ A + C +A H GC L +D ++ + + +++
Sbjct: 629 HVIQKCLERLQPPDFQFIFDATCKECSSIATHRHGCCVLQRCLDFGTKAQFQSLCNVLLS 688
Query: 178 NAASLSRHRSGNYVVQHVLNLE----DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
N L+ GNYVVQ+++ E D I +L+ +LS+ K GS V++K L+
Sbjct: 689 NIDKLTLDPFGNYVVQYIVTKETERKDYDYTFKIANSLKAKMGELSVHKFGSNVIEKLLR 748
Query: 234 YQNAVHYIVEELLNSD---QILQVASDKYGNYVIQTALVETMRQDR 276
+++ELLN D +I + +D YGNYV+QT L + ++++
Sbjct: 749 TPVVCEALIQELLNDDSGKEIELLLNDSYGNYVLQTTLDVSHKRNK 794
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 15/172 (8%)
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLN 197
A H + +A + G L I+ + QI+ + LS+ +GN+V+Q L
Sbjct: 577 ASPHFVSIAKNPHGTRALQKLIECVSSPEEAQIIISTLKDCVVVLSKDLNGNHVIQKCLE 636
Query: 198 -LEDP---FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNS--DQI 251
L+ P F+ DA C ++ + G V+Q+ L + + + L N I
Sbjct: 637 RLQPPDFQFIFDATCKECS----SIATHRHGCCVLQRCLDFGTKAQF--QSLCNVLLSNI 690
Query: 252 LQVASDKYGNYVIQTALV-ETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++ D +GNYV+Q + ET R+D ++ L+ + L V K+GSN
Sbjct: 691 DKLTLDPFGNYVVQYIVTKETERKD-YDYTFKIANSLKAKMGELSVHKFGSN 741
>gi|385252070|pdb|4DZS|A Chain A, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
gi|385252071|pdb|4DZS|B Chain B, Crystal Structure Of Yeast Puf4p Rna Binding Domain In
Complex With Ho-4be Mutant Rna
Length = 357
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 136/282 (48%), Gaps = 11/282 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 44 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 102
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 103 KISSPH--FVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 159
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 160 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 219
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K LK
Sbjct: 220 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAI 279
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 280 VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 321
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 76 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 135
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 136 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 191
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 192 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 246
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 247 THKIVHLLKPRAIELSIHKFGSN 269
>gi|15237851|ref|NP_200736.1| pumilio 16 [Arabidopsis thaliana]
gi|313471419|sp|Q9FIE9.2|PUM16_ARATH RecName: Full=Putative pumilio homolog 16; Short=APUM-16;
Short=AtPUM16
gi|332009782|gb|AED97165.1| pumilio 16 [Arabidopsis thaliana]
Length = 332
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 7/204 (3%)
Query: 69 FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSY 128
F++ + +K GS +++KL+ S + A+ RLF +M K S V ++ +
Sbjct: 87 FMVITTNKNGSKTLQKLM---GMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQ 143
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRS 187
K + +Y L + +LA + GCI LN I ++ R Q+L +++ NA LS
Sbjct: 144 QDKRELMYDQILRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAY 203
Query: 188 GNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-AVHYIVEELL 246
GN+VVQHVL L D I L G+ V+LS K GS++V++ L+ + + +V +LL
Sbjct: 204 GNFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLL 263
Query: 247 --NSDQILQVASDKYGNYVIQTAL 268
++ ++++A +YGN+V+ AL
Sbjct: 264 ACKTEMLIRLARSEYGNFVVCKAL 287
>gi|224113073|ref|XP_002316382.1| predicted protein [Populus trichocarpa]
gi|222865422|gb|EEF02553.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 152/308 (49%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + LM+ +G +V KF++ ESQ ++ ++
Sbjct: 684 GSRFIQQKLETASVEEKNKIFPEIIPHARTLMTDVFGNYVIQKFLDHGTESQRLELVSRL 743
Query: 63 TFQDQLFLLASVDKFGSSSVKK---LIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
T L S+ +G ++K +I V Q+ ++ S +K + + G+ V
Sbjct: 744 TGN---VLPLSLQMYGCRVIQKALEMIDVDRQTQIVVELDGSVIK-----CIRDQNGNHV 795
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVN 178
I KC+E + FI A L L+ H GC + +++ K +QI + I +
Sbjct: 796 IQKCIECVPEDRIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCKDMNTQQIIMDEIMQS 855
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L++ + GNYV+QHVL P AI L GH V +S K S VV+K L +
Sbjct: 856 VYTLAQDQYGNYVIQHVLEHGKPQERSAIISKLAGHIVLMSQQKFASNVVEKCLTFGGPE 915
Query: 239 --HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L S ++ LQ + D +GNYV+Q L ET L + ++++++ HL+
Sbjct: 916 ERQLLVNEILGSTVENEPLQAMMKDPFGNYVVQKVL-ETCNDRSLEL---IISRIRVHLS 971
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 972 ALKRYTYG 979
>gi|168030468|ref|XP_001767745.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681065|gb|EDQ67496.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1148
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 86/311 (27%), Positives = 149/311 (47%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 813 QHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRRELAS 872
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ Q L+ S+ +G ++K ++V V Q L+ + + R + + G+
Sbjct: 873 KLEGQ---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVR----DQNGNH 925
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISV 177
VI KC+E K FI A + L+ H GC + +++ ++K I+ I
Sbjct: 926 VIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILR 985
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ +L++ + GNYVVQHVL I L G V +S K S VV+K L+Y
Sbjct: 986 STCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLEYGGP 1045
Query: 238 V--HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
V +++E+L + ++ LQ + D++ NYV+Q L ET + S + L+ +++ HL
Sbjct: 1046 VERQILIDEMLGLTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELLLGRIRVHL 1101
Query: 292 AALRVMKYGSN 302
AL+ YG +
Sbjct: 1102 HALKKYTYGKH 1112
>gi|19115035|ref|NP_594123.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|2842704|sp|Q92359.1|YDHE_SCHPO RecName: Full=Pumilio domain-containing protein C6G9.14
gi|1644326|emb|CAB03616.1| RNA-binding protein (predicted) [Schizosaccharomyces pombe]
Length = 681
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 14/304 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ L + +D +F + LM +G ++ K E +E+Q + I
Sbjct: 355 QHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASEAQRSTFIQ 414
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I + + S + G+ +++K+I +V+ SP + +++AL+ L G+ VI
Sbjct: 415 IIAPK---LVPISFNMHGTRALQKIIDLVS-SPDQISCIVNALRPNVVLLTKDLNGNHVI 470
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL FI+ A E L ++ H GC + D+ ++ +Q++ I +A
Sbjct: 471 QKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVVQRCFDHASPAQIEQLVEHIVPHAL 530
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
+L + GNYV+Q+VL L +P +AI LS K S V++K + + A
Sbjct: 531 TLVQDAFGNYVLQYVLELNNPNHTEAIISYFLYKVRALSTQKFSSNVMEKCIFFAPAAIK 590
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLAALRV 296
++ EL++ + ++ D + NYVIQTAL D SV QR LV +++ + +++
Sbjct: 591 EKLISELMDEKHLPKLLRDSFANYVIQTAL------DNASVKQRAELVERIKPLIPSIKN 644
Query: 297 MKYG 300
G
Sbjct: 645 TPCG 648
>gi|68073265|ref|XP_678547.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56499050|emb|CAH95801.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 851
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 150/310 (48%), Gaps = 36/310 (11%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQ+ L + +D+++ ELM +G ++ K IE C Q+ II K + D
Sbjct: 476 LQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTPEQIEKIIDKSS--D 533
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
+L + AS+ G+ +V+KLI+++ ++P + + ++LK L+ G+ V+ KCL
Sbjct: 534 EL-INASISVHGTRTVQKLIEMI-KTPSQIRKITNSLKNSIIILIKDINGNHVVQKCLGT 591
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + +FIY L++ + ++ H GC + ID+ ++++ +++ IS N+ L +
Sbjct: 592 LSSIQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLINKISSNSLELVQDA 651
Query: 187 SGNYVVQHVLNLEDP----FLIDAICFALRGHYVD------------LSLTKCGSFVVQK 230
GNYVVQ++LN+ + +I+ + + H V + TKC ++
Sbjct: 652 FGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCLIIGTTKCRKIMING 711
Query: 231 FLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
LK V + V DKYGNYVIQ AL + L+ +LV ++ +
Sbjct: 712 LLKKGKNV------------LKNVILDKYGNYVIQRAL-SVAPEPELT---KLVEGIKPY 755
Query: 291 LAALRVMKYG 300
+ LR + G
Sbjct: 756 IKELRNINSG 765
>gi|401625713|gb|EJS43708.1| puf4p [Saccharomyces arboricola H-6]
Length = 898
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 143/288 (49%), Gaps = 23/288 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 585 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 643
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 644 KIS--SPHFVEISLNPHGTRALQKLIECITTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 700
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK------QILHL 174
KCL+ FI+ A ++C+ +A H GC L +D+ GSR + ++L L
Sbjct: 701 QKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDH--GSREQCETLCDKLLTL 758
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQK 230
+ L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K
Sbjct: 759 VD----KLTLDPFGNYVVQYIITKESAKNKYDYTHKIVHLLKPKVIELSIHKFGSNVIEK 814
Query: 231 FLKYQNAVHYIVEELLNSD---QILQVASDKYGNYVIQTALVETMRQD 275
LK ++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 815 ILKTPIVSEPMILEILNNGGEAGIQSLLNDSYGNYVLQTALDISHKQN 862
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +
Sbjct: 617 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECITTDEEA 676
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAIC + +D++ + G
Sbjct: 677 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIC----DNCIDIATHRHG 732
Query: 225 SFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR 282
V+Q+ L + + + ++LL + ++ D +GNYV+Q + + +++ +
Sbjct: 733 CCVLQRCLDHGSREQCETLCDKLLT--LVDKLTLDPFGNYVVQYIITKESAKNKYDYTHK 790
Query: 283 LVTKLQQHLAALRVMKYGSN 302
+V L+ + L + K+GSN
Sbjct: 791 IVHLLKPKVIELSIHKFGSN 810
>gi|448516169|ref|XP_003867508.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis Co 90-125]
gi|380351847|emb|CCG22071.1| hypothetical protein CORT_0B03630 [Candida orthopsilosis]
Length = 822
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 19/270 (7%)
Query: 15 DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASV 74
D + +F + LM +G ++ K +E + Q +I K Q F ++
Sbjct: 520 DESLATMVFNELDDDIVNLMLDSFGNYLIQKLVECITDEQRLELIKKSRSQ---FNRIAL 576
Query: 75 DKFGSSSVKKLIKVVAQS------------PPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
D G+ +++KLI+ V ++ ++ +L L G+ V+ K
Sbjct: 577 DSHGTRALQKLIECVGKTKDEADVKGDELQDESARLIIESLAPTIVSLSKDLNGNHVVQK 636
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL N N IY ++C +ACH GC L +D + + H I+
Sbjct: 637 CLISLSNETNQVIYDTIKDNCEVVACHRHGCCVLQRCLDYGNNQQIDALSHEITTKLDIF 696
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY-- 240
+ GNYVVQ+VL D ID I L+ ++ LS+ K GS V++K L+ N
Sbjct: 697 TADPYGNYVVQYVLTHGDRQSIDTIFAYLQSNFYQLSIHKFGSNVLEKSLRLNNTKQSSI 756
Query: 241 IVEEL--LNSDQILQVASDKYGNYVIQTAL 268
+++EL L+SDQ L+V +D YGNYV+QT L
Sbjct: 757 LIDELLKLSSDQFLKVLNDSYGNYVLQTCL 786
>gi|313471420|sp|Q9C8B8.2|PUM17_ARATH RecName: Full=Putative pumilio homolog 17; Short=APUM-17;
Short=AtPUM17
Length = 332
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 131/254 (51%), Gaps = 22/254 (8%)
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
+T F++ + +K GS S++KL+++ S + A+ RLF +M+ K S V +
Sbjct: 80 LTSDSDYFMVITRNKNGSKSLQKLMRM---SDDMDVFFFVAIMRLFIHVMIDKYASYVAI 136
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAA 180
+ + K + +Y L + L+LA + GCI LN I + R +++ ++S NA
Sbjct: 137 QGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNAL 196
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-AVH 239
LS GN+VVQHVL L D I L G+ V+LS K GS++V++ L+ ++ +
Sbjct: 197 LLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMA 256
Query: 240 YIVEELL--NSDQILQVASDKYGNYV----------IQTA-----LVETMRQDRLSVHQR 282
IV +LL ++ ++++A + GN+V I TA LV +R R +H+
Sbjct: 257 TIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRF 316
Query: 283 LVTKLQQHLAALRV 296
+K+ L ++RV
Sbjct: 317 PESKIVAILGSMRV 330
>gi|223947513|gb|ACN27840.1| unknown [Zea mays]
gi|413950240|gb|AFW82889.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 873
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 551 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 610
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K I+VV L +++ L+ + + G+ VI K
Sbjct: 611 IGR---VLALSLQMYGCRVIQKAIEVVDLE--LQTKMVAELEGHVMRCVRDQNGNHVIQK 665
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAAS 181
C+E H +FI + L+ H GC + +++ + +QI+ I +
Sbjct: 666 CIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCL 725
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L++ + GNYVVQHVL P AI L G V +S K S V++K L + N V
Sbjct: 726 LAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQ 785
Query: 240 YIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+L S + L+V D++GNYV+Q L Q R + ++T+++ HL L+
Sbjct: 786 VLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR----EMILTRIKTHLNTLK 841
Query: 296 VMKYG 300
YG
Sbjct: 842 KYTYG 846
>gi|57834079|emb|CAE02858.2| OSJNBa0014F04.24 [Oryza sativa Japonica Group]
Length = 623
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 145/305 (47%), Gaps = 19/305 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL+ +
Sbjct: 290 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA--- 346
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL FL S +G V+K+I VV + ++ LK + + G+ V
Sbjct: 347 ---DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISDQNGNHV 401
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
I KC+E F+ + L+ L H+ GC + +++ + + ++ I
Sbjct: 402 IQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVER 461
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A L+ + GNYVVQHVL P +I L G V+LS K S VV+K L + +
Sbjct: 462 AFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPD 521
Query: 237 AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q L +T L V +++ ++ HL L+
Sbjct: 522 EREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSSIKMHLNELK 577
Query: 296 VMKYG 300
+G
Sbjct: 578 NYTFG 582
>gi|365760688|gb|EHN02392.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 891
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 145/292 (49%), Gaps = 31/292 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E+ Q +++
Sbjct: 578 QHGCRFLQKQLDVLGSKAADAIFEETKEYTVELMTDSFGNYLIQKLLEAVTTEQ-RIVLT 636
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH----VMSALKRLFKFLMMTKPG 116
KI+ F+ S++ G+ +++KLI+ + Y V+ +L+ L G
Sbjct: 637 KIS--SPHFVEISLNPHGTRALQKLIECIK-----TYEEAQIVVDSLRPYTVQLSKDLNG 689
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK------Q 170
+ VI KCL+ FI+ A ++C+ +A H GC L +D+ G+R + +
Sbjct: 690 NHVIQKCLQRLKPENFQFIFDAICDNCIDIATHRHGCCVLQRCLDH--GTREQCETLCNK 747
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPF----LIDAICFALRGHYVDLSLTKCGSF 226
+L L+ L+ GNYVVQ+++ E I L+ ++LS+ K GS
Sbjct: 748 LLTLVD----KLTLDPFGNYVVQYIITKESERKKYDYTHKIVHLLKPRAIELSIHKFGSN 803
Query: 227 VVQKFLKYQNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
V++K LK ++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 804 VIEKILKTPIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 855
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 610 LMTDSFGNYLIQKLLEAVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTYEEA 669
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAIC + +D++ + G
Sbjct: 670 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAIC----DNCIDIATHRHG 725
Query: 225 SFVVQKFLKYQNAVHYIVEELLNSDQIL--QVASDKYGNYVIQTALVETMRQDRLSVHQR 282
V+Q+ L + E L N L ++ D +GNYV+Q + + + + +
Sbjct: 726 CCVLQRCLDH--GTREQCETLCNKLLTLVDKLTLDPFGNYVVQYIITKESERKKYDYTHK 783
Query: 283 LVTKLQQHLAALRVMKYGSN 302
+V L+ L + K+GSN
Sbjct: 784 IVHLLKPRAIELSIHKFGSN 803
>gi|169791866|pdb|3BX3|A Chain A, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
gi|169791867|pdb|3BX3|B Chain B, Puf4 T650cC724R MUTANT BOUND TO COX17 RNA 3' UTR
Recognition Sequence
Length = 335
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 11/282 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 22 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 80
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G +++KLI+ + V+ +L+ L G+ VI
Sbjct: 81 KISSPH--FVEISLNPHGCRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 137
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 138 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCRVLQRCLDHGTTEQCDNLCDKLLALVD 197
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K LK
Sbjct: 198 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAI 257
Query: 237 AVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 258 VSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 299
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + GC L I+ +K
Sbjct: 54 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGCRALQKLIECIKTDEEA 113
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 114 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 169
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 170 CRVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 224
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 225 THKIVHLLKPRAIELSIHKFGSN 247
>gi|226505762|ref|NP_001146200.1| uncharacterized protein LOC100279770 [Zea mays]
gi|219886161|gb|ACL53455.1| unknown [Zea mays]
Length = 873
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 551 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 610
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K I+VV L +++ L+ + + G+ VI K
Sbjct: 611 IGR---VLALSLQMYGCRVIQKAIEVVDLE--LQTKMVAELEGHVMRCVRDQNGNHVIQK 665
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAAS 181
C+E H +FI + L+ H GC + +++ + +QI+ I +
Sbjct: 666 CIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCL 725
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L++ + GNYVVQHVL P AI L G V +S K S V++K L + N V
Sbjct: 726 LAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQ 785
Query: 240 YIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+L S + L+V D++GNYV+Q L Q R + ++T+++ HL L+
Sbjct: 786 VLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR----EMILTRIKTHLNTLK 841
Query: 296 VMKYG 300
YG
Sbjct: 842 KYTYG 846
>gi|413950241|gb|AFW82890.1| hypothetical protein ZEAMMB73_959107 [Zea mays]
Length = 869
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 148/305 (48%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 547 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 606
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K I+VV L +++ L+ + + G+ VI K
Sbjct: 607 IGR---VLALSLQMYGCRVIQKAIEVVDLE--LQTKMVAELEGHVMRCVRDQNGNHVIQK 661
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAAS 181
C+E H +FI + L+ H GC + +++ + +QI+ I +
Sbjct: 662 CIECIPQHAIEFIISTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCL 721
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L++ + GNYVVQHVL P AI L G V +S K S V++K L + N V
Sbjct: 722 LAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLVFGNPVERQ 781
Query: 240 YIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+L S + L+V D++GNYV+Q L Q R + ++T+++ HL L+
Sbjct: 782 VLIGEMLGSTSESEPLEVMMKDQFGNYVVQKVLETCDDQQR----EMILTRIKTHLNTLK 837
Query: 296 VMKYG 300
YG
Sbjct: 838 KYTYG 842
>gi|366987657|ref|XP_003673595.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
gi|342299458|emb|CCC67213.1| hypothetical protein NCAS_0A06550 [Naumovozyma castellii CBS 4309]
Length = 828
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 154/312 (49%), Gaps = 22/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F T ELM+ +G ++ K IE Q + +
Sbjct: 517 QHGCRFLQKQLDVLGSKAADLIFEETKFHTIELMTDSFGNYLMQKLIERVTTEQ-RIELA 575
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV---AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
KI F+ +++ G+ +++KLI+ + ++ ++ + ++ +L K L G+
Sbjct: 576 KIA--SPQFVEIALNPHGTRALQKLIECINTEEEAKIIVESLRDSIVQLSKDLN----GN 629
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KCL+ + FI+ A ++C+ +A H GC L +D+ + +++ +
Sbjct: 630 HVVQKCLQKLHPTDFQFIFDATCDNCVDIATHRHGCCVLQRCLDHGTKEQCEKLCDKLLS 689
Query: 178 NAASLSRHRSGNYVVQHVLNLE---DPF-LIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ L+ GNYVVQ+V+ E D F I L+ +LS+ K GS V++K L+
Sbjct: 690 HVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELSVHKFGSNVIEKILR 749
Query: 234 YQNAVHYIVEELLNSD-QILQVASDKYGNYVIQTALVETMRQ-----DRLS--VHQRLVT 285
++ ELLN + +I + +D YGNYV+QTAL + DRLS V LV
Sbjct: 750 TPVVTETMILELLNHESEIQNLLNDSYGNYVLQTALDISHEHNKYLYDRLSAIVTPLLVG 809
Query: 286 KLQQHLAALRVM 297
++ R+M
Sbjct: 810 PIRNTPHGKRIM 821
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 12/127 (9%)
Query: 182 LSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
LS+ +GN+VVQ L P F+ DA C + VD++ + G V+Q+ L + +
Sbjct: 622 LSKDLNGNHVVQKCLQKLHPTDFQFIFDATC----DNCVDIATHRHGCCVLQRCLDHGTK 677
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ ++LL+ + ++ D +GNYV+Q + + +D ++V L+ +A L
Sbjct: 678 EQCEKLCDKLLS--HVDKLTLDPFGNYVVQYVITKETERDEFDYTHKIVHLLKPKVAELS 735
Query: 296 VMKYGSN 302
V K+GSN
Sbjct: 736 VHKFGSN 742
>gi|222628370|gb|EEE60502.1| hypothetical protein OsJ_13800 [Oryza sativa Japonica Group]
Length = 750
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 19/305 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL+
Sbjct: 417 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLS------ 470
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL FL S +G V+K+I VV + ++ LK + + G+ V
Sbjct: 471 QLADQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISDQNGNHV 528
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
I KC+E F+ + L+ L H+ GC + +++ + + ++ I
Sbjct: 529 IQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVER 588
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A L+ + GNYVVQHVL P +I L G V+LS K S VV+K L + +
Sbjct: 589 AFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPD 648
Query: 237 AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q L +T L V +++ ++ HL L+
Sbjct: 649 EREGLIREIVSSGQTFQGLMKDQFGNYVVQRIL-QTCDDKFLVV---ILSSIKMHLNELK 704
Query: 296 VMKYG 300
+G
Sbjct: 705 NYTFG 709
>gi|330801647|ref|XP_003288836.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
gi|325081082|gb|EGC34611.1| hypothetical protein DICPUDRAFT_98148 [Dictyostelium purpureum]
Length = 738
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 142/274 (51%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKLSS-GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G ++LQ+KL DS + +F V ELM YG+++ + ++ C+ +Q I+
Sbjct: 438 QAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIV 497
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
KI + F + +G ++KL++ + SP + ++S++K L G+ +
Sbjct: 498 DKIAPNVETF---ACHVYGIHGIQKLLQYL--SPDQVDSIISSIKNKVIQLSKDSKGNYL 552
Query: 120 I---LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ LK P N F+ A + + + H+ GC +N IDN + +Q++ I+
Sbjct: 553 VQSFLKQFSPEVNQ---FVCDAIMNNIQEICTHKVGCTVVNRCIDNANPQQLEQLVDRIT 609
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
++ L + + GNYVVQH+L+ + + +L G+ +LS+ K S V++K L+ +
Sbjct: 610 QHSLKLVQDQFGNYVVQHLLSKNKSYS-SKLIKSLLGNIAELSVQKFSSNVIEKCLQVAD 668
Query: 237 AVHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
Y I++E+ +D IL + DKY N+VIQTAL
Sbjct: 669 TETYESIIKEITEAD-ILNLLQDKYANFVIQTAL 701
>gi|399219033|emb|CCF75920.1| unnamed protein product [Babesia microti strain RI]
Length = 546
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 16/275 (5%)
Query: 32 ELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
+LM+ +G ++ K + C+E QL+L+I + + S++ G+ +V+KLI++V
Sbjct: 242 DLMTDPFGNYLCQKLMVVCSEKQLSLLINALWNN---LVQISLNMHGTRAVQKLIEIVKT 298
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLE--PSYNHKNDFIYQAALEHCLYLACH 149
Y +++ L+ L+ G+ VI KCL PS + + FIY A +C+ LA H
Sbjct: 299 RENTQY-LITILEGGVLDLIKDLNGNHVIQKCLLCLPSTDCQ--FIYDAMENNCVELATH 355
Query: 150 EQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF 209
GC + ID+ +R ++ I N L GNYVVQ+V+ L+D + I
Sbjct: 356 RHGCCVMQRCIDSANLEQRASLVENIVDNTLVLVEDAFGNYVVQYVMKLKDETINCKILE 415
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLN--SDQILQVASDKYGNYVIQ 265
L + +L+ K S VV++ L Y IVE LLN + + D YGNYVIQ
Sbjct: 416 LLLPNLYELAKQKFSSNVVERLLIYGPDEVRKSIVETLLNEPPEAFKMLILDPYGNYVIQ 475
Query: 266 TALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
L T ++ S+ + ++ +L LRV+ G
Sbjct: 476 RMLSFTRGEELNSI----LNMIKPYLNELRVLSTG 506
>gi|156844826|ref|XP_001645474.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
gi|156116137|gb|EDO17616.1| hypothetical protein Kpol_1061p41 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 145/294 (49%), Gaps = 20/294 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ G ++LQ++L + +F T ELM+ +G ++ K +E E +L +
Sbjct: 427 QHGCRFLQKQLDVMGENAANAIFNETKEHTVELMTDSFGNYLIQKLLERVTVEQRLEIAQ 486
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + F+ +++ G+ +++KL++ V V+ +L+ L G+ V
Sbjct: 487 ISAPY----FVDIALNPHGTRALQKLVECVGTEEEAQL-VVDSLQPSIVELSKDLNGNHV 541
Query: 120 ILKCL---EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ KCL +P+Y FI+ AA + C+ +A GC L +D+ +R+ + ++
Sbjct: 542 VQKCLQKLDPTYFQ---FIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQRRGLCEMLL 598
Query: 177 VNAASLSRHRSGNYVVQHVLNLE-DPFLID---AICFALRGHYVDLSLTKCGSFVVQKFL 232
N LS GNYVVQ+V+ E + D I L+ DLSL K GS VV+K L
Sbjct: 599 SNIDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHKFGSNVVEKIL 658
Query: 233 KYQNAVHYIVEELL-NSD--QILQVASDKYGNYVIQTALVETMRQDRLSVHQRL 283
K ++ ELL N+D +I + +D YGNYV+QTAL + S+++RL
Sbjct: 659 KTPALSEPLILELLKNNDESEIQMLLNDSYGNYVLQTAL-DVSHSTNPSLYKRL 711
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 4/123 (3%)
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
LS+ +GN+VVQ L DP I A VD++ + G V+Q+ L + N
Sbjct: 532 LSKDLNGNHVVQKCLQKLDPTYFQFIFDAASQDCVDIATQRHGCCVLQRCLDHGNKDQRR 591
Query: 241 -IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
+ E LL++ I Q++ D +GNYV+Q + + + ++V L+ + L + K+
Sbjct: 592 GLCEMLLSN--IDQLSIDPFGNYVVQYVITKESEEKAFDYSYKIVEVLKPKVKDLSLHKF 649
Query: 300 GSN 302
GSN
Sbjct: 650 GSN 652
>gi|281202123|gb|EFA76328.1| hypothetical protein PPL_10093 [Polysphondylium pallidum PN500]
Length = 833
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 139/269 (51%), Gaps = 10/269 (3%)
Query: 3 GSQYLQEKLSS-GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
G ++LQ+KL D+ + +F V ELM YG+++ + ++ C+ +Q +I+ +
Sbjct: 341 GCRFLQKKLEEKPDAEHVTLIFKEVYEHLIELMVDPYGQYLIPQLMKYCDNNQRKMIVDR 400
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
I + + F + +G ++K+++ + SP + +++++ L G+ +I
Sbjct: 401 IAPKVETF---ACHIYGIHGIQKVLQFL--SPEQVDTIIASISDKVISLSKDAKGNYLIQ 455
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS 181
L+ N FI A +++ + + H+ GC +N ID + ++++ I+ +A
Sbjct: 456 SFLKTFSPETNQFICDAIMKNVIEICTHKVGCTVVNRAIDCANKVQLEKLIDSITNHALQ 515
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L + + GNYVVQH+L + I + G+ +LS+ K S V++K L+ N Y
Sbjct: 516 LVQDQFGNYVVQHLLTNNKAYATKLIKSVI-GNIAELSVQKFSSNVIEKCLQVANTETYE 574
Query: 241 -IVEELLNSDQILQVASDKYGNYVIQTAL 268
IV+EL D IL + DKY N+VIQTAL
Sbjct: 575 SIVKELTEVD-ILTLLQDKYANFVIQTAL 602
>gi|52353575|gb|AAU44141.1| putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa
Japonica Group]
Length = 874
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 383 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELA--- 439
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 440 ---DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR----DQNGN 492
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ +QI+ I
Sbjct: 493 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 552
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 553 QSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 612
Query: 237 AV--HYIVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 613 PVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 668
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 669 LNTLKKYTYG 678
>gi|125562207|gb|EAZ07655.1| hypothetical protein OsI_29908 [Oryza sativa Indica Group]
Length = 1806
Score = 90.5 bits (223), Expect = 8e-16, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 141/313 (45%), Gaps = 20/313 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 1482 QHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAT 1541
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 1542 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVR----DQNGNH 1594
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 1595 VIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILE 1654
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 1655 SACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDM 1714
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV++ +D +L + D+Y NYV+Q L Q R + L+++++ HL
Sbjct: 1715 TERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKGHL 1770
Query: 292 AALRVMKYGSNKE 304
ALR YG + E
Sbjct: 1771 QALRKYTYGKHIE 1783
Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 1474 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 1533
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ L GH + LSL G V+QK L+ I V EL I++ D+
Sbjct: 1534 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 1591
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ +E + + + +V+ + +A+L + YG
Sbjct: 1592 GNHVIQKC-IECVPTEHIGF---VVSAFRGQVASLSMHPYG 1628
>gi|14719326|gb|AAK73144.1|AC079022_17 putative pumilio/Mpt5 family RNA-binding protein [Oryza sativa]
Length = 851
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 528 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELA--- 584
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 585 ---DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR----DQNGN 637
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ +QI+ I
Sbjct: 638 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 697
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 698 QSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 757
Query: 237 AV--HYIVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 758 PVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 813
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 814 LNTLKKYTYG 823
>gi|300120006|emb|CBK19560.2| unnamed protein product [Blastocystis hominis]
Length = 328
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 5 QYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITF 64
++LQ L + ++D L+ + LM+ Q+G ++F K +E ++ Q +++ +
Sbjct: 12 RHLQLALDQEGTSLVDVLYEEMGERIGLLMTNQFGNYLFQKILEMSSDQQRRQLLVMVQS 71
Query: 65 QDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCL 124
Q AS D G+ V+KLI + + P ++ ++ L L G+ VI CL
Sbjct: 72 Q---LREASKDVHGTRCVQKLIHL-CRLPDMVNRILDGLCPFVVELCADVNGNHVIKCCL 127
Query: 125 EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSR 184
+ + ++HC+ ++ GC + I+ G ++ I +A L R
Sbjct: 128 KSMAAELRQRLLDEVVDHCIEISKEMYGCSIIQKCIEIASGESADRLFDTIEAHALDLMR 187
Query: 185 HRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIV 242
R NYV+Q+++ P C + H +LS KC S VV+K L + I+
Sbjct: 188 DRYANYVIQYLIENARPSESLRFCRCVLTHVEELSKEKCSSNVVEKSLNRGDEATRDSII 247
Query: 243 EELLNSDQILQVASDKYGNYVIQTALV 269
E++N+ + + D Y NYVIQ ALV
Sbjct: 248 NEIVNASDLRSMLLDPYANYVIQKALV 274
>gi|242089229|ref|XP_002440447.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
gi|241945732|gb|EES18877.1| hypothetical protein SORBIDRAFT_09g001090 [Sorghum bicolor]
Length = 878
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 147/305 (48%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 556 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 615
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K I+VV L +++ L+ + + G+ VI K
Sbjct: 616 IGR---VLALSLQMYGCRVIQKAIEVVDLD--LQTKMVAELEGHVMRCVRDQNGNHVIQK 670
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAAS 181
C+E H +FI + L+ H GC + +++ + +QI+ I +
Sbjct: 671 CIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCL 730
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L++ + GNYVVQHVL P AI L G V +S K S V++K L + N V
Sbjct: 731 LAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGNPVERQ 790
Query: 240 YIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+L S + L+V D++ NYV+Q L Q R + ++T+++ HL L+
Sbjct: 791 VLIGEMLGSTSESEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKTHLNTLK 846
Query: 296 VMKYG 300
YG
Sbjct: 847 KYTYG 851
>gi|90265098|emb|CAH67711.1| H0512B01.6 [Oryza sativa Indica Group]
Length = 795
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 19/305 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL+ +
Sbjct: 462 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA--- 518
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL FL S +G V+K+I VV + ++ LK + + G+ V
Sbjct: 519 ---DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISDQNGNHV 573
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
I KC+E F+ + L+ L H+ GC + +++ + + ++ I
Sbjct: 574 IQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVER 633
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A L+ + GNYVVQHVL P +I L G V+LS K S VV+K L + +
Sbjct: 634 AFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPD 693
Query: 237 AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q +++T L V +++ ++ HL L+
Sbjct: 694 EREGLIREIVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELK 749
Query: 296 VMKYG 300
+G
Sbjct: 750 NYTFG 754
>gi|115442517|ref|NP_001045538.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|57899216|dbj|BAD87365.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|113535069|dbj|BAF07452.1| Os01g0971900 [Oryza sativa Japonica Group]
gi|218189826|gb|EEC72253.1| hypothetical protein OsI_05392 [Oryza sativa Indica Group]
gi|222619956|gb|EEE56088.1| hypothetical protein OsJ_04928 [Oryza sativa Japonica Group]
Length = 894
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+
Sbjct: 573 GSRFIQQKLETASTEEKDMVFAEIMPQALTLMTDVFGNYVVQKFFEHGSSAQIK------ 626
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 627 ELADQLIGRVLALSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGQVMRCVR----DQNGN 682
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ + +QI+ I
Sbjct: 683 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEIL 742
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L+ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 743 QSVCLLATDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 802
Query: 237 AV--HYIVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 803 PVERQVLIGEMLGSSNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKAH 858
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 859 LNTLKKYTYG 868
>gi|115457242|ref|NP_001052221.1| Os04g0201200 [Oryza sativa Japonica Group]
gi|38345179|emb|CAE03335.2| OSJNBb0005B05.2 [Oryza sativa Japonica Group]
gi|113563792|dbj|BAF14135.1| Os04g0201200 [Oryza sativa Japonica Group]
Length = 795
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 146/305 (47%), Gaps = 19/305 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL+ +
Sbjct: 462 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA--- 518
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL FL S +G V+K+I VV + ++ LK + + G+ V
Sbjct: 519 ---DQLRGHFLQLSFQMYGCRVVQKVIDVVDLERKI--SIVGELKNSVLRCISDQNGNHV 573
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
I KC+E F+ + L+ L H+ GC + +++ + + ++ I
Sbjct: 574 IQKCIECVPEDHIPFVIEDILQKIYPLCTHQYGCRVIQRVLEHCHNPATQSAVMDEIVER 633
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A L+ + GNYVVQHVL P +I L G V+LS K S VV+K L + +
Sbjct: 634 AFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPD 693
Query: 237 AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q +++T L V +++ ++ HL L+
Sbjct: 694 EREGLIREIVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELK 749
Query: 296 VMKYG 300
+G
Sbjct: 750 NYTFG 754
>gi|215768674|dbj|BAH00903.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 559 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELA--- 615
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 616 ---DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR----DQNGN 668
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ +QI+ I
Sbjct: 669 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 728
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 729 QSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 788
Query: 237 AVHY--IVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 789 PVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 844
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 845 LNTLKKYTYG 854
>gi|222629930|gb|EEE62062.1| hypothetical protein OsJ_16846 [Oryza sativa Japonica Group]
Length = 878
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 555 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELA--- 611
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 612 ---DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR----DQNGN 664
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ +QI+ I
Sbjct: 665 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 724
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 725 QSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 784
Query: 237 AV--HYIVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 785 PVERQILISEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 840
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 841 LNTLKKYTYG 850
>gi|414587978|tpg|DAA38549.1| TPA: hypothetical protein ZEAMMB73_234832 [Zea mays]
Length = 764
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 19/305 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL +K+F + L + +G +V KF E ESQL I
Sbjct: 431 GSRFIQQKLEIASPDDREKIFPEILSNVIVLTTDVFGNYVIQKFFEFATESQL------I 484
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL L S+ +G V+K+++VV + ++ LK + + G+ V
Sbjct: 485 QLADQLKGRILELSLQMYGCRVVQKVLEVVGMDQKV--DIVHELKNYILKCIGDQNGNHV 542
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLISVN 178
I KC+E + F+ L L L H+ GC + +++ + I++ I
Sbjct: 543 IQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEIMQQ 602
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
L+ + GNYVVQHVL P I L G V LS K S V++K L++
Sbjct: 603 TFHLTDDKFGNYVVQHVLEHGKPEERSVIIQKLSGQVVTLSKQKFASNVIEKCLEFGTPE 662
Query: 239 HY--IVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q L ET L + +++ ++ HL L+
Sbjct: 663 ERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-ETCDDKYLEM---ILSSIKLHLNELK 718
Query: 296 VMKYG 300
YG
Sbjct: 719 NYTYG 723
>gi|119182519|ref|XP_001242388.1| hypothetical protein CIMG_06284 [Coccidioides immitis RS]
Length = 1208
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 72/302 (23%), Positives = 145/302 (48%), Gaps = 34/302 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 822 QHGCRYLQRKLEERIPENVQMIFLETHVHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 881
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V+ AL+ L+ G+ VI
Sbjct: 882 NAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVIKALRDKVVDLVQDLNGNHVI 937
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL + + A + C ID+ G +R Q++ I+ ++
Sbjct: 938 QKCL--------NRLSAADAQRC----------------IDHASGDQRAQLIAQITASSY 973
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
+L + GNYVVQ++L+L +P + +C G LS K S V++K L+ + +
Sbjct: 974 TLVQDPFGNYVVQYILDLAEPRFTEPLCQTFIGKVSMLSKQKFSSNVIEKCLRTADFQSR 1033
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L +++ ++ D + NYV+QTA+ + R++ L+ ++ L ++R
Sbjct: 1034 RLLIQEMLPVNELERMLRDSFANYVVQTAMDYADPETRVA----LIEAVRPILPSIRQTP 1089
Query: 299 YG 300
+G
Sbjct: 1090 HG 1091
>gi|168030336|ref|XP_001767679.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680999|gb|EDQ67430.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1134
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 28/315 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + F + LMS +G +V KF E + Q +
Sbjct: 809 QHGSRFIQQKLETATPEDKNMGFQEIVPRAITLMSDVFGNYVIQKFFEHGTQQQRRELAS 868
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLY----HVMSALKRLFKFLMMTK 114
++ L+ S+ +G ++K ++V V Q L+ HVM ++ +
Sbjct: 869 QLVGH---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR--------DQ 917
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILH 173
G+ VI KC+E K FI A + L+ H GC + +++ ++K I+
Sbjct: 918 NGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIME 977
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I + +L++ + GNYVVQHVL I L G V +S K S VV+K L+
Sbjct: 978 EILRSTCTLAQDQYGNYVVQHVLEHGRDHERSDIITKLAGQIVQMSQHKFASNVVEKCLE 1037
Query: 234 YQNAV--HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
Y +V+E+L + ++ LQ + D++ NYV+Q L ET + S + L+ ++
Sbjct: 1038 YGGPAERQILVDEMLGHTDENEPLQAMMKDQFANYVVQKVL-ETCDE---SQRELLLGRI 1093
Query: 288 QQHLAALRVMKYGSN 302
+ HL AL+ YG +
Sbjct: 1094 RVHLHALKKYTYGKH 1108
>gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|42409165|dbj|BAD10431.1| putative pumilio-family RNA-binding domain-containing protein(PPD1)
[Oryza sativa Japonica Group]
gi|215694322|dbj|BAG89315.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1006
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 689 QHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAT 748
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 749 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVR----DQNGNH 801
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 802 VIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILE 861
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 862 SACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDM 921
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV++ +D +L + D+Y NYV+Q L Q R + L+++++ HL
Sbjct: 922 TERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKGHL 977
Query: 292 AALRVMKYGSN 302
ALR YG +
Sbjct: 978 QALRKYTYGKH 988
Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 681 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 740
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ L GH + LSL G V+QK L+ I V EL I++ D+
Sbjct: 741 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 798
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ +E + + + +V+ + +A+L + YG
Sbjct: 799 GNHVIQKC-IECVPTEHIGF---VVSAFRGQVASLSMHPYG 835
>gi|222640878|gb|EEE69010.1| hypothetical protein OsJ_27957 [Oryza sativa Japonica Group]
Length = 1138
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 821 QHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAT 880
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 881 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVR----DQNGNH 933
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 934 VIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILE 993
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 994 SACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDM 1053
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV++ +D +L + D+Y NYV+Q L Q R + L+++++ HL
Sbjct: 1054 TERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKGHL 1109
Query: 292 AALRVMKYGSN 302
ALR YG +
Sbjct: 1110 QALRKYTYGKH 1120
Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 813 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 872
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ L GH + LSL G V+QK L+ I V EL I++ D+
Sbjct: 873 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 930
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ +E + + + +V+ + +A+L + YG
Sbjct: 931 GNHVIQKC-IECVPTEHIGF---VVSAFRGQVASLSMHPYG 967
>gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa Japonica Group]
gi|113624231|dbj|BAF24176.1| Os08g0519800 [Oryza sativa Japonica Group]
Length = 1001
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 80/311 (25%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 684 QHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAT 743
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 744 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVR----DQNGNH 796
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G + Q I+ I
Sbjct: 797 VIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILE 856
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 857 SACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDM 916
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV++ +D +L + D+Y NYV+Q L Q R + L+++++ HL
Sbjct: 917 TERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQR----ELLLSRVKGHL 972
Query: 292 AALRVMKYGSN 302
ALR YG +
Sbjct: 973 QALRKYTYGKH 983
Score = 43.9 bits (102), Expect = 0.091, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N + + + +A+SL GNYV+Q P
Sbjct: 676 HIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTP 735
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ L GH + LSL G V+QK L+ I V EL I++ D+
Sbjct: 736 EQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVREL--DGNIMRCVRDQN 793
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ +E + + + +V+ + +A+L + YG
Sbjct: 794 GNHVIQKC-IECVPTEHIGF---VVSAFRGQVASLSMHPYG 830
>gi|50284731|ref|XP_444793.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524095|emb|CAG57684.1| unnamed protein product [Candida glabrata]
Length = 786
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 143/290 (49%), Gaps = 11/290 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L + D +F +T ELM+ +G ++ K +E + Q + +
Sbjct: 475 QHGCRFLQKQLDVLGKKASDAIFEETKEYTVELMTDSFGNYLIQKLLERVTDDQR-VELA 533
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI + + S D G+ +++KLI+ ++ V+ +L+ L G+ VI
Sbjct: 534 KIAAPKMVEI--SKDPHGTRALQKLIECISTKEEAEI-VVKSLQPDTVILSKDLNGNHVI 590
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ + FI+ AA C +A H GC L +D+ ++ K + +
Sbjct: 591 QKCLQKLNPEDSQFIFDAAGNECGEIATHRHGCCVLQRCLDHGTKTQFKDLCEKLLKYID 650
Query: 181 SLSRHRSGNYVVQHVLNLE----DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ++++ E D I L+ + +LS+ K GS VV+K L+
Sbjct: 651 MLTFDPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFTELSVHKFGSNVVEKVLRTPV 710
Query: 237 AVHYIVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
I+ EL+N S ++ + +D +GNYV+QTAL + R ++++LV
Sbjct: 711 VSETIINELINEGSAEVQALLNDSFGNYVLQTAL-DISRDTNPYMYKKLV 759
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 182 LSRHRSGNYVVQHVL---NLEDP-FLIDAI---CFALRGHYVDLSLTKCGSFVVQKFLKY 234
LS+ +GN+V+Q L N ED F+ DA C + H + G V+Q+ L +
Sbjct: 580 LSKDLNGNHVIQKCLQKLNPEDSQFIFDAAGNECGEIATH-------RHGCCVLQRCLDH 632
Query: 235 QNAVHY--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ + E+LL +L D +GNYV+Q + + ++ ++V +L+
Sbjct: 633 GTKTQFKDLCEKLLKYIDMLTF--DPFGNYVVQYIISKETERNDYDYTYKIVNQLKPRFT 690
Query: 293 ALRVMKYGSN 302
L V K+GSN
Sbjct: 691 ELSVHKFGSN 700
>gi|225463345|ref|XP_002268751.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|296089553|emb|CBI39372.3| unnamed protein product [Vitis vinifera]
Length = 1017
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 144/315 (45%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F V +LM+ +G +V KF E N Q +
Sbjct: 702 QHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEHGNPEQRKELAS 761
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLY------HVMSALKRLFKFLMMTK 114
++ Q L S+ +G ++K + V+ L HVM ++ +
Sbjct: 762 QLAGQ---ILPLSLQMYGCRVIQKALDVIELEQKTLLVRELDGHVMRCVR--------DQ 810
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILH 173
G+ VI KC+E K FI A H L+ H GC + +++ + Q I+
Sbjct: 811 NGNHVIQKCIESVPTEKIGFIISAFRSHVATLSTHPYGCRVIQRVLEHCTDELQSQFIVD 870
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
I + SL++ + GNYV QHVL P I L+GH V LS K S VV+K L+
Sbjct: 871 EILESICSLAQDQYGNYVTQHVLERGKPHERSQIINKLKGHIVQLSQHKFASNVVEKCLE 930
Query: 234 YQ--NAVHYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
Y N ++EE++ +D +L + D++ NYVIQ L D + +QR L
Sbjct: 931 YGDVNERGLLIEEIIGHNEGNDNLLIMMKDQFANYVIQKIL------DICTDNQRESLFV 984
Query: 286 KLQQHLAALRVMKYG 300
+++ H AL+ YG
Sbjct: 985 RIRVHAHALKKYTYG 999
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N + + + +A+ L GNYV+Q +P
Sbjct: 694 HIVEFSADQHGSRFIQQKLENCSVEEKASVFKEVLPHASKLMTDVFGNYVIQKFFEHGNP 753
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ L G + LSL G V+QK L Q + +V EL +++ D
Sbjct: 754 EQRKELASQLAGQILPLSLQMYGCRVIQKALDVIELEQKTL--LVREL--DGHVMRCVRD 809
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+VIQ +E++ +++ +++ + H+A L YG
Sbjct: 810 QNGNHVIQKC-IESVPTEKIGF---IISAFRSHVATLSTHPYG 848
>gi|384490402|gb|EIE81624.1| hypothetical protein RO3G_06329 [Rhizopus delemar RA 99-880]
Length = 492
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KCL FIY A E+C+ +A H GC L ID ++ KQ++ I
Sbjct: 305 GNHVIQKCLHRFTTKHKQFIYDAVSENCIEVATHRHGCCVLQRCIDYSANNQTKQLVDEI 364
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+A +L + GNYVVQ+VL L D + + G+ LS K S V++K ++
Sbjct: 365 INHALTLVQDPYGNYVVQYVLELGDAQFSNRLIRQFIGNLSKLSTQKYSSNVMEKCIRVA 424
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ H +V+E++N D++ ++ D Y NYV+QTAL S H++L ++ L
Sbjct: 425 EEDTRHDLVQEMMNKDRLEKLLKDSYANYVVQTALDYASE----SQHRQLAEYIRPLLPT 480
Query: 294 LRVMKY 299
+R Y
Sbjct: 481 IRNTSY 486
>gi|297834954|ref|XP_002885359.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
gi|297331199|gb|EFH61618.1| hypothetical protein ARALYDRAFT_342166 [Arabidopsis lyrata subsp.
lyrata]
Length = 965
Score = 89.7 bits (221), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +LM+ +G +V KFIE +Q ++
Sbjct: 644 QHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVK 703
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q + S+ +G ++K ++V V Q L+ + + + + + G+
Sbjct: 704 QLAGQ---MVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVR----DQNGNH 756
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + F+ A L+ H GC + +++ I+ I
Sbjct: 757 VIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILE 816
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+K L++ ++
Sbjct: 817 SAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADS 876
Query: 238 V--HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+++EE++ + +L + D++ NYV+Q L + Q R + LV +++ HL
Sbjct: 877 TEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKIHL 932
Query: 292 AALRVMKYGSN 302
+LR YG +
Sbjct: 933 QSLRKYTYGKH 943
>gi|218195953|gb|EEC78380.1| hypothetical protein OsI_18154 [Oryza sativa Indica Group]
Length = 862
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 539 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSPTQIKELA--- 595
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 596 ---DQLIGRVLALSLQMYGCRVIQKAIEVVGLDQQTKMVAELDGHVMRCVR----DQNGN 648
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E H FI + L+ H GC + +++ +QI+ I
Sbjct: 649 HVIQKCIECIPQHAIQFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 708
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 709 QSVCLLAQDQYGNYVVQHVLEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLAFGN 768
Query: 237 AV--HYIVEELL---NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L N + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 769 PVERQILIGEMLGSTNESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 824
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 825 LNTLKKYTYG 834
>gi|82539941|ref|XP_724322.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478929|gb|EAA15887.1| 00806 domains.-related [Plasmodium yoelii yoelii]
Length = 923
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 135/278 (48%), Gaps = 32/278 (11%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQ+ L + +D+++ ELM +G ++ K IE C Q+ II K + D
Sbjct: 651 LQKILDKKNQSCIDEIYNEALEHIIELMMDPFGNYLCQKLIEVCTPEQIEKIIDKSS--D 708
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
+L + AS+ G+ +V+KLI+++ ++P + + ++LK L+ G+ V+ KCL
Sbjct: 709 EL-INASISVHGTRTVQKLIEMI-KTPSQIRKITNSLKNSIIILIKDINGNHVVQKCLVT 766
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + +FIY L++ + ++ H GC + ID+ ++++ +++ IS N L +
Sbjct: 767 LSSTQCNFIYDEILKNFVEVSTHRHGCCVIQRCIDSANEAQKELLINKISSNCLELVQDA 826
Query: 187 SGNYVVQHVLNLEDP----FLIDAICFALRGHYVD------------LSLTKCGSFVVQK 230
GNYVVQ++LN+ + +I+ + + H V + TKC ++
Sbjct: 827 FGNYVVQYILNMGNEKVNFEIIEKLLKDIEKHAVQKFSSNVIEKCLIIGTTKCRKMMING 886
Query: 231 FLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
LK + + V DKYGNYVIQ AL
Sbjct: 887 LLKKGKNI------------LKNVILDKYGNYVIQRAL 912
>gi|357148484|ref|XP_003574782.1| PREDICTED: pumilio homolog 5-like [Brachypodium distachyon]
Length = 983
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 81/311 (26%), Positives = 140/311 (45%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 666 QHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVFGNYVIQKFFEHGTPEQRRDLGT 725
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G V+K ++V+ Q L+ + + R + + G+
Sbjct: 726 KLVGH---VLPLSLQMYGCRVVQKALEVLELDQKIELVLELDGNIMRCVR----DQNGNH 778
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ + L+ H GC + +++ G + Q I+ I
Sbjct: 779 VIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILQ 838
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 839 SACVLAQDQYGNYVTQHVLEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGDF 898
Query: 237 -----AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV++ +D +L + D+Y NYV+Q L Q R + LV++++ HL
Sbjct: 899 AERDLLIREIVQQTEGNDTLLAMMKDQYANYVVQKILETCNDQQR----ELLVSRVKGHL 954
Query: 292 AALRVMKYGSN 302
ALR YG +
Sbjct: 955 QALRKYTYGKH 965
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/239 (22%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-----HVMSALKRLFKFLMMTKPGSSVILKCLEP 126
S D+ GS ++ KL A+ ++ H S + +F G+ VI K E
Sbjct: 663 SADQHGSRFIQQKLENCTAEEKAAVFAEVLPHATSLMTDVF--------GNYVIQKFFEH 714
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + + H L L+ GC + ++ ++ ++ +++ + N R +
Sbjct: 715 GTPEQRRDLGTKLVGHVLPLSLQMYGCRVVQKALEVLELDQKIELVLELDGNIMRCVRDQ 774
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVE 243
+GN+V+Q + I + + +G LS+ G V+Q+ L++ + I++
Sbjct: 775 NGNHVIQKCIECVPTEHIGFVVSSFQGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIID 834
Query: 244 ELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
E+L S +L A D+YGNYV Q L + +R ++++KL + + K+ SN
Sbjct: 835 EILQSACVL--AQDQYGNYVTQHVLEKGKSHER----AQIISKLAGQVVTMSQNKFASN 887
>gi|71407210|ref|XP_806089.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70869728|gb|EAN84238.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 370
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S+GD + + V ELM+ QY F+ K +
Sbjct: 16 QHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFD---------- 65
Query: 59 ILKITFQDQLFLLASV----------DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFK 108
+ QD + +A V G+ SV+K+++ +A + + AL +
Sbjct: 66 ---MMPQDVRYKVARVAAPKIISIALTPHGTFSVQKMVETIASREEMDI-LREALSKDVV 121
Query: 109 FLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 168
L+ G+ VI K L+ + +FIY A C+ +A ++QGC L ++ S+R
Sbjct: 122 RLVKDAHGNHVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQR 181
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
+++ I ++ GNYV+Q+VL D D I A H V L + K S V+
Sbjct: 182 ATLVNQILRCCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVI 241
Query: 229 QKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
+K L+ Q VE + + D + ++ D +GNYV+QTAL
Sbjct: 242 EKVLRGASQPVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALT 284
>gi|30685690|ref|NP_188660.3| pumilio 5 [Arabidopsis thaliana]
gi|313471415|sp|Q9LJX4.2|PUM5_ARATH RecName: Full=Pumilio homolog 5; Short=APUM-5; Short=AtPUM5
gi|332642831|gb|AEE76352.1| pumilio 5 [Arabidopsis thaliana]
Length = 961
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +LM+ +G +V KFIE +Q ++
Sbjct: 640 QHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVK 699
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q + S+ +G ++K ++V V Q L+ + + + + + G+
Sbjct: 700 QLAGQ---MVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVR----DQNGNH 752
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + F+ A L+ H GC + +++ I+ I
Sbjct: 753 VIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILE 812
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+K L++ ++
Sbjct: 813 SAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADS 872
Query: 238 V--HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+++EE++ + +L + D++ NYV+Q L + Q R + LV +++ HL
Sbjct: 873 TEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKIHL 928
Query: 292 AALRVMKYGSN 302
+LR YG +
Sbjct: 929 QSLRKYTYGKH 939
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 54/233 (23%), Positives = 103/233 (44%), Gaps = 11/233 (4%)
Query: 73 SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKN 132
SVD+ GS +++ ++ + V S + LM G+ VI K +E +
Sbjct: 637 SVDQHGSRFIQQKLEHCSDEEKA--SVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQR 694
Query: 133 DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVV 192
+ + + + L+ GC + ++ + ++ +++ + N R ++GN+V+
Sbjct: 695 EELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVI 754
Query: 193 QHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSD 249
Q + I + A RG LS G V+Q+ L++ H I++E+L S
Sbjct: 755 QKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILES- 813
Query: 250 QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+A D+YGNYV Q L +R ++++ KL ++ + KY SN
Sbjct: 814 -AFALAHDQYGNYVTQHVLERGKPDER----RQIIEKLTGNVVQMSQHKYASN 861
>gi|9293981|dbj|BAB01884.1| RNA binding protein-like [Arabidopsis thaliana]
Length = 962
Score = 89.4 bits (220), Expect = 2e-15, Method: Composition-based stats.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +LM+ +G +V KFIE +Q ++
Sbjct: 641 QHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREELVK 700
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q + S+ +G ++K ++V V Q L+ + + + + + G+
Sbjct: 701 QLAGQ---MVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVR----DQNGNH 753
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + F+ A L+ H GC + +++ I+ I
Sbjct: 754 VIQKCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILE 813
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A +L+ + GNYV QHVL P I L G+ V +S K S VV+K L++ ++
Sbjct: 814 SAFALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADS 873
Query: 238 V--HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+++EE++ + +L + D++ NYV+Q L + Q R + LV +++ HL
Sbjct: 874 TEREFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQR----EILVQRMKIHL 929
Query: 292 AALRVMKYGSN 302
+LR YG +
Sbjct: 930 QSLRKYTYGKH 940
>gi|302759032|ref|XP_002962939.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
gi|300169800|gb|EFJ36402.1| hypothetical protein SELMODRAFT_1983 [Selaginella moellendorffii]
Length = 337
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 26/314 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ---LAL 57
+ GS+++Q+KL + + +F V F LM+ +G +V KF E N Q LA
Sbjct: 31 QHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELAN 90
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKP 115
+++ L S+ +G ++K ++V V Q L+ + + R + +
Sbjct: 91 LLVG------HMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVR----DQN 140
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHL 174
G+ VI KC+E K FI A L L+ H GC + +++ +++ I+
Sbjct: 141 GNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEE 200
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I SL++ + GNYV+QHVL P I L G V +S K S VV+K L++
Sbjct: 201 ILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEF 260
Query: 235 QNAV--HYIVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+V+E+L + + + D++ NYV+Q L Q R + L+ +++
Sbjct: 261 GGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQR----EMLLGRIK 316
Query: 289 QHLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 317 VHLHALKKYTYGKH 330
>gi|354543476|emb|CCE40195.1| hypothetical protein CPAR2_102330 [Candida parapsilosis]
Length = 860
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 127/289 (43%), Gaps = 36/289 (12%)
Query: 12 SSGDSRILDK-----LFWVVSGFTFELMSGQYGRFVFGKFIES-CNESQLALIILKITFQ 65
S GD I D+ +F + LM +G ++ K +E NE +L LI +
Sbjct: 540 SKGDGEIKDESVSTMIFNELHDEVVNLMLDPFGNYLIQKLVECVSNEQRLELI----KYS 595
Query: 66 DQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP---------- 115
F ++D G+ +++KLI+ V S V+ + +P
Sbjct: 596 SSQFNRIALDSHGTRALQKLIECVGASHDNQEEVVDENDSASLIIKSLEPSIVLLSRDLN 655
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ KCL N N IY +C +ACH GC + +D + + + H +
Sbjct: 656 GNHVVQKCLINLSNKVNQVIYDTITSNCEVVACHRHGCCVIQRCLDYGNDRQVETLSHEV 715
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + GNYVVQ+VL+ D ID I LR H+ LS+ K GS V++K L+ +
Sbjct: 716 TTKLGVFTTDPYGNYVVQYVLSHGDSQSIDTIFAYLRDHFYQLSIHKFGSNVLEKSLRLE 775
Query: 236 NA--------------VHYIVEEL--LNSDQILQVASDKYGNYVIQTAL 268
+++EL L+SDQ V +D +GNYV+QT L
Sbjct: 776 QKGKKENEEENNSSTRSASLIDELLKLSSDQFSTVLNDSFGNYVLQTCL 824
>gi|8778970|gb|AAF79885.1|AC021198_5 Contains similarity to a putative RNA-binding protein AAF18550
gi|6587864 from Arabidopsis thaliana BAC T11I11
gb|AC012680. It contains Pumilio-family RNA binding
domains PF|00806 [Arabidopsis thaliana]
Length = 559
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 152/322 (47%), Gaps = 45/322 (13%)
Query: 3 GSQYLQEKLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
G + LQ+ + G DS+++ F + EL G ++ K + +E Q +I+
Sbjct: 227 GCRALQKLVEEGTVLDSKVI---FLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQRTMIV 283
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+T + + + ++ G+ ++K+IK V ++ + V SAL+ F L+ G V
Sbjct: 284 SVLTSKPRELIKICLNTNGTRVIQKMIKTV-KTKQQIALVKSALEPGFLVLVNDSNGYHV 342
Query: 120 ILKCLE---PSYNH--------------------KND--------FIYQAALEHCLYLAC 148
+ CLE P+ N +D F+ +AA E+C LA
Sbjct: 343 LQSCLEFLVPNDNKLRLTKLSHILISFLLFLTYVSSDECCEIWCQFVVEAATEYCAQLAT 402
Query: 149 HEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAIC 208
H+ GC L + N G + ++++ IS ++ LS+ GNYVVQ +++ + + +
Sbjct: 403 HQYGCYVLQCSLINTVGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSSV--NLL 460
Query: 209 FALRGHYVDLSLTKCGSFVVQKFL-KYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTA 267
R H ++L+ K S V++K L KY + IV ELL+ Q+ D Y NYVIQTA
Sbjct: 461 LPFRTHCIELATQKFSSHVIEKCLRKYPESRAEIVRELLSYPNFEQLLQDPYANYVIQTA 520
Query: 268 LVETMRQDRLSVHQRLVTKLQQ 289
L T + +V RLV K+++
Sbjct: 521 LSVT----KGAVRARLVEKVKR 538
>gi|302757830|ref|XP_002962338.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
gi|300169199|gb|EFJ35801.1| hypothetical protein SELMODRAFT_78497 [Selaginella moellendorffii]
Length = 353
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 26/314 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ---LAL 57
+ GS+++Q+KL + + +F V F LM+ +G +V KF E N Q LA
Sbjct: 2 QHGSRFIQQKLEAATAEEKAMVFDEVLPQAFTLMTDVFGNYVIQKFFEHGNSQQRRELAN 61
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKP 115
+++ L S+ +G ++K ++V V Q L+ + + R + +
Sbjct: 62 LLVG------HMLELSLQMYGCRVIQKALEVCDVDQQTQLVVELDGHVMRCVR----DQN 111
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHL 174
G+ VI KC+E K FI A L L+ H GC + +++ +++ I+
Sbjct: 112 GNHVIQKCIECVPPDKIQFIISAFYGQVLVLSTHPYGCRVIQRVLEHCTDDQKQAGIMEE 171
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I SL++ + GNYV+QHVL P I L G V +S K S VV+K L++
Sbjct: 172 ILGATCSLAQDQYGNYVIQHVLEHGKPHERSEIITKLAGQIVQMSQHKFASNVVEKCLEF 231
Query: 235 QNAV--HYIVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+V+E+L + + + D++ NYV+Q L Q R + L+ +++
Sbjct: 232 GGPAERQILVDEMLGTTDENAPLQAMMKDQFANYVVQKVLETCSDQQR----EMLLGRIK 287
Query: 289 QHLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 288 VHLHALKKYTYGKH 301
>gi|398015064|ref|XP_003860722.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
gi|322498944|emb|CBZ34017.1| RNA-binding regulatory protein (pumilio family), putative
[Leishmania donovani]
Length = 554
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
Query: 1 EEGSQYLQEKLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALI 58
+ G +YLQ L + D+ L + + ELM+ QY F+ K + ++ + +
Sbjct: 209 QHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDDVRYKVA 268
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + S+ G+ SV+K+I+ ++ + + AL + L+ G+
Sbjct: 269 VVAAPH----ICMISLTPHGTFSVQKMIETISTREEMKI-ICEALAKDVVRLVKDAHGNH 323
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K L+ ++IY+A C+ +A ++QGC L +++ ++ ++ +
Sbjct: 324 VIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLAC 383
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-- 236
+++ GNYV+Q+VL D + D I A H V LS+ K S V++K L+ +
Sbjct: 384 CLQIAQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVLRGASRP 443
Query: 237 -AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
V Y+ EE+ N + I + D YGNYV+QTAL
Sbjct: 444 VQVMYM-EEMCNPEIISHLIQDDYGNYVLQTALT 476
>gi|146086139|ref|XP_001465465.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
gi|134069563|emb|CAM67886.1| putative pumillio protein 3 [Leishmania infantum JPCM5]
Length = 554
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 11/274 (4%)
Query: 1 EEGSQYLQEKLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALI 58
+ G +YLQ L + D+ L + + ELM+ QY F+ K + ++++ +
Sbjct: 209 QHGCRYLQRWLDTNCDTEALQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDDARYKVA 268
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + S+ G+ SV+K+I+ ++ + + AL + L+ G+
Sbjct: 269 VVAAPH----ICMISLTPHGTFSVQKMIETISTREEMKI-ICEALAKDVVRLVKDAHGNH 323
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K L+ ++IY+A C+ +A ++QGC L +++ ++ ++ +
Sbjct: 324 VIQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLAC 383
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-- 236
+ + GNYV+Q+VL D + D I A H V LS+ K S V++K L+ +
Sbjct: 384 CLQIVQDPFGNYVLQYVLEAHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVLRGASRP 443
Query: 237 -AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
V Y+ EE+ N + I + D YGNYV+QTAL
Sbjct: 444 VQVMYM-EEMCNPEIISHLIQDDYGNYVLQTALT 476
>gi|325187460|emb|CCA21998.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 888
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 148/316 (46%), Gaps = 27/316 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVS-GFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G + LQE+L D + L ++ + S E+M +G ++F K I +E Q I+
Sbjct: 539 QNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIV 598
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------------PPLLYHVMSALKRLF 107
+ + A+++ G+ SV+K++++ A S P L+ H ALK
Sbjct: 599 RAVCPH---LMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVH---ALKDDA 652
Query: 108 KFLMMTKPGSSVILKCLEPSYNHK-NDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 166
L + G+ VI + L+ +N K FI+ A C + H GC L +D +
Sbjct: 653 VRLCIDSNGNHVIQRALQ-YFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVT 711
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
++K+++ + +A L + GNYVVQ+VL+ I GH +LS+ K S
Sbjct: 712 QKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSN 771
Query: 227 VVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
VV+K L+ + VEEL+ ++ ++ D++ NYV+Q AL ++ LV
Sbjct: 772 VVEKCLEKAPERIRRRYVEELIVCAKMQRLLQDQFANYVVQRALCVCAESQCMA----LV 827
Query: 285 TKLQQHLAALRVMKYG 300
+ HL+A++ G
Sbjct: 828 AAICPHLSAMKNSSNG 843
>gi|430811325|emb|CCJ31248.1| unnamed protein product [Pneumocystis jirovecii]
Length = 995
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 5/193 (2%)
Query: 78 GSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQ 137
G+ +V+K+I+ ++ +P + V++AL L+ G+ VI KCL N FI+
Sbjct: 3 GTRAVQKMIEYLS-TPEQIKIVINALNSSVVTLIKDLNGNHVIQKCLNKLSNDDIQFIFD 61
Query: 138 AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
A +C+ +A H GC L ID+ S++ QI I+ +A +L + GNYVVQ++L+
Sbjct: 62 AICSNCIEVATHRHGCCVLQRCIDHASDSQKVQIAKEITNHALNLVQDPFGNYVVQYILD 121
Query: 198 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHYIVEELLNSDQILQVA 255
L D + + G+ LS+ K S V++K ++ ++EEL +I +
Sbjct: 122 LGDARFSEPLIHRFIGNICLLSVQKFSSNVIEKCIRMAEPPTRSLLIEEL--PKKIGSLI 179
Query: 256 SDKYGNYVIQTAL 268
D Y NYVIQT+L
Sbjct: 180 RDSYANYVIQTSL 192
>gi|407837279|gb|EKF99706.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 561
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S+GD + + V ELM+ QY F+ K + + +
Sbjct: 207 QHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMPQD----V 262
Query: 59 ILKIT-FQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
K+ Q + ++ G+ SV+K+++ +A + + AL + L+ G+
Sbjct: 263 RYKVACVAAQKIISIALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLVKDAHGN 321
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K L+ + +FIY A C+ +A ++QGC L ++ S+R +++ I
Sbjct: 322 HVIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILR 381
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQ 235
++ GNYV+Q+VL D D I A H V L + K S V++K L+ Q
Sbjct: 382 CCLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGASQ 441
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
VE + + D + ++ D +GNYV+QTAL
Sbjct: 442 PVQEMYVETMCSPDVVSRLIQDDFGNYVLQTALT 475
>gi|4261598|gb|AAD13898.1|S58126_1111111 Unknown [Saccharomyces cerevisiae]
gi|234327|gb|AAB19616.1| 98 kda [Saccharomyces cerevisiae]
Length = 888
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D++F +T ELM+ +G ++ K +E Q +++
Sbjct: 575 QHGCRFLQKQLDILGSKAADRIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 633
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 634 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 690
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 691 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 750
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 751 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 808
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 809 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 852
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 607 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 666
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 667 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 722
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 723 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 777
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 778 THKIVHLLKPRAIELSIHKFGSN 800
>gi|224097831|ref|XP_002311080.1| predicted protein [Populus trichocarpa]
gi|222850900|gb|EEE88447.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + LM+ +G +V KF++ ESQ + ++
Sbjct: 685 GSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVFGNYVIQKFLDQGTESQRIELASQL 744
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T L S+ +G ++K ++V+ +++ L + + G+ VI K
Sbjct: 745 TGH---VLPLSLQMYGCRVIQKALEVIDVD--RQTQMVAELDGSVMKCIRDQNGNHVIQK 799
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNAAS 181
C+E + FI A + L+ H GC + +++ K +Q I+ I + +
Sbjct: 800 CIECVPGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIMDEIMQSVCA 859
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVH 239
L++ + GNYV+QHVL P I L G V +S K S VV+K L + +
Sbjct: 860 LAQDQYGNYVIQHVLEHGKPQQRSVIIRKLAGQIVLMSQQKFASNVVEKCLTFGGPDERQ 919
Query: 240 YIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L S ++ LQ + D +GNYV+Q L ET L + ++++++ HL+AL+
Sbjct: 920 LLVNEMLGSTDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIRIHLSALK 975
Query: 296 VMKYG 300
YG
Sbjct: 976 RYTYG 980
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 23/239 (9%)
Query: 73 SVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
S D++GS +++ ++ + P ++ H ++ + +F G+ VI K L+
Sbjct: 680 STDQYGSRFIQQKLETASVEETNKIFPEIIPHALTLMTDVF--------GNYVIQKFLDQ 731
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + H L L+ GC + ++ + R+ Q++ + + R +
Sbjct: 732 GTESQRIELASQLTGHVLPLSLQMYGCRVIQKALEVIDVDRQTQMVAELDGSVMKCIRDQ 791
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVE 243
+GN+V+Q + I I A G V LS G V+Q+ L++ N I++
Sbjct: 792 NGNHVIQKCIECVPGDRIQFITSAFYGQVVALSTHPYGCRVIQRVLEHCKDMNTQQVIMD 851
Query: 244 ELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
E++ S + +A D+YGNYVIQ L Q R SV ++ KL + + K+ SN
Sbjct: 852 EIMQS--VCALAQDQYGNYVIQHVLEHGKPQQR-SV---IIRKLAGQIVLMSQQKFASN 904
>gi|357135024|ref|XP_003569112.1| PREDICTED: pumilio homolog 1-like, partial [Brachypodium
distachyon]
Length = 639
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+
Sbjct: 317 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIK------ 370
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV AQ ++ + + R + + G+
Sbjct: 371 ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAELDGHIMRCVR----DQNGN 426
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E FI + L+ H GC + +++ +QI+ I
Sbjct: 427 HVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 486
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 487 QSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKFASNVIEKCLAFGN 546
Query: 237 AV--HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L S + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 547 PVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKAH 602
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 603 LNTLKKYTYG 612
>gi|365986156|ref|XP_003669910.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
gi|343768679|emb|CCD24667.1| hypothetical protein NDAI_0D03530 [Naumovozyma dairenensis CBS 421]
Length = 809
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L + DK+F T ELM+ +G ++ K IE + Q +
Sbjct: 499 QHGCRFLQKQLDILGTEAADKIFEETKYHTIELMTDSFGNYLIQKLIERVSTEQRTELAK 558
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV---AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
+ Q F+ ++D G+ +++KLI+ + ++ ++ + ++ +L K L G+
Sbjct: 559 IASPQ---FVEIALDPHGTRALQKLIECIDTDDEAKIIVASLSGSIVQLSKDLN----GN 611
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KCL+ + FI+ A ++ + +A H GC L D+ + + + +
Sbjct: 612 HVVQKCLQKLHPKDFQFIFDATCQNSVDIATHRHGCCVLQRCFDHGTKEQCETLCDELLK 671
Query: 178 NAASLSRHRSGNYVVQHVLNLE---DPF-LIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ L+ GNYVVQ+++ E D F I L+ +LS+ K GS V++K L+
Sbjct: 672 HVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKFGSNVIEKLLR 731
Query: 234 YQNAVHYIVEELLNSD-QILQVASDKYGNYVIQTAL 268
A ++ ELLN I + +D YGNYV+QTAL
Sbjct: 732 TPVATENMILELLNHKADIPNLLNDSYGNYVLQTAL 767
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 27/241 (11%)
Query: 69 FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSY 128
FL +D G+ + K+ + YH + + F G+ +I K +E
Sbjct: 504 FLQKQLDILGTEAADKIFEETK------YHTIELMTDSF--------GNYLIQKLIERVS 549
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK-GSRRKQILHLISVNAASLSRHRS 187
+ + + A + +A G L I+ + K I+ +S + LS+ +
Sbjct: 550 TEQRTELAKIASPQFVEIALDPHGTRALQKLIECIDTDDEAKIIVASLSGSIVQLSKDLN 609
Query: 188 GNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYI 241
GN+VVQ L P F+ DA C + VD++ + G V+Q+ + + +
Sbjct: 610 GNHVVQKCLQKLHPKDFQFIFDATC----QNSVDIATHRHGCCVLQRCFDHGTKEQCETL 665
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
+ELL + ++ D +GNYV+Q + + +D+ ++V L+ +A L V K+GS
Sbjct: 666 CDELLK--HVDKLTLDPFGNYVVQYIITKETEKDKFDYTHKIVHLLKPKIAELSVHKFGS 723
Query: 302 N 302
N
Sbjct: 724 N 724
>gi|156084740|ref|XP_001609853.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
gi|154797105|gb|EDO06285.1| pumilio-family RNA binding repeat containing protein [Babesia
bovis]
Length = 656
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 141/304 (46%), Gaps = 12/304 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G + LQ+ L + D +++ + V +LM +G ++ K I C+ Q+ II
Sbjct: 243 QTGCRLLQKMLETEDYLVVETILEGVMDNLVDLMMDPFGNYLCQKLITVCSTQQIDAII- 301
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + S++ G+ ++++LI+V+ + P + V L + L+ G+ VI
Sbjct: 302 --DVAGPMLIDISLNMHGTRTLQRLIEVLHE-PKQIAKVTKLLSPSVETLVTDINGNHVI 358
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL +FI+QA L+ L A H GC + ID +R +++ + +
Sbjct: 359 QKCLSVLPPEDCEFIHQAILKKSLMFATHRHGCCVIQRCIDAANTRQRDELVETLIEHTL 418
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNAV 238
L + GNYVVQ++L L++ + I A+ + K S V++K L +
Sbjct: 419 ELIQDPFGNYVVQYILKLKNMDVNARIVKAVAPKATLYAKHKFSSNVIEKCLILTHTRIR 478
Query: 239 HYIVEELLNS--DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+ +VE+ + + D + + +GNYVIQ L R D L+ +++ H+ LR
Sbjct: 479 NILVEKFVKAPYDTLKDLMLHPFGNYVIQRVLSVAQRSDL----DELLKRMRPHIDELRT 534
Query: 297 MKYG 300
M G
Sbjct: 535 MSTG 538
>gi|302142233|emb|CBI19436.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
++ + E+C +A + GC L + ++N +G R+Q++ I NA L+ R GNYVVQ
Sbjct: 12 YLIKEVAENCFEIATNRSGCCVLQSCVENSQGELREQLMAEIIANALPLAEDRYGNYVVQ 71
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL---KYQNAVHYIVEELLNSDQ 250
H++ L+ P +I + G ++ LS K GS VV+KFL K + + I+ ELL S
Sbjct: 72 HLMGLKIPEVITNLLKQFEGTFISLSCNKYGSNVVEKFLIESKDEQSSQIII-ELLRSPN 130
Query: 251 ILQVASDKYGNYVIQTAL 268
+ + D +GN+VIQ+AL
Sbjct: 131 VSMLLLDPFGNFVIQSAL 148
>gi|313471417|sp|Q9XI17.2|PUM20_ARATH RecName: Full=Putative pumilio homolog 20; Short=APUM-20;
Short=AtPUM20
Length = 332
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 120/232 (51%), Gaps = 8/232 (3%)
Query: 45 KFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALK 104
+ I ++ +L + +T FL+ + + GS ++KL+ L +A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 105 RLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 164
R F ++ K S V+ + + K +Y+ L + ++A + G + LN+ I +
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVFDKKKKKAMYEHILHYASHIARDKHGNLALNDIITD-- 184
Query: 165 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCG 224
+ R ++ +I+ A LS GN+V+Q VL L D + I +LRGH+VDLS K G
Sbjct: 185 -AYRNKLFDVIAHKALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYG 243
Query: 225 SFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQ 274
S+VV L+ + ++ +VEEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 244 SYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 295
>gi|159112491|ref|XP_001706474.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
gi|157434571|gb|EDO78800.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia ATCC
50803]
Length = 652
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 18/300 (6%)
Query: 3 GSQYLQEKLS--SGDSRILDKLF---WVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
G + LQ+ L+ SR L +F + L+ G + F K IES + SQ
Sbjct: 333 GCKILQQYLADFPDKSRYLLDVFIAEYSTPSLMESLLIHPSGNYCFQKIIESSDASQRLR 392
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKP 115
I+L I QD LF + + G+ S++KL + V+ + ++ + A R+ K ++
Sbjct: 393 ILLLI--QDSLFDICQ-NLHGTRSIQKLFERVSSDEEKAIIAQQLGAGDRIIKLIVDIN- 448
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ + +C+E FIY + + + H+ GC + +D ++R QI+ I
Sbjct: 449 GNHCVQRCIETFAPKDCTFIYDQIIRELVLVGTHQHGCCIIQRCLDLCSEAQRVQIVTAI 508
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLI-----DAICFALRGHYVDLSLTKCGSFVVQK 230
+ L R GNYV Q+ L + L D + + GH L K S V+K
Sbjct: 509 KNHVMELIVDRFGNYVFQYSLEKANNGLCGLISADDLIRPILGHEGSLVNQKFSSHAVEK 568
Query: 231 FLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
LKY + I E L+ S L A DK+GNYV+Q A + + + ++ QR++T +
Sbjct: 569 CLKYGSRRMRTLITENLMASSSFLSSAMDKFGNYVVQKAFIGATDEQKRTISQRVLTSPE 628
>gi|6321424|ref|NP_011501.1| Puf4p [Saccharomyces cerevisiae S288c]
gi|1723801|sp|P25339.2|PUF4_YEAST RecName: Full=Pumilio homology domain family member 4
gi|1322473|emb|CAA96714.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285812184|tpg|DAA08084.1| TPA: Puf4p [Saccharomyces cerevisiae S288c]
gi|392299246|gb|EIW10340.1| Puf4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 575 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 633
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 634 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 690
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 691 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 750
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 751 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 808
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 809 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 852
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 607 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 666
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 667 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 722
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 723 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 777
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 778 THKIVHLLKPRAIELSIHKFGSN 800
>gi|300123315|emb|CBK24588.2| unnamed protein product [Blastocystis hominis]
Length = 497
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 129/278 (46%), Gaps = 6/278 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ L + +++ ++ V ELM +G ++F K ++ + Q ++ K+
Sbjct: 183 GCRALQSCLDNASQKMIPIIYEEVGDSLTELMMDSFGNYLFQKLLDVSSVEQRREVLRKV 242
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + AS D G+ SV+KLI++ +L +M AL+ L G+ VI +
Sbjct: 243 KHK---IVAASFDVHGTRSVQKLIQICHGQEDMLKDIMDALRGNIAKLSSDSNGNHVIQR 299
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL ++Y+ ++ C+ ++ GC + +D +L I +A L
Sbjct: 300 CLNHMPEEYKVYVYEEVVKSCVNISMQRHGCCVVQRCLDFAPEKYHNMMLDAIVNSAVEL 359
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
GNYV+Q+++ + I + G V LS K S V++K L + ++ +
Sbjct: 360 ICDPFGNYVIQYLIEKGKESEKERIARCVLGKVVALSCQKYSSNVIEKILLFAPESVRNE 419
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTAL-VETMRQDRL 277
+V EL ++ V D Y NYVIQ AL +E+ Q R+
Sbjct: 420 VVAELAECPKLRDVLHDIYANYVIQQALKLESKGQQRM 457
>gi|157869162|ref|XP_001683133.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
gi|68224016|emb|CAJ05068.1| putative pumillio protein 3 [Leishmania major strain Friedlin]
Length = 569
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 7/272 (2%)
Query: 1 EEGSQYLQEKLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G +YLQ L + D L + + ELM+ QY F+ K + + +
Sbjct: 209 QHGCRYLQRWLDTNCDPEALQVMMNEIIPHVGELMTDQYANFLIQKLFDIMPDDVRYKVA 268
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ Q + S+ G+ SV+K+I+ ++ + + AL + L+ G+ V
Sbjct: 269 IVAAPQ---ICMISLTPHGTFSVQKMIETISTREEMEI-ISEALCKDVVRLVKDAHGNHV 324
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I K L+ ++IY+A C+ +A ++QGC L +++ ++ ++ +
Sbjct: 325 IQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEHASPRQKAALVDQVLACC 384
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+ + GNYV+Q+VL D + D I A H V LS+ K S V++K L+ +
Sbjct: 385 LQIVQDPFGNYVLQYVLEEHDSKINDTIALAFLPHLVQLSMNKFSSNVMEKVLRGASGPV 444
Query: 240 YI--VEELLNSDQILQVASDKYGNYVIQTALV 269
+ +EE+ N + I + D YGNYV+QTAL
Sbjct: 445 QVMYMEEMCNPEIISHLIQDDYGNYVLQTALT 476
>gi|401421895|ref|XP_003875436.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322491673|emb|CBZ26946.1| RNA-binding regulatory protein (pumilio family),putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 568
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 9/273 (3%)
Query: 1 EEGSQYLQEKLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G +YLQ L + D L + + ELM+ QY F+ K + + +
Sbjct: 209 QHGCRYLQRWLDTNCDPETLQVMMDEIIPHVGELMTDQYANFLIQKLFDIMPDDVRYKVA 268
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ Q + S+ G+ SV+K+I+ ++ + AL + L+ G+ V
Sbjct: 269 IVAAPQ---ICMISLTPHGTFSVQKMIETISTREETEI-ICEALAKDVVRLVKDAHGNHV 324
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I K L+ ++IY+A C+ +A ++QGC L +++ ++ ++ +
Sbjct: 325 IQKVLQRFDFDDKEYIYRAVSTDCVSIAKNKQGCCVLQRSLEHASPRQKAALVDQVLACC 384
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--- 236
+ + GNYV+Q+VL D + D I FA H V LS+ K S V++K L+ +
Sbjct: 385 LQIVQDPFGNYVLQYVLEAHDSKINDTIAFAFLPHLVHLSMNKFSSNVMEKVLRGASRPV 444
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
V Y+ EE+ N I + D YGNYV+QTAL
Sbjct: 445 QVMYM-EEMCNPGIISHLIQDDYGNYVLQTALT 476
>gi|349578206|dbj|GAA23372.1| K7_Puf4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 889
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 576 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 634
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 635 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 691
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 692 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 751
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 752 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 809
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 810 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 853
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 608 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 667
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 668 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 723
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 724 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 778
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 779 THKIVHLLKPRAIELSIHKFGSN 801
>gi|365765603|gb|EHN07110.1| Puf4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 585 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 643
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 644 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 700
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 701 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 760
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 761 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 818
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 819 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 862
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 617 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 676
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 677 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 732
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 733 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 787
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 788 THKIVHLLKPRAIELSIHKFGSN 810
>gi|323333456|gb|EGA74850.1| Puf4p [Saccharomyces cerevisiae AWRI796]
Length = 896
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 583 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 641
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 642 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 698
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 699 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 758
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 759 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 816
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 817 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 860
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 615 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 674
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 675 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 730
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 731 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 785
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 786 THKIVHLLKPRAIELSIHKFGSN 808
>gi|190406983|gb|EDV10250.1| protein PUF4 [Saccharomyces cerevisiae RM11-1a]
Length = 894
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 581 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 639
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 640 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 696
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 697 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 756
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 757 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 814
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 815 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 858
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 613 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 672
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 673 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 728
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 729 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 783
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 784 THKIVHLLKPRAIELSIHKFGSN 806
>gi|151943274|gb|EDN61587.1| pumilio-homology domain family [Saccharomyces cerevisiae YJM789]
gi|259146487|emb|CAY79744.1| Puf4p [Saccharomyces cerevisiae EC1118]
Length = 892
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 15/284 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 579 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 637
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 638 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 694
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 695 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 754
Query: 181 SLSRHRSGNYVVQHVLNLE------DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L+ GNYVVQ+++ E D I L+ ++LS+ K GS V++K LK
Sbjct: 755 KLTLDPFGNYVVQYIITKEAEKNKYD--YTHKIVHLLKPRAIELSIHKFGSNVIEKILKT 812
Query: 235 QNAVHYIVEELLNS---DQILQVASDKYGNYVIQTALVETMRQD 275
++ E+LN+ I + +D YGNYV+QTAL + +Q+
Sbjct: 813 AIVSEPMILEILNNGGETGIQSLLNDSYGNYVLQTALDISHKQN 856
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 611 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 670
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 671 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 726
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 727 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 781
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 782 THKIVHLLKPRAIELSIHKFGSN 804
>gi|348675055|gb|EGZ14873.1| hypothetical protein PHYSODRAFT_545979 [Phytophthora sojae]
Length = 906
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 154/343 (44%), Gaps = 56/343 (16%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVS-GFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G + LQE+L D L ++ + S E+M +G ++F K +E NE Q +II
Sbjct: 463 QNGCRLLQEQLDYEDRADLCEVIYQESLEHLAEMMVDPFGNYLFQKLLERVNEKQRLVII 522
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH--------------------- 98
+++ + A+++ G+ SV+K+++V A SP ++
Sbjct: 523 RRVSSN---LVAAALNLHGTRSVQKVVEVCATSPDVIEEDYDDDDGDEYGYVNDREERPE 579
Query: 99 -------------VMSALKRLFKFLMMTKPGSSVILKCLE---PSYNHKNDFIYQAALEH 142
++ ALK L + G+ VI + L+ P YN F++ A +
Sbjct: 580 GGERRRTTSLPDIIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ---FVFDAVCKE 636
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN---LE 199
C + H GC L +D +++ +++ + A L + GNYVVQ+VL+ E
Sbjct: 637 CTTVGTHRHGCCVLQRCLDAANKAQKAEVIEQVERQAMKLMQDPYGNYVVQYVLDSCTAE 696
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
+ F + GH +LS+ K S V++K L+ + + E+ + ++ ++ D
Sbjct: 697 EAF---GVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQD 753
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
++ NYV+Q AL + L LV ++ HLAA++ G
Sbjct: 754 QFANYVVQRALCVCAEEQCL----LLVKAIRPHLAAMKNTSGG 792
>gi|15236527|ref|NP_192596.1| pumilio 15 [Arabidopsis thaliana]
gi|75100238|sp|O81465.1|PUM15_ARATH RecName: Full=Pumilio homolog 15; Short=APUM-15; Short=AtPUM15
gi|3377818|gb|AAC28191.1| contains similarity to drosophila pumilio protein (GB:S22026)
[Arabidopsis thaliana]
gi|7267498|emb|CAB77981.1| putative self-incompatability RNA-binding protein [Arabidopsis
thaliana]
gi|332657258|gb|AEE82658.1| pumilio 15 [Arabidopsis thaliana]
Length = 477
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 20/287 (6%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S LQ ++ G +DK+F + ELM YG VF K +E C + Q+ + L I
Sbjct: 165 SHMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRV-LDIV 223
Query: 64 FQDQL-FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP--GSSVI 120
++ F+ V G+ +++ L++ + S + M L + L++TK VI
Sbjct: 224 LEEPFEFVRLCVHTHGTHAIQGLMRSLC-SEEQISRFMETL--CYVSLLLTKDVIAHRVI 280
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
L C ++ + +++C +A + GC L I R ++ I A
Sbjct: 281 LFCFNQFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAV 340
Query: 181 SLSRHRSG----------NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
L + G NYVVQ++L L+D + A+ L G+YV LS K GS VVQK
Sbjct: 341 RLCGNCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQK 400
Query: 231 FLKYQN-AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR 276
L+ + + I+ ELL+ L V D YG+YVIQTA + + +D+
Sbjct: 401 CLESREFSSRRIIAELLSDIDSLLV--DPYGDYVIQTAWIVSEVRDK 445
>gi|407406573|gb|EKF30846.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi
marinkellei]
Length = 565
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S+GD + + + ELM+ QY F+ K + + +
Sbjct: 207 QHGCRFLQRLLGGSNGDGEFVRIIMNEIVPHVAELMTDQYANFLIQKLFDMMPQD-VRYK 265
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ + + ++ G+ SV+K+++ +A + + AL + L+ G+
Sbjct: 266 VARVAAPKIISI--ALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLVKDAHGNH 322
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K L+ + +FIY A C+ +A ++QGC L ++ S+R +++ I
Sbjct: 323 VIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASSSQRATLVNQILRC 382
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQN 236
++ GNYV+Q+VL D D I A H V L + K S V++K L+ Q
Sbjct: 383 CLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGASQP 442
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
VE + + D + ++ D +GNYV+QTAL
Sbjct: 443 VQEMYVETMCSPDVVSRLIQDDFGNYVLQTALT 475
>gi|427782705|gb|JAA56804.1| Putative pumilio log 1 [Rhipicephalus pulchellus]
Length = 1138
Score = 87.0 bits (214), Expect = 1e-14, Method: Composition-based stats.
Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 18/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + G + LM+ +G +V KF E + Q + L
Sbjct: 808 QHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEFGSAEQKQALAL 867
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ L ++ +G ++K ++ + SP V+ L + + G+ V+
Sbjct: 868 KVKGH---VLPLALQMYGCRVIQKALESI--SPDQQKEVVKELDGHVLKCVKDQNGNHVV 922
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ G + +L + +
Sbjct: 923 QKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPVLEELHQHTE 982
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYVVQHVL P I A+RG + LS K S VV+K + + +
Sbjct: 983 QLVQDQYGNYVVQHVLEHGRPEDKGRIVAAVRGRVLPLSQHKFASNVVEKCVTHASRSER 1042
Query: 240 -YIVEELLN-----SDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
++EE+ + + D+Y NYV+Q + V Q +L +H K++ H+
Sbjct: 1043 ALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEPPQRKLLLH-----KIRPHVP 1097
Query: 293 ALRVMKYGSN 302
+LR YG +
Sbjct: 1098 SLRKYTYGKH 1107
>gi|49387789|dbj|BAD26354.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
gi|49389128|dbj|BAD26407.1| pumilio/Puf RNA-binding domain-containing protein-like [Oryza
sativa Japonica Group]
Length = 498
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI C++ + A +E+C+ +ACH G + L N + ++ + +I + +N
Sbjct: 304 VIQACIQCFPADIAKVLVDAVVENCIEIACHLNGLLFLQNCLGHITLEEKYKIFTQVCIN 363
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-YQNA 237
+ L++HRSGNY+VQ VL PF ++ I + HYVDL+ K S VV+K LK + +
Sbjct: 364 SVYLAKHRSGNYIVQDVLEFGHPFHLEIITSCFKTHYVDLARQKYSSRVVEKCLKVFGDL 423
Query: 238 VHYIV--EELLNSDQILQVASDKYGNYVIQTALV 269
Y++ E +L+ D + +D+ NYVI TAL+
Sbjct: 424 EQYLIVCELVLDLDHFRDLVTDEVANYVISTALL 457
>gi|35186940|gb|AAQ84132.1| pumilio protein 3 [Trypanosoma cruzi]
Length = 561
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 8/273 (2%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S+GD + + V ELM+ QY F+ K + + +
Sbjct: 207 QHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMTDQYANFLIQKLFDMMPQD-VRYK 265
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ + + ++ G+ SV+K+++ +A + + AL + L+ G+
Sbjct: 266 VARVAAPKIISI--ALTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLVKDAHGNH 322
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K L+ + +FIY A C+ +A ++QGC L ++ S+R +++ I
Sbjct: 323 VIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRC 382
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQN 236
++ GNYV+Q+VL D D I A H V L + K S V++K L+ Q
Sbjct: 383 CLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLRGASQP 442
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
VE + + D + ++ D +GNYV+QTAL
Sbjct: 443 VQEMYVETMCSPDVVSRLIQDDFGNYVLQTALT 475
>gi|158828285|gb|ABW81161.1| unknown [Capsella rubella]
Length = 991
Score = 86.7 bits (213), Expect = 1e-14, Method: Composition-based stats.
Identities = 82/316 (25%), Positives = 143/316 (45%), Gaps = 34/316 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q +
Sbjct: 636 GSRFIQQKLETATTDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLPPQ------RR 689
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMT 113
D+LF L S+ +G ++K I+VV L HVM ++
Sbjct: 690 ELGDKLFENVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR--------D 741
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQIL 172
+ G+ V+ KC+E +FI H + L+ H GC + +++ + +++
Sbjct: 742 QNGNHVVQKCIECVPEENIEFIISTFFGHVVSLSTHPYGCRVIQRVLEHCHDPDTQSKVM 801
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I + L++ + GNYVVQHVL P I L G V +S K S VV+K L
Sbjct: 802 EEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCL 861
Query: 233 KY--QNAVHYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ +V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+
Sbjct: 862 TFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTR 917
Query: 287 LQQHLAALRVMKYGSN 302
++ HL AL+ YG +
Sbjct: 918 IKVHLNALKKYTYGKH 933
>gi|154337334|ref|XP_001564900.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061938|emb|CAM38979.1| putative pumillio protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 573
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 7/272 (2%)
Query: 1 EEGSQYLQEKLSSG-DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G +YLQ L + D ++ + V ELM+ QY F+ K + +
Sbjct: 210 QHGCRYLQRWLDTNCDPEVVQVIMDEVIPHVGELMTDQYANFLIQKLFDIMPDD--VRYK 267
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ I Q+ ++A + G+ SV+K+I+ ++ + + AL + L+ G+ V
Sbjct: 268 VAIVAAPQICMIA-LTPHGTFSVQKMIETISTRAEMEI-ICEALAKDVVRLVKDAHGNHV 325
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I K L+ ++IY+A C+ +A ++QGC L ++ ++ ++ +
Sbjct: 326 IQKVLQRFDFDDKEYIYRAVATDCVSIAKNKQGCCVLQRCLEYASPQQKAALVDQVLACC 385
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+ + GNYV+Q+VL D + D I + H V LS+ K S V++K L+ +
Sbjct: 386 LQIVQDPFGNYVLQYVLEAHDSKINDTIALSFLPHLVQLSMNKFSSNVMEKVLRGASKPV 445
Query: 240 YI--VEELLNSDQILQVASDKYGNYVIQTALV 269
+ VEE+ N + I ++ D +GNYV+QTAL
Sbjct: 446 QVLYVEEMCNPEIISRLIQDDFGNYVLQTALT 477
>gi|357130137|ref|XP_003566709.1| PREDICTED: pumilio homolog 1-like [Brachypodium distachyon]
Length = 857
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+
Sbjct: 535 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIK------ 588
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV AQ ++ + + R + + G+
Sbjct: 589 ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVAELDGHIMRCVR----DQNGN 644
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E FI + L+ H GC + +++ +QI+ I
Sbjct: 645 HVIQKCIECIPQDVIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 704
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 705 QSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQVVQMSQQKFASNVIEKCLAFGN 764
Query: 237 AV--HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L S + L+V D++ NYV+Q L Q R + ++T+++ H
Sbjct: 765 PVERQILIGEMLGSTTESEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKAH 820
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 821 LNTLKKYTYG 830
>gi|293331587|ref|NP_001169459.1| uncharacterized protein LOC100383330 [Zea mays]
gi|224029501|gb|ACN33826.1| unknown [Zea mays]
Length = 453
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 23/307 (7%)
Query: 3 GSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL +S D R +K+F + L + +G +V KF E E QL
Sbjct: 121 GSRFIQQKLEIASLDDR--EKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL----- 173
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
I DQL L S+ +G V+K+++VV + + ++ L+ + + G+
Sbjct: 174 -IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIGDQNGN 230
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLIS 176
VI KC+E + F+ L L L H+ GC + +++ + ++ I
Sbjct: 231 HVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIV 290
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ + GNYVVQHVL P AI L G V LS K S V++K L++
Sbjct: 291 QQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGT 350
Query: 237 --AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ E+++S Q Q + D++GNYV+Q L +T + L + +++ ++ HL
Sbjct: 351 LEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKLHLNE 406
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 407 LKNYTYG 413
>gi|242072408|ref|XP_002446140.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
gi|241937323|gb|EES10468.1| hypothetical protein SORBIDRAFT_06g002250 [Sorghum bicolor]
Length = 761
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 141/302 (46%), Gaps = 13/302 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL + K+
Sbjct: 430 GSRFIQQKLEIASLDVREKIFPEILSNAIALTTDVFGNYVIQKFFEFATESQLIQLADKL 489
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L S+ +G V+K+++VV + ++ LK + + G+ VI K
Sbjct: 490 KGH---ILELSLQMYGCRVVQKVLEVVDMDRKI--DIVHELKNYVLKCIGDQNGNHVIQK 544
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLISVNAAS 181
C+E + F+ L L L H+ GC + +++ + I++ I
Sbjct: 545 CIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSAIMNEIVQQTFH 604
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L+ + GNYVVQHVL P +I L G V LS K S V++K L +
Sbjct: 605 LTDDKFGNYVVQHVLEHGKPEERSSIIQKLSGQVVILSKQKFASNVIEKCLAFGTPEERD 664
Query: 241 -IVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
++ E+++S Q Q + D++GNYV+Q L +T L + +++ ++ HL L+
Sbjct: 665 SLIGEIISSGQTFQELMKDQFGNYVVQRVL-QTCDDKYLEM---ILSSIKLHLNELKNYT 720
Query: 299 YG 300
YG
Sbjct: 721 YG 722
>gi|20513851|gb|AAM22812.1|AF427791_3 BPM [Hordeum vulgare subsp. vulgare]
Length = 911
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+
Sbjct: 589 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTTQIK------ 642
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV AQ ++ + + R + + G+
Sbjct: 643 ELSDQLIGRVLALSLQMYGCRVIQKAIEVVDLAQQTKMVGELDGHIMRCVR----DQNGN 698
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E FI + L+ H GC + +++ +QI+ I
Sbjct: 699 HVIQKCIECIPQDIIQFIVSTFYGQVVLLSTHPYGCRVIQRVLEHCDDPTTQQIMMDEIL 758
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P AI L G V +S K S V++K L + N
Sbjct: 759 QSVCLLAQDQYGNYVVQHVLEHGKPHERTAIIDKLIGQIVQMSQQKFASNVIEKCLAFGN 818
Query: 237 AVHY------IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++E S+ + + D++ NYV+Q L Q R + ++T+++ H
Sbjct: 819 PVERQILIGEMLESTTESEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKAH 874
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 875 LNTLKKYTYG 884
>gi|367002536|ref|XP_003686002.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
gi|357524302|emb|CCE63568.1| hypothetical protein TPHA_0F00820 [Tetrapisispora phaffii CBS 4417]
Length = 794
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%), Gaps = 19/279 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L + + +F + ELM+ +G ++ K +E Q LII+
Sbjct: 482 QHGCRFLQKQLDLVGEQAANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLEQ-RLIII 540
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I+ F+ +++ G+ +++KL++ + ++ +LK L G+ V+
Sbjct: 541 NISAP--YFIDIALNPHGTRALQKLVECIKTDEEAKI-IVDSLKPSIVELSKDLNGNHVV 597
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K L+ FI++AA ++C+ +A H GC L +D+ ++ + + + +N
Sbjct: 598 QKILQQFKPEFIQFIFEAACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQLLINID 657
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV--------DLSLTKCGSFVVQKFL 232
LS + GNYV+Q+V+ E ++ + Y+ DLSL K GS VV+K L
Sbjct: 658 RLSFNPFGNYVIQYVITKE----VETGNYNYSYKYINILKHKIKDLSLHKFGSNVVEKLL 713
Query: 233 KYQNAVHYIVEELL---NSDQILQVASDKYGNYVIQTAL 268
+ I+ ELL ++I + +D YGNYV+QTAL
Sbjct: 714 RTPVLSETIILELLKKGGKNEIEILLNDSYGNYVLQTAL 752
Score = 40.8 bits (94), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 16/274 (5%)
Query: 34 MSGQYGRFVFGKFIESC--NESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
M QYG +V K+ +S N++ L I I + L D+ G ++K + +V +
Sbjct: 445 MKNQYGGYVQRKYDDSLIYNDATLDQFIGSI------YSLCK-DQHGCRFLQKQLDLVGE 497
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
+ +K LM G+ +I K LE + I + + + +A +
Sbjct: 498 Q--AANTIFEEIKNHCIELMTDSFGNYLIQKLLERITLEQRLIIINISAPYFIDIALNPH 555
Query: 152 GCINLNNFIDNMKGSRR-KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
G L ++ +K K I+ + + LS+ +GN+VVQ +L P I I A
Sbjct: 556 GTRALQKLVECIKTDEEAKIIVDSLKPSIVELSKDLNGNHVVQKILQQFKPEFIQFIFEA 615
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTAL 268
+ ++++ + G V+Q+ L + E+LL I +++ + +GNYVIQ +
Sbjct: 616 ACQNCIEIATHRHGCCVLQRCLDSGTTTQCESLCEQLL--INIDRLSFNPFGNYVIQYVI 673
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ + + + + L+ + L + K+GSN
Sbjct: 674 TKEVETGNYNYSYKYINILKHKIKDLSLHKFGSN 707
>gi|297746040|emb|CBI16096.3| unnamed protein product [Vitis vinifera]
Length = 360
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 144/307 (46%), Gaps = 16/307 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 39 GSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKL 98
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L S+ +G ++K I+VV P ++ L + + G+ VI K
Sbjct: 99 YGH---VLTLSLQMYGCRVIQKAIEVV--DPDQKIKMVEELDGHIMRCVRDQNGNHVIQK 153
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAAS 181
C+E FI + + L+ H GC + +++ + + + +++ I + +
Sbjct: 154 CIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSM 213
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--H 239
L++ + GNYVVQHVL P AI L G V +S K S VV+K L +
Sbjct: 214 LAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQ 273
Query: 240 YIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL AL+
Sbjct: 274 ILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLNALK 329
Query: 296 VMKYGSN 302
YG +
Sbjct: 330 KYTYGKH 336
>gi|224100489|ref|XP_002311896.1| predicted protein [Populus trichocarpa]
gi|222851716|gb|EEE89263.1| predicted protein [Populus trichocarpa]
Length = 339
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 146/309 (47%), Gaps = 20/309 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F V +LM+ +G +V KF E + Q + K+
Sbjct: 24 GSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRMELAEKL 83
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q L S+ +G ++K ++V+ Q L + + R + + G+ VI
Sbjct: 84 SGQ---ILQLSLQMYGCRVIQKALEVIELDQKAKLAQELDGHVMRC----VHDQNGNHVI 136
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNA 179
KC+E +FI A + L+ H GC + +++ + Q I+ I ++
Sbjct: 137 QKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCIVDEILESS 196
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-- 237
L++ + GNYV QHVL P I L G V +S K S VV+K LK+ +A
Sbjct: 197 YLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKCLKHADAAE 256
Query: 238 ----VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+ I+ + +D +L + D++ NYV+Q L ET + + L++++ HL A
Sbjct: 257 RELMIGEIIGQSEENDNLLIMMKDQFANYVVQKIL-ETSNDKQKEI---LLSRINAHLNA 312
Query: 294 LRVMKYGSN 302
L+ YG +
Sbjct: 313 LKKYTYGKH 321
>gi|296086206|emb|CBI31647.3| unnamed protein product [Vitis vinifera]
Length = 874
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E SQ+ + ++
Sbjct: 553 GSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQL 612
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K I+VV Q ++ + + R + + G+ VI
Sbjct: 613 TGH---VLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVR----DQNGNHVI 665
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
KC+E FI + + L+ H GC + +++ + ++I+ I +
Sbjct: 666 QKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRIMMDEILQSV 725
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNA 237
L++ + GNYVVQHVL P +I L G V +S K S VV+K L + +
Sbjct: 726 RMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEKCLTFGAPSE 785
Query: 238 VHYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L S ++ LQ + D++ NYV+Q L ET +L + ++ +++ HL A
Sbjct: 786 RQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNA 841
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 842 LKKYTYG 848
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + + H I A SL GNYV+Q
Sbjct: 543 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 602
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGN 261
I + L GH + LSL G V+QK ++ + + +++ D+ GN
Sbjct: 603 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVRDQNGN 662
Query: 262 YVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+VIQ +E + QD + Q +++ + L YG
Sbjct: 663 HVIQKC-IECIPQDSI---QFIISTFYDQVVTLSTHPYG 697
>gi|225448992|ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product [Vitis vinifera]
Length = 1026
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSG--DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL + D +I K+F + + LM+ +G +V KF E ESQ +
Sbjct: 705 GSRFIQQKLETATVDEKI--KIFPEIIPHSHTLMTDVFGNYVIQKFFEHGTESQRQALAS 762
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T L S+ +G ++K ++VV +++ L + + G+ VI
Sbjct: 763 ELTGH---ILPLSLQMYGCRVIQKALEVVDVD--RQTQMVAELDGSVMKCVRDQNGNHVI 817
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNA 179
KC+E + FI + + L+ H GC + +++ S +QI + I +
Sbjct: 818 QKCIECVPQDRIQFIISSFYGQVVSLSTHPYGCRVIQRVLEHCDDSSTQQIIMDEIMQSV 877
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L+ + GNYV+QHVL P AI L G V +S K S VV+K L +
Sbjct: 878 CILAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQKFASNVVEKCLTFGGPEE 937
Query: 240 Y--IVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L S ++ LQ+ D +GNYV+Q + Q R + ++++++ HL
Sbjct: 938 RQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQKVIETCDDQTR----ELILSRIKVHLNT 993
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 994 LKRYTYG 1000
>gi|356533951|ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 983
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + K+F + LM+ +G +V KF E ESQ + ++
Sbjct: 666 GSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTESQRKELANQL 725
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q ++ + A+ + + + G+ VI
Sbjct: 726 TGH---VLPLSLQMYGCRVIQKALEVVDVDQQGQMVSELNGAIMKCVR----DQNGNHVI 778
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNA 179
KC+E K FI + + L+ H GC + +++ +QI + I +
Sbjct: 779 QKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEIMQSV 838
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
++L++ + GNYV+QH++ P I L G V +S K S V++K L + +
Sbjct: 839 STLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNVIEKCLAFGSPEE 898
Query: 239 -HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L + ++ LQ + D +GNYV+Q L ET L + ++++++ HL A
Sbjct: 899 RQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIKVHLNA 954
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 955 LKRYTYG 961
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
++H + + + G + ++ + +I I +A +L GNYV+Q
Sbjct: 654 IDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHG 713
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVASD 257
+ L GH + LSL G V+QK L+ + +V EL + I++ D
Sbjct: 714 TESQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQGQMVSEL--NGAIMKCVRD 771
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+VIQ +E + QD++ Q +V+ + AL YG
Sbjct: 772 QNGNHVIQKC-IECVPQDKI---QFIVSSFYGQVVALSTHPYG 810
>gi|297822641|ref|XP_002879203.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
gi|297325042|gb|EFH55462.1| mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 973
Score = 85.9 bits (211), Expect = 2e-14, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 28/313 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 649 GSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELGEKL 708
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMTKPG 116
D + L S+ +G ++K I+VV L HVM ++ + G
Sbjct: 709 I--DNVLPL-SLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR--------DQNG 757
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 175
+ V+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 758 NHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEI 817
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 818 LITVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 877
Query: 235 -QNAVHYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++
Sbjct: 878 GPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKV 933
Query: 290 HLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 934 HLNALKKYTYGKH 946
>gi|50302921|ref|XP_451398.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640529|emb|CAH02986.1| KLLA0A09097p [Kluyveromyces lactis]
Length = 805
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L + ++ + ELM+ +G ++ K E N+ I+
Sbjct: 491 QHGCRFLQRQLDENGEEVASTIYSEIKDHICELMNDPFGNYLMQKLFERINQRDRVEIVK 550
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK-----------VVAQSPPLLYHVMSALKRLFKF 109
+ Q F+ ++D G+ +++KL++ V + P +L +L R FK
Sbjct: 551 NCSPQ---FMDIALDAHGTRALQKLVECTDTEEETQILVASLQPSIL-----SLSRDFK- 601
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
+ V+ K LE N FIY AA + + ++ H GC + +D +
Sbjct: 602 ------SNHVVQKMLENFSNKDTQFIYDAACDDIIKISNHRNGCCVVQRCLDFGNTEQLD 655
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLE-DPFLID-----AICFALRGHYVDLSLTKC 223
+ I + L+ + GNYV+Q++L E D D I L+ + +DLSL K
Sbjct: 656 ALCGKIVEKSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLKFNAIDLSLNKF 715
Query: 224 GSFVVQKFLKYQNAVHYIVEELLNSDQ---ILQVASDKYGNYVIQTAL 268
GS VV+ L+ ++ ++LNS+ +L++ D YGNYV+QTAL
Sbjct: 716 GSNVVESILRTPAVSDVMITKILNSNDESGLLKLLHDSYGNYVLQTAL 763
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 181 SLSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
SLSR N+VVQ +L N + F+ DA C + + +S + G VVQ+ L + N
Sbjct: 595 SLSRDFKSNHVVQKMLENFSNKDTQFIYDAACDDI----IKISNHRNGCCVVQRCLDFGN 650
Query: 237 AVHY------IVEELLNSDQILQVASDKYGNYVIQTALVETMRQ--DRLSVHQRLVTKLQ 288
IVE + ++ + YGNYVIQ L + Q +++V L+
Sbjct: 651 TEQLDALCGKIVE------KSFELTMNPYGNYVIQYILTKEKDQATPDFKYTKKIVDVLK 704
Query: 289 QHLAALRVMKYGSN 302
+ L + K+GSN
Sbjct: 705 FNAIDLSLNKFGSN 718
>gi|357445829|ref|XP_003593192.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482240|gb|AES63443.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 198
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
FI+ AA HC+ +A H+ GC L I G R++++ IS NA L++ + GNYVVQ
Sbjct: 23 FIFVAAARHCIDIATHQHGCCVLPKCIRYSSGEHRQRLVAEISANALLLAQDKYGNYVVQ 82
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQI 251
+VL+ P + G+YV +S+ K S VV+K L N + I+ ELL+
Sbjct: 83 YVLDFRIPSAATTLTRQFEGNYVHMSMQKFSSRVVEKCLVVFNDENRAKIIHELLSDPHF 142
Query: 252 LQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ D + NYVIQ AL R V+ LV K++ + A R Y
Sbjct: 143 DLLLQDPHANYVIQKAL----RHSEGHVYNLLVEKIESYKAICRNSPYS 187
>gi|297845132|ref|XP_002890447.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
gi|297336289|gb|EFH66706.1| hypothetical protein ARALYDRAFT_335400 [Arabidopsis lyrata subsp.
lyrata]
Length = 343
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 110/204 (53%), Gaps = 3/204 (1%)
Query: 105 RLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 164
R F ++ K S V + + K + IY+ L + LY+A + GC+ LN+ I +
Sbjct: 131 RRFLHIITDKYASYVARRGIAVFNKKKKEAIYERILHYALYIARDKHGCLALNDIITDAD 190
Query: 165 G-SRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKC 223
+ ++ +I+ A LS GN+V+Q VL L D + I +LRGH+VDLS+ +
Sbjct: 191 DLYYKNKLFDVIAHKAILLSNDAYGNFVIQQVLKLNDLRCKNNIVASLRGHFVDLSIQRY 250
Query: 224 GSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQ-DRLSVHQR 282
GS++V L+ + ++ +VEELL D ++++ + YGN+V+ AL T ++ R ++
Sbjct: 251 GSYIVNLLLETEESMVVVVEELLEGDMLMRLTRNVYGNFVVCKALRVTQKEMVRTDLYWG 310
Query: 283 LVTKLQQHLAALRVMKYGSNKEIQ 306
LV KL+ LR + GSN Q
Sbjct: 311 LVHKLKPFHNPLRRSR-GSNSWTQ 333
>gi|300175939|emb|CBK21935.2| unnamed protein product [Blastocystis hominis]
Length = 544
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 6/266 (2%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+ L + + ++F + ELM+ +G +VF ++ C+E + A I+ +
Sbjct: 233 GCRALQQILLTASPAAVTEIFEELQSSLRELMTDPFGNYVFQMLLQVCSEERRAQILSAV 292
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ AS++ G+ V+ L++ + SP ++ + +AL+ L G+ VIL+
Sbjct: 293 R---DFVIDASLNIHGTRCVQSLVQYCS-SPSMIDSLFAALQGHIAHLAAHPNGNHVILR 348
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
CL+ +++ ++HC+ +A H GC + F R ++++ I A L
Sbjct: 349 CLQSIPESFCTPLFEELVQHCIDIATHRHGCCVIQQFFLRAPPLYRNRLMNAILHEAHLL 408
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNAVHY 240
+ GNYVVQ VL P + + ++ GH V+ S K S V++K L + +
Sbjct: 409 ITNPFGNYVVQFVLERGRPEERELLTRSVFGHVVEYSCQKYSSNVIEKVIVLADEQVRYQ 468
Query: 241 IVEELLNSDQILQVASDKYGNYVIQT 266
I+ E++ S + + NY+IQ
Sbjct: 469 IICEIVGSPHFPAILHHNFANYIIQN 494
>gi|296417426|ref|XP_002838359.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634287|emb|CAZ82550.1| unnamed protein product [Tuber melanosporum]
Length = 999
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 75/309 (24%), Positives = 141/309 (45%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S + +F + + +LM+ +G +V KF E N+ Q +++
Sbjct: 628 QHGSRFIQQKLETANSDEKETIFAEIKSNSLQLMTDVFGNYVIQKFFEHGNQLQKSILAK 687
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ + Q L+ + ++ + K + G+
Sbjct: 688 QM---EGHVLALSLQMYGCRVVQKALEHILTEQQASLVKELDGSVLKCVK----DQNGNH 740
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI +A LA H GC + +++ + + +L + V
Sbjct: 741 VVQKAIERVPAEHIQFIIKAFRGQVHTLATHPYGCRVIQRMLEHCDETAQASLLQELHVC 800
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---- 234
+L + + GNYV QHV+ P I + + S K S VV+K + +
Sbjct: 801 TIALVQDQYGNYVTQHVIEHGKPEDRAKIISLVTTQLLQFSKHKFASNVVEKSITFGSEE 860
Query: 235 --QNAVHYIVEELLNSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ V + + + LQ+ D+YGNYVIQ L DR + LV +++ L
Sbjct: 861 EKREIVKVVTTPRSDGNSPLQILMRDQYGNYVIQKLLTLLQGPDR----ETLVEQIKPQL 916
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 917 QALKKFTYG 925
Score = 44.3 bits (103), Expect = 0.069, Method: Composition-based stats.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 8/155 (5%)
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
SV+L+ + + + H + + + G + ++ ++ I I
Sbjct: 596 SVLLEEFRANSKSNKRYELKDIFHHVVEFSGDQHGSRFIQQKLETANSDEKETIFAEIKS 655
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--- 234
N+ L GNYV+Q + + + GH + LSL G VVQK L++
Sbjct: 656 NSLQLMTDVFGNYVIQKFFEHGNQLQKSILAKQMEGHVLALSLQMYGCRVVQKALEHILT 715
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
Q A +V+EL S +L+ D+ GN+V+Q A+
Sbjct: 716 EQQAS--LVKELDGS--VLKCVKDQNGNHVVQKAI 746
>gi|66815363|ref|XP_641698.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
gi|60469729|gb|EAL67717.1| hypothetical protein DDB_G0279557 [Dictyostelium discoideum AX4]
Length = 782
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 141/274 (51%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKLSS-GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G ++LQ+KL DS + +F V ELM YG+++ + ++ C+ +Q I+
Sbjct: 482 QAGCRFLQKKLEEKPDSEHVTLIFNEVFDHLNELMIDPYGQYLIPQLMKYCDNNQRRQIV 541
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
KI + F + +G ++KL++ + SP + +++++K L G+ +
Sbjct: 542 DKIAPSVETF---ACHVYGIHGIQKLLQYL--SPDQVESIIASIKGKVIQLSKDNKGNYL 596
Query: 120 I---LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
I LK P N F+ A + + + H+ GC +N IDN + ++++ I+
Sbjct: 597 IQSFLKQFSPEVNQ---FVCDAIMGNIEEICTHKVGCTVVNRCIDNANPEQLEKLVDKIT 653
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
++ L + + GNYVVQH+L+ + + +L+ + +LS+ K S V++K L+ +
Sbjct: 654 EHSLKLVQDQFGNYVVQHLLSKNKAYS-SKLIVSLKDNIAELSIQKFSSNVIEKCLQLAD 712
Query: 237 AVHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
Y I++ L +D IL + DKY N+VIQTAL
Sbjct: 713 TPTYELIIKALTEAD-ILSLLQDKYANFVIQTAL 745
>gi|256090645|ref|XP_002581294.1| pumilio [Schistosoma mansoni]
gi|353230661|emb|CCD77078.1| putative pumilio [Schistosoma mansoni]
Length = 1537
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 26/312 (8%)
Query: 3 GSQYLQEKLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL + ++DK +F + + LM +G +V KF E Q ++
Sbjct: 981 GSRFIQQKLEQ--ASVVDKTSVFREILPHAYNLMIDVFGNYVIQKFFELGTPEQKQILAQ 1038
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
+I Q L S+ +G ++K + +S PL + S +K L ++ + G+
Sbjct: 1039 RIRGQ---VLSLSLQMYGCRVIQKAV----ESVPLEMQI-SIVKELDGCVIKCVKDQNGN 1090
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KC+E FI A +H ++ H GC + +++ + IL +
Sbjct: 1091 HVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQTTPILSELHQ 1150
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF------ 231
+ +L + + GNYV+QHVL I ++G LS+ K S VV+K
Sbjct: 1151 HTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVVEKAVANASR 1210
Query: 232 LKYQNAVHYIVEELLNSDQIL-QVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ Q+ ++ I+EE + +L + D++ NYVIQ L + Q + + L+ +++ H
Sbjct: 1211 VERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKML-DVAEQ---PIRKELMIQIRPH 1266
Query: 291 LAALRVMKYGSN 302
L LR YG +
Sbjct: 1267 LGILRKYTYGKH 1278
>gi|256090643|ref|XP_002581293.1| pumilio [Schistosoma mansoni]
gi|353230662|emb|CCD77079.1| putative pumilio [Schistosoma mansoni]
Length = 1534
Score = 85.5 bits (210), Expect = 3e-14, Method: Composition-based stats.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 26/312 (8%)
Query: 3 GSQYLQEKLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL + ++DK +F + + LM +G +V KF E Q ++
Sbjct: 978 GSRFIQQKLEQ--ASVVDKTSVFREILPHAYNLMIDVFGNYVIQKFFELGTPEQKQILAQ 1035
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
+I Q L S+ +G ++K + +S PL + S +K L ++ + G+
Sbjct: 1036 RIRGQ---VLSLSLQMYGCRVIQKAV----ESVPLEMQI-SIVKELDGCVIKCVKDQNGN 1087
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ KC+E FI A +H ++ H GC + +++ + IL +
Sbjct: 1088 HVVQKCVENVPPEHLQFIVDAFKDHVYSISTHSYGCRVIQRILEHCTPEQTTPILSELHQ 1147
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF------ 231
+ +L + + GNYV+QHVL I ++G LS+ K S VV+K
Sbjct: 1148 HTDALVKDQYGNYVIQHVLEHGKTEDKSRIVEHIKGRVAKLSVHKFASNVVEKAVANASR 1207
Query: 232 LKYQNAVHYIVEELLNSDQIL-QVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ Q+ ++ I+EE + +L + D++ NYVIQ L + Q + + L+ +++ H
Sbjct: 1208 VERQSLINEILEETVTRSSVLVMMMKDQFANYVIQKML-DVAEQ---PIRKELMIQIRPH 1263
Query: 291 LAALRVMKYGSN 302
L LR YG +
Sbjct: 1264 LGILRKYTYGKH 1275
>gi|384488095|gb|EIE80275.1| hypothetical protein RO3G_04980 [Rhizopus delemar RA 99-880]
Length = 807
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 144/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +F V +LM+ +G +V KF E N Q+ IL
Sbjct: 500 QHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGN--QMQKTIL 557
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + L S+ +G V+K ++ + Q L+ + + + K + G+
Sbjct: 558 AKQMEGHVLSL-SLQMYGCRVVQKALEHVLTEQQAKLVKELDGCILKCIK----DQNGNH 612
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E FI A LA H GC + ++ ++ + +L +
Sbjct: 613 VIQKAIERVPAQHIQFIINAFHGQVYNLATHPYGCRVIQRMFEHCTENQTEPLLDELHRC 672
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
L + + GNYV+QH+L P + +RGH + LS K S VV+K + + +
Sbjct: 673 TGQLVQDQYGNYVIQHILERGRPVDKTFVIEKIRGHVLQLSKHKFASNVVEKCVDFGSKR 732
Query: 237 AVHYIVEELLN--SDQILQVAS---DKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
++EE+L SD L +A+ D+Y NYVIQ L D + QR LVTK++
Sbjct: 733 DRQLLIEEVLQPRSDGTLPLATMMKDQYANYVIQKML------DVVDDDQRELLVTKIKP 786
Query: 290 HLAALRVMKYG 300
HL L+ YG
Sbjct: 787 HLQFLKKYTYG 797
>gi|254585741|ref|XP_002498438.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
gi|238941332|emb|CAR29505.1| ZYRO0G10274p [Zygosaccharomyces rouxii]
Length = 900
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 11/275 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L D ++ +T ELM+ +G ++ K +E Q + +
Sbjct: 588 QHGCRFLQMQLDVLGPEAADAIYDETRDYTVELMTDSFGNYLIQKLLEKVTVDQR-IFLA 646
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I F+ + + G+ +++KL++ V+ V+++LK L G+ ++
Sbjct: 647 RIAAPH--FVRIASNPHGTRALQKLVECVSTEEEAQI-VINSLKGSIVELSKDLNGNHIV 703
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ AA +HC +A H GC L +D+ ++ + + +++ +
Sbjct: 704 QKCLQKLQPKDVQFIFDAACQHCTEIATHRHGCCVLQRCLDHGSKAQCQALCNILLKHVD 763
Query: 181 SLSRHRSGNYVVQHVLNLE---DPFLID-AICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+++ E D + + L+ V+LSL K GS V++K ++ +
Sbjct: 764 HLTLDPFGNYVVQYIITKEVEQDSYDYTYKVVHLLKPKVVELSLHKFGSNVIEKIIRTRV 823
Query: 237 AVHYIVEELLNSDQILQVAS---DKYGNYVIQTAL 268
++ E+LN+ V + D YGNYV+QTAL
Sbjct: 824 VSETMIMEILNNRGDTDVPALLNDGYGNYVLQTAL 858
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 13/200 (6%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + F+ + A H + +A + G L ++ +
Sbjct: 620 LMTDSFGNYLIQKLLEKVTVDQRIFLARIAAPHFVRIASNPHGTRALQKLVECVSTEEEA 679
Query: 170 QI-LHLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI ++ + + LS+ +GN++VQ L P F+ DA C H +++ + G
Sbjct: 680 QIVINSLKGSIVELSKDLNGNHIVQKCLQKLQPKDVQFIFDAACQ----HCTEIATHRHG 735
Query: 225 SFVVQKFLKYQNAVHYIVEELLNS--DQILQVASDKYGNYVIQTALVETMRQDRLSVHQR 282
V+Q+ L + + + L N + + D +GNYV+Q + + + QD +
Sbjct: 736 CCVLQRCLDHGSKAQ--CQALCNILLKHVDHLTLDPFGNYVVQYIITKEVEQDSYDYTYK 793
Query: 283 LVTKLQQHLAALRVMKYGSN 302
+V L+ + L + K+GSN
Sbjct: 794 VVHLLKPKVVELSLHKFGSN 813
>gi|356574619|ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
Length = 1000
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + K+F + LM+ +G +V KF E +SQ + ++
Sbjct: 665 GSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTDSQRKELASQL 724
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q L+ + A+ + + + G+ VI
Sbjct: 725 TGH---VLPLSLQMYGCRVIQKALEVVDADQQGQLVSELNGAIMKCVR----DQNGNHVI 777
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNA 179
KC+E K FI + + L+ H GC + +++ +QI + I +
Sbjct: 778 QKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLNTQQIIMDEIMQSV 837
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
+L++ + GNYV+QH++ P AI L G V +S K S V++K L + +
Sbjct: 838 GTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASNVIEKCLAFGSPEE 897
Query: 239 -HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L + ++ LQ + D +GNYV+Q L ET L + ++++++ HL A
Sbjct: 898 RQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIKVHLNA 953
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 954 LKRYTYG 960
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
++H + + + G + ++ + +I I +A +L GNYV+Q
Sbjct: 653 IDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHG 712
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVASD 257
+ L GH + LSL G V+QK L+ +A +V EL + I++ D
Sbjct: 713 TDSQRKELASQLTGHVLPLSLQMYGCRVIQKALEVVDADQQGQLVSEL--NGAIMKCVRD 770
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+VIQ +E + QD++ Q +V+ + L YG
Sbjct: 771 QNGNHVIQKC-IECVPQDKI---QFIVSSFYGQVVLLSTHPYG 809
>gi|15220239|ref|NP_174820.1| protein pumilio 17 [Arabidopsis thaliana]
gi|12322098|gb|AAG51092.1|AC027032_12 RNA-binding protein, putative [Arabidopsis thaliana]
gi|332193710|gb|AEE31831.1| protein pumilio 17 [Arabidopsis thaliana]
Length = 304
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 118/231 (51%), Gaps = 19/231 (8%)
Query: 85 LIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCL 144
++K++ S + A+ RLF +M+ K S V ++ + K + +Y L + L
Sbjct: 72 MLKLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHILRYAL 131
Query: 145 YLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFL 203
+LA + GCI LN I + R +++ ++S NA LS GN+VVQHVL L D
Sbjct: 132 FLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRC 191
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-AVHYIVEELL--NSDQILQVASDKYG 260
I L G+ V+LS K GS++V++ L+ ++ + IV +LL ++ ++++A + G
Sbjct: 192 TGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENG 251
Query: 261 NYV----------IQTA-----LVETMRQDRLSVHQRLVTKLQQHLAALRV 296
N+V I TA LV +R R +H+ +K+ L ++RV
Sbjct: 252 NFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRFPESKIVAILGSMRV 302
>gi|390179097|ref|XP_003736803.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859711|gb|EIM52876.1| GA30209, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1192
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 775 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 834
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 835 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 889
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + N
Sbjct: 890 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHENTE 949
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 950 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1005
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+
Sbjct: 1006 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMT 1061
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1062 ALRKYTYGKHINAKLEK 1078
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 765 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 824
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
P + + ++GH + L+L G V+QK L+ IV EL +L+ D
Sbjct: 825 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 882
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 883 QNGNHVVQKCI 893
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 849 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 906
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 907 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHENTEQLIQ----DQYGNYVI 961
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 962 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1021
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1022 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYGKHINAKLEKY 1079
>gi|390179095|ref|XP_003736802.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|388859710|gb|EIM52875.1| GA30209, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1531
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 78/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 1114 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 1173
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 1174 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 1228
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + N
Sbjct: 1229 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHENTE 1288
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 1289 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1344
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+
Sbjct: 1345 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMT 1400
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1401 ALRKYTYGKHINAKLEK 1417
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 1104 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 1163
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
P + + ++GH + L+L G V+QK L+ IV EL +L+ D
Sbjct: 1164 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 1221
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 1222 QNGNHVVQKCI 1232
Score = 40.0 bits (92), Expect = 1.2, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 1188 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 1245
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 1246 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHENTEQLIQ----DQYGNYVI 1300
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 1301 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1360
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1361 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMTALRKYTYGKHINAKLEKY 1418
>gi|328698840|ref|XP_003240746.1| PREDICTED: pumilio homolog 2-like isoform 3 [Acyrthosiphon pisum]
Length = 1116
Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 35/317 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 787 QHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 846
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
K+ + + LA + +G ++K ++ V L HV+ +K +
Sbjct: 847 KV--RGHVLPLA-LQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVK--------DQ 895
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E H FI A L L+ H GC + +++ + IL
Sbjct: 896 NGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDE 955
Query: 175 ISVNAASLSRHRSGNYVVQHVL---NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ + L + + GNYV+QHVL ED + IC ++RG + LS K S VV+K
Sbjct: 956 MHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQHKFASNVVEKC 1012
Query: 232 LKY--QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ + ++ ++EE+ N + + + D+Y NYV+Q L D QR L+
Sbjct: 1013 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 1066
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H A+LR YG +
Sbjct: 1067 KIRPHFASLRKYTYGKH 1083
Score = 68.2 bits (165), Expect = 4e-09, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 10/232 (4%)
Query: 73 SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKN 132
S D+ GS +++ K+ S P V S + LM G+ VI K E +
Sbjct: 784 SQDQHGSRFIQQ--KLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQK 841
Query: 133 DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVV 192
+ Q H L LA GC + ++++ G ++ +I+ + + + ++GN+VV
Sbjct: 842 STLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVKDQNGNHVV 901
Query: 193 QHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQ 250
Q + DP + I A +G + LS G V+Q+ L++ + I++E+
Sbjct: 902 QKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDEM--HQH 959
Query: 251 ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ Q+ D+YGNYVIQ L ++D+ +L+ ++ + L K+ SN
Sbjct: 960 VEQLIQDQYGNYVIQHVLEHGKQEDK----SKLICSVRGKVLTLSQHKFASN 1007
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++ + I A SL GNYV+Q P
Sbjct: 779 HIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 838
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 839 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL--DGHVLKCVKDQN 896
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+V+Q +E + L Q ++ Q + L YG
Sbjct: 897 GNHVVQKC-IECVDPHAL---QFIINAFQGQVLTLSTHPYG 933
>gi|15227052|ref|NP_180483.1| pumilio 1 [Arabidopsis thaliana]
gi|75217076|sp|Q9ZW07.1|PUM1_ARATH RecName: Full=Pumilio homolog 1; Short=APUM-1; Short=AtPUM1
gi|3980412|gb|AAC95215.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253128|gb|AEC08222.1| pumilio 1 [Arabidopsis thaliana]
Length = 968
Score = 84.7 bits (208), Expect = 4e-14, Method: Composition-based stats.
Identities = 81/316 (25%), Positives = 143/316 (45%), Gaps = 34/316 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q +
Sbjct: 644 GSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLPPQ------RR 697
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMT 113
++LF L S+ +G ++K I+VV L HVM ++
Sbjct: 698 ELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR--------D 749
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQIL 172
+ G+ V+ KC+E +FI H + L+ H GC + +++ + +++
Sbjct: 750 QNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVM 809
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I + L++ + GNYVVQHVL P I L G V +S K S VV+K L
Sbjct: 810 EEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCL 869
Query: 233 KY--QNAVHYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ +V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+
Sbjct: 870 TFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTR 925
Query: 287 LQQHLAALRVMKYGSN 302
++ HL AL+ YG +
Sbjct: 926 IKVHLTALKKYTYGKH 941
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 13/234 (5%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHK 131
S D++GS ++ KL ++Y + + LM G+ VI K E +
Sbjct: 639 SSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALV---LMTDVFGNYVIQKFFEHGLPPQ 695
Query: 132 NDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYV 191
+ + +H L L+ GC + I+ + ++ +++ + + R ++GN+V
Sbjct: 696 RRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVRDQNGNHV 755
Query: 192 VQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNS 248
VQ + I+ I GH V LS G V+Q+ L++ + ++EE+L++
Sbjct: 756 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILST 815
Query: 249 DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+L A D+YGNYV+Q L +R + + L K+ Q + K+ SN
Sbjct: 816 VSML--AQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQ----MSQQKFASN 863
>gi|413921572|gb|AFW61504.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 986
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 146/309 (47%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 669 QHGSRFIQQKLENCTAEEKAYVFAEVLPHASSLMTDVFGNYVIQKFFEHGTREQRRDLAT 728
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 729 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVR----DQNGNH 781
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G+ + Q I+ I
Sbjct: 782 VIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEILQ 841
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL + I L G V +S K S V++K ++ +
Sbjct: 842 SACVLAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEKCFQHGDM 901
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IVE+ +D +L + D+Y NYV+Q ++ET +++ + LV++++ H+
Sbjct: 902 AERDLLIRQIVEQTEGNDNLLAMMKDQYANYVVQ-KILETCNENQREL---LVSRVKGHM 957
Query: 292 AALRVMKYG 300
ALR YG
Sbjct: 958 QALRKYTYG 966
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+L H S + +F G+ VI K E + + + H L L+ GC
Sbjct: 694 VLPHASSLMTDVF--------GNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCR 745
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ ++ M+ ++ ++H + + R ++GN+V+Q + I + A +G
Sbjct: 746 VIQKALEVMELDQKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQ 805
Query: 215 YVDLSLTKCGSFVVQKFLKYQNAVHY---IVEELLNSDQILQVASDKYGNYVIQTALVET 271
LS+ G V+Q+ L++ IV+E+L S +L A D+YGNYV Q L
Sbjct: 806 VASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEILQSACVL--AQDQYGNYVTQHVL--- 860
Query: 272 MRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
+R + H+R ++ KL + + K+ SN
Sbjct: 861 ---ERGNAHERSQIIIKLAGQVVTMSQNKFASN 890
>gi|198433949|ref|XP_002130197.1| PREDICTED: similar to pumilio 2 [Ciona intestinalis]
Length = 1043
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 76/307 (24%), Positives = 139/307 (45%), Gaps = 16/307 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q+KL + +F + G ++LM+ +G +V KF E + E +LAL
Sbjct: 702 QHGSRFIQQKLERATPQEKQLVFNEIIGAAYQLMTDVFGNYVIQKFFEFGSLEHKLAL-- 759
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ LA + +G ++K ++ + Q + ++ L + + G+ V
Sbjct: 760 -ANCIHGHVLPLA-LQMYGCRVIQKALECIPQEQQV--EIVKELDGHLLKCVKDQNGNHV 815
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E + FI + L+ H GC + +++ + IL + ++
Sbjct: 816 VQKCIECVPPAQLQFIVDGFKGQVVGLSSHPYGCRVMQRILEHCNEDQTGPILEELHQHS 875
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QN 236
L + + GNYV+QH+L + I LRG + LS K S V++K + + Q
Sbjct: 876 EMLVKDQYGNYVIQHILEHGRTENKNQIINELRGRILTLSQHKFASNVIEKCVSHSSPQT 935
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAALR 295
I E D + + D+Y NYV+Q L V +Q +L +H K++ H+ LR
Sbjct: 936 RAWLIDEVCQEPDALFIMMKDQYANYVVQKMLDVADPQQKKLLIH-----KIRPHILTLR 990
Query: 296 VMKYGSN 302
YG +
Sbjct: 991 KFTYGKH 997
>gi|212526552|ref|XP_002143433.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
gi|210072831|gb|EEA26918.1| mRNA binding protein Pumilio 2, putative [Talaromyces marneffei
ATCC 18224]
Length = 929
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 78/313 (24%), Positives = 145/313 (46%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +S D++F + +LM+ +G +V K E N+SQ ++
Sbjct: 514 QHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 573
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMTK 114
++ L S +G V+K ++ + A L HVM ++ +
Sbjct: 574 QMKSH---ILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQHVMKCVR--------DQ 622
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI K +E H FI A + LA H GC + +++ + + R+ IL
Sbjct: 623 NGNHVIQKAIERVPTHHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETADRESILTE 682
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ V SL + GNYV+QHV+ + + ++ + + S K S VV+K +++
Sbjct: 683 LHVCTESLIPDQFGNYVIQHVIENGEEKDRSVMIKSVVKNIHNFSKHKFASNVVEKSIEF 742
Query: 235 -QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ + + LL + +L + D+YGNYVIQ L + +R + ++ ++
Sbjct: 743 GEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKDSER----EMIIDEI 798
Query: 288 QQHLAALRVMKYG 300
+ L+ L+ YG
Sbjct: 799 KPLLSQLKKFSYG 811
Score = 39.7 bits (91), Expect = 1.7, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ + Q+ I N L GNYVVQ + +
Sbjct: 506 HIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 565
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ ++ H + LS G VVQK L++ Q A +V+EL +++ D
Sbjct: 566 SQKRILANQMKSHILALSTQMYGCRVVQKALEHILTDQQAA--MVKEL--DQHVMKCVRD 621
Query: 258 KYGNYVIQTALVETMRQDRLSVHQ-RL--------VTKLQQHLAALRVMK 298
+ GN+VIQ A+ +R+ H R V KL H RV++
Sbjct: 622 QNGNHVIQKAI------ERVPTHHIRFIIDAFKGNVNKLATHPYGCRVIQ 665
>gi|15227038|ref|NP_180478.1| pumilio 3 [Arabidopsis thaliana]
gi|75217073|sp|Q9ZW02.1|PUM3_ARATH RecName: Full=Pumilio homolog 3; Short=APUM-3; Short=AtPUM3
gi|3980417|gb|AAC95220.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253122|gb|AEC08216.1| pumilio 3 [Arabidopsis thaliana]
Length = 964
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 28/313 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 640 GSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLPPQRRELGEKL 699
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMTKPG 116
D + L S+ +G ++K I+VV L HVM ++ + G
Sbjct: 700 I--DNVLPL-SLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVR--------DQNG 748
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 175
+ V+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 749 NHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEI 808
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 809 LSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 868
Query: 235 -QNAVHYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++
Sbjct: 869 GPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKV 924
Query: 290 HLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 925 HLNALKKYTYGKH 937
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 73 SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKN 132
S D++GS +++ ++ + + K L LM G+ VI K E +
Sbjct: 635 SSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALA--LMTDVFGNYVIQKFFEHGLPPQR 692
Query: 133 DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVV 192
+ + +++ L L+ GC + I+ + ++ Q++ + + R ++GN+VV
Sbjct: 693 RELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVMRCVRDQNGNHVV 752
Query: 193 QHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSD 249
Q + I+ I GH V LS G V+Q+ L++ + ++EE+L++
Sbjct: 753 QKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDTQSKVMEEILSTV 812
Query: 250 QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+L D+YGNYV+Q L +R + + L K+ Q + K+ SN
Sbjct: 813 SML--TQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQ----MSQQKFASN 859
>gi|328698838|ref|XP_003240745.1| PREDICTED: pumilio homolog 2-like isoform 2 [Acyrthosiphon pisum]
Length = 1151
Score = 84.7 bits (208), Expect = 5e-14, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 145/317 (45%), Gaps = 35/317 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 822 QHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 881
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
K+ + + LA + +G ++K ++ V L HV+ +K +
Sbjct: 882 KV--RGHVLPLA-LQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVK--------DQ 930
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E H FI A L L+ H GC + +++ + IL
Sbjct: 931 NGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDE 990
Query: 175 ISVNAASLSRHRSGNYVVQHVL---NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ + L + + GNYV+QHVL ED + IC ++RG + LS K S VV+K
Sbjct: 991 MHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQHKFASNVVEKC 1047
Query: 232 LKY--QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ + ++ ++EE+ N + + + D+Y NYV+Q L D QR L+
Sbjct: 1048 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 1101
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H A+LR YG +
Sbjct: 1102 KIRPHFASLRKYTYGKH 1118
Score = 68.2 bits (165), Expect = 5e-09, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 10/232 (4%)
Query: 73 SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKN 132
S D+ GS +++ K+ S P V S + LM G+ VI K E +
Sbjct: 819 SQDQHGSRFIQQ--KLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQK 876
Query: 133 DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVV 192
+ Q H L LA GC + ++++ G ++ +I+ + + + ++GN+VV
Sbjct: 877 STLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVKDQNGNHVV 936
Query: 193 QHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQ 250
Q + DP + I A +G + LS G V+Q+ L++ + I++E+
Sbjct: 937 QKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDEM--HQH 994
Query: 251 ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ Q+ D+YGNYVIQ L ++D+ +L+ ++ + L K+ SN
Sbjct: 995 VEQLIQDQYGNYVIQHVLEHGKQEDK----SKLICSVRGKVLTLSQHKFASN 1042
Score = 41.2 bits (95), Expect = 0.57, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 65/161 (40%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++ + I A SL GNYV+Q P
Sbjct: 814 HIVEFSQDQHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 873
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 874 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESVGGEQQVEIVREL--DGHVLKCVKDQN 931
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+V+Q +E + L Q ++ Q + L YG
Sbjct: 932 GNHVVQKC-IECVDPHAL---QFIINAFQGQVLTLSTHPYG 968
>gi|218185985|gb|EEC68412.1| hypothetical protein OsI_36587 [Oryza sativa Indica Group]
Length = 1013
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 15/289 (5%)
Query: 11 LSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFL 70
L+ G D L V + L Q+G + K IE N+ Q ++ KIT L
Sbjct: 712 LAGGGRPAWDFLLDVAALRFLRLAKDQHGCCIIQKCIEHSNDEQKYNLLCKITSS---AL 768
Query: 71 LASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D++G+ ++ ++ + + ++ LK F +L M K GS V+ CL+ +
Sbjct: 769 GLSEDQYGNYVIQFVVNLGIEW--ATSKIVKELKGNFGYLSMQKCGSHVVENCLKQASEL 826
Query: 131 KNDFIYQA--ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 188
+ I A ++ G + + KG + I +A +L
Sbjct: 827 DREMIIHELMADPKLPHIMADPFGNFVIQTALKECKGELHSSFVEAIRPHAPAL--QNDV 884
Query: 189 NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELL 246
NYV+Q V+NL + I L+GH+ LS+ KCGS VV+ LK + + I+ EL+
Sbjct: 885 NYVIQFVVNLGIEWATSKIVKELKGHFGYLSMQKCGSHVVENCLKQASELDREMIIHELM 944
Query: 247 NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ + +D +GN+VIQTAL E + +H V ++ H AL+
Sbjct: 945 ADPKLPHIMADPFGNFVIQTALKEC----KGELHSSFVEAIRPHAPALQ 989
>gi|413917932|gb|AFW57864.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 658
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 23/307 (7%)
Query: 3 GSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL +S D R +K+F + L + +G +V KF E E QL
Sbjct: 322 GSRFIQQKLEIASLDDR--EKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL----- 374
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
I DQL L S+ +G V+K+++VV + + ++ L+ + + G+
Sbjct: 375 -IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIGDQNGN 431
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLIS 176
VI KC+E + F+ L L L H+ GC + +++ + ++ I
Sbjct: 432 HVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIV 491
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ + GNYVVQHVL P AI L G V LS K S V++K L++
Sbjct: 492 QQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGT 551
Query: 237 --AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ E+++S Q Q + D++GNYV+Q L +T + L + +++ ++ HL
Sbjct: 552 LEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKLHLNE 607
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 608 LKNYTYG 614
>gi|413917933|gb|AFW57865.1| hypothetical protein ZEAMMB73_710513 [Zea mays]
Length = 654
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 146/307 (47%), Gaps = 23/307 (7%)
Query: 3 GSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
GS+++Q+KL +S D R +K+F + L + +G +V KF E E QL
Sbjct: 322 GSRFIQQKLEIASLDDR--EKIFPEILSNAIALTTDVFGNYVIQKFFEFATERQL----- 374
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
I DQL L S+ +G V+K+++VV + + ++ L+ + + G+
Sbjct: 375 -IQLADQLKGHILELSLQMYGCRVVQKVLEVVDKDRKI--DIVHELRNHILKCIGDQNGN 431
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLIS 176
VI KC+E + F+ L L L H+ GC + +++ + ++ I
Sbjct: 432 HVIQKCIECVPEDRIPFVIDPILSQILVLCTHQYGCRVIQRVLEHCHDPVTQSATMNEIV 491
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ + GNYVVQHVL P AI L G V LS K S V++K L++
Sbjct: 492 QQTFHLTDDKFGNYVVQHVLKHGKPEERSAIIQKLSGQVVILSKLKYASNVIEKCLEFGT 551
Query: 237 --AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ E+++S Q Q + D++GNYV+Q L +T + L + +++ ++ HL
Sbjct: 552 LEERDSLIGEIISSGQTFQELMKDQFGNYVVQKVL-KTCDERYLEM---ILSSIKLHLNE 607
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 608 LKNYTYG 614
>gi|342183779|emb|CCC93258.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 556
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 129/274 (47%), Gaps = 10/274 (3%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G +YLQ L S D I + + ELM+ QY F+ K + A +
Sbjct: 204 QHGCRYLQRLLCDSDPDKDIPRTIMSEIVPHVDELMTDQYANFLVQKLFDI----MPADV 259
Query: 59 ILKI-TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
LK+ T ++ G+ SV+K+I+ ++ L+ + AL + L+ G+
Sbjct: 260 RLKVATVAAPKIAAIALKPHGTFSVQKMIETISSQEELVI-IREALSKDVVRLVKDANGN 318
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
I K L+ + +FIY A C+ +A ++QGC L +++ S+R ++ I
Sbjct: 319 HAIQKVLQRFGHADKEFIYAAVAADCVTIAKNKQGCCVLQRCLEHASPSQRSTLVRHILG 378
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-KYQN 236
++ GNYV+Q+V++ D ID I A H V L + K S V++K L +
Sbjct: 379 CCLEIAEDPYGNYVLQYVISTGDNNTIDTIAIAFLPHLVQLCINKFSSNVMEKVLGRVSL 438
Query: 237 AVHYI-VEELLNSDQILQVASDKYGNYVIQTALV 269
V + V ++ + + ++ D +GNYV+QTAL
Sbjct: 439 PVQEMYVNKMCSPEVAARLIQDDFGNYVLQTALT 472
>gi|22327539|ref|NP_199125.2| pumilio 14 [Arabidopsis thaliana]
gi|75339252|sp|Q4PSD1.1|PUM14_ARATH RecName: Full=Pumilio homolog 14; Short=APUM-14; Short=AtPUM14
gi|67633854|gb|AAY78851.1| pumilio/Puf RNA-binding domain-containing protein [Arabidopsis
thaliana]
gi|332007528|gb|AED94911.1| pumilio 14 [Arabidopsis thaliana]
Length = 518
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 156/316 (49%), Gaps = 21/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+E S+ L + G +D ++ + G ELM YG V + C+ Q+ ++
Sbjct: 212 KEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVD 271
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ-SPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+T Q F+ +D G+++++ L+ + + + + ++ ++ + L + V
Sbjct: 272 IVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSNHAIFV 331
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN-----NFIDNMKGSRRKQILHL 174
IL C H + + +++C +A + GC L + + N++ R++ I+
Sbjct: 332 ILACFRLFPLHCR-LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE-IRQRLIMEA 389
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I+ NA L + GNYVVQ+++ L + +LIDA+ L G+Y L+ K GS VQK LK
Sbjct: 390 IA-NALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLK- 447
Query: 235 QNAVHYIVEELLNSDQILQVAS---DKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ +I ++ D + ++ + D +GNYVIQTA + + V + L +++++
Sbjct: 448 ---LRWIDSRVIVIDLLREIDTLLLDPFGNYVIQTAWFVS----KDDVRRMLRYHIERNI 500
Query: 292 AALRVMKYGSNKEIQK 307
+R K+G NK ++K
Sbjct: 501 PMMRCNKFG-NKVLEK 515
>gi|444318131|ref|XP_004179723.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
gi|387512764|emb|CCH60204.1| hypothetical protein TBLA_0C04040 [Tetrapisispora blattae CBS 6284]
Length = 870
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 133/276 (48%), Gaps = 15/276 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ++L D +F T ELM+ +G ++ K +E Q +II I
Sbjct: 559 GCRFLQKQLDVLGKEAADIIFNETKDHTVELMTDSFGNYLIQKLLERITLEQ-RIIIANI 617
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP--GSSVI 120
+ F+ +++ G+ +++KL++ V S + LM++K G+ V+
Sbjct: 618 S--SPHFVEIALNPHGTRALQKLVECTETDEESNIIVKSLTPSI---LMLSKDLNGNHVV 672
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ AA + + +A H GC L +D+ +R + + + N
Sbjct: 673 QKCLQKMPPKHFQFIFDAACKDFIEIATHRHGCCVLQRCLDHGTEEQRHSLCNKLLENID 732
Query: 181 SLSRHRSGNYVVQHVLNLE-DPFLID---AICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L+ GNYVVQ+V+ E D D I L+ + LSL K GS VV+K L+
Sbjct: 733 MLTMDPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLSLHKFGSNVVEKLLRTPI 792
Query: 237 AVHYIVEELLNSD---QILQVASDKYGNYVIQTALV 269
++ ELLN + +I + +D YGNYV+QTAL
Sbjct: 793 VSETVILELLNKESNQEIQTLLNDSYGNYVLQTALA 828
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 182 LSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
LS+ +GN+VVQ L P F+ DA C +++++ + G V+Q+ L + +
Sbjct: 662 LSKDLNGNHVVQKCLQKMPPKHFQFIFDAAC----KDFIEIATHRHGCCVLQRCLDHGTE 717
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
H + +LL + +L + D +GNYV+Q + + ++ ++V L+ + L
Sbjct: 718 EQRHSLCNKLLENIDMLTM--DPFGNYVVQYVITKESDDNKYDFTYKIVHLLKPKVIVLS 775
Query: 296 VMKYGSN 302
+ K+GSN
Sbjct: 776 LHKFGSN 782
>gi|255580219|ref|XP_002530940.1| pumilio, putative [Ricinus communis]
gi|223529499|gb|EEF31455.1| pumilio, putative [Ricinus communis]
Length = 1024
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + LM+ +G +V KF E ESQ + ++
Sbjct: 700 GSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTESQRTELANQL 759
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q ++ + ++ + + + G+ VI
Sbjct: 760 TAH---VLPLSLQMYGCRVIQKALEVVGVDQQTEMVAELDGSIMKCVR----DQNGNHVI 812
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNA 179
KC+E + I + + L+ H GC + +++ + +QI + I +
Sbjct: 813 QKCIECVPEDRIQSIISSFYGQVVALSTHPYGCRVIQRVLEHCESIDTQQIIMDEIMQSV 872
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYV+QHVL P AI L G V +S K S VV+K L +
Sbjct: 873 CVLAQDQYGNYVIQHVLEHGKPHERSAIICKLAGQIVKMSQQKFASNVVEKCLIFGGPEE 932
Query: 239 -HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L S ++ LQV D +GNYV+Q L ET L + ++++++ HL A
Sbjct: 933 RQILVNEMLGSTDENEPLQVMMKDPFGNYVVQKVL-ETCDDRSLEL---ILSRIKIHLNA 988
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 989 LKRYTYG 995
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 8/174 (4%)
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 188
N F +EH + + + G + ++ + +I I +A +L G
Sbjct: 677 NKTRSFELSDIVEHVVEFSTDQYGSRFIQQKLEIATAEEKNKIFPEIIPHARTLMTDVFG 736
Query: 189 NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL 246
NYV+Q + L H + LSL G V+QK L+ +V EL
Sbjct: 737 NYVIQKFFEHGTESQRTELANQLTAHVLPLSLQMYGCRVIQKALEVVGVDQQTEMVAELD 796
Query: 247 NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
S I++ D+ GN+VIQ +E + +DR+ Q +++ + AL YG
Sbjct: 797 GS--IMKCVRDQNGNHVIQKC-IECVPEDRI---QSIISSFYGQVVALSTHPYG 844
>gi|224098451|ref|XP_002311179.1| predicted protein [Populus trichocarpa]
gi|222850999|gb|EEE88546.1| predicted protein [Populus trichocarpa]
Length = 999
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + LM+ +G +V KF E + SQ+ + ++
Sbjct: 676 GSRFIQQKLETATAEENNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSASQIRELADQL 735
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K I+VV Q ++ + + R + + G+ VI
Sbjct: 736 TGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVTELNGHILRCVR----DQNGNHVI 788
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
KC+E FI + + L+ H GC + +++ ++ ++I+ I +
Sbjct: 789 QKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDTKTQRIMMDEILQSV 848
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYVVQHVL P AI L G V +S K S V++K L +
Sbjct: 849 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAE 908
Query: 239 -HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V+E+L + ++ LQ + D++ NYV+Q L ET +L + ++++++ HL A
Sbjct: 909 RQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLGL---ILSRIKVHLNA 964
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 965 LKKYTYG 971
>gi|440800301|gb|ELR21340.1| Pumiliofamily RNA binding repeat domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1039
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 42/321 (13%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L +F + LM+ +G +V KF E Q+ ++
Sbjct: 723 QHGSRFIQQQLEEASPAEKQMVFKEILPSALRLMTDVFGNYVIQKFFEHGTPEQIKIL-- 780
Query: 61 KITFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKP 115
D+L L S+ +G ++K ++V++ Q ++ + + + K +
Sbjct: 781 ----GDELIGNVLALSMQMYGCRVIQKALEVISVEQQEKVVKELEGNIMKCVK----DQN 832
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KC+E + FI +LA H GC + ++ + IL +
Sbjct: 833 GNHVIQKCIEKVPSPLIQFI-------VYHLATHPYGCRVIQRILEYCTEEQTTPILDEL 885
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
SL + + GNYV+QHVL P I LRG + LS K S VV+K ++
Sbjct: 886 LRCTISLVQDQYGNYVIQHVLEHGKPQDKAPILHKLRGQLLQLSQHKFASNVVEKCIQCA 945
Query: 235 ------QNAVHYIVEELL----NSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQR- 282
++ ++EE+L + LQ+ D+Y NYVIQ L D ++ +QR
Sbjct: 946 FGPYGDESDRQMVIEEILQLRNDGATPLQIMMKDQYANYVIQKLL------DVVNENQRD 999
Query: 283 -LVTKLQQHLAALRVMKYGSN 302
L+TK++ H+ AL+ YG +
Sbjct: 1000 QLITKIRPHVPALKKYTYGKH 1020
Score = 41.6 bits (96), Expect = 0.42, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 5/148 (3%)
Query: 124 LEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
LE N+KN F Q + H + + + G + ++ + ++ + I +A L
Sbjct: 696 LEEFRNNKNRKFTLQDIIGHIVEFSGDQHGSRFIQQQLEEASPAEKQMVFKEILPSALRL 755
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY-- 240
GNYV+Q P I + L G+ + LS+ G V+QK L+ +
Sbjct: 756 MTDVFGNYVIQKFFEHGTPEQIKILGDELIGNVLALSMQMYGCRVIQKALEVISVEQQEK 815
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTAL 268
+V+EL I++ D+ GN+VIQ +
Sbjct: 816 VVKEL--EGNIMKCVKDQNGNHVIQKCI 841
>gi|407928197|gb|EKG21067.1| hypothetical protein MPH_01611 [Macrophomina phaseolina MS6]
Length = 943
Score = 84.0 bits (206), Expect = 8e-14, Method: Composition-based stats.
Identities = 79/320 (24%), Positives = 148/320 (46%), Gaps = 19/320 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V KF E ++SQ ++
Sbjct: 555 QHGSRFIQQKLETANSDEKERVFKEIQPNAMQLMTDVFGNYVIQKFFEHGDQSQKRILAN 614
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G V+K ++ +V Q ++ + + + R K + G+
Sbjct: 615 KMKGH---VLTLSLQMYGCRVVQKALEHVLVDQQADMVKELENNVLRCVK----DQNGNH 667
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E FI A + H L+ H GC + +++ + R+ IL +
Sbjct: 668 VIQKAIERVPAQHIQFIIDAFIGHVSSLSVHGYGCRVIQRMLEHCEEPARRAILSELHAC 727
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---- 234
A +L + GNYV QH++ P AI ++ + + K S VV+K L +
Sbjct: 728 APTLIPDQYGNYVTQHIIEHGAPDDRAAIIEIVKTQLLAFAKHKFASNVVEKCLVFGSDD 787
Query: 235 --QNAVHYIVEELLNSDQIL-QVASDKYGNYVIQTALVETMRQDRLSVHQRL---VTKLQ 288
+ + I E+ + L + D YGNYVIQ L D ++ + L + K +
Sbjct: 788 ERREIMLKICEKTERGESTLVMLIKDGYGNYVIQKLLDTLNATDYMTFVEYLQPEMAKAK 847
Query: 289 QHLAALRVMKYGSNKEIQKK 308
+ L+ +V G + + Q+K
Sbjct: 848 KTLSGKQVQAVGVSADDQRK 867
>gi|356550736|ref|XP_003543740.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 6,
chloroplastic-like [Glycine max]
Length = 952
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 142/309 (45%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S + +F V T +LM+ +G +V KF E + Q +
Sbjct: 635 QHGSRFIQQKLESCGVEEKELVFKEVLPHTSKLMTDVFGNYVIQKFFEYGSPEQRKELAN 694
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 695 RLLGQ---ILPLSLQMYGCRVIQKALEVIDLEQKAQLVHELDGNVMRCVR----DQNGNH 747
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E DFI A L+ H GC + +++ + Q I+ I
Sbjct: 748 VIQKCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRVLEHCSNEVQCQFIVDEILE 807
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ +L++ + GNYV QHVL P I L GH LS K S VV+K L+Y +A
Sbjct: 808 SVFTLAQDQYGNYVTQHVLERGKPQERSQIIHKLSGHIFQLSQHKFASNVVEKCLEYGDA 867
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IV +D +L + D++ NYVIQ R + L+++++ H
Sbjct: 868 TDRQLLIAEIVGHDKQNDNLLTMMKDQFANYVIQKVFEICSENQRAT----LLSRIRLHA 923
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 924 HALKKYTYG 932
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 29/292 (9%)
Query: 26 VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI-TFQDQLFLLA---------SVD 75
SG L+SG G+ F +S ++ ++A+ + ++ + + + F L+ S D
Sbjct: 579 ASGRNGGLLSGWQGQRAF----DSAHDPKIAIFLEELKSGKGRRFELSDIIGHIVEFSTD 634
Query: 76 KFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKND 133
+ GS +++ ++ V + + V+ +L + G+ VI K E +
Sbjct: 635 QHGSRFIQQKLESCGVEEKELVFKEVLPHTSKLMTDVF----GNYVIQKFFEYGSPEQRK 690
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
+ L L L+ GC + ++ + ++ Q++H + N R ++GN+V+Q
Sbjct: 691 ELANRLLGQILPLSLQMYGCRVIQKALEVIDLEQKAQLVHELDGNVMRCVRDQNGNHVIQ 750
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAV--HYIVEELLNSDQ 250
+ ID I A RG LS+ G V+Q+ L++ N V +IV+E+L S
Sbjct: 751 KCIESIPTKNIDFIISAFRGQIALLSMHPYGCRVIQRVLEHCSNEVQCQFIVDEILES-- 808
Query: 251 ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ +A D+YGNYV Q L Q+R +++ KL H+ L K+ SN
Sbjct: 809 VFTLAQDQYGNYVTQHVLERGKPQER----SQIIHKLSGHIFQLSQHKFASN 856
>gi|358377871|gb|EHK15554.1| hypothetical protein TRIVIDRAFT_165243 [Trichoderma virens Gv29-8]
Length = 308
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 16/276 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL S +S +++F + +LM +G +V KF E SQL IL
Sbjct: 38 GSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYG--SQLQKKILAE 95
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ L SV + V+K ++ +V Q L + + R+ K + G+ V+
Sbjct: 96 KMKGKVVDL-SVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIK----DQNGNHVV 150
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E DFI A LA H GC + +++ + + +I+ + +A
Sbjct: 151 QKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQ 210
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + GNYV QHV+ +P + I + G + LS K S VV+K ++Y
Sbjct: 211 ILITDQYGNYVAQHVIQNGEPEDRERIIQLVMGQLLTLSKHKFASNVVEKCIEYGTPAQR 270
Query: 240 -YIVEELLNS-----DQILQVASDKYGNYVIQTALV 269
I E+L + + + Q+ D++GNYVI+ +LV
Sbjct: 271 TTIREQLTTTGADGNNPLQQMMRDQFGNYVIRKSLV 306
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 168 RKQILHLISVNAASLSRH-----------RSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+K + H++ A L+R ++GN+VVQ ++ L ID I A+RG
Sbjct: 115 QKALEHILVEQQAELTRELEPEILRVIKDQNGNHVVQKIIELVPRQYIDFIMNAVRGQVT 174
Query: 217 DLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQ 274
L+ G V+Q+ L++ I+ EL S QIL +D+YGNYV Q + +
Sbjct: 175 PLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQIL--ITDQYGNYVAQHVIQNGEPE 232
Query: 275 DRLSVHQRLVTKLQQHLAALRVMKYGSN 302
DR +R++ + L L K+ SN
Sbjct: 233 DR----ERIIQLVMGQLLTLSKHKFASN 256
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ ++Q+ I NA L + GNYVVQ
Sbjct: 28 HAVEFSGDQHGSRFIQQKLESANSDEKEQVFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN-----SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAELTRELEPEILRVIK 142
Query: 257 DKYGNYVIQTALVETMRQ 274
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|356558296|ref|XP_003547443.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 982
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 150/313 (47%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ GS+++Q+KL S G+ + L +F V +LM+ +G +V KF E + Q +
Sbjct: 666 QHGSRFIQQKLESCSGEEKAL--VFKEVLPHASKLMTDVFGNYVIQKFFEYGSSEQRREL 723
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPG 116
++ Q L S+ +G ++K ++V+ Q L++ + + R + + G
Sbjct: 724 ADRLVGQ---ILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVR----DQNG 776
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLI 175
+ VI KC+E K FI A L+ H GC + +++ M S+ + I+ I
Sbjct: 777 NHVIQKCIESIQTKKISFILSAFRGQVATLSMHPYGCRVIQRVLEHCMDESQCQFIVDEI 836
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ +L++ + GNYV QHVL P I L GH V LS K S VV+K L+Y
Sbjct: 837 LESVCALAQDQYGNYVTQHVLERGKPQERSQILSKLSGHIVQLSQHKFASNVVEKCLEYG 896
Query: 236 NAVHY--IVEELLNS----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKL 287
+A +V E+ D +L + D++ NYV+Q + D S +QR L++ +
Sbjct: 897 DATERELLVAEIFGHDDQCDNLLTMMKDQFANYVVQKVI------DICSENQRAMLLSHV 950
Query: 288 QQHLAALRVMKYG 300
+ H AL+ YG
Sbjct: 951 RIHAHALKKYTYG 963
>gi|449459894|ref|XP_004147681.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
gi|449503257|ref|XP_004161912.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1016
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + D +F + LM+ +G +V KF E SQ+ +
Sbjct: 691 GSRFIQQKLETASVEEKDMVFHEIMPQALSLMTDVFGNYVVQKFFEHGTASQIRELA--- 747
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 748 ---DQLNGHVLALSLQMYGCRVIQKAIEVVDVDQQTKMVTELDGQIMRCVR----DQNGN 800
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
V+ KC+E FI + + L+ H GC + +++ + + I+ I
Sbjct: 801 HVVQKCIECIPEEAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHNPKTQHIMMDEIL 860
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ +L++ + GNYVVQHVL P AI L G V +S K S V++K L +
Sbjct: 861 QSVCTLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLTFGT 920
Query: 237 AV--HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ +V E+L + ++ LQV D++ NYV+Q L ET +L + ++ +++ H
Sbjct: 921 SAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVH 976
Query: 291 LAALRVMKYG 300
L AL+ YG
Sbjct: 977 LNALKKYTYG 986
>gi|238494168|ref|XP_002378320.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
gi|220694970|gb|EED51313.1| mRNA binding protein Pumilio 2, putative [Aspergillus flavus
NRRL3357]
Length = 550
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + G + +LM+ +G +V K E N++Q ++
Sbjct: 147 QHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 206
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 207 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRCVRDQNGN 258
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + F+ A + LA H GC + +++ K R+ IL + V
Sbjct: 259 HVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDREAILAELHV 318
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N ED + + + + S K S VV+K +++
Sbjct: 319 CTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVM-SNLLTYSKHKFASNVVEKSIEFGQ 377
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ H I+ L ++D +L + D++GNYVIQ L + +R + LV +++
Sbjct: 378 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA----LVEEIKP 433
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 434 LLSQLKKYSYG 444
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I ++ L GNYVVQ + +
Sbjct: 139 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQ 198
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL +L+ D+
Sbjct: 199 TQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKEL--EHHVLRCVRDQN 256
Query: 260 GNYVIQTAL 268
GN+VIQ A+
Sbjct: 257 GNHVIQKAI 265
>gi|158828189|gb|ABW81068.1| Mpt5-3 [Arabidopsis lyrata subsp. lyrata]
Length = 968
Score = 84.0 bits (206), Expect = 9e-14, Method: Composition-based stats.
Identities = 81/313 (25%), Positives = 143/313 (45%), Gaps = 28/313 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 639 GSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELGEKL 698
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMTKPG 116
D + L S+ +G ++K I+VV L HVM ++ + G
Sbjct: 699 I--DNVLPL-SLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVMRCVR--------DQNG 747
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 175
+ V+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 748 NHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEI 807
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 808 LSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 867
Query: 235 -QNAVHYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++
Sbjct: 868 GPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKV 923
Query: 290 HLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 924 HLNALKKYTYGKH 936
>gi|159491213|ref|XP_001703567.1| puf protein [Chlamydomonas reinhardtii]
gi|158270641|gb|EDO96479.1| puf protein [Chlamydomonas reinhardtii]
Length = 314
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 14/307 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + L+ F V LM+ +G +V KF+E Q + L
Sbjct: 3 QHGSRFIQQKLEGVAAEDLEAAFAEVLPRILHLMTDVFGNYVVQKFLEHGTPEQR--LKL 60
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ L S+ +G V+K ++ + + +++ L + + G+ VI
Sbjct: 61 GRALHGHVLQL-SLQMYGCRVVQKALETFPEEAQM--ELVTELDGHIMRCVRDQNGNHVI 117
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNA 179
KC+E H+ + L + L+ H GC + ++++K +RR+ ++ I A
Sbjct: 118 QKCIECVPTHRIAAVLDNFLLCVVPLSTHPFGCRIIQRILEHVKDARRRSAVMSDILAAA 177
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYV+QHVL P +I +L V LS+ K S VV+K L Y +
Sbjct: 178 VQLTQDQYGNYVIQHVLERGTPEERASIAASLASSVVPLSMHKFASNVVEKCLTYGSTAD 237
Query: 239 -HYIVEELLNS--DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V +L + D + + D++GNYV+Q L + R + ++ +++Q L AL+
Sbjct: 238 RDLLVSRMLGAHGDPVQAMMKDQFGNYVVQKVLEVCSDEQR----EVMLARVRQQLHALK 293
Query: 296 VMKYGSN 302
YG +
Sbjct: 294 RYTYGKH 300
>gi|4539306|emb|CAB39609.1| pumilio-like protein [Arabidopsis thaliana]
gi|7269439|emb|CAB79443.1| pumilio-like protein [Arabidopsis thaliana]
Length = 849
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +LM+ +G +V KF E N +Q +
Sbjct: 532 QHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELAD 591
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 592 QLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVI 646
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLI 175
KC+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 647 QKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESV 706
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+Y
Sbjct: 707 CV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYG 762
Query: 236 NAVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
V I++E+ D+ +L + D+YGNYV+Q RL+ L ++++
Sbjct: 763 GRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRM 818
Query: 290 HLAALRVMKYG 300
H +AL+ YG
Sbjct: 819 HASALKKYTYG 829
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + +D ++ +R ++ + R ++GN+V+Q + + + +A
Sbjct: 606 GCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAF 665
Query: 212 RGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
RG LS+ G V+Q+ L+ + + +I EE+L S + ++ D+YGNYV Q L
Sbjct: 666 RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 723
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ ++R +R+ KL H+ L + K+ SN
Sbjct: 724 EKGTSEER----ERIGRKLSGHIVQLSLHKFASN 753
>gi|308163019|gb|EFO65384.1| Pumilio-family RNA-binding protein, putative [Giardia lamblia P15]
Length = 652
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 20/301 (6%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSG----QYGRFVFGKFIESCNESQLA 56
G + LQ+ L+ SR L +F + T LM G G + F K IE + SQ
Sbjct: 333 GCKTLQQYLTDFPDKSRYLLDVF-IAEYNTPSLMEGLLIHPSGNYCFQKVIEVSDASQRL 391
Query: 57 LIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTK 114
I+L I QD LF + + G+ S++KL + V+ + ++ + R+ K ++
Sbjct: 392 KILLLI--QDSLFEICH-NLHGTRSIQKLFERVSSDEEKAIIAQQLGTGDRIIKLIVDIN 448
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ + +C+E FIY + + ++ H+ GC + +D ++R QI+
Sbjct: 449 -GNHCVQRCIETFAPKDCTFIYDQIIRELVLVSTHQHGCCIIQRCLDLCSEAQRVQIVTA 507
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLI-----DAICFALRGHYVDLSLTKCGSFVVQ 229
I + L R GNYV Q+ L + L D + + GH L K S V+
Sbjct: 508 IKTHVMELIVDRFGNYVFQYSLEKANNGLCGSISADDLIRPILGHEGSLVSQKFSSHAVE 567
Query: 230 KFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
K LKY + I E L+ SD L +A DK+GNYVIQ + + + QR++
Sbjct: 568 KCLKYGSRKIRTLITENLMASDSFLSLAMDKFGNYVIQRVFTCATDEQKRIISQRVLASP 627
Query: 288 Q 288
+
Sbjct: 628 E 628
>gi|440291461|gb|ELP84730.1| meiotic coiled-coil protein, putative [Entamoeba invadens IP1]
Length = 470
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 16/310 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ++L G++ L+ ++ + LM +G ++ K IE Q II +I
Sbjct: 158 GCRFLQQQLEEGNTGTLEYIYQQIVPLLDSLMIDPFGNYLCQKLIEVVKPDQRVEIIEEI 217
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
D++ + S + +G+ SV+KLI A S + + L+ L+ G+ VI +
Sbjct: 218 G--DKIHTI-SRNIYGTRSVQKLINS-ASSKNEVNLIRKYLEPYVINLIFDINGNHVIQE 273
Query: 123 CLEPSYNHKNDFIYQAALEH--CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
CL+ +N FI+ A LE+ + ++ H+ GC + IDN + +++ I +
Sbjct: 274 CLKVFDKPENSFIFDAILENGNLVRVSSHKHGCCVVQRCIDNGNEEQLSSLVNDIVKYSL 333
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
+L + GNYVVQ+VL +E + C + + ++LS+ K S V++K + N
Sbjct: 334 ALVKDAFGNYVVQYVLGIEGVSVRVTNC--IIENLIELSMQKFSSNVIEKLVATGNCKVK 391
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
I E+ L + + D + NYVIQT L ++ + +L RL + H+ ++
Sbjct: 392 EIIFEQFLKFKDVAILLQDSFANYVIQTCLDKSWGEYKL----RLSNWIIPHVGIIKNTP 447
Query: 299 YGSNKEIQKK 308
Y K+IQ K
Sbjct: 448 Y--YKKIQGK 455
>gi|302765685|ref|XP_002966263.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
gi|300165683|gb|EFJ32290.1| hypothetical protein SELMODRAFT_86145 [Selaginella moellendorffii]
Length = 324
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 24/313 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 9 QHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELAQ 68
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G ++K ++V V Q L+ + + R + + G+
Sbjct: 69 QLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR----DQNGNH 121
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + FI A L L+ H GC + +++ +++Q I+ I
Sbjct: 122 VIQKCIECVPPDRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILR 181
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ SL++ + GNYVVQHVL I L G V +S K S V++K L++
Sbjct: 182 STCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQFGGP 241
Query: 238 V--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
++ E+L S ++ LQ + D++ NYV+Q L + DR QR L+T+++
Sbjct: 242 AERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL--EICDDR----QREILLTRIKV 295
Query: 290 HLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 296 HLHALKKYTYGKH 308
>gi|18416639|ref|NP_567733.1| pumilio 6 protein [Arabidopsis thaliana]
gi|75168940|sp|Q9C5E7.1|PUM6_ARATH RecName: Full=Pumilio homolog 6, chloroplastic; Short=APUM-6;
Short=AtPUM6; Flags: Precursor
gi|13430772|gb|AAK26008.1|AF360298_1 putative pumilio protein [Arabidopsis thaliana]
gi|22136912|gb|AAM91800.1| putative pumilio protein [Arabidopsis thaliana]
gi|227206416|dbj|BAH57263.1| AT4G25880 [Arabidopsis thaliana]
gi|332659727|gb|AEE85127.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 861
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 140/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +LM+ +G +V KF E N +Q +
Sbjct: 544 QHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELAD 603
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 604 QLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVI 658
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLI 175
KC+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 659 QKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESV 718
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+Y
Sbjct: 719 CV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYG 774
Query: 236 NAVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
V I++E+ D+ +L + D+YGNYV+Q RL+ L ++++
Sbjct: 775 GRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRM 830
Query: 290 HLAALRVMKYG 300
H +AL+ YG
Sbjct: 831 HASALKKYTYG 841
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 119/297 (40%), Gaps = 52/297 (17%)
Query: 9 EKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQL 68
E+L SG R D ++G E + Q+G + +E+C + A + +I
Sbjct: 518 EELKSGKGRRFD--LSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREI------ 569
Query: 69 FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSY 128
L H + +F G+ VI K E
Sbjct: 570 ---------------------------LPHACKLMTDVF--------GNYVIQKFFEYGN 594
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 188
+ + + + + L+ GC + +D ++ +R ++ + R ++G
Sbjct: 595 STQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNG 654
Query: 189 NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEEL 245
N+V+Q + + + +A RG LS+ G V+Q+ L+ + + +I EE+
Sbjct: 655 NHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEI 714
Query: 246 LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L S + ++ D+YGNYV Q L + ++R +R+ KL H+ L + K+ SN
Sbjct: 715 LES--VCVLSKDQYGNYVTQHVLEKGTSEER----ERIGRKLSGHIVQLSLHKFASN 765
>gi|242020205|ref|XP_002430546.1| pumilio, putative [Pediculus humanus corporis]
gi|212515710|gb|EEB17808.1| pumilio, putative [Pediculus humanus corporis]
Length = 588
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 29/312 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + + LM+ +G +V KF E Q A IL
Sbjct: 269 QHGSRFIQQKLERATVNEKQMVFNEILPSAYNLMTDVFGNYVIQKFFEFGTPEQKA--IL 326
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+ + LLA + +G ++K ++ + L HV+ +K +
Sbjct: 327 SQIVRGHVLLLA-LQMYGCRVIQKALESLTSEQQQEIVRELDGHVLKCVK--------DQ 377
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E H FI A L+ H GC + +++ + IL
Sbjct: 378 NGNHVVQKCIERVDPHALQFIINALSGQVFALSTHPYGCRVIQRILEHCTPEQVAPILEE 437
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ +A L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 438 LHSHAEQLVQDQFGNYVIQHVLEHGKPEDKSKIINNVRGKVLALSQHKFASNVVEKCVTH 497
Query: 235 QNAVH--YIVEELLN-SDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQ 288
++EE+ N +D LQ + D+Y NYV+Q + D QR L+ K++
Sbjct: 498 ATRTERSVLIEEVCNYNDNALQLMMKDQYANYVVQKMI------DVCEPTQRKILMHKIR 551
Query: 289 QHLAALRVMKYG 300
H++ALR YG
Sbjct: 552 GHISALRKYTYG 563
>gi|224112727|ref|XP_002316273.1| predicted protein [Populus trichocarpa]
gi|222865313|gb|EEF02444.1| predicted protein [Populus trichocarpa]
Length = 938
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 150/307 (48%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + LM+ +G +V KF E + SQ+ + ++
Sbjct: 629 GSRFIQQKLETAMTEEKNMVFDEIMPQALSLMTDVFGNYVIQKFFEHGSASQIRELADQL 688
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K I+VV Q ++ + + R + + G+ VI
Sbjct: 689 TGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVTELDGHIMRCVR----DQNGNHVI 741
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
KC+E FI + + L+ H GC + +++ + ++ ++I+ I +
Sbjct: 742 QKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCQDTKTQRIMMDEILQSV 801
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYVVQHVL P AI L G V +S K S V++K L +
Sbjct: 802 CMLAQDQYGNYVVQHVLEHGKPHERSAIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAE 861
Query: 239 -HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V+E+L + ++ LQ + D++ NYV+Q L ET +L + ++ +++ HL A
Sbjct: 862 RQALVDEMLGTTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNA 917
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 918 LKKYTYG 924
>gi|340518502|gb|EGR48743.1| predicted protein [Trichoderma reesei QM6a]
Length = 341
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 133/283 (46%), Gaps = 16/283 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +S +++F + +LM +G +V KF E SQL IL
Sbjct: 38 GSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYG--SQLQKKILAE 95
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ L SV + V+K ++ +V Q L + + R+ K + G+ V+
Sbjct: 96 KMKGKVVDL-SVQVYACRVVQKALEHILVEQQAALTRELEPEILRVIK----DQNGNHVV 150
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E DFI +A LA H GC + +++ + + +I+ + +A
Sbjct: 151 QKIIELVPRQHIDFIMKAVRGQVTPLASHAYGCRVIQRLLEHGTEADKAEIMGELHASAQ 210
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + GNYV QHV+ +P + I + G + LS K S VV+K ++Y
Sbjct: 211 LLITDQYGNYVAQHVIQNGEPEDRERIIRLVMGQLLTLSKHKFASNVVEKCIEYGTPAQR 270
Query: 240 -YIVEELLNS-----DQILQVASDKYGNYVIQTALVETMRQDR 276
I E+L + + + Q+ D++GNYVIQ L + +R
Sbjct: 271 TTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKLLGQLQGDER 313
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++QI I NA L + GNYV+Q
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNAVQLMKDVFGNYVIQKFFEYGSQ 87
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN-----SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAALTRELEPEILRVIK 142
Query: 257 DKYGNYVIQTALVETMRQ 274
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|359486781|ref|XP_002278108.2| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1015
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E SQ+ + ++
Sbjct: 694 GSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTASQIRELADQL 753
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K I+VV Q ++ + + R + + G+ VI
Sbjct: 754 TGH---VLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMELDGNVMRCVR----DQNGNHVI 806
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
KC+E FI + + L+ H GC + +++ + ++I+ I +
Sbjct: 807 QKCIECIPQDSIQFIISTFYDQVVTLSTHPYGCRVIQRVLEHCHDPKTQRIMMDEILQSV 866
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNA 237
L++ + GNYVVQHVL P +I L G V +S K S VV+K L + +
Sbjct: 867 RMLAQDQYGNYVVQHVLEHGKPHERSSIINELAGQIVQMSQQKFASNVVEKCLTFGAPSE 926
Query: 238 VHYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L S ++ LQ + D++ NYV+Q L ET +L + ++ +++ HL A
Sbjct: 927 RQILVNEMLGSTDENEPLQAMMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNA 982
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 983 LKKYTYG 989
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + + H I A SL GNYV+Q
Sbjct: 684 HVVEFSADQYGSRFIQQKLETATTEEKDMVFHEIMPQALSLMTDVFGNYVIQKFFEHGTA 743
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKY 259
I + L GH + LSL G V+QK ++ + +V EL +++ D+
Sbjct: 744 SQIRELADQLTGHVLTLSLQMYGCRVIQKAIEVVDLDQQTKMVMEL--DGNVMRCVRDQN 801
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ +E + QD + Q +++ + L YG
Sbjct: 802 GNHVIQKC-IECIPQDSI---QFIISTFYDQVVTLSTHPYG 838
>gi|302793089|ref|XP_002978310.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
gi|300154331|gb|EFJ20967.1| hypothetical protein SELMODRAFT_107963 [Selaginella moellendorffii]
Length = 354
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 24/313 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 9 QHGSRFIQQKLETATAEDKAMVFQEVFPQAVALMTDVFGNYVIQKFFEHGTAQQRKELAQ 68
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G ++K ++V V Q L+ + + R + + G+
Sbjct: 69 QLPSR---VLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR----DQNGNH 121
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + FI A L L+ H GC + +++ +++Q I+ I
Sbjct: 122 VIQKCIECVPADRIQFIICAFYGQVLALSTHPYGCRVIQRVLEHCTDEQKQQGIMQEILR 181
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ SL++ + GNYVVQHVL I L G V +S K S V++K L++
Sbjct: 182 STCSLAQDQYGNYVVQHVLEHGTQPERSEIITKLAGQIVQMSQHKFASNVIEKCLQFGGP 241
Query: 238 V--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
++ E+L S ++ LQ + D++ NYV+Q L + DR QR L+T+++
Sbjct: 242 AERQILINEMLGSTDENEALQAMMKDQFANYVVQKVL--EICDDR----QREILLTRIKV 295
Query: 290 HLAALRVMKYGSN 302
HL AL+ YG +
Sbjct: 296 HLHALKKYTYGKH 308
>gi|227204207|dbj|BAH56955.1| AT4G25880 [Arabidopsis thaliana]
Length = 806
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 29/313 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +LM+ +G +V KF E N +Q
Sbjct: 487 QHGSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQ------ 540
Query: 61 KITFQDQLF--LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ DQL ++ + +G ++K + V+ P + L + + G+
Sbjct: 541 RKELADQLMGQIVPLLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNH 598
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILH 173
VI KC+E K F+ A L+ H GC + ++ + ++IL
Sbjct: 599 VIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILE 658
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+
Sbjct: 659 SVCV----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLE 714
Query: 234 YQNAVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
Y V I++E+ D+ +L + D+YGNYV+Q RL+ L +++
Sbjct: 715 YGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRV 770
Query: 288 QQHLAALRVMKYG 300
+ H +AL+ YG
Sbjct: 771 RMHASALKKYTYG 783
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + +D ++ +R ++ + R ++GN+V+Q + + + +A
Sbjct: 560 GCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAF 619
Query: 212 RGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
RG LS+ G V+Q+ L+ + + +I EE+L S + ++ D+YGNYV Q L
Sbjct: 620 RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 677
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ ++R +R+ KL H+ L + K+ SN
Sbjct: 678 EKGTSEER----ERIGRKLSGHIVQLSLHKFASN 707
>gi|328866169|gb|EGG14555.1| RNA binding protein [Dictyostelium fasciculatum]
Length = 652
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 21/308 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+K+ + ++ +F V LM+ +G +V KF E + Q ++ K+
Sbjct: 341 GSRIIQQKIENANAEDKQLVFDEVIVAVHSLMTDVFGNYVLQKFFEHGSSDQKRILAEKL 400
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
LL ++ +G ++K I+ + ++ ++ L + + G+ VI K
Sbjct: 401 KGN---ILLLALQMYGCRVIQKAIESIELDQQIM--LIQELDGHIVQCVTDQNGNHVIQK 455
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E + FI + H +LA H GC + +++ + IL + A SL
Sbjct: 456 CIEKIPTNLIQFIIDSFNGHIYHLATHPYGCRVIQRILEHCSEQQVAPILEELMRCAVSL 515
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--Y 240
+ + GNYV+QHVL AI L LS K S V++K ++Y +
Sbjct: 516 VQDQYGNYVIQHVLEHGTQSDKSAIVQKLHNQVYQLSQHKFASNVIEKCVQYGSTAERAM 575
Query: 241 IVEELL------NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHLA 292
I+ E+L S +L+V D Y NYVIQ L D + QR ++ ++Q ++A
Sbjct: 576 IINEILGDQSGTTSSAMLKVLKDPYANYVIQKIL------DIVDQSQREMIIQRIQPYIA 629
Query: 293 ALRVMKYG 300
LR + YG
Sbjct: 630 TLRKVTYG 637
>gi|326512890|dbj|BAK03352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 603
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 286 QHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAA 345
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
K+ + S+ +G ++K ++V+ L + ++ L +M + G+
Sbjct: 346 KLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRCVRDQNGN 397
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLIS 176
VI KC+E F+ A L+ H GC + +++ G R Q I+ I
Sbjct: 398 HVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEIL 457
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+A L++ + GNYV QHV+ I L G V +S K S V++K ++ +
Sbjct: 458 QSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGD 517
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ IVE+ +D +L + D+Y NYV+Q ++ET ++ + LV++++ H
Sbjct: 518 IAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQK-ILETCNDEQREL---LVSRVKGH 573
Query: 291 LAALRVMKYG 300
L ALR YG
Sbjct: 574 LQALRKYTYG 583
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+L H S + +F G+ VI K E + + H + L+ GC
Sbjct: 311 VLPHASSLMTDVF--------GNYVIQKFFEHGTPEQRRDLAAKLAGHVVPLSLQMYGCR 362
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ ++ M+ ++ ++ + N R ++GN+V+Q + I + A RG
Sbjct: 363 VIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQ 422
Query: 215 YVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVET 271
LS+ G V+Q+ L++ + I++E+L S IL A D+YGNYV Q + +
Sbjct: 423 VASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL--AQDQYGNYVTQHVVEKG 480
Query: 272 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+R ++++KL + + K+ SN
Sbjct: 481 KSHERA----QIISKLAGQVVTMSQNKFASN 507
>gi|33589344|gb|AAQ22439.1| RE63138p [Drosophila melanogaster]
Length = 1533
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 1123 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 1182
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 1183 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 1237
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1238 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 1297
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1353
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 1354 RGERTGLIDEVCTFNDNALHMMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 1409
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1410 ALRKYTYGKHINAKLEK 1426
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 1120 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 1175
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 1176 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 1235
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 1236 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 1295
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 1296 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 1343
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 1115 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 1174
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 1175 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 1232
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 1233 GNHVVQKCI 1241
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 1197 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 1254
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 1255 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 1309
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 1310 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1369
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1370 NALHMMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 1427
>gi|390336472|ref|XP_794621.3| PREDICTED: pumilio homolog 1 [Strongylocentrotus purpuratus]
Length = 1183
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 33/316 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + G + LM+ +G +V KF E Q +
Sbjct: 861 QHGSRFIQQKLERATPTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPEQKQALAQ 920
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLY---------HVMSALKRLFKFLM 111
+I + + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 921 RI--RGHVLPLA-LQMYGCRVIQKALESI---PPELQTEMVKELDGHVLKCVK------- 967
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L+ H GC + +++ + K +
Sbjct: 968 -DQNGNHVVQKCIECVEPAALQFIVDAFRGQVYSLSTHPYGCRVIQRILEHCIVEQTKPL 1026
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + SL + + GNYV+QHVL P I +RG + LS K S VV+K
Sbjct: 1027 LDELHQQTESLVQDQYGNYVIQHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFASNVVEKC 1086
Query: 232 LKYQNAVH--YIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ + + +++E+ N + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 1087 ITHSSRPERALLIDEVCSYNDGALYTMMKDQYANYVVQKMIDVSEPNQRKILMH-----K 1141
Query: 287 LQQHLAALRVMKYGSN 302
++ ++A+LR YG +
Sbjct: 1142 IRPYVASLRKYTYGKH 1157
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 10/198 (5%)
Query: 105 RLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 164
R ++ + PG S +L+ + N + + + H + + + G + ++
Sbjct: 818 RSTAYMEKSAPGRSRLLE--DFRNNRFPNLQLRDLVSHIVEFSQDQHGSRFIQQKLERAT 875
Query: 165 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCG 224
+ R+ + I A SL GNYV+Q P A+ +RGH + L+L G
Sbjct: 876 PTERQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGLPEQKQALAQRIRGHVLPLALQMYG 935
Query: 225 SFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR 282
V+QK L+ +V+EL +L+ D+ GN+V+Q +E + L Q
Sbjct: 936 CRVIQKALESIPPELQTEMVKEL--DGHVLKCVKDQNGNHVVQKC-IECVEPAAL---QF 989
Query: 283 LVTKLQQHLAALRVMKYG 300
+V + + +L YG
Sbjct: 990 IVDAFRGQVYSLSTHPYG 1007
Score = 37.4 bits (85), Expect = 9.6, Method: Composition-based stats.
Identities = 50/238 (21%), Positives = 99/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S + ++ + G + + Q G V K IE + L I+
Sbjct: 935 GCRVIQKALESIPPELQTEMVKELDGHVLKCVKDQNGNHVVQKCIECVEPAALQFIV--D 992
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ +V Q+ PLL L + + L+ + G+ VI
Sbjct: 993 AFRGQVYSL-STHPYGCRVIQRILEHCIVEQTKPLL----DELHQQTESLVQDQYGNYVI 1047
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
LE I L L+ H+ + I + R ++ + S N
Sbjct: 1048 QHVLEHGRPEDKSKIVLEMRGKVLVLSQHKFASNVVEKCITHSSRPERALLIDEVCSYND 1107
Query: 180 ASL---SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + +R + L G ++ K K+
Sbjct: 1108 GALYTMMKDQYANYVVQKMIDVSEPNQRKILMHKIRPYVASLRKYTYGKHILAKLEKF 1165
>gi|262411024|gb|ACY66878.1| P30Sh115J16 [Saccharum hybrid cultivar R570]
Length = 764
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 145/309 (46%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 447 QHGSRFIQQKLENCTAEEKASVFAEVLPHASSLMTDVFGNYVIQKFFEHGTREQRRDLAT 506
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 507 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHVMRCVR----DQNGNH 559
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E F+ A L+ H GC + +++ G+ + Q I+ I
Sbjct: 560 VIQKCIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQ 619
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYV QHVL I L G V +S K S V++K ++ +
Sbjct: 620 SACILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKFASNVIEKCFQHGDI 679
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ IVE+ +D +L + D+Y NYV+Q ++ET +++ + L+++++ H+
Sbjct: 680 AERDLLIRQIVEQTEANDNLLAMMKDQYANYVVQ-KILETCNENQREL---LLSRVKGHM 735
Query: 292 AALRVMKYG 300
ALR YG
Sbjct: 736 QALRKYTYG 744
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 21/213 (9%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+L H S + +F G+ VI K E + + + H L L+ GC
Sbjct: 472 VLPHASSLMTDVF--------GNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCR 523
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ ++ M+ ++ ++H + + R ++GN+V+Q + I + A +G
Sbjct: 524 VIQKALEVMELDQKIDLVHELDGHVMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQ 583
Query: 215 YVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVET 271
LS+ G V+Q+ L++ + I++E+L S IL A D+YGNYV Q L
Sbjct: 584 VASLSMHPYGCRVIQRVLEHCGGNSQGQCIIDEILQSACIL--AQDQYGNYVTQHVL--- 638
Query: 272 MRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
+R H+R ++TKL + + K+ SN
Sbjct: 639 ---ERGKAHERSQIITKLAGQVVTMSQNKFASN 668
>gi|270016510|gb|EFA12956.1| pumilio [Tribolium castaneum]
Length = 1102
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 33/316 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q +
Sbjct: 772 QHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAEQKTTLAQ 831
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
K+ + + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 832 KV--RGHVLPLA-LQMYGCRVIQKALESI---PPEQQQEIVRELDGHVLKCVK------- 878
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E + FI Q+ L+ H GC + +++ + I
Sbjct: 879 -DQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPI 937
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 938 LAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKC 997
Query: 232 LKYQNAVH--YIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ + ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 998 VTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQRKVLMH-----K 1052
Query: 287 LQQHLAALRVMKYGSN 302
++ HL +LR YG +
Sbjct: 1053 IRPHLNSLRKYTYGKH 1068
Score = 39.3 bits (90), Expect = 2.3, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 95/235 (40%), Gaps = 39/235 (16%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G+ +Q+ + D L + SG + L + YG V + +E C Q A I+
Sbjct: 880 QNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPILA 939
Query: 61 KI-TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
++ DQL D+FG+ ++ +++ P ++S+++ L K S+V
Sbjct: 940 ELHQHTDQLIQ----DQFGNYVIQHVLE--HGKPEDKSQLISSVRGKVLALSQHKFASNV 993
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+ + E L + E+ C F DN LH+
Sbjct: 994 VEKCV----------THATRAERALLI---EEVC----GFNDNA--------LHV----- 1023
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + + NYVVQ ++++ +P + +R H L G ++ K KY
Sbjct: 1024 --MMKDQYANYVVQKMIDVSEPTQRKVLMHKIRPHLNSLRKYTYGKHIIAKLEKY 1076
>gi|358336596|dbj|GAA55061.1| pumilio homolog 2 [Clonorchis sinensis]
Length = 1498
Score = 82.8 bits (203), Expect = 2e-13, Method: Composition-based stats.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 31/323 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + + +F + + +LM+ +G +V KF E + Q L+
Sbjct: 1113 QHGSRFIQQKLETASTVEKNAVFAEILPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQ 1172
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + A+ +G ++K ++ V P ++S L+ + + G+ VI
Sbjct: 1173 RL--QGHVVEFAT-QMYGCRVIQKALESVP--PDTKIRIVSELRPYVTRCVKDQNGNHVI 1227
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + DFI A + L+ H GC + +++ + + IL +
Sbjct: 1228 QKCIECVQPSELDFIIAAFRGQVVSLSSHPYGCRVIQRILEHCLAEQTRPILEELHEGVD 1287
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +LRG LS K S V++K +
Sbjct: 1288 HLVKDQYGNYVIQHVLEHGLPGDKSRIIQSLRGRVSTLSAHKFASNVMEKAIANAQPSER 1347
Query: 240 -YIVEELL------------------NSDQILQVASDKYGNYVIQTAL-VETMRQDRLSV 279
+++E+L ++ ++ + D+Y NYV+Q L + M Q R
Sbjct: 1348 AILIDEILHPPTCLNLSGESVTTPSSSNSSLIDMMKDQYANYVVQRMLELAEMDQRR--- 1404
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
L++++Q LR YG +
Sbjct: 1405 --SLISRIQPIQNLLRKFNYGKH 1425
>gi|340373711|ref|XP_003385383.1| PREDICTED: pumilio homolog 2-like [Amphimedon queenslandica]
Length = 459
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 139/310 (44%), Gaps = 25/310 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL D +F + ++ L++ +G +V KF E I
Sbjct: 139 QHGSRFIQQKLEQCSDEDKDMVFSEILPASYSLITDVFGNYVIQKFFE------FGTIDQ 192
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLL-YHVMSALKRLFKFLMMTKPG 116
K T D+L S+ +G ++K I+ V PP L +++ L + + G
Sbjct: 193 KATLVDRLHGHVPSLSLHTYGCRVIQKAIESV---PPYLQAEIINELDGFVLKSIRDQNG 249
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ VI KC+E FI + +A H GC + +++ + +L I
Sbjct: 250 NHVIQKCIECVDPPLLTFIIVSFKGQVYDMATHPYGCRVIQRILEHCTAQQTDLLLKEIH 309
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
++A L GNYVVQHVL P I +RG V LS K S VV+K + +
Sbjct: 310 LHADQLIADNYGNYVVQHVLEKGRPEQKSRIIGVIRGRVVSLSQHKFASNVVEKCIVHAS 369
Query: 235 QNAVHYIVEELLNSDQ--ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
++ +++EL ++ + IL + D++ NYV+Q L D QR L+ +L+ H
Sbjct: 370 RHERAGLIDELCSAPEGAILTMTKDQFANYVVQKML------DIAEPSQRKMLIYRLRPH 423
Query: 291 LAALRVMKYG 300
L LR Y
Sbjct: 424 LPTLRKFTYA 433
>gi|20160612|dbj|BAB89558.1| putative pumilio domain-containing protein PPD1 [Oryza sativa
Japonica Group]
gi|125572616|gb|EAZ14131.1| hypothetical protein OsJ_04054 [Oryza sativa Japonica Group]
Length = 1048
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + D +F + LM+ +G +V KF E + +Q +
Sbjct: 727 GSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQ------RR 780
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQLF L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 781 ELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR----DQNGN 836
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLIS 176
VI KC+E FI + L+ H GC + +++ + ++I + I
Sbjct: 837 HVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEIL 896
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P I L G + +S K S VV+K L +
Sbjct: 897 QSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGG 956
Query: 237 AV--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ E+L + ++ LQ + D++GNYV+Q L Q R + ++++++ H
Sbjct: 957 PAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR----ELILSRVKVH 1012
Query: 291 LAALRVMKYG 300
L+AL+ YG
Sbjct: 1013 LSALKKYTYG 1022
>gi|26450884|dbj|BAC42549.1| putative RNA binding protein [Arabidopsis thaliana]
gi|28950903|gb|AAO63375.1| At3g10360 [Arabidopsis thaliana]
Length = 330
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 145/310 (46%), Gaps = 22/310 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + + LM+ +G +V KF E Q + ++
Sbjct: 5 GSRFIQQKLKTATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQV 64
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
T L S+ +G ++K ++VV L +K L +M + G+ V
Sbjct: 65 TGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKCVHDQNGNHV 116
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVN 178
I KC+E FI + L L+ H GC + ++++ ++ I+ I +
Sbjct: 117 IQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDS 176
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L++ + GNYV+QH++ P I L G V +S K S VV+K L +
Sbjct: 177 VCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPE 236
Query: 239 --HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D +GNYV+Q L ET L++ ++++++ HL
Sbjct: 237 ERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---ILSRIKVHLN 292
Query: 293 ALRVMKYGSN 302
AL+ YG +
Sbjct: 293 ALKRYTYGKH 302
>gi|115441005|ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa Japonica Group]
gi|215704672|dbj|BAG94300.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1060
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + D +F + LM+ +G +V KF E + +Q +
Sbjct: 739 GSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQ------RR 792
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQLF L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 793 ELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR----DQNGN 848
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLIS 176
VI KC+E FI + L+ H GC + +++ + ++I + I
Sbjct: 849 HVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQEIVMDEIL 908
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P I L G + +S K S VV+K L +
Sbjct: 909 QSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKFASNVVEKCLTFGG 968
Query: 237 AV--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ E+L + ++ LQ + D++GNYV+Q L Q R + ++++++ H
Sbjct: 969 PAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR----ELILSRVKVH 1024
Query: 291 LAALRVMKYG 300
L+AL+ YG
Sbjct: 1025 LSALKKYTYG 1034
>gi|328353330|emb|CCA39728.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 600
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 152/313 (48%), Gaps = 21/313 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ KL + +F + ELM +G ++ K + C + L++ +
Sbjct: 240 GCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCTNHEKDLLLEQS 299
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH---VMSALKRLFKFLMMTKPGSSV 119
LF +A +++ G+ +++K+I + + Y V +LK L+ G+ V
Sbjct: 300 A--PDLFSVA-LNQHGTRALQKIIDCLGTN----YQFSLVRDSLKNHVVELIQDLNGNHV 352
Query: 120 ILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
+ KC+ ++HK+ FI A H + ++ H+ GC L ++ + Q+ I N
Sbjct: 353 VQKCIN-KFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQQQLVQLGDEIIAN 411
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK---YQ 235
A L + + GNYVVQ++L++ + + + + + + LS+ K S V++K LK +
Sbjct: 412 AIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAPNR 471
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ + ++EE+L + + D+YGNYV+QTA+ + + RL+ ++ L ++
Sbjct: 472 SSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKF----RLIQTVKPMLPFIK 527
Query: 296 VMKYGSNKEIQKK 308
Y + IQ K
Sbjct: 528 STPYS--RRIQSK 538
>gi|254571113|ref|XP_002492666.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
gi|238032464|emb|CAY70487.1| Member of the PUF protein family, which is defined by the presence
of Pumilio homology domains [Komagataella pastoris
GS115]
Length = 588
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 152/313 (48%), Gaps = 21/313 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ KL + +F + ELM +G ++ K + C + L++ +
Sbjct: 228 GCRFLQRKLDENSTMYFPTIFGQICAHASELMVDPFGNYLVQKLLNYCTNHEKDLLLEQS 287
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH---VMSALKRLFKFLMMTKPGSSV 119
LF +A +++ G+ +++K+I + + Y V +LK L+ G+ V
Sbjct: 288 A--PDLFSVA-LNQHGTRALQKIIDCLGTN----YQFSLVRDSLKNHVVELIQDLNGNHV 340
Query: 120 ILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
+ KC+ ++HK+ FI A H + ++ H+ GC L ++ + Q+ I N
Sbjct: 341 VQKCIN-KFSHKDFQFIIDAICLHIVRISTHKHGCCVLQKCLNKCNQQQLVQLGDEIIAN 399
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK---YQ 235
A L + + GNYVVQ++L++ + + + + + + LS+ K S V++K LK +
Sbjct: 400 AIVLMKDQFGNYVVQYLLSMNNLPINEKLVYQILPSISMLSVQKFSSNVMEKCLKNAPNR 459
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ + ++EE+L + + D+YGNYV+QTA+ + + RL+ ++ L ++
Sbjct: 460 SSQNAMLEEILRPQNLNALIKDQYGNYVVQTAIDVADDEYKF----RLIQTVKPMLPFIK 515
Query: 296 VMKYGSNKEIQKK 308
Y + IQ K
Sbjct: 516 STPYS--RRIQSK 526
>gi|156389181|ref|XP_001634870.1| predicted protein [Nematostella vectensis]
gi|156221958|gb|EDO42807.1| predicted protein [Nematostella vectensis]
Length = 342
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 144/312 (46%), Gaps = 22/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E +E Q L
Sbjct: 33 QHGSRFIQQKLERATNGEKHLVFHEILPAAYSLMTDVFGNYVIQKFFEFGSEEQKHH--L 90
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH--VMSALKRLFKFLMMTKPGSS 118
+ + LA + +G ++K ++ + PP + H VM + K + + G+
Sbjct: 91 ASCIRGHVLPLA-LQMYGCRVIQKALECI---PPNVQHELVMELDGHVLK-CVKDQNGNH 145
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ KC+E H FI A L+ H GC + +++ + IL+ +
Sbjct: 146 VVQKCIECVDPHALQFIIDAFQGQVYALSTHPYGCRVIQRILEHCLTEQTLPILNEMHDQ 205
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
L + + GNYV+QHVL P I LRG+ + LS K S VV+K + + +
Sbjct: 206 TDRLVQDQYGNYVIQHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKCVSFASRT 265
Query: 239 H--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQH 290
+++E+ N++ + + D++ NYV+Q + V Q +L +H +++ H
Sbjct: 266 ERALLIDEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEPAQRKLLMH-----RIRPH 320
Query: 291 LAALRVMKYGSN 302
+A LR YG +
Sbjct: 321 VATLRKYTYGKH 332
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 98/249 (39%), Gaps = 32/249 (12%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L + +L + G + + Q G V K IE + L II
Sbjct: 107 GCRVIQKALECIPPNVQHELVMELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFII--D 164
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
FQ Q++ L S +G ++++++ + Q+ P+L + RL + + G+ VI
Sbjct: 165 AFQGQVYAL-STHPYGCRVIQRILEHCLTEQTLPILNEMHDQTDRLVQ----DQYGNYVI 219
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHE------QGCINLNNFIDNMKGSRRKQILHL 174
LE I + L L+ H+ + C++ SR ++ L +
Sbjct: 220 QHVLEHGTPEDRSKIVMQLRGNILPLSQHKFASNVVEKCVSF--------ASRTERALLI 271
Query: 175 ISVNAASLSRHRS---------GNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGS 225
V + H + NYVVQ ++++ +P + +R H L G
Sbjct: 272 DEVCNTNDGPHNALYTMMKDQFANYVVQKMIDVAEPAQRKLLMHRIRPHVATLRKYTYGK 331
Query: 226 FVVQKFLKY 234
++ K KY
Sbjct: 332 HILAKLEKY 340
>gi|326506354|dbj|BAJ86495.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 844
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 527 QHGSRFIQQKLENCTAEEKAAVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAA 586
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
K+ + S+ +G ++K ++V+ L + ++ L +M + G+
Sbjct: 587 KLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRCVRDQNGN 638
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLIS 176
VI KC+E F+ A L+ H GC + +++ G R Q I+ I
Sbjct: 639 HVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEIL 698
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+A L++ + GNYV QHV+ I L G V +S K S V++K ++ +
Sbjct: 699 QSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGD 758
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ IVE+ +D +L + D+Y NYV+Q ++ET ++ + LV++++ H
Sbjct: 759 IAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQ-KILETCNDEQREL---LVSRVKGH 814
Query: 291 LAALRVMKYG 300
L ALR YG
Sbjct: 815 LQALRKYTYG 824
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+L H S + +F G+ VI K E + + H + L+ GC
Sbjct: 552 VLPHASSLMTDVF--------GNYVIQKFFEHGTPEQRRDLAAKLAGHVVPLSLQMYGCR 603
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ ++ M+ ++ ++ + N R ++GN+V+Q + I + A RG
Sbjct: 604 VIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQ 663
Query: 215 YVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVET 271
LS+ G V+Q+ L++ + I++E+L S IL A D+YGNYV Q + +
Sbjct: 664 VASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL--AQDQYGNYVTQHVVEKG 721
Query: 272 MRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+R ++++KL + + K+ SN
Sbjct: 722 KSHERA----QIISKLAGQVVTMSQNKFASN 748
>gi|383848137|ref|XP_003699708.1| PREDICTED: pumilio homolog 2-like [Megachile rotundata]
Length = 1241
Score = 82.4 bits (202), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 890 QHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 949
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 950 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 1004
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 1005 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHAATD 1064
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 1065 QLIQDQYGNYVIQHVLEHGKPEDKTQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1124
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 1125 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 1177
Query: 294 LRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1178 LRKYTYGKHIIVKLEK 1193
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 882 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 941
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 942 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 999
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 1000 GNHVVQKCI 1008
>gi|449487299|ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + K+F + LM+ +G +V KF E SQ + ++
Sbjct: 672 GSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRKELAEQL 731
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K ++VV +++ L + + G+ VI K
Sbjct: 732 SGH---VLPLSLQMYGCRVIQKALEVVDSE--QQTQMVAELDGSIMKCVRDQNGNHVIQK 786
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNAAS 181
C+E + FI A L L+ H GC + +++ S +QI + I +
Sbjct: 787 CIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIMQSVCL 846
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L++ + GNYV+QHVL P I L G V +S K S VV+K L + +
Sbjct: 847 LAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASNVVEKCLTFGSPEERQ 906
Query: 241 -IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L S ++ LQ + D +GNYV+Q L E+ L + ++++++ HL +L+
Sbjct: 907 LLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLEL---ILSRIRVHLNSLK 962
Query: 296 VMKYG 300
YG
Sbjct: 963 RYTYG 967
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 45/230 (19%)
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
M + GS I + LE + + I+ + H L G + F ++ S+RK++
Sbjct: 668 MDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRKEL 727
Query: 172 LHLISVNAASLS------------------------------------RHRSGNYVVQHV 195
+S + LS R ++GN+V+Q
Sbjct: 728 AEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGNHVIQKC 787
Query: 196 LNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQIL 252
+ I I A G + LS G V+Q+ L++ N I++E++ S +
Sbjct: 788 IECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIMQS--VC 845
Query: 253 QVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+A D+YGNYVIQ L E + SV +++KL + + K+ SN
Sbjct: 846 LLAQDQYGNYVIQHVL-EFGKPHERSV---IISKLAGQIVKMSQQKFASN 891
>gi|45551850|ref|NP_731316.2| pumilio, isoform B [Drosophila melanogaster]
gi|45446432|gb|AAF54338.2| pumilio, isoform B [Drosophila melanogaster]
Length = 1185
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 775 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 834
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 835 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 889
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 890 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 949
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 950 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1005
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 1006 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 1061
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1062 ALRKYTYGKHINAKLEK 1078
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 772 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 827
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 828 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 887
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 888 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 947
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 948 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 995
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 767 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 826
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 827 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 884
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 885 GNHVVQKCI 893
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 849 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 906
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 907 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 961
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 962 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1021
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1022 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 1079
>gi|28573153|ref|NP_788604.1| pumilio, isoform E [Drosophila melanogaster]
gi|25013093|gb|AAN71644.1| SD07661p [Drosophila melanogaster]
gi|28381200|gb|AAO41523.1| pumilio, isoform E [Drosophila melanogaster]
Length = 935
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 525 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 584
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 585 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 639
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 640 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 699
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 700 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 755
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 756 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 811
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 812 ALRKYTYGKHINAKLEK 828
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 522 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 577
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 578 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 637
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 638 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 697
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 698 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 745
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 517 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 576
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 577 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 634
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 635 GNHVVQKCI 643
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 599 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 656
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 657 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 711
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 712 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 771
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 772 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 829
>gi|24645262|ref|NP_731314.1| pumilio, isoform A [Drosophila melanogaster]
gi|24645264|ref|NP_524285.2| pumilio, isoform C [Drosophila melanogaster]
gi|24645266|ref|NP_731315.1| pumilio, isoform D [Drosophila melanogaster]
gi|442618162|ref|NP_001262403.1| pumilio, isoform G [Drosophila melanogaster]
gi|34978383|sp|P25822.2|PUM_DROME RecName: Full=Maternal protein pumilio
gi|23170765|gb|AAF54340.2| pumilio, isoform A [Drosophila melanogaster]
gi|23170766|gb|AAN13409.1| pumilio, isoform C [Drosophila melanogaster]
gi|23170767|gb|AAN13410.1| pumilio, isoform D [Drosophila melanogaster]
gi|440217234|gb|AGB95785.1| pumilio, isoform G [Drosophila melanogaster]
Length = 1533
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 1123 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 1182
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 1183 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 1237
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1238 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 1297
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1353
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 1354 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 1409
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1410 ALRKYTYGKHINAKLEK 1426
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 1120 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 1175
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 1176 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 1235
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 1236 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 1295
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 1296 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 1343
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 1115 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 1174
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 1175 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 1232
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 1233 GNHVVQKCI 1241
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 1197 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 1254
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 1255 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 1309
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 1310 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1369
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1370 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 1427
>gi|195499330|ref|XP_002096903.1| GE24797 [Drosophila yakuba]
gi|194183004|gb|EDW96615.1| GE24797 [Drosophila yakuba]
Length = 935
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 525 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 584
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 585 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 639
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 640 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 699
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 700 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 755
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 756 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 811
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 812 ALRKYTYGKHINAKLEK 828
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 522 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 577
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 578 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 637
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 638 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 697
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 698 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 745
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
+ H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 515 VNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 574
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
P + + ++GH + L+L G V+QK L+ IV EL +L+ D
Sbjct: 575 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 632
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 633 QNGNHVVQKCI 643
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 599 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 656
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 657 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 711
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 712 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 771
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 772 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 829
>gi|194903420|ref|XP_001980865.1| GG17394 [Drosophila erecta]
gi|190652568|gb|EDV49823.1| GG17394 [Drosophila erecta]
Length = 937
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 527 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 586
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 587 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 641
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 642 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 701
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 702 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 757
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 758 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 813
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 814 ALRKYTYGKHINAKLEK 830
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 524 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 579
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 580 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 639
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 640 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 699
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 700 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 747
Score = 43.1 bits (100), Expect = 0.14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
+ H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 517 VNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFG 576
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
P + + ++GH + L+L G V+QK L+ IV EL +L+ D
Sbjct: 577 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 634
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 635 QNGNHVVQKCI 645
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 601 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 658
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 659 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 713
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 714 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 773
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 774 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 831
>gi|158191|gb|AAB59189.1| pumilio protein [Drosophila melanogaster]
gi|384208|prf||1905306A pumilio gene
Length = 1533
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 77/317 (24%), Positives = 148/317 (46%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 1123 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 1182
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 1183 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 1237
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1238 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 1297
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1353
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 1354 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 1409
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1410 ALRKYTYGKHINAKLEK 1426
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 1120 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 1175
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 1176 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 1235
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 1236 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 1295
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 1296 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 1343
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 1115 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 1174
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 1175 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 1232
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 1233 GNHVVQKCI 1241
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 49/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 1197 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 1254
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 1255 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 1309
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 1310 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1369
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R H L G + K KY
Sbjct: 1370 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRPHMAALRKYTYGKHINAKLEKY 1427
>gi|449449485|ref|XP_004142495.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 996
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + K+F + LM+ +G +V KF E SQ + ++
Sbjct: 672 GSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRKELAEQL 731
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K ++VV +++ L + + G+ VI K
Sbjct: 732 SGH---VLPLSLQMYGCRVIQKALEVVDSE--QQTQMVAELDGSIMKCVRDQNGNHVIQK 786
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNAAS 181
C+E + FI A L L+ H GC + +++ S +QI + I +
Sbjct: 787 CIECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIMQSVCL 846
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L++ + GNYV+QHVL P I L G V +S K S VV+K L + +
Sbjct: 847 LAQDQYGNYVIQHVLEFGKPHERSVIISKLAGQIVKMSQQKFASNVVEKCLTFGSPEERQ 906
Query: 241 -IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L S ++ LQ + D +GNYV+Q L E+ L + ++++++ HL +L+
Sbjct: 907 LLVNEILGSTDENEPLQAMMKDPFGNYVVQKVL-ESCDDHSLEL---ILSRIRVHLNSLK 962
Query: 296 VMKYG 300
YG
Sbjct: 963 RYTYG 967
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 92/230 (40%), Gaps = 45/230 (19%)
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
M + GS I + LE + + I+ + H L G + F ++ S+RK++
Sbjct: 668 MDQYGSRFIQQKLETANVEEKTKIFPEIIPHARTLMTDVFGNYVIQKFFEHGTASQRKEL 727
Query: 172 LHLISVNAASLS------------------------------------RHRSGNYVVQHV 195
+S + LS R ++GN+V+Q
Sbjct: 728 AEQLSGHVLPLSLQMYGCRVIQKALEVVDSEQQTQMVAELDGSIMKCVRDQNGNHVIQKC 787
Query: 196 LNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQIL 252
+ I I A G + LS G V+Q+ L++ N I++E++ S +
Sbjct: 788 IECIPQERIQFIISAFYGQVLALSTHPYGCRVIQRVLEHCDDSNTQQIIMDEIMQS--VC 845
Query: 253 QVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+A D+YGNYVIQ L E + SV +++KL + + K+ SN
Sbjct: 846 LLAQDQYGNYVIQHVL-EFGKPHERSV---IISKLAGQIVKMSQQKFASN 891
>gi|253741511|gb|EES98380.1| Pumilio-family RNA-binding protein, putative [Giardia intestinalis
ATCC 50581]
Length = 652
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 17/272 (6%)
Query: 30 TFELMSG----QYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 85
T LM G G + F K IE + +Q I+L I QD LF + + G+ S++KL
Sbjct: 361 TPSLMEGLLIHPAGNYCFQKIIEGSDATQRLRILLLI--QDSLFDICH-NLHGTRSIQKL 417
Query: 86 IKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHC 143
++ V+ + + + R+ K +M G+ + +C+E FIY +
Sbjct: 418 LERVSLDEEKAIFAQQLGTGDRIIKLIMDIN-GNHCVQRCIEAFSPKDCAFIYSQIVREL 476
Query: 144 LYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL-----NL 198
+ ++ H+ GC + +D ++R QI+ I + L R GNYV Q+ L L
Sbjct: 477 VLVSTHQHGCCIIQRCLDLCSEAQRVQIVTAIKDHVMELIVDRFGNYVFQYSLEKASNGL 536
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVAS 256
P D + + G L K S ++K LKY + I E ++ S L +A
Sbjct: 537 CGPITTDDLIRPVLGQEAFLVNQKFSSHAIEKCLKYGSKKMRALITENVMASGSFLSLAM 596
Query: 257 DKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
DK+GNYVIQ A + + + + QR++ +
Sbjct: 597 DKFGNYVIQKAFCDATDEQKKIISQRVLASPE 628
>gi|297803524|ref|XP_002869646.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
gi|297315482|gb|EFH45905.1| hypothetical protein ARALYDRAFT_913980 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +LM+ +G +V KF E N +Q +
Sbjct: 542 QHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSAQRKELAD 601
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 602 QLMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVI 656
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLI 175
KC+E + F+ A L+ H GC + ++ + ++IL +
Sbjct: 657 QKCIENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESV 716
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+Y
Sbjct: 717 CV----LSKDQYGNYVTQHVLEKGTSEERERIVRKLSGHIVQLSLHKFASNVIEKCLEYG 772
Query: 236 NAVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+ I++E+ D+ +L + D+YGNYV+Q + ET D+ + L ++++
Sbjct: 773 GRIERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQ-KIFETCTADQRAT---LFSRVRM 828
Query: 290 HLAALRVMKYG 300
H +AL+ YG
Sbjct: 829 HASALKKYTYG 839
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + +D ++ +R ++ + R ++GN+V+Q + + + A
Sbjct: 616 GCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADRVGFMLHAF 675
Query: 212 RGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
RG LS+ G V+Q+ L+ + + +I EE+L S + ++ D+YGNYV Q L
Sbjct: 676 RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 733
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ ++R +R+V KL H+ L + K+ SN
Sbjct: 734 EKGTSEER----ERIVRKLSGHIVQLSLHKFASN 763
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++N K + + I +A L GNYV+Q +
Sbjct: 534 HIVEFSADQHGSRFIQQKLENCKLEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNS 593
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ L G V LSL G V+QK L + EL Q+++ D+
Sbjct: 594 AQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRLAREL--DGQVMRCVRDQN 651
Query: 260 GNYVIQTALVETMRQDR----LSVHQRLVTKLQQHLAALRVMK 298
GN+VIQ +E + DR L + V+ L H RV++
Sbjct: 652 GNHVIQKC-IENIPADRVGFMLHAFRGQVSSLSMHPYGCRVIQ 693
>gi|380029756|ref|XP_003698531.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Apis florea]
Length = 1240
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 889 QHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 948
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 949 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 1003
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 1004 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHAATD 1063
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 1124 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 1176
Query: 294 LRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1177 LRKYTYGKHIIVKLEK 1192
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 998
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 999 GNHVVQKCI 1007
>gi|350400877|ref|XP_003485990.1| PREDICTED: pumilio homolog 1-like [Bombus impatiens]
Length = 1240
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 889 QHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 948
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 949 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 1003
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 1004 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHAATD 1063
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 1124 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 1176
Query: 294 LRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1177 LRKYTYGKHIIVKLEK 1192
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 998
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 999 GNHVVQKCI 1007
>gi|340719709|ref|XP_003398290.1| PREDICTED: pumilio homolog 1-like [Bombus terrestris]
Length = 1239
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 888 QHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 947
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 948 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 1002
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 1003 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHAATD 1062
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 1063 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1122
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 1123 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 1175
Query: 294 LRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1176 LRKYTYGKHIIVKLEK 1191
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 880 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 939
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 940 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 997
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 998 GNHVVQKCI 1006
>gi|328786740|ref|XP_391849.4| PREDICTED: pumilio homolog 2 [Apis mellifera]
Length = 1240
Score = 82.0 bits (201), Expect = 3e-13, Method: Composition-based stats.
Identities = 75/316 (23%), Positives = 145/316 (45%), Gaps = 19/316 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 889 QHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 948
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 949 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 1003
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 1004 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTPEQTQGILQELHAATD 1063
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 1064 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLTLSQHKFASNVVEKCVTHATRQER 1123
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 1124 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 1176
Query: 294 LRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1177 LRKYTYGKHIIVKLEK 1192
Score = 45.1 bits (105), Expect = 0.040, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 881 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILTSAYSLMTDVFGNYVIQKFFEFGTP 940
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 941 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 998
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 999 GNHVVQKCI 1007
>gi|413924047|gb|AFW63979.1| hypothetical protein ZEAMMB73_492361 [Zea mays]
Length = 1002
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 145/307 (47%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + LM+ +G +V KF E E+Q +
Sbjct: 683 GSRFIQQKLETASTEQKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTETQTKQLA--- 739
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q + + ++ R + + G+ VI
Sbjct: 740 TLLKGFVLQLSLQMYGCRVIQKALEVVEVEQQTQMALELDGSIMRCVR----DQNGNHVI 795
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVNA 179
KC+E + FI A H + L+ H GC + +++ S + ++ I +
Sbjct: 796 QKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRILEHCDDESTQNAMMEEIMQSV 855
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+L+ + GNYV+QHVL P I L G V +S K S VV+K L + +
Sbjct: 856 VTLTEDQYGNYVIQHVLQYGKPEERSTIIAQLAGQIVKMSQQKFASNVVEKCLTFGSPEQ 915
Query: 240 Y--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ E+L + ++ LQ + D++ NYV+Q L Q+R + ++++++ HL A
Sbjct: 916 RQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNR----ELILSRIKVHLNA 971
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 972 LKRYTYG 978
>gi|347836748|emb|CCD51320.1| similar to pumilio domain-containing protein [Botryotinia
fuckeliana]
Length = 964
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S ++LF + +LM+ +G +V K E N+ Q +L
Sbjct: 571 QHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQVQKR--VL 628
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ V Q L+ + + + + K + G+
Sbjct: 629 AEQMKNHVMEL-SMQMYGCRVVQKALEHVLADQQAELVKELEADVLKCVK----DQNGNH 683
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI +A LA H GC + ++ + ++++L +
Sbjct: 684 VVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRDQERVLEELHQC 743
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 744 ASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNVVEKSIQFGTDE 803
Query: 237 AVHYIVEEL--LNSDQI--LQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
H IV L L+SD LQ+ D+YGNYVIQ L + +R V L+ L
Sbjct: 804 QRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAER----NAFVEDLKPQL 859
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 860 LALKKYNYG 868
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
SV+L+ + + + +H + + + G + ++ ++Q+ I
Sbjct: 539 SVLLEEFRSNAKSNKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQP 598
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA L GNYV+Q + + + ++ H ++LS+ G VVQK L++ A
Sbjct: 599 NALQLMTDVFGNYVIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLA 658
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
+V+EL +L+ D+ GN+V+Q A+
Sbjct: 659 DQQAELVKEL--EADVLKCVKDQNGNHVVQKAI 689
>gi|154298974|ref|XP_001549908.1| hypothetical protein BC1G_11734 [Botryotinia fuckeliana B05.10]
Length = 964
Score = 81.6 bits (200), Expect = 4e-13, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S ++LF + +LM+ +G +V K E N+ Q +L
Sbjct: 571 QHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQVQKR--VL 628
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ V Q L+ + + + + K + G+
Sbjct: 629 AEQMKNHVMEL-SMQMYGCRVVQKALEHVLADQQAELVKELEADVLKCVK----DQNGNH 683
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI +A LA H GC + ++ + ++++L +
Sbjct: 684 VVQKAIERVPTEHIQFIIEAFRGQVHVLATHPYGCRVIQRILEYCQPRDQERVLEELHQC 743
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 744 ASNLITDQYGNYVTQHVIQHGKPEDRAKIVKIVTAQLLTLSKHKFASNVVEKSIQFGTDE 803
Query: 237 AVHYIVEEL--LNSDQI--LQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
H IV L L+SD LQ+ D+YGNYVIQ L + +R V L+ L
Sbjct: 804 QRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAER----NAFVEDLKPQL 859
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 860 LALKKYNYG 868
Score = 45.8 bits (107), Expect = 0.025, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
SV+L+ + + + +H + + + G + ++ ++Q+ I
Sbjct: 539 SVLLEEFRSNAKSNKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQP 598
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA L GNYV+Q + + + ++ H ++LS+ G VVQK L++ A
Sbjct: 599 NALQLMTDVFGNYVIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLA 658
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
+V+EL +L+ D+ GN+V+Q A+
Sbjct: 659 DQQAELVKEL--EADVLKCVKDQNGNHVVQKAI 689
>gi|255566432|ref|XP_002524201.1| pumilio, putative [Ricinus communis]
gi|223536478|gb|EEF38125.1| pumilio, putative [Ricinus communis]
Length = 999
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 148/307 (48%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 677 GSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKFFEHGSAAQIRELADQL 736
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K I+VV Q ++ + + R + + G+ VI
Sbjct: 737 TGH---VLTLSLQMYGCRVIQKAIEVVELDQQTKMVAELDGHIMRCVR----DQNGNHVI 789
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
KC+E FI + + L+ H GC + +++ ++ ++I+ I +
Sbjct: 790 QKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAKTQRIMMDEILQSV 849
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYVVQHVL P +I L G V +S K S V++K L +
Sbjct: 850 LMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNVIEKCLTFGTPAE 909
Query: 239 -HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V E+L + ++ LQV D++ NYV+Q L ET +L + ++ +++ HL A
Sbjct: 910 RQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL---ILNRIKVHLNA 965
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 966 LKKYTYG 972
>gi|326521732|dbj|BAK00442.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 824
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 142/310 (45%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 507 QHGSRFIQQKLENCTAEEKAVVFAEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLAA 566
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
K+ + S+ +G ++K ++V+ L + ++ L +M + G+
Sbjct: 567 KLAGH---VVPLSLQMYGCRVIQKALEVME-----LDQKIDLVRELDGNIMRCVRDQNGN 618
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLIS 176
VI KC+E F+ A L+ H GC + +++ G R Q I+ I
Sbjct: 619 HVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEIL 678
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+A L++ + GNYV QHV+ I L G V +S K S V++K ++ +
Sbjct: 679 QSACILAQDQYGNYVTQHVVEKGKSHERAQIISKLAGQVVTMSQNKFASNVIEKCFQHGD 738
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ IVE+ +D +L + D+Y NYV+Q ++ET ++ + LV++++ H
Sbjct: 739 IAERDLLIREIVEQTDGNDTLLAMMKDQYANYVVQ-KILETCNDEQREL---LVSRVKGH 794
Query: 291 LAALRVMKYG 300
L ALR YG
Sbjct: 795 LQALRKYTYG 804
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + L+ GC + ++ M+ ++ ++ + N R ++GN+V+Q +
Sbjct: 571 HVVPLSLQMYGCRVIQKALEVMELDQKIDLVRELDGNIMRCVRDQNGNHVIQKCIECVPT 630
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDK 258
I + A RG LS+ G V+Q+ L++ + I++E+L S IL A D+
Sbjct: 631 EHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSRGQCIIDEILQSACIL--AQDQ 688
Query: 259 YGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
YGNYV Q + + +R ++++KL + + K+ SN
Sbjct: 689 YGNYVTQHVVEKGKSHERA----QIISKLAGQVVTMSQNKFASN 728
>gi|384485031|gb|EIE77211.1| hypothetical protein RO3G_01915 [Rhizopus delemar RA 99-880]
Length = 649
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 143/313 (45%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + S +F + +LM+ +G +V KF E +++Q ++
Sbjct: 338 QHGSRFIQQKLETASSEEKQMVFEEILPNALQLMTDVFGNYVIQKFFEHGSQAQKTVLAK 397
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM----TKPG 116
+ + + S+ +G V+K ++ V L +AL R ++ + G
Sbjct: 398 HM---ETHVVSLSLQMYGCRVVQKALEYV------LTDQQAALVRELDGCVLKCVKDQNG 448
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ V+ K +E H FI +LA H GC + ++ + +L ++
Sbjct: 449 NHVVQKAIERVPAHHVQFIIDILHGQVYHLATHPYGCRVIQRVFEHCPKEQTIHLLEELN 508
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
N + L + + GNYV+QH+L + + ++GH + LS K S VV+K + Y N
Sbjct: 509 RNTSQLVQDQYGNYVIQHILEHGEAKDKALVISKVKGHVLQLSKHKFASNVVEKCVAYGN 568
Query: 237 A--VHYIVEELL-----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKL 287
++EE+L + ++ + D+Y NYV+Q L D + QR L+ K+
Sbjct: 569 PQDRQELIEEVLLTRPDGTYPLMSMMKDQYANYVVQKML------DVVDGSQRDLLIAKI 622
Query: 288 QQHLAALRVMKYG 300
+ HL L+ YG
Sbjct: 623 KPHLQGLKKYTYG 635
>gi|320581830|gb|EFW96049.1| Member of the PUF protein family [Ogataea parapolymorpha DL-1]
Length = 548
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 26/315 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ+K+ + +F V + ELM +G ++ K I + + +L LI+ I
Sbjct: 215 GCRFLQKKIDEDFGKNYPLIFKEVHQHSIELMMDPFGNYLIQKIILNASAEELKLILTNI 274
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP-------LLYHVMSALKRLFKFLMMTKP 115
L ++ G+ + +KLI ++ + L HV++ ++ L
Sbjct: 275 A---PLIHTICRNQHGTRACQKLIDCLSTTGHYRLLQNCLTPHVVNLIQDLN-------- 323
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ KC+ N FI + + + ++ H+ GC L ++ + Q+ I
Sbjct: 324 GNHVVQKCIAKFQNDDLQFIIDSICNNIVKISTHKHGCCVLQKLLNRCNHQQVLQLGSEI 383
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--K 233
N+ L + + GNYVVQ +++L+ P L + + DLS K S VV+K L K
Sbjct: 384 VANSYQLMQDQFGNYVVQFLISLDIPSLNSELVKIMVPFINDLSTQKFSSNVVEKCLKIK 443
Query: 234 YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+ + +V+ LL + + D++GNYV+QTA+ + ++L R ++ L
Sbjct: 444 FDQGFNPLVDALLQPQVLGVLVKDQFGNYVVQTAMDNSSPDNKL----RFALAIKPMLPM 499
Query: 294 LRVMKYGSNKEIQKK 308
+R +G K I K
Sbjct: 500 VRHASFG--KRIHNK 512
>gi|79609613|ref|NP_974618.2| pumilio 6 protein [Arabidopsis thaliana]
gi|332659728|gb|AEE85128.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 855
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 24/310 (7%)
Query: 2 EGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
E S+++Q+KL + +F + +LM+ +G +V KF E N +Q + +
Sbjct: 539 EFSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQ 598
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
+ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 599 LMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVIQ 653
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLIS 176
KC+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 654 KCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 237 AVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V I++E+ D+ +L + D+YGNYV+Q RL+ L ++++ H
Sbjct: 770 RVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRMH 825
Query: 291 LAALRVMKYG 300
+AL+ YG
Sbjct: 826 ASALKKYTYG 835
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + +D ++ +R ++ + R ++GN+V+Q + + + +A
Sbjct: 612 GCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAF 671
Query: 212 RGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
RG LS+ G V+Q+ L+ + + +I EE+L S + ++ D+YGNYV Q L
Sbjct: 672 RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 729
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ ++R +R+ KL H+ L + K+ SN
Sbjct: 730 EKGTSEER----ERIGRKLSGHIVQLSLHKFASN 759
>gi|356557841|ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 147/308 (47%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 733 GSRFIQQKLETATTEEKNMVYQEIMPQALALMTDVFGNYVVQKFFEHGLASQRRELANKL 792
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
F+ L L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 793 -FEHVLTL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNIMRCVRDQNGNHV 844
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E +FI + + L+ H GC + +++ K +Q ++ I
Sbjct: 845 IQKCIECVPEDAINFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 904
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P AI L G V +S K S VV+K L +
Sbjct: 905 VSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPS 964
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L S ++ LQ + D++ NYV+Q L Q R + ++++++ HL
Sbjct: 965 ERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLN 1020
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1021 ALKKYTYG 1028
>gi|224106433|ref|XP_002314164.1| predicted protein [Populus trichocarpa]
gi|222850572|gb|EEE88119.1| predicted protein [Populus trichocarpa]
Length = 998
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 687 GSRFIQQKLETATTDEKNMVYQEIMPQALALMTDVFGNYVIQKFFEHGLPSQRRELAGKL 746
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L H + ++ L +M + G+ V
Sbjct: 747 LGH---VLTLSLQMYGCRVIQKAIEVVD-----LEHKIKMVEELDGHVMRCVRDQNGNHV 798
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVN 178
I KC+E FI + + L+ H GC + +++ K ++ + +++ I
Sbjct: 799 IQKCIECIPEDNIQFIVTTFFDQVVILSTHPYGCRVIQRILEHCKDAKTQSKVMDEILGA 858
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL AI L G V +S K S VV+K L +
Sbjct: 859 VSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVEKCLTFSGPS 918
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 919 ERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLT 974
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 975 ALKKYTYG 982
>gi|347970897|ref|XP_003436658.1| AGAP003914-PB [Anopheles gambiae str. PEST]
gi|333469539|gb|EGK97332.1| AGAP003914-PB [Anopheles gambiae str. PEST]
Length = 1378
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 75/313 (23%), Positives = 138/313 (44%), Gaps = 27/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +F + G + LM+ +G +V KF E + Q +
Sbjct: 945 QHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPEQKQALAQ 1004
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
++ L ++ +G ++K ++ + L HV+ +K +
Sbjct: 1005 QVKGH---VLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVK--------DQ 1053
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 1054 NGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILAE 1113
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ N L + + GNYV+QHVL P A+ ++RG + LS K S VV+K + +
Sbjct: 1114 LHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVTH 1173
Query: 235 QNAVH--YIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQ 289
++EE+ N + + D+Y NYV+Q + V Q ++ +H K++
Sbjct: 1174 ATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLH-----KIRP 1228
Query: 290 HLAALRVMKYGSN 302
H+ +L+ YG +
Sbjct: 1229 HMNSLKKYTYGKH 1241
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLYH-VMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + ++ L+++ ++ A L M G+ VI K E
Sbjct: 942 SQDQHGSRFIQQKLERAISVEKQLVFNEILGAAYSL----MTDVFGNYVIQKFFEFGSPE 997
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + Q H L LA GC + ++++ ++++I+ + + + ++GN+
Sbjct: 998 QKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQNGNH 1057
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLN 247
VVQ + DP + I A R LS G V+Q+ L++ + + E N
Sbjct: 1058 VVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILAELHAN 1117
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++ ++Q D+YGNYVIQ L +D+ + L+ ++ + L K+ SN
Sbjct: 1118 TEHLIQ---DQYGNYVIQHVLEHGKPEDKSA----LIASVRGKVLILSQHKFASN 1165
Score = 37.4 bits (85), Expect = 8.5, Method: Composition-based stats.
Identities = 47/238 (19%), Positives = 100/238 (42%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S + ++ + G + + Q G V K IE + L II
Sbjct: 1019 GCRVIQKALESIPAEQQQEIVRELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--D 1076
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F++Q++ L S +G ++++++ Q+ P+L + + + L + + G+ VI
Sbjct: 1077 AFRNQVYSL-STHPYGCRVIQRILEHCTPEQTAPILAELHANTEHLIQ----DQYGNYVI 1131
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI-SVNA 179
LE + + L L+ H+ + + + + R ++ + S N
Sbjct: 1132 QHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVTHATRAERALLIEEVCSFND 1191
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ L + + NYVVQ ++++ +P + +R H L G ++ K K+
Sbjct: 1192 SGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLHKIRPHMNSLKKYTYGKHIIAKLDKF 1249
>gi|261196167|ref|XP_002624487.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
gi|239587620|gb|EEQ70263.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis SLH14081]
Length = 932
Score = 81.3 bits (199), Expect = 6e-13, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + + +LM+ +G +V K E N+SQ ++
Sbjct: 526 QHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 585
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 586 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVNDQNGN 637
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A A H GC + +++ K R+ IL +
Sbjct: 638 HVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAELHA 697
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
AASL GNYV+QHV+ + I + + S K S VV+K +++ +
Sbjct: 698 CAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGAE 757
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
I+ +L + +L + D+YGNYV+QT L E +R + LV +++
Sbjct: 758 GQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER----EALVKQIELQ 813
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 814 LPELKKTNYG 823
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 129 NHKNDFIYQAA--LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N KN Y+ H + + + G + + +++ + Q+ I N+ L
Sbjct: 503 NSKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDV 562
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 563 FGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 622
Query: 245 LLNSDQILQVASDKYGNYVIQTAL 268
L N +L+ +D+ GN+VIQ A+
Sbjct: 623 LEN--HVLKCVNDQNGNHVIQKAV 644
>gi|255544506|ref|XP_002513314.1| pumilio, putative [Ricinus communis]
gi|223547222|gb|EEF48717.1| pumilio, putative [Ricinus communis]
Length = 1004
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +LM+ +G +V KF E + Q +
Sbjct: 687 QHGSRFIQQKLEHCSFEEKVSVFKEVLPHASKLMTDVFGNYVIQKFFEHGSPDQRKELAD 746
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K++ Q L S+ +G ++K ++V+ Q L+ + + R + + G+
Sbjct: 747 KLSGQ---MLQLSLQMYGCRVIQKALEVIELDQKTQLVQELDGHVLRC----VHDQNGNH 799
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLI 175
VI KC+E P+ N +FI A LA H GC + +++ + Q I+ I
Sbjct: 800 VIQKCIECVPTMN--IEFIISAFQGQVAALATHPYGCRVIQRVLEHCSDDLQSQCIVDEI 857
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+A L++ + GNYV QHVL P+ I L G V +S K S V++K L++
Sbjct: 858 LESAYLLAQDQYGNYVTQHVLERGKPYERSQIISKLTGKIVQMSQHKYASNVIEKCLEHG 917
Query: 236 NAVHY--IVEELLN----SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+ + ++EE++ SDQ L + D++ NYV+Q L + + R + L+++++
Sbjct: 918 SPIEQELLIEEIIGQSEESDQFLTMMKDQFANYVVQKILEISNDKQR----EILLSRIRI 973
Query: 290 HLAALRVMKYG 300
HL AL+ YG
Sbjct: 974 HLHALKKYTYG 984
>gi|357472855|ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein [Medicago truncatula]
Length = 1025
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 704 GSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLAPQRRELANKL 763
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 764 IGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVKELDGNIMRCVRDQNGNHV 815
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E DFI + + L+ H GC + +++ + +Q ++ I
Sbjct: 816 IQKCIECVPEEAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCESPATQQKVMDEILGA 875
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 876 VSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGKIVQMSQQKFASNVVEKCLTFSGPA 935
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
+V E+L + ++ LQ + D++ NYV+Q L + HQR ++++++ H
Sbjct: 936 ERQILVSEMLGTTDENEPLQAMMKDQFANYVVQKVL------ETCDDHQRELILSRIKVH 989
Query: 291 LAALRVMKYG 300
L AL+ YG
Sbjct: 990 LNALKKYTYG 999
>gi|297795139|ref|XP_002865454.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311289|gb|EFH41713.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 505
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 14/310 (4%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ L E + G +D +F + ELM YG+ V I C Q+ I+ +T
Sbjct: 201 SKKLLETIYQGTKETIDTIFDRIIVHICELMVDPYGKDVVMLLIGKCCSEQIIQIVDLVT 260
Query: 64 FQDQL-FLLASVDKFGSSSVKKLIKVV-AQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
QD F+ D G++++++L+ + ++ + +M + + L + +IL
Sbjct: 261 -QDMFQFVNICFDLRGTAAIQELLDSIHKRANDQIPRIMDLINSVGLQLAKSSNARFLIL 319
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR---RKQILHLISVN 178
C ++ + +HC ++ + GC +D + R++++ + +
Sbjct: 320 SCFRLFPLSHCRYLLEVVAQHCYEISIDQNGCCLYQQCLDKNRVPNPEIRQRLISEVISH 379
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA- 237
A L + GNYVVQ+++ L + +I+A+ L G+Y L+ K GS VVQK L+ +
Sbjct: 380 ALRLCLNCYGNYVVQYIVELNNQHVINALVRQLIGNYAHLARNKYGSHVVQKLLRLRGVD 439
Query: 238 VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
IV +LL+ QI + D +GNYVIQTA + + V L ++ ++ +R
Sbjct: 440 TRLIVVDLLS--QIDTLLLDPFGNYVIQTAWFVS----KDDVRHMLRYHIELNIRLMRCN 493
Query: 298 KYGSNKEIQK 307
K+G NK ++K
Sbjct: 494 KFG-NKLLEK 502
>gi|239614575|gb|EEQ91562.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ER-3]
Length = 932
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + + +LM+ +G +V K E N+SQ ++
Sbjct: 526 QHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 585
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 586 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVNDQNGN 637
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A A H GC + +++ K R+ IL +
Sbjct: 638 HVIQKAVERVPTVHIRFIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAELHA 697
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
AASL GNYV+QHV+ + I + + S K S VV+K +++ +
Sbjct: 698 CAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFGAE 757
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
I+ +L + +L + D+YGNYV+QT L E +R + LV +++
Sbjct: 758 GQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER----EALVKQIELQ 813
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 814 LPELKKTNYG 823
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 129 NHKNDFIYQAA--LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N KN Y+ H + + + G + + +++ + Q+ I N+ L
Sbjct: 503 NSKNSKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDV 562
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 563 FGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 622
Query: 245 LLNSDQILQVASDKYGNYVIQTAL 268
L N +L+ +D+ GN+VIQ A+
Sbjct: 623 LEN--HVLKCVNDQNGNHVIQKAV 644
>gi|156064143|ref|XP_001597993.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980]
gi|154690941|gb|EDN90679.1| hypothetical protein SS1G_00079 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 964
Score = 80.9 bits (198), Expect = 6e-13, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S ++LF + +LM+ +G +V K E N+ Q +L
Sbjct: 571 QHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQVQKR--VL 628
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ V Q L+ + + + + K + G+
Sbjct: 629 AEQMKNHVMEL-SMQMYGCRVVQKALEHVLADQQAELVKELEADVLKCVK----DQNGNH 683
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI +A LA H GC + ++ + ++++L +
Sbjct: 684 VVQKAIERVPTEHIQFIIEAFRGQVHILATHPYGCRVIQRILEYCQPRDQERVLEELHQC 743
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A++L + GNYV QHV+ P I + + LS K S VV+K +++
Sbjct: 744 ASNLITDQYGNYVTQHVIQHGKPEDRAKIIKIVTAQLLTLSKHKFASNVVEKSIQFGTDE 803
Query: 237 AVHYIVEEL--LNSDQI--LQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
H IV L L+SD LQ+ D+YGNYVIQ L + +R + V L+ L
Sbjct: 804 QRHTIVSLLTALHSDGTSPLQLMMKDQYGNYVIQKLLGQLKGAERAA----FVEDLKPQL 859
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 860 LALKKYNYG 868
Score = 45.4 bits (106), Expect = 0.031, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
SV+L+ + + + +H + + + G + ++ ++Q+ I
Sbjct: 539 SVLLEEFRSNAKSNKRYELKDIYQHVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQP 598
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA L GNYV+Q + + + ++ H ++LS+ G VVQK L++ A
Sbjct: 599 NALQLMTDVFGNYVIQKLFEHGNQVQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLA 658
Query: 238 VHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
+V+EL +L+ D+ GN+V+Q A+
Sbjct: 659 DQQAELVKEL--EADVLKCVKDQNGNHVVQKAI 689
>gi|79325269|ref|NP_001031720.1| pumilio 6 protein [Arabidopsis thaliana]
gi|332659729|gb|AEE85129.1| pumilio 6 protein [Arabidopsis thaliana]
Length = 858
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 24/310 (7%)
Query: 2 EGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
E S+++Q+KL + +F + +LM+ +G +V KF E N +Q + +
Sbjct: 539 EFSRFIQQKLENCKPEEKAAVFREILPHACKLMTDVFGNYVIQKFFEYGNSTQRKELADQ 598
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
+ Q + S+ +G ++K + V+ P + L + + G+ VI
Sbjct: 599 LMGQ---IVPLSLQMYGCRVIQKALDVI--EPDQRVRLARELDGQVMRCVRDQNGNHVIQ 653
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR-----KQILHLIS 176
KC+E K F+ A L+ H GC + ++ + ++IL +
Sbjct: 654 KCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILESVC 713
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
V LS+ + GNYV QHVL + I L GH V LSL K S V++K L+Y
Sbjct: 714 V----LSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGG 769
Query: 237 AVHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V I++E+ D+ +L + D+YGNYV+Q RL+ L ++++ H
Sbjct: 770 RVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTADQRLT----LFSRVRMH 825
Query: 291 LAALRVMKYG 300
+AL+ YG
Sbjct: 826 ASALKKYTYG 835
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + +D ++ +R ++ + R ++GN+V+Q + + + +A
Sbjct: 612 GCRVIQKALDVIEPDQRVRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAF 671
Query: 212 RGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL 268
RG LS+ G V+Q+ L+ + + +I EE+L S + ++ D+YGNYV Q L
Sbjct: 672 RGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEILES--VCVLSKDQYGNYVTQHVL 729
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ ++R +R+ KL H+ L + K+ SN
Sbjct: 730 EKGTSEER----ERIGRKLSGHIVQLSLHKFASN 759
>gi|320586016|gb|EFW98695.1| pumilio family mRNA-binding protein [Grosmannia clavigera kw1407]
Length = 953
Score = 80.9 bits (198), Expect = 7e-13, Method: Composition-based stats.
Identities = 85/304 (27%), Positives = 135/304 (44%), Gaps = 20/304 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S + +F +S T LM +G +V KF E + SQL L
Sbjct: 550 QHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFE--HGSQLQKKYL 607
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ L S + V+K ++ +V Q L + + R+ K G+
Sbjct: 608 AEQMRGKIVDL-STQTYACRVVQKALQHILVDQQVILAKELEIDVIRVVK----DPNGNH 662
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E +FI A L+ H GC + +++ ++ IL + N
Sbjct: 663 VIQKVVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQRMLEHGLEEDKEMILSELHDN 722
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L + GNYV QHV+ P + + + V +S K S VV+K +++ A
Sbjct: 723 AMDLINDQYGNYVAQHVIQFGKPRDREKVISRVLNQLVTMSNNKFASNVVEKCIEFGTAA 782
Query: 239 --HYIVEEL--LNSDQ---ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
I EEL L D + Q+ D+YGNYVIQ L +Q + HQ L L
Sbjct: 783 DRQRIREELSRLGPDGQPILQQMIKDQYGNYVIQKLL----KQLKGEEHQLFAEVLSVQL 838
Query: 292 AALR 295
+ LR
Sbjct: 839 SVLR 842
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 13/166 (7%)
Query: 141 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ----HVL 196
+H + + + G + + ++ ++ + IS N L + GNYVVQ H
Sbjct: 541 DHIVEFSGDQHGSRFIQSKLETANSDEKEHVFREISANTLVLMQDVFGNYVVQKFFEHGS 600
Query: 197 NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVAS 256
L+ +L + +RG VDLS VVQK L++ ++ +++V
Sbjct: 601 QLQKKYLAE----QMRGKIVDLSTQTYACRVVQKALQHILVDQQVILAKELEIDVIRVVK 656
Query: 257 DKYGNYVIQTALVETMRQDRLS----VHQRLVTKLQQHLAALRVMK 298
D GN+VIQ +VE + ++ ++ + V +L H RV++
Sbjct: 657 DPNGNHVIQK-VVELVPREHINFIIDAFRGRVRELSAHNYGCRVIQ 701
>gi|125528359|gb|EAY76473.1| hypothetical protein OsI_04410 [Oryza sativa Indica Group]
Length = 1046
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 145/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + D +F + LM+ +G +V KF E + +Q +
Sbjct: 725 GSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFFEHGSAAQ------RR 778
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQLF L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 779 ELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTELDGHIMRCVR----DQNGN 834
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLIS 176
VI KC+E FI + L+ H GC + +++ + ++I + I
Sbjct: 835 HVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTYPKTQEIVMDEIL 894
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L++ + GNYVVQHVL P I L G + +S K S VV+K L +
Sbjct: 895 QSVCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGG 954
Query: 237 AV--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ E+L + ++ LQ + D++GNYV+Q L Q R + ++++++ H
Sbjct: 955 PAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR----ELILSRVKVH 1010
Query: 291 LAALRVMKYG 300
L+AL+ YG
Sbjct: 1011 LSALKKYTYG 1020
>gi|242054955|ref|XP_002456623.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
gi|241928598|gb|EES01743.1| hypothetical protein SORBIDRAFT_03g039600 [Sorghum bicolor]
Length = 1057
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + LM+ +G +V KF E + Q + K+
Sbjct: 736 GSRFIQQKLETATVEEKNMVFEEIMPHALSLMTDVFGNYVVQKFFEHGSAEQRRELADKL 795
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGSSV 119
L S+ +G ++K I+VV L + L +M + G+ V
Sbjct: 796 LGH---VLALSLQMYGCRVIQKAIEVVD-----LDQKTKMVTELDGHIMKCVRDQNGNHV 847
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVN 178
I KC+E FI H + L+ H GC + +++ + +QI + I +
Sbjct: 848 IQKCIECVPEDSIQFIISTFYGHVVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQS 907
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
L++ + GNYVVQHVL P I L G + +S K S VV+K L + A
Sbjct: 908 VCMLAQDQYGNYVVQHVLEHGKPHERSIIIEKLAGQIIQMSQQKFASNVVEKCLTFGGAT 967
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
++ E+L + ++ LQ + D++GNYV+Q L Q R + ++++++ HL
Sbjct: 968 EREVLISEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQR----ELILSRVKVHLN 1023
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1024 ALKKYTYG 1031
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
++ H +S + +F G+ V+ K E + + L H L L+ GC
Sbjct: 759 IMPHALSLMTDVF--------GNYVVQKFFEHGSAEQRRELADKLLGHVLALSLQMYGCR 810
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ I+ + ++ +++ + + R ++GN+V+Q + I I GH
Sbjct: 811 VIQKAIEVVDLDQKTKMVTELDGHIMKCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGH 870
Query: 215 YVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVET 271
V LS G V+Q+ L++ +++E+L S + +A D+YGNYV+Q L
Sbjct: 871 VVPLSTHPYGCRVIQRVLEHCADPKTQQIVMDEILQS--VCMLAQDQYGNYVVQHVL--- 925
Query: 272 MRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
+ H+R ++ KL + + K+ SN
Sbjct: 926 ---EHGKPHERSIIIEKLAGQIIQMSQQKFASN 955
>gi|297790299|ref|XP_002863049.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
gi|297308854|gb|EFH39308.1| hypothetical protein ARALYDRAFT_920647 [Arabidopsis lyrata subsp.
lyrata]
Length = 503
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 179 GSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELGEKL 238
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
D + L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 239 I--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 290
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 291 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILST 350
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 351 VSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 410
Query: 239 --HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 411 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 466
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 467 ALKKYTYG 474
>gi|301099064|ref|XP_002898624.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105049|gb|EEY63101.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 907
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 151/340 (44%), Gaps = 53/340 (15%)
Query: 1 EEGSQYLQEKLSSGD-SRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ G + LQE+L D + D ++ E+M +G ++F K +E E Q +II
Sbjct: 474 QNGCRLLQEQLDYEDRGDLCDVIYQESLEHLAEMMVDPFGNYLFQKLLERVKEKQRLVII 533
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH--------------------- 98
+++ + A+++ G+ SV+K+++V A S ++
Sbjct: 534 RRVSSN---LVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGK 590
Query: 99 ----------VMSALKRLFKFLMMTKPGSSVILKCLE---PSYNHKNDFIYQAALEHCLY 145
++ ALK L + G+ VI + L+ P YN F++ A + C
Sbjct: 591 GRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQ---FVFDAVCKECTT 647
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN---LEDPF 202
+ H GC L +D +++ +++ + A L + GNYVVQ+VL+ E+ F
Sbjct: 648 VGTHRHGCCVLQRCLDAANKTQKAEVIAQVERQAMKLMQDPYGNYVVQYVLDSCTAEEAF 707
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYG 260
+ GH +LS+ K S V++K L+ + + E+ + ++ ++ D++
Sbjct: 708 ---GVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFA 764
Query: 261 NYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
NYV+Q AL + L LV ++ HLAA++ G
Sbjct: 765 NYVVQRALCVCAEEQCL----LLVKAIRPHLAAMKNTSGG 800
>gi|357454231|ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP [Medicago truncatula]
gi|355486444|gb|AES67647.1| Pumilio-like protein [Medicago truncatula]
Length = 1047
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 145/308 (47%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ ++ LM+ +G +V KF E SQ + K+
Sbjct: 726 GSRFIQQKLETATTEEKNMVYQEITPHALALMTDVFGNYVVQKFFEHGLASQRRELANKL 785
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 786 YGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVQELDGNIMRCVRDQNGNHV 837
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E DFI + + L+ H GC + +++ + +Q ++ I
Sbjct: 838 IQKCIECVPEDAIDFIISTFFDQVVTLSTHPYGCRVIQRVLEHCENPDTQQKVMDEILGA 897
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G+ V +S K S VV+K L +
Sbjct: 898 VSMLAQDQYGNYVVQHVLEHGKPHERSTIIKELAGNIVQMSQQKFASNVVEKCLTFGGPS 957
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL
Sbjct: 958 ERLLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLN 1013
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1014 ALKKYTYG 1021
>gi|9757838|dbj|BAB08275.1| unnamed protein product [Arabidopsis thaliana]
Length = 546
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 136/276 (49%), Gaps = 16/276 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+E S+ L + G +D ++ + G ELM YG V + C+ Q+ ++
Sbjct: 212 KEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVD 271
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ-SPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+T Q F+ +D G+++++ L+ + + + + ++ ++ + L + V
Sbjct: 272 IVTQQMFQFVNICIDSLGTNAIQVLLTCINERAKDQIPRIVDVVRTVALQLSKSNHAIFV 331
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN-----NFIDNMKGSRRKQILHL 174
IL C H + + +++C +A + GC L + + N++ R++ I+
Sbjct: 332 ILACFRLFPLHCR-LLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLE-IRQRLIMEA 389
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I+ NA L + GNYVVQ+++ L + +LIDA+ L G+Y L+ K GS VQK LK
Sbjct: 390 IA-NALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLK- 447
Query: 235 QNAVHYIVEELLNSDQILQVAS---DKYGNYVIQTA 267
+ +I ++ D + ++ + D +GNYVIQTA
Sbjct: 448 ---LRWIDSRVIVIDLLREIDTLLLDPFGNYVIQTA 480
>gi|356530316|ref|XP_003533728.1| PREDICTED: pumilio homolog 5-like [Glycine max]
Length = 985
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +F V +LM+ +G +V KF E + Q +
Sbjct: 669 QHGSRFIQQKLESCSVEEKTLVFKEVLPHASKLMTDVFGNYVIQKFFEYGSPEQRRELAD 728
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 729 RLVGQ---ILPLSLQMYGCRVIQKALEVIELEQKAQLVHELDGNVMRCVR----DQNGNH 781
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E K FI A L+ H GC + +++ + Q I+ I
Sbjct: 782 VIQKCIESIPTKKISFILSAFRGQVATLSMHPYGCRVMQRVLEHCTDESQCQFIVDEILE 841
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ +L++ + GNYV QHVL P I L GH V LS K S VV+K L+Y +
Sbjct: 842 SVCALAQDQYGNYVTQHVLERGKPQERSQIINKLSGHIVQLSQHKFASNVVEKCLEYGDT 901
Query: 238 VHY--IVEELLNSDQ----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQ 289
+V E+ D+ +L + D++ NYV+Q + D S +QR L++ ++
Sbjct: 902 TERELLVAEIFGHDEKCDNLLTMMKDQFANYVVQKVI------DICSENQRAMLLSHVRI 955
Query: 290 HLAALRVMKYG 300
H AL+ YG
Sbjct: 956 HAHALKKYTYG 966
>gi|237506877|gb|ACQ99191.1| pumilio [Bombyx mori]
Length = 364
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 30/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q +
Sbjct: 38 QHGSRFVQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEPGTTEQKTTLAQ 97
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
K+ L ++ +G ++K ++ + PP L HV+ +K
Sbjct: 98 KVVQVRGHVLNLALQMYGCRVIQKALESI---PPEQQQEVVRKLDGHVLKCVK------- 147
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L+ H GC + +++ + +
Sbjct: 148 -DQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCSVIQRILEHCTPEQTAPV 206
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L+ + + L + GNYVVQHVL + A+RG + LS K S VV+K
Sbjct: 207 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 266
Query: 232 LKY--QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ + +N +++EL N + + + D++ NYV+Q + V Q ++ +H K
Sbjct: 267 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMH-----K 321
Query: 287 LQQHLAALRVMKYGSN 302
++ H+ +LR YG +
Sbjct: 322 IRPHIGSLRKYTYGKH 337
>gi|8394|emb|CAA44474.1| pumilio [Drosophila melanogaster]
Length = 1533
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 149/317 (47%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 1123 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 1182
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 1183 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 1237
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1238 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 1297
Query: 181 SLSRHRSGNYVVQHVL---NLED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 1298 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 1353
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK+++++A
Sbjct: 1354 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRKNMA 1409
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 1410 ALRKYTYGKHINAKLEK 1426
Score = 67.4 bits (163), Expect = 7e-09, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 113/235 (48%), Gaps = 16/235 (6%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH 130
S D+ GS ++ KL + A +++ +++A L M G+ VI K E
Sbjct: 1120 SQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSL----MTDVFGNYVIQKFFEFGTPE 1175
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ + + H L LA GC + ++++ ++++I+H + + + ++GN+
Sbjct: 1176 QKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNH 1235
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELL-N 247
VVQ + DP + I A +G LS G V+Q+ L++ A I++EL +
Sbjct: 1236 VVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEH 1295
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q++Q D+YGNYVIQ L ++D+ L+ ++ + L K+ SN
Sbjct: 1296 TEQLIQ---DQYGNYVIQHVLEHGKQEDK----SILINSVRGKVLVLSQHKFASN 1343
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 1115 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 1174
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 1175 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 1232
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 1233 GNHVVQKCI 1241
Score = 37.4 bits (85), Expect = 8.0, Method: Composition-based stats.
Identities = 48/238 (20%), Positives = 98/238 (41%), Gaps = 13/238 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S ++ + G + + Q G V K IE + L II
Sbjct: 1197 GCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFII--N 1254
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q++ L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 1255 AFKGQVYSL-STHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQLIQ----DQYGNYVI 1309
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVNA 179
LE + + L L+ H+ + + + +G R I + + N
Sbjct: 1310 QHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFND 1369
Query: 180 ASLS---RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+L + + NYVVQ ++++ +P + + +R + L G + K KY
Sbjct: 1370 NALHVMMKDQYANYVVQKMIDVSEPTQLKKLMTKIRKNMAALRKYTYGKHINAKLEKY 1427
>gi|225443381|ref|XP_002266669.1| PREDICTED: pumilio homolog 5 [Vitis vinifera]
gi|297735758|emb|CBI18445.3| unnamed protein product [Vitis vinifera]
Length = 1053
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 144/309 (46%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F V LM+ +G +V KF E Q +
Sbjct: 709 QHGSRFIQQKLENCSGEEKASVFKEVLPHASRLMTDVFGNYVIQKFFEHGTPEQRRELAY 768
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ Q + S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 769 QLAGQ---MIPLSLQMYGCRVIQKALEVIELDQKTQLVHELDGHVIRCVR----DQNGNH 821
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E K FI A L+ H GC + +++ + Q I+ I
Sbjct: 822 VIQKCIECIPTEKIGFIISAFKGQVTVLSSHPYGCRVIQRVLEHCSEVSQSQFIVDEILE 881
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L+ + GNYV QHVL +P I L G V +S K S V++K L+Y +
Sbjct: 882 SAYVLAEDQYGNYVTQHVLERGNPHERSQIISKLTGKIVQMSQHKYASNVIEKCLEYGST 941
Query: 238 --VHYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
++EE++ ++D +L + D++ NYV+Q L + + R + L+ +++ HL
Sbjct: 942 SECELLIEEIIGQSEDNDNLLVMMKDQFANYVVQKILETSNDKQR----EILLNRIRVHL 997
Query: 292 AALRVMKYG 300
AL+ YG
Sbjct: 998 NALKKYTYG 1006
>gi|241952587|ref|XP_002419015.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
gi|223642355|emb|CAX42597.1| mRNA-binding protein, putative [Candida dubliniensis CD36]
Length = 789
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 147/311 (47%), Gaps = 57/311 (18%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ +L + + I +++++ V ELM +G ++ K N Q ++
Sbjct: 456 QHGCRFLQRELFNETNATLIFNEIYFKV----VELMIDPFGNYLIQKLFTMINLEQRLVL 511
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKRLFKFLMM 112
I + + ++LF +A +D G+ S++KLI V+ + + LY + L R
Sbjct: 512 INQSS--NELFRIA-LDPHGTRSLQKLIDVIENNEEIEIITRNLYSNIVVLSRDLN---- 564
Query: 113 TKPGSSVILKCL----------------EPSYNH----KNDFIYQAALEHCLYLACHEQG 152
G+ V+ K L + NH +N FI+ + LY+ACH G
Sbjct: 565 ---GNHVVQKILTKFNTISHNANSSHSSKDETNHENQNQNQFIFDIIQANLLYIACHRHG 621
Query: 153 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL------------ED 200
C L +D + +Q+ I+ + LS GNYVVQ+VLN ED
Sbjct: 622 CCVLQRCLDYGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVSQTKIIDDEED 681
Query: 201 PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ---ILQVASD 257
++D I ++ +++ LSL K GS V++K LK + + +++ L+ D Q+ +D
Sbjct: 682 KQVMDNIIQEIKSNFIQLSLHKFGSNVIEKCLKITSISNDLIDNLIELDHGQAFNQLLND 741
Query: 258 KYGNYVIQTAL 268
+GNYV+QT+L
Sbjct: 742 PFGNYVLQTSL 752
>gi|326512976|dbj|BAK03395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 886
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + D +F + LM+ +G +V KF E + +Q+ +
Sbjct: 562 GSRFIQQKLETASVEEKDMVFTEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELA--- 618
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGS 117
DQL L S+ +G ++K I+VV Q ++ + + R + + G+
Sbjct: 619 ---DQLIGRVLALSLQMYGCRVIQKAIEVVDLDQQTKMVAELDGHVMRCVR----DQNGN 671
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLIS 176
VI KC+E + +FI + L+ H GC + +++ + +QI+ +
Sbjct: 672 HVIQKCIECIPQNIIEFIVSTFYGQVVVLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEVL 731
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ L+ + GNYVVQHV+ P AI L G V +S K S V++K L + +
Sbjct: 732 QSVCLLATDQYGNYVVQHVMEHGKPHERSAIIEKLIGQIVQMSQQKFASNVIEKCLSFGS 791
Query: 237 AVHY--IVEELLNSDQILQ----VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V ++ E+L S + + + D++ NYV+Q L Q R + ++T+++ H
Sbjct: 792 PVERQILIGEMLGSTEESEHLEVMMKDQFANYVVQKVLETCDDQQR----EAILTRIKAH 847
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 848 LNTLKKYTYG 857
>gi|147775244|emb|CAN61602.1| hypothetical protein VITISV_024967 [Vitis vinifera]
Length = 1039
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 718 GSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKL 777
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L S+ +G ++K I+VV P ++ L + + G+ VI K
Sbjct: 778 YGH---VLTLSLQMYGCRVIQKAIEVV--DPDQKIKMVEELDGHIMRCVRDQNGNHVIQK 832
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAAS 181
C+E FI + + L+ H GC + +++ + + + +++ I + +
Sbjct: 833 CIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSM 892
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L++ + GNYVVQHVL P AI L G V +S K S VV+K L +
Sbjct: 893 LAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQ 952
Query: 241 -IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL AL+
Sbjct: 953 ILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLNALK 1008
Query: 296 VMKYG 300
YG
Sbjct: 1009 KYTYG 1013
>gi|254568676|ref|XP_002491448.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|238031245|emb|CAY69168.1| Protein of the mitochondrial outer surface [Komagataella pastoris
GS115]
gi|328352042|emb|CCA38441.1| Pumilio homolog 1 [Komagataella pastoris CBS 7435]
Length = 759
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 23/314 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++LS D +F + ++ELM+ +G +V K+ E +E Q A ++
Sbjct: 434 QHGSRFIQQQLSKATKEEKDTIFEEIEPTSYELMTDVFGNYVIQKYFEHGSEEQKARLLK 493
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T + Q S+ +G V++ ++ V + + S L+ L+ + G+ VI
Sbjct: 494 IMTGKVQSL---SLQMYGCRVVQRALEFVQLEQQI--EIASELQDNVLQLVEDQNGNHVI 548
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E + FI ++ +H +L+ H GC + ++ S +K IL ++S +
Sbjct: 549 QKSIEKISFDQISFILESLRQHIYHLSTHPYGCRVIQRLLEYCSESEQKFILEVLSNHIF 608
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + + GNYV+QH+L + I + + V S K S V+K + Y N
Sbjct: 609 YLIQDQYGNYVIQHILEFGEEGYRSTITEIVTKNLVMFSKHKFASNAVEKCIIYGNKEHR 668
Query: 239 HYIVEELLNSDQILQVAS------------DKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
H + ELL ++ L+V + D + NYV+Q +V+ + +D + L+ K
Sbjct: 669 HMLFNELLKDNKSLEVTTVDDNSALALMMKDPFANYVVQ-KMVDALDEDDKKL---LIIK 724
Query: 287 LQQHLAALRVMKYG 300
++Q+L + Y
Sbjct: 725 IKQYLKQISKSSYA 738
>gi|414869530|tpg|DAA48087.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1036
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + LM+ +G +V KF E Q +
Sbjct: 719 QHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLAT 778
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 779 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHIMRCVR----DQNGNH 831
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-----ILH 173
VI KC+E F+ A L+ H GC + +++ G+ + Q IL
Sbjct: 832 VIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEILQ 891
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L++ + GNYV QHVL I L G V +S K S V++K +
Sbjct: 892 WVCI----LAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCFQ 947
Query: 234 YQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ + + IVE+ ++ +L + D+Y NYV+Q ++ET +D+ + L++++
Sbjct: 948 HGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQ-KILETCNEDQREL---LLSRV 1003
Query: 288 QQHLAALRVMKYG 300
+ H+ ALR YG
Sbjct: 1004 KDHMQALRKYTYG 1016
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + + H L L+ GC + ++ M+ ++ ++H +
Sbjct: 757 GNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHEL 816
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ R ++GN+V+Q + I + A +G LS+ G V+Q+ L++
Sbjct: 817 DGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHC 876
Query: 235 --QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
+ I++E+L IL A D+YGNYV Q L +R H+R ++TKL
Sbjct: 877 GGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKAHERSQIITKLAGQ 928
Query: 291 LAALRVMKYGSN 302
+ + KY SN
Sbjct: 929 VVTMSQNKYASN 940
>gi|83771739|dbj|BAE61869.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 860
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + G + +LM+ +G +V K E N++Q ++
Sbjct: 457 QHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 516
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 517 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRCVRDQNGN 568
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + F+ A + LA H GC + +++ K R+ IL + V
Sbjct: 569 HVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDREAILAELHV 628
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N ED + + + + S K S VV+K +++
Sbjct: 629 CTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASNVVEKSIEFGQ 687
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ H I+ L ++D +L + D++GNYVIQ L + +R + LV +++
Sbjct: 688 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA----LVEEIKP 743
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 744 LLSQLKKYSYG 754
>gi|6056191|gb|AAF02808.1|AC009400_4 putative RNA binding protein [Arabidopsis thaliana]
Length = 1031
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + + LM+ +G +V KF E Q + ++
Sbjct: 678 GSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQV 737
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
T L S+ +G ++K ++VV L +K L +M + G+ V
Sbjct: 738 TGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKCVHDQNGNHV 789
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVN 178
I KC+E FI + L L+ H GC + ++++ ++ I+ I +
Sbjct: 790 IQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDS 849
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L++ + GNYV+QH++ P I L G V +S K S VV+K L +
Sbjct: 850 VCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPE 909
Query: 239 --HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D +GNYV+Q L ET L++ ++++++ HL
Sbjct: 910 ERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---ILSRIKVHLN 965
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 966 ALKRYTYG 973
>gi|256082284|ref|XP_002577388.1| pumilio [Schistosoma mansoni]
gi|350645490|emb|CCD59842.1| pumilio, putative [Schistosoma mansoni]
Length = 1309
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 36/326 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + + +F + + +LM+ +G +V KF E + Q L+
Sbjct: 950 QHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQ 1009
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + A+ +G ++K ++ V + H++ L+ + + G+ VI
Sbjct: 1010 RL--QGHVVEFAT-QMYGCRVIQKALESVPAEAKI--HIVGELRPFVTRCVKDQNGNHVI 1064
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + DFI A + L+ H GC + +++ + + IL +
Sbjct: 1065 QKCIECVPPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILDELHKGVE 1124
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + + GNYV+QHVL I LRG LS K S V++K + NAV
Sbjct: 1125 HLVKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIA--NAVPS 1182
Query: 239 --HYIVEELLN-------------------SDQILQVASDKYGNYVIQTAL-VETMRQDR 276
++EE+L+ S ++ + D+Y NYV+Q L + Q R
Sbjct: 1183 ERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLELADTEQRR 1242
Query: 277 LSVHQRLVTKLQQHLAALRVMKYGSN 302
+ L+ +++ LR YG +
Sbjct: 1243 V-----LINRIRPMQNVLRKFNYGKH 1263
>gi|256082282|ref|XP_002577387.1| pumilio [Schistosoma mansoni]
gi|350645489|emb|CCD59841.1| pumilio, putative [Schistosoma mansoni]
Length = 1501
Score = 80.1 bits (196), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/326 (23%), Positives = 144/326 (44%), Gaps = 36/326 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + + +F + + +LM+ +G +V KF E + Q L+
Sbjct: 1057 QHGSRFIQQKLETATTAEKNSVFNEILPHSGKLMTDVFGNYVIQKFFEFGTKEQKELLSQ 1116
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q + A+ +G ++K ++ V + H++ L+ + + G+ VI
Sbjct: 1117 RL--QGHVVEFAT-QMYGCRVIQKALESVPAEAKI--HIVGELRPFVTRCVKDQNGNHVI 1171
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + DFI A + L+ H GC + +++ + + IL +
Sbjct: 1172 QKCIECVPPSELDFIISAFRGQVVLLSSHPYGCRVIQRILEHCLPEQTRPILDELHKGVE 1231
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
L + + GNYV+QHVL I LRG LS K S V++K + NAV
Sbjct: 1232 HLVKDQYGNYVIQHVLEHGSNEDKSRIIQNLRGRVCALSSHKFASNVMEKAIA--NAVPS 1289
Query: 239 --HYIVEELLN-------------------SDQILQVASDKYGNYVIQTAL-VETMRQDR 276
++EE+L+ S ++ + D+Y NYV+Q L + Q R
Sbjct: 1290 ERAVLIEEILHPISNVNINGDTSSVTTNNISSSLVDMMKDQYANYVVQRMLELADTEQRR 1349
Query: 277 LSVHQRLVTKLQQHLAALRVMKYGSN 302
+ L+ +++ LR YG +
Sbjct: 1350 V-----LINRIRPMQNVLRKFNYGKH 1370
>gi|440906069|gb|ELR56374.1| Pumilio-like protein 2 [Bos grunniens mutus]
Length = 1066
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 854
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 855 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 914
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 915 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 974
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 975 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1028
Query: 292 AALRVMKYGSN 302
+ LR YG +
Sbjct: 1029 STLRKYTYGKH 1039
Score = 40.8 bits (94), Expect = 0.87, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 870
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 871 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 924
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 925 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 984
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 985 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKL 1044
Query: 232 LKY 234
KY
Sbjct: 1045 EKY 1047
>gi|225434877|ref|XP_002283191.1| PREDICTED: pumilio homolog 1-like [Vitis vinifera]
Length = 1065
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 16/305 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 744 GSRFIQQKLETATTEEKNMVYQEIIPQALSLMTDVFGNYVIQKFFEHGLVSQRRELAGKL 803
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L S+ +G ++K I+VV P ++ L + + G+ VI K
Sbjct: 804 YGH---VLTLSLQMYGCRVIQKAIEVV--DPDQKIKMVEELDGHIMRCVRDQNGNHVIQK 858
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-RKQILHLISVNAAS 181
C+E FI + + L+ H GC + +++ + + + +++ I + +
Sbjct: 859 CIECVPEDAIQFIISTFFDQVVTLSTHPYGCRVIQRVLEHCRDPKTQSKVMDEILGSVSM 918
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY- 240
L++ + GNYVVQHVL P AI L G V +S K S VV+K L +
Sbjct: 919 LAQDQYGNYVVQHVLEHGQPHERSAIIKELAGKIVQMSQQKFASNVVEKCLTFGGPAERQ 978
Query: 241 -IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL AL+
Sbjct: 979 ILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLNALK 1034
Query: 296 VMKYG 300
YG
Sbjct: 1035 KYTYG 1039
>gi|414869535|tpg|DAA48092.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 1043
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + LM+ +G +V KF E Q +
Sbjct: 726 QHGSRFIQQKLENCTAEEKTSVFAEILPHASALMTDVFGNYVIQKFFEHGTREQRRDLAT 785
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ L S+ +G ++K ++V+ Q L++ + + R + + G+
Sbjct: 786 KLVGH---VLPLSLQMYGCRVIQKALEVMELDQKIDLVHELDGHIMRCVR----DQNGNH 838
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-----ILH 173
VI KC+E F+ A L+ H GC + +++ G+ + Q IL
Sbjct: 839 VIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCIIDEILQ 898
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L++ + GNYV QHVL I L G V +S K S V++K +
Sbjct: 899 WVCI----LAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCFQ 954
Query: 234 YQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ + + IVE+ ++ +L + D+Y NYV+Q ++ET +D+ + L++++
Sbjct: 955 HGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQ-KILETCNEDQREL---LLSRV 1010
Query: 288 QQHLAALRVMKYG 300
+ H+ ALR YG
Sbjct: 1011 KDHMQALRKYTYG 1023
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + + H L L+ GC + ++ M+ ++ ++H +
Sbjct: 764 GNYVIQKFFEHGTREQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIDLVHEL 823
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ R ++GN+V+Q + I + A +G LS+ G V+Q+ L++
Sbjct: 824 DGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHC 883
Query: 235 --QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQH 290
+ I++E+L IL A D+YGNYV Q L +R H+R ++TKL
Sbjct: 884 GGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKAHERSQIITKLAGQ 935
Query: 291 LAALRVMKYGSN 302
+ + KY SN
Sbjct: 936 VVTMSQNKYASN 947
>gi|145501806|ref|XP_001436883.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404028|emb|CAK69486.1| unnamed protein product [Paramecium tetraurelia]
Length = 475
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 148/306 (48%), Gaps = 24/306 (7%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ +Q+ +G + ++FW V E +G ++ K +E + +Q LI ++
Sbjct: 163 SRKVQKIFETGSANQKQQIFWKVQANCQEFSKDVFGNYLIQKILEKGSLAQQILIFKQLL 222
Query: 64 FQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKC 123
L S + FG ++KLI++++ + L+ + +K+ + L++ + G VILKC
Sbjct: 223 ---PYVLELSKNNFGCRVIQKLIEIISNNDQLINPFIEEIKKNVQSLLIDQNGKYVILKC 279
Query: 124 LEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS-- 181
LE FI + E C ++ + GC + I+N Q+ LI + ++
Sbjct: 280 LENLQIDAVRFILKPTEEQCNHMCDSQYGCKIIQKLIENYPS----QVDDLIQICISTQD 335
Query: 182 -LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-----Q 235
L + +SGNY++Q+ ++ P ++ I + H L K S V+ L+Y +
Sbjct: 336 LLYKSQSGNYIIQYA--IKQPKNLEVIANYIINHLEYLCFNKYASNTVEAILEYLTPKLK 393
Query: 236 NAVHYIVEELLNSDQI---LQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
N + I+ +L + +++ + +A++ +GNYVI+ L L Q+L+ ++Q+L
Sbjct: 394 NDLIQILIKLSDQNKMFIFINIATNPFGNYVIKRLLYTF----ELEHTQQLLNVIKQNLN 449
Query: 293 ALRVMK 298
L+ +K
Sbjct: 450 LLQYIK 455
>gi|22330960|ref|NP_187647.2| protein pumilio 4 [Arabidopsis thaliana]
gi|313471414|sp|Q9SS47.2|PUM4_ARATH RecName: Full=Pumilio homolog 4; Short=APUM-4; Short=AtPUM4
gi|332641375|gb|AEE74896.1| protein pumilio 4 [Arabidopsis thaliana]
Length = 1003
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + + LM+ +G +V KF E Q + ++
Sbjct: 678 GSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTTKQRKELAEQV 737
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
T L S+ +G ++K ++VV L +K L +M + G+ V
Sbjct: 738 TGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARMVKELDGSVMKCVHDQNGNHV 789
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVN 178
I KC+E FI + L L+ H GC + ++++ ++ I+ I +
Sbjct: 790 IQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDS 849
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L++ + GNYV+QH++ P I L G V +S K S VV+K L +
Sbjct: 850 VCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPE 909
Query: 239 --HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D +GNYV+Q L ET L++ ++++++ HL
Sbjct: 910 ERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCDDQSLAL---ILSRIKVHLN 965
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 966 ALKRYTYG 973
>gi|158828184|gb|ABW81063.1| Mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 645 GSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPPQRRELAEKL 704
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
F + L L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 705 -FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 756
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVN 178
+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 757 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILST 816
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 817 VSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 876
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 877 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 932
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 933 ALKKYTYG 940
>gi|242063522|ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 144/307 (46%), Gaps = 20/307 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + LM+ +G +V KF E E+Q +
Sbjct: 679 GSRFIQQKLETASIEEKNMIFPEILPQARTLMTDVFGNYVIQKFFEYGTETQTKQLA--- 735
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q + + ++ R + + G+ VI
Sbjct: 736 TLLKGYVLQLSLQMYGCRVIQKALEVVEVEQQTQMALELDGSIMRCVR----DQNGNHVI 791
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVNA 179
KC+E + FI A H + L+ H GC + +++ S + ++ I +
Sbjct: 792 QKCIECIPQERIRFIISAFYGHVVELSMHPYGCRVIQRVLEHCDDESTQNAMMEEIMQSV 851
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+L+ + GNYV+QHVL P I L G V +S K S VV+K L + N
Sbjct: 852 VTLTEDQYGNYVIQHVLQHGKPEERSTIITQLAGQIVKMSQQKFASNVVEKCLTFGNPEQ 911
Query: 240 Y--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ E+L + ++ LQ + D++ NYV+Q L Q+R + ++++++ HL A
Sbjct: 912 RQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLEICDDQNR----ELILSRIKVHLNA 967
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 968 LKRYTYG 974
>gi|317148910|ref|XP_001823002.2| mRNA binding protein Pumilio 2 [Aspergillus oryzae RIB40]
Length = 880
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + G + +LM+ +G +V K E N++Q ++
Sbjct: 477 QHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 536
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 537 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRCVRDQNGN 588
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + F+ A + LA H GC + +++ K R+ IL + V
Sbjct: 589 HVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDREAILAELHV 648
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N ED + + + + S K S VV+K +++
Sbjct: 649 CTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASNVVEKSIEFGQ 707
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ H I+ L ++D +L + D++GNYVIQ L + +R + LV +++
Sbjct: 708 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA----LVEEIKP 763
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 764 LLSQLKKYSYG 774
>gi|255733004|ref|XP_002551425.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131166|gb|EER30727.1| predicted protein [Candida tropicalis MYA-3404]
Length = 675
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 40/284 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ +L + + D +F + ELM +G ++ K E N Q LI++
Sbjct: 380 QHGCRFLQRELYNETN--TDLIFNEICPKISELMIDPFGNYLVQKLFEMVNSDQ-RLILI 436
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ-----------SPPLLYHVMSALKRLFKF 109
K T + L S+D G+ + +KLI V+ SP HV++ +
Sbjct: 437 KNTSSE--LLRISLDPHGTRAFQKLIDVIETEEEINIIIDKVSP----HVVTLIYDSNGN 490
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
++ K I+ L P + Y+ ++ +ACH GC L +D+ S+RK
Sbjct: 491 HLIQK-----IITKLAP------EIFYEIICDNLFSIACHRHGCCVLQKCLDHGSESQRK 539
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
Q+ IS LS GNYV+Q++L D ID + ++ + ++L K GS +++
Sbjct: 540 QLSLEISKYTFELSLDPFGNYVIQYILKKGDKESIDTLLEKIKFNLINLCTNKFGSNIIE 599
Query: 230 KFLKYQNAVHYIVEELLN-----SDQILQVASDKYGNYVIQTAL 268
L+ + + EL+N SD+ ++ +D +GNYVIQT+L
Sbjct: 600 CLLR----IPILSTELINCLIEKSDEFYKMVNDPFGNYVIQTSL 639
>gi|41688714|sp|Q8TB72.2|PUM2_HUMAN RecName: Full=Pumilio homolog 2; Short=Pumilio-2
gi|119621229|gb|EAX00824.1| pumilio homolog 2 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1066
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 854
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 855 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 914
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 915 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 974
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 975 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1028
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1029 TTLRKYTYGKH 1039
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 870
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 871 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 924
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 925 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 984
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 985 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1044
Query: 232 LKY 234
KY
Sbjct: 1045 EKY 1047
>gi|15239174|ref|NP_199123.1| pumilio 13 [Arabidopsis thaliana]
gi|75171666|sp|Q9FMH4.1|PUM13_ARATH RecName: Full=Putative pumilio homolog 13; Short=APUM-13;
Short=AtPUM13
gi|9757836|dbj|BAB08273.1| unnamed protein product [Arabidopsis thaliana]
gi|332007526|gb|AED94909.1| pumilio 13 [Arabidopsis thaliana]
Length = 527
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 143/309 (46%), Gaps = 12/309 (3%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ L++ + G +D +F + ELM +G V I C+ Q+ LI+ +T
Sbjct: 223 SKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCSSEQIILIVDVVT 282
Query: 64 FQDQLFLLASVDKFGSSSVKKLIKVV-AQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
F+ + G+ +++ L+ + ++ + +M A+ + L VIL
Sbjct: 283 RHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAISSVALQLTRNTNAKYVILA 342
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR---RKQILHLISVNA 179
C + + + + +HC +A + GC L D + R++++ + +A
Sbjct: 343 CFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERVPNHEIRQRLISEVIEHA 402
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN-AV 238
L + GNYVVQ+V+ L++ D + L +Y L+ K GS VVQK LK +
Sbjct: 403 LKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNKYGSHVVQKLLKLRGIDS 462
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
IV +LL L + D +GNYVIQTA + + V Q L +++++ +R K
Sbjct: 463 KLIVVDLLRGIDTLLL--DPFGNYVIQTAWFVS----KEDVRQMLRYYIERNIRLMRCNK 516
Query: 299 YGSNKEIQK 307
+G NK ++K
Sbjct: 517 FG-NKILEK 524
>gi|410258978|gb|JAA17455.1| pumilio homolog 2 [Pan troglodytes]
gi|410298914|gb|JAA28057.1| pumilio homolog 2 [Pan troglodytes]
gi|410335701|gb|JAA36797.1| pumilio homolog 2 [Pan troglodytes]
Length = 1067
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 855
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 856 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 915
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 916 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 975
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 976 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1029
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1030 TTLRKYTYGKH 1040
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 871
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 872 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 925
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 926 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 985
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 986 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1045
Query: 232 LKY 234
KY
Sbjct: 1046 EKY 1048
>gi|355565487|gb|EHH21916.1| hypothetical protein EGK_05087 [Macaca mulatta]
gi|355751134|gb|EHH55389.1| hypothetical protein EGM_04593 [Macaca fascicularis]
gi|380811082|gb|AFE77416.1| pumilio homolog 2 [Macaca mulatta]
gi|383417011|gb|AFH31719.1| pumilio homolog 2 [Macaca mulatta]
Length = 1067
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 855
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 856 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 915
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 916 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 975
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 976 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1029
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1030 TTLRKYTYGKH 1040
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 871
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 872 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 925
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 926 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 985
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 986 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1045
Query: 232 LKY 234
KY
Sbjct: 1046 EKY 1048
>gi|281344230|gb|EFB19814.1| hypothetical protein PANDA_002991 [Ailuropoda melanoleuca]
Length = 1049
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 721 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 780
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 781 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 837
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 838 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 897
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 898 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 957
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 958 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1011
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1012 TTLRKYTYGKH 1022
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 795 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 853
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 854 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 907
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 908 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 967
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 968 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1027
Query: 232 LKY 234
KY
Sbjct: 1028 EKY 1030
>gi|391872405|gb|EIT81532.1| translational repressor Pumilio/PUF3 [Aspergillus oryzae 3.042]
Length = 906
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 150/311 (48%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + G + +LM+ +G +V K E N++Q ++
Sbjct: 503 QHGSRFIQQKLETANSDEKEQVFREIQGDSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 562
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 563 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELEHHVLRCVRDQNGN 614
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + F+ A + LA H GC + +++ K R+ IL + V
Sbjct: 615 HVIQKAIERVPSEHVQFVINAFIGQVEKLATHPYGCRVIQRMLEHCKEEDREAILAELHV 674
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N ED + + + + S K S VV+K +++
Sbjct: 675 CTAKLIPDQFGNYVIQHVIENGEDKDRTRMVTIVMS-NLLTYSKHKFASNVVEKSIEFGQ 733
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ H I+ L ++D +L + D++GNYVIQ L + +R + LV +++
Sbjct: 734 ESQRHQIISMLTSTDDNGENPLLGLIRDQFGNYVIQKVLCQLKGAERDA----LVEEIKP 789
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 790 LLSQLKKYSYG 800
>gi|213408907|ref|XP_002175224.1| PUF4 [Schizosaccharomyces japonicus yFS275]
gi|212003271|gb|EEB08931.1| PUF4 [Schizosaccharomyces japonicus yFS275]
Length = 846
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KCL + K FI+ A E+ + +A H GC L +D ++++ +
Sbjct: 646 GNHVIQKCLHKFSSEKLQFIFTAMEENIVEIATHRHGCCVLQRSLDRAGEENKRRLAFKV 705
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
NA +L + GNYVVQ+V +L + D + GH DLS+ K S ++K ++
Sbjct: 706 IANALALVQDPFGNYVVQYVFDLRNDEYNDMLVTQFSGHICDLSMQKFSSNAIEKCIRVS 765
Query: 236 N--AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+ ++EE+L S ++ ++ D Y NYVIQ+ L + + QRL+ + L
Sbjct: 766 TPESCERMLEEVLQSSRMEKLLKDSYANYVIQSFLTHVTGE----MQQRLLQAINPLLPK 821
Query: 294 LRVMKYG 300
+R +G
Sbjct: 822 IRNTCHG 828
>gi|297826303|ref|XP_002881034.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
gi|297326873|gb|EFH57293.1| mpt5-1 [Arabidopsis lyrata subsp. lyrata]
Length = 969
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 645 GSRFIQQKLETATTDEKNMVYEEIMPHAHALMTDVFGNYVIQKFFEHGLPPQRRELAEKL 704
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
F + L L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 705 -FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 756
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVN 178
+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 757 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILST 816
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 817 VSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 876
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 877 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 932
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 933 ALKKYTYG 940
>gi|158828286|gb|ABW81162.1| PMpt5-1 [Capsella rubella]
Length = 961
Score = 79.3 bits (194), Expect = 2e-12, Method: Composition-based stats.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 28/290 (9%)
Query: 26 VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 85
++G E S QYG + +E+ + ++ +I Q L D FG+ ++K
Sbjct: 637 IAGHVVEFSSDQYGSRFIQQKLETATTDEKNIVYEEIMPQA---LALMTDVFGNYVIQKA 693
Query: 86 IKVV------AQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAA 139
I+VV L HVM ++ + G+ V+ KC+E +FI
Sbjct: 694 IEVVDLDQKIKMVKELDGHVMRCVR--------DQNGNHVVQKCIECVPEENIEFIISTF 745
Query: 140 LEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL 198
+ + L+ H GC + +++ + + +++ I + L++ + GNYV+QHVL
Sbjct: 746 FGNVVTLSTHPYGCRVIQRVLEHCHEPDTQSKVMEEIMTTVSMLAQDQYGNYVIQHVLEH 805
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELL---NSDQILQ 253
P I L G V +S K S VV+K L + +V E+L + ++ LQ
Sbjct: 806 GKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEQRELLVNEMLGTTDENEPLQ 865
Query: 254 -VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ D++ NYV+Q L Q R + ++T+++ HL AL+ YG +
Sbjct: 866 AMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLNALKKYTYGKH 911
>gi|158578543|gb|ABW74568.1| Mpt5 [Boechera divaricarpa]
Length = 970
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 646 GSRFIQQKLETATADEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELAEKL 705
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
D + L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 706 I--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 757
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLISVN 178
+ KC+E +FI H + L+ H GC + +++ +++++ I
Sbjct: 758 VQKCIECVPEDNIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQRKVMEEILST 817
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 818 VSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 877
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 878 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 933
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 934 ALKKYTYG 941
>gi|452821243|gb|EME28276.1| serine rich Pumilio family RNA binding domain pr otein [Galdieria
sulphuraria]
Length = 471
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 98 HVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLN 157
++ S L + KFL G+ VI C + N F+Y E+ L LA H QGC +
Sbjct: 254 YLQSILSSVAKFLFKDVNGAHVIQHCFLYWSSEDNQFLYHTIQENFLELATHRQGCCMIQ 313
Query: 158 NFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVD 217
+D S+ I I + L GNYVVQH+L+ ++P I I L+GH+ +
Sbjct: 314 TSMDFACSSQLDDIATNIIQHIFVLIHDAFGNYVVQHILDSKNPRYIHDIMKKLQGHWYE 373
Query: 218 LSLTKCGSFVVQKFLKYQNAVHY--IVEELLNS-DQILQVASDKYGNYVIQTALVETMRQ 274
+S+ K S + +K L+ A ++EEL I + D YGNYVIQ L +
Sbjct: 374 MSMEKFSSNITEKCLQLAEATQRWEMIEELAQECSNIGNLLHDAYGNYVIQRMLQVASQP 433
Query: 275 DRLSVHQRLVTKLQQHLAALRVMKYGSNKEIQ 306
++ +L ++++ L +YG K+IQ
Sbjct: 434 QKI----QLKECIEKYWNTLSRSRYG--KQIQ 459
>gi|429963921|gb|ELA45919.1| hypothetical protein VCUG_02588 [Vavraia culicis 'floridensis']
Length = 550
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 143/305 (46%), Gaps = 30/305 (9%)
Query: 1 EEGSQYLQEKLS-SGDSRILDKLFWVVSGFTF-ELMSGQYGRFVFGKFIESCNESQLALI 58
+EGS+++Q++L S D ++ W+V EL + +G +V K IE N A I
Sbjct: 260 QEGSRFIQKRLELSTD----EEWIWLVKHIKVKELCTDLFGNYVIQKLIE--NRDCHAYI 313
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH-VMSALKRLFKFLMMTKPGS 117
+ + + SV+ FG V++L+ YH + LK L+ G+
Sbjct: 314 T---QYLEGCYKEMSVNAFGCRVVQRLLDEDVNGGGEYYHRIADELKAHILDLVYDSNGN 370
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ K +E + ++ F C+ L+ H+ GC L + + S I+ +
Sbjct: 371 HVVQKIVEREIDFESVF-----YNDCIQLSNHKYGCRVLQKLFEKNECS---TIIGKLID 422
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
N L+ ++ GNYV+QH++ + +L+ + L + SL K S V++K +K +
Sbjct: 423 NCLDLAENQYGNYVLQHIITIRPEYLV-RVSDILSPYIFSFSLHKFASNVIEKIIKMCDE 481
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ I++ELL S+ IL+++ DKY NYVIQ L R +R+ L ++ LR
Sbjct: 482 KRLNSILDELLASNCILKMSMDKYANYVIQRILESKSR-------ERVTNVLMANVNELR 534
Query: 296 VMKYG 300
Y
Sbjct: 535 NCVYS 539
>gi|158828235|gb|ABW81112.1| putative pumilio Mpt5-2 [Boechera divaricarpa]
Length = 967
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 643 GSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELAEKL 702
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
F + L L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 703 -FDNVLPL--SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 754
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
+ KC+E +FI H + L+ H GC + +++ + +++ I
Sbjct: 755 VQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEILST 814
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 815 VSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 874
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 875 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 930
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 931 ALKKYTYG 938
>gi|289449229|dbj|BAI77478.1| pumilio [Bombyx mori]
Length = 416
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 140/314 (44%), Gaps = 33/314 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q +
Sbjct: 93 QHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQ 152
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
K+ L ++ +GS ++K ++ + PP L HV+ +K
Sbjct: 153 KVRGH---VLNLALQMYGSRVIQKALESI---PPEQQQEVVRELDGHVLKCVK------- 199
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L+ H GC + +++ + +
Sbjct: 200 -DQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPV 258
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L+ + + L + GNYVVQHVL + A+RG + LS K S VV+K
Sbjct: 259 LNELHAHTDQLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKC 318
Query: 232 LKY--QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ + +N +++EL N + + + D++ NYV+Q + V Q ++ +H K
Sbjct: 319 VTHATRNERALLIDELCGFNDNALHVMMKDQFANYVVQKMIDVAEPTQRKVLMH-----K 373
Query: 287 LQQHLAALRVMKYG 300
++ H+ +LR YG
Sbjct: 374 IRPHIGSLRKYTYG 387
>gi|334313569|ref|XP_003339931.1| PREDICTED: pumilio homolog 2 isoform 2 [Monodelphis domestica]
Length = 1002
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 676 QHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLALAT 735
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 736 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 790
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + +L + +
Sbjct: 791 QKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEELHQHTE 850
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 851 QLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCVSHASRAER 910
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR L+ K++ H+
Sbjct: 911 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKVLMHKIRPHV 964
Query: 292 AALRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 965 TTLRKYTYGKHILVKLEK 982
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 666 LGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 725
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
+ A+ +RGH + L+L G V+QK L+ + + +V+EL +L+ D
Sbjct: 726 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKEL--DGHVLKCVKD 783
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 784 QNGNHVVQKCI 794
>gi|126305609|ref|XP_001369426.1| PREDICTED: pumilio homolog 2 isoform 1 [Monodelphis domestica]
Length = 1082
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 756 QHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLALAT 815
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 816 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 870
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + +L + +
Sbjct: 871 QKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEELHQHTE 930
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 931 QLVQDQYGNYVIQHVLEHGRPDDKSKIVAEIRGKVLALSQHKFASNVVEKCVSHASRAER 990
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR L+ K++ H+
Sbjct: 991 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKVLMHKIRPHV 1044
Query: 292 AALRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1045 TTLRKYTYGKHILVKLEK 1062
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 746 LGHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 805
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
+ A+ +RGH + L+L G V+QK L+ + + +V+EL +L+ D
Sbjct: 806 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISPDQQNEMVKEL--DGHVLKCVKD 863
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q +
Sbjct: 864 QNGNHVVQKCI 874
>gi|303391583|ref|XP_003074021.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303303170|gb|ADM12661.1| Puf RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 528
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 23/275 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q K+ S + F + EL + +G +V K I E + ++I
Sbjct: 227 QEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNYVVQKIIPLLTEGERTILIT 286
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q L SV +G V+KL+ V + +L V L L + + G+ VI
Sbjct: 287 KLVGQIHLL---SVHPYGCRVVQKLVDVSSDVDFILEEVKGNLLELIE----DQNGNHVI 339
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + K I Q E+ L+LA H+ GC + ++ K K I+ ++ N
Sbjct: 340 QKCIEKCKDRK--IILQQFSENSLFLATHKYGCRVIQRMLEFCKKDEIKGIVEVLIGNIK 397
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + GNYV+QH+L + E +I+ I + Y +LS K S VV++ +K N
Sbjct: 398 TLVDDQYGNYVIQHILAVGKEEERNLVIERI---IEKSY-ELSKCKFSSNVVEQCVKLSN 453
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQ 265
+ +E + + + +D YGNYV+Q
Sbjct: 454 NGQREQFLEKFLEPVGGKPGMYSMCTDMYGNYVVQ 488
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
KN F E C+ ++ ++G + +D++ + I A+ LS + GNY
Sbjct: 208 KNIFGGNTMKEICINVSKDQEGSRCIQRKMDSISREEISWFFNNIVEAASELSANLFGNY 267
Query: 191 VVQHVLNLEDPFLIDA----ICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELL 246
VVQ ++ P L + + L G LS+ G VVQK + + V +I+EE+
Sbjct: 268 VVQKII----PLLTEGERTILITKLVGQIHLLSVHPYGCRVVQKLVDVSSDVDFILEEVK 323
Query: 247 NSDQILQVASDKYGNYVIQTAL 268
+ +L++ D+ GN+VIQ +
Sbjct: 324 GN--LLELIEDQNGNHVIQKCI 343
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + +D S IL + N L ++GN+V+Q + I
Sbjct: 295 LSVHPYGCRVVQKLVD--VSSDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRKII 352
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYV 263
F+ + L+ K G V+Q+ L++ ++ + IVE L+ + I + D+YGNYV
Sbjct: 353 LQQFSENSLF--LATHKYGCRVIQRMLEFCKKDEIKGIVEVLIGN--IKTLVDDQYGNYV 408
Query: 264 IQTALVETMRQDRLSVHQRLVTK 286
IQ L ++R V +R++ K
Sbjct: 409 IQHILAVGKEEERNLVIERIIEK 431
>gi|11139702|gb|AAG31805.1|AF315590_1 Pumilio 2 [Mus musculus]
Length = 1066
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 854
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 855 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 914
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 915 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 974
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 975 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1028
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1029 TTLRKYTYGKH 1039
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 870
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 871 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 924
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 925 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 984
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 985 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1044
Query: 232 LKY 234
KY
Sbjct: 1045 EKY 1047
>gi|237649070|ref|NP_109648.2| pumilio homolog 2 isoform 1 [Mus musculus]
gi|237649081|ref|NP_001153691.1| pumilio homolog 2 isoform 1 [Mus musculus]
gi|41688655|sp|Q80U58.2|PUM2_MOUSE RecName: Full=Pumilio homolog 2
gi|13919630|gb|AAK21966.1| PUM1 [Mus musculus]
gi|148665992|gb|EDK98408.1| pumilio 2 (Drosophila) [Mus musculus]
Length = 1066
Score = 79.0 bits (193), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 854
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 855 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 914
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 915 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 974
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 975 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1028
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1029 TTLRKYTYGKH 1039
Score = 41.2 bits (95), Expect = 0.55, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 870
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 871 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 924
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 925 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 984
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 985 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1044
Query: 232 LKY 234
KY
Sbjct: 1045 EKY 1047
>gi|297833816|ref|XP_002884790.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
gi|297330630|gb|EFH61049.1| hypothetical protein ARALYDRAFT_897212 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 144/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + +F + + LM+ +G +V KF E Q + ++
Sbjct: 680 GSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTNKQRKELAEQV 739
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
T L S+ +G ++K ++VV L ++ L +M + G+ V
Sbjct: 740 TGH---VLALSLQMYGCRVIQKALEVVE-----LEQQARIVQELDGSVMKCVHDQNGNHV 791
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISVN 178
I KC+E FI + L L+ H GC + ++++ ++ I+ I +
Sbjct: 792 IQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIMEEIMDS 851
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L++ + GNYV+QH++ P I L G V +S K S VV+K L +
Sbjct: 852 VCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPE 911
Query: 239 --HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D +GNYV+Q L ET L++ ++++++ HL
Sbjct: 912 ERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVL-ETCNDQSLAL---ILSRIKVHLN 967
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 968 ALKRYTYG 975
>gi|351699449|gb|EHB02368.1| Pumilio-like protein 2 [Heterocephalus glaber]
Length = 1059
Score = 78.6 bits (192), Expect = 3e-12, Method: Composition-based stats.
Identities = 70/311 (22%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 731 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 790
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 791 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 847
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 848 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 907
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYVVQHVL P + +RG + LS K S VV+K + + +
Sbjct: 908 QLVQDQYGNYVVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKCVTHASRAER 967
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 968 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMV------DMAEPAQRKIIMHKIRPHI 1021
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1022 TTLRKYTYGKH 1032
Score = 40.4 bits (93), Expect = 0.95, Method: Composition-based stats.
Identities = 47/243 (19%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 805 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 863
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+
Sbjct: 864 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNY 917
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ LE + L L+ H+ + + + + R ++ +
Sbjct: 918 VVQHVLEHGRPEDRSRVVSEVRGEVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 977
Query: 179 -------AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 978 NDGPHSALYTMMKDQYANYVVQKMVDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 1037
Query: 232 LKY 234
KY
Sbjct: 1038 EKY 1040
>gi|302855378|ref|XP_002959184.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
gi|300255440|gb|EFJ39746.1| hypothetical protein VOLCADRAFT_70487 [Volvox carteri f.
nagariensis]
Length = 409
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 20/304 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+++QE S +D F V +LM+ +G +V KF+E A I
Sbjct: 88 QDGSRFVQENFESLRPEEIDAAFNDVLPHLLQLMTDMFGNYVVQKFLEHGTPEHRARIAN 147
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I L S+ FG +++K ++V + + ++S L + + GS VI
Sbjct: 148 AIQGN---VLSLSLQLFGCRTMQKALEVFTEDQQV--DIVSELNGHVMRCVCDQNGSHVI 202
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNA 179
KC+E H + + + + L+ H GC + + + ++ RR+ ++ I A
Sbjct: 203 QKCIEYVPPHHSAGLLDNIVTCVVPLSTHLHGCRIIRHILKYVRDQRRRAAVMADILGAA 262
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV- 238
L++ + GNYV+QHVL P +I +L V LS+ K S V++K L + +
Sbjct: 263 VQLAQDQYGNYVIQHVLERGTPEEKSSIIRSLSATVVQLSMHKFASNVIEKCLIHGSTAD 322
Query: 239 -HYIVEELLN------------SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVT 285
I+ +L SD + + + +GNYV+Q L + R ++ R+
Sbjct: 323 RDLIINRMLGAQTLQIQLETGYSDPVQGMMRNPFGNYVVQKVLEVCTDEQREAMLARVRM 382
Query: 286 KLQQ 289
+L +
Sbjct: 383 QLHE 386
>gi|348513123|ref|XP_003444092.1| PREDICTED: pumilio homolog 1-like [Oreochromis niloticus]
Length = 1163
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 140/310 (45%), Gaps = 16/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL S +F + ++LM +G +V KF E + Q +
Sbjct: 835 QHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 894
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 895 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV 951
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI +A L+ H GC + +++ + IL + +
Sbjct: 952 QKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE 1011
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL I +RG+ + LS K S VV+K + + +
Sbjct: 1012 QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAER 1071
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + + + + D+Y NYV+Q + V Q ++ +H K++ H++
Sbjct: 1072 AVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHIS 1126
Query: 293 ALRVMKYGSN 302
LR YG +
Sbjct: 1127 TLRKYTYGKH 1136
>gi|357443169|ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4 [Medicago truncatula]
Length = 1176
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 33/320 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + K+F + LM+ +G +V KF E +SQ + ++
Sbjct: 656 GSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFGNYVIQKFFEHGTDSQRKELANQL 715
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T L S+ +G ++K ++VV Q ++ + A+ + + + G+ VI
Sbjct: 716 TGH---VLPLSLQMYGCRVIQKALEVVDVDQQSQMVSELSGAIMKCVR----DQNGNHVI 768
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNA 179
KC+E ++ FI + + L+ H GC + +++ + ++I + I +
Sbjct: 769 QKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEHCDDLKTQEIIMEEIMQSV 828
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
+L++ + GNYV+QH+L P + L G V +S K S V++K L + +
Sbjct: 829 CTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQKFASNVIEKCLAFGSPEE 888
Query: 240 Y--IVEELLNSD------QILQVAS-----------DKYGNYVIQTALVETMRQDRLSVH 280
+V E+L + Q QV D +GNYV+Q L ET L +
Sbjct: 889 RQILVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNYVVQKVL-ETCDDQSLEL- 946
Query: 281 QRLVTKLQQHLAALRVMKYG 300
++++++ HL AL+ YG
Sbjct: 947 --ILSRIKVHLNALKRYTYG 964
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 8/174 (4%)
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 188
N F ++H + + + G + ++ + +I I +A +L G
Sbjct: 633 NKTKPFELSDIIDHVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEILPHARALMTDVFG 692
Query: 189 NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELL 246
NYV+Q + L GH + LSL G V+QK L+ + +V EL
Sbjct: 693 NYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSEL- 751
Query: 247 NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
S I++ D+ GN+VIQ +E++ Q+R+ Q ++T + AL YG
Sbjct: 752 -SGAIMKCVRDQNGNHVIQKC-IESVPQNRI---QFIITSFYGQVVALSTHPYG 800
>gi|449328595|gb|AGE94872.1| RNA-binding protein [Encephalitozoon cuniculi]
Length = 530
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q K+ S + F + EL + +G +V K I E + A +I
Sbjct: 229 QEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEERARLIA 288
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q L SV +G V+KL+ V + +L V L L + + G+ VI
Sbjct: 289 KLAKQINLL---SVHPYGCRVVQKLVDVSSDVDFILEEVRDNLLELIE----DQNGNHVI 341
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + + I Q E+ L+LA H+ GC + ++ + K I+ ++ N
Sbjct: 342 QKCIEKCKDR--NIILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEVLISNIK 399
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + GNYV+QH+L + E +I+ I + Y +LS K S VV++ +K N
Sbjct: 400 TLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQCVKLSN 455
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQ---TALVETMRQDRLSVHQRLVTKL 287
+ +E + + + + D YGNYV+Q + E +R++ S + V L
Sbjct: 456 NGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRPFVRDL 515
Query: 288 QQHLAALRVM 297
++ A ++
Sbjct: 516 KKSPFARHIL 525
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
C+ ++ ++G + +D++ + + I A LS + GNYV+Q ++ P
Sbjct: 222 CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKII----PL 277
Query: 203 LID---AICFALRGHYVD-LSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDK 258
L + A A ++ LS+ G VVQK + + V +I+EE+ D +L++ D+
Sbjct: 278 LTEEERARLIAKLAKQINLLSVHPYGCRVVQKLVDVSSDVDFILEEV--RDNLLELIEDQ 335
Query: 259 YGNYVIQTAL 268
GN+VIQ +
Sbjct: 336 NGNHVIQKCI 345
>gi|452846127|gb|EME48060.1| hypothetical protein DOTSEDRAFT_69859 [Dothistroma septosporum
NZE10]
Length = 945
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 78/295 (26%), Positives = 137/295 (46%), Gaps = 35/295 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S D++F + LM+ +G +V KF E + S ++
Sbjct: 544 QHGSRFIQTKLETANSDEKDRVFREIEPNAIPLMTDVFGNYVIQKFFEHGDMSHKKILAK 603
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLY----HVMSALKRLFKFLMMTK 114
K+ QDQ++ L S +G V+K + +V Q L+ HV+ +K +
Sbjct: 604 KM--QDQVYSL-SKQMYGCRVVQKALDHVLVEQQQQLVAELKGHVLDCVK--------DQ 652
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI K +E + FI +A + L+ H GC + ++ ++ I+
Sbjct: 653 NGNHVIQKAIERCHPSTIAFIIEAFVGQVPSLSIHAYGCRVIQRCLEKCDLPQKSMIMAE 712
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLED----PFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
+ + ++ + GNYVVQHV+ ++ ++D + L G+ S K S VV+K
Sbjct: 713 LLQSIHTMISDQFGNYVVQHVVAHDEGECRSHVLDIVMNNLEGY----SKHKFASNVVEK 768
Query: 231 FLKYQNA--VHYIVEELLNSDQ--------ILQVASDKYGNYVIQTALVETMRQD 275
L+ + H +V L+N+ Q I+ + D +GNYVIQ L QD
Sbjct: 769 CLEKSDERWRHEVVVRLVNNSQRRIEGESPIVLMIKDNFGNYVIQKLLDTLNAQD 823
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 65/149 (43%), Gaps = 7/149 (4%)
Query: 159 FIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDL 218
F N K R + L I + A S + G+ +Q L + D + + + + L
Sbjct: 519 FKSNTKTKRYE--LRDIYDHIAEFSGDQHGSRFIQTKLETANSDEKDRVFREIEPNAIPL 576
Query: 219 SLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLS 278
G++V+QKF ++ + H + DQ+ ++ YG V+Q AL + + +
Sbjct: 577 MTDVFGNYVIQKFFEHGDMSHKKILAKKMQDQVYSLSKQMYGCRVVQKALDHVLVEQQ-- 634
Query: 279 VHQRLVTKLQQHLAALRVMKYGSNKEIQK 307
Q+LV +L+ H+ V N IQK
Sbjct: 635 --QQLVAELKGHVLDC-VKDQNGNHVIQK 660
>gi|238880509|gb|EEQ44147.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 783
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 38/299 (12%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ +L + + I +++++ ELM +G ++ K N Q ++
Sbjct: 455 QHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMINLEQRLVL 510
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKR------- 105
I + + ++LF +A +D G+ S++KLI V+ + + LY + L R
Sbjct: 511 INQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHV 567
Query: 106 ----LFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 161
L KF ++ +S + ++N FI+ + LY+ACH GC L +D
Sbjct: 568 VQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLD 627
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL---------EDPFLIDAICFALR 212
+ +Q+ I+ + LS GNYVVQ+VLN D +ID I ++
Sbjct: 628 YGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIK 687
Query: 213 GHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ---ILQVASDKYGNYVIQTAL 268
+++ LSL K GS V++K LK + +++ L+ D Q+ +D +GNYV+QT+L
Sbjct: 688 SNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSL 746
>gi|348574640|ref|XP_003473098.1| PREDICTED: pumilio homolog 2 isoform 2 [Cavia porcellus]
Length = 989
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 663 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLALAT 722
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 723 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 771
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 772 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 831
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 832 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 891
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 892 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 945
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 946 KIRPHITTLRKYTYGKH 962
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 653 LGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 712
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
+ A+ +RGH + L+L G V+QK L+ + +V+EL +L+ D
Sbjct: 713 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKEL--DGHVLKCVKD 770
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+V+Q +E ++ L Q ++ + + L YG
Sbjct: 771 QNGNHVVQKC-IECVQPQSL---QFIIDAFKGQVFVLSTHPYG 809
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 737 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 794
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 795 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 849
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 850 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 909
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 910 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 969
Query: 234 Y 234
Y
Sbjct: 970 Y 970
>gi|348574638|ref|XP_003473097.1| PREDICTED: pumilio homolog 2 isoform 1 [Cavia porcellus]
Length = 1068
Score = 78.2 bits (191), Expect = 4e-12, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 742 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLALAT 801
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 802 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 850
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 851 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 910
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 911 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 970
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 971 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1024
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1025 KIRPHITTLRKYTYGKH 1041
Score = 39.3 bits (90), Expect = 2.1, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 8/163 (4%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + R+ + + I A L GNYV+Q
Sbjct: 732 LGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFG 791
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
+ A+ +RGH + L+L G V+QK L+ + +V+EL +L+ D
Sbjct: 792 NLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKEL--DGHVLKCVKD 849
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+V+Q +E ++ L Q ++ + + L YG
Sbjct: 850 QNGNHVVQKC-IECVQPQSL---QFIIDAFKGQVFVLSTHPYG 888
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 816 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 873
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 874 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 928
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 929 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 988
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 989 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1048
Query: 234 Y 234
Y
Sbjct: 1049 Y 1049
>gi|11991652|gb|AAG42319.1|AF321909_1 pumilio 1 [Mus musculus]
Length = 1189
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 861 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|74206258|dbj|BAE24888.1| unnamed protein product [Mus musculus]
Length = 1189
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 861 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|227430386|ref|NP_001153077.1| pumilio homolog 1 isoform 4 [Mus musculus]
gi|74145600|dbj|BAE36209.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 764 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 821
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 822 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 879
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 880 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 939
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 940 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 999
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1000 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1054
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1055 ATLRKYTYGKH 1065
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 838 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 896
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 897 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 950
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 951 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1010
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1011 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1070
Query: 232 LKY 234
KY
Sbjct: 1071 EKY 1073
>gi|227430380|ref|NP_109647.2| pumilio homolog 1 isoform 1 [Mus musculus]
gi|41688656|sp|Q80U78.2|PUM1_MOUSE RecName: Full=Pumilio homolog 1
gi|148698187|gb|EDL30134.1| pumilio 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1189
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 861 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|354472361|ref|XP_003498408.1| PREDICTED: pumilio homolog 1 isoform 2 [Cricetulus griseus]
Length = 1091
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 763 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 820
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 821 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 878
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 879 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 938
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 939 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 998
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 999 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1053
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1054 ATLRKYTYGKH 1064
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 837 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 895
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 896 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 949
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 950 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1009
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1010 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1069
Query: 232 LKY 234
KY
Sbjct: 1070 EKY 1072
>gi|348571014|ref|XP_003471291.1| PREDICTED: pumilio homolog 1-like isoform 2 [Cavia porcellus]
Length = 1092
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 764 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 821
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 822 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 879
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 880 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 939
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 940 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 999
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1000 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1054
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1055 ATLRKYTYGKH 1065
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 838 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 896
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 897 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 950
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 951 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1010
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1011 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1070
Query: 232 LKY 234
KY
Sbjct: 1071 EKY 1073
>gi|157822487|ref|NP_001102154.1| pumilio homolog 1 [Rattus norvegicus]
gi|149024100|gb|EDL80597.1| pumilio 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 1189
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 861 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|148698188|gb|EDL30135.1| pumilio 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 1212
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 884 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 941
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 942 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 999
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1000 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1059
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1060 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1119
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1120 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1174
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1175 ATLRKYTYGKH 1185
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 958 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1016
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1017 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1070
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1071 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1130
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1131 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1190
Query: 232 LKY 234
KY
Sbjct: 1191 EKY 1193
>gi|227430384|ref|NP_001153076.1| pumilio homolog 1 isoform 3 [Mus musculus]
gi|29165749|gb|AAH48174.1| Pumilio 1 (Drosophila) [Mus musculus]
gi|74208613|dbj|BAE37564.1| unnamed protein product [Mus musculus]
Length = 1188
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 860 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 975
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 976 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1035
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1036 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1095
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1096 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1150
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1151 ATLRKYTYGKH 1161
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 934 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 992
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 993 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1046
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1047 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1106
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1107 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1166
Query: 232 LKY 234
KY
Sbjct: 1167 EKY 1169
>gi|28972067|dbj|BAC65487.1| mKIAA0099 protein [Mus musculus]
Length = 1218
Score = 78.2 bits (191), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 890 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 947
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 948 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1005
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1006 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1065
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1066 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1125
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1126 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1180
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1181 ATLRKYTYGKH 1191
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 964 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1022
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1023 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1076
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1077 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1136
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1137 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1196
Query: 232 LKY 234
KY
Sbjct: 1197 EKY 1199
>gi|68476217|ref|XP_717758.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
gi|46439485|gb|EAK98802.1| hypothetical protein CaO19.5381 [Candida albicans SC5314]
Length = 783
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 38/299 (12%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ +L + + I +++++ ELM +G ++ K N Q ++
Sbjct: 455 QHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMINLEQRLVL 510
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKR------- 105
I + + ++LF +A +D G+ S++KLI V+ + + LY + L R
Sbjct: 511 INQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHV 567
Query: 106 ----LFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 161
L KF ++ +S + ++N FI+ + LY+ACH GC L +D
Sbjct: 568 VQKILTKFNTISSDSNSSDSNRDGAQHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLD 627
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL---------EDPFLIDAICFALR 212
+ +Q+ I+ + LS GNYVVQ+VLN D +ID I ++
Sbjct: 628 YGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIK 687
Query: 213 GHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ---ILQVASDKYGNYVIQTAL 268
+++ LSL K GS V++K LK + +++ L+ D Q+ +D +GNYV+QT+L
Sbjct: 688 SNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSL 746
>gi|291399425|ref|XP_002716109.1| PREDICTED: pumilio 1-like isoform 2 [Oryctolagus cuniculus]
Length = 1092
Score = 77.8 bits (190), Expect = 5e-12, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 764 QHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 821
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 822 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHV 879
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 880 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 939
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 940 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 999
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1000 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1054
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1055 ATLRKYTYGKH 1065
Score = 38.1 bits (87), Expect = 4.8, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 838 GCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 896
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 897 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 950
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 951 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1010
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1011 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1070
Query: 232 LKY 234
KY
Sbjct: 1071 EKY 1073
>gi|5106561|gb|AAD39751.1|AF128626_1 RNA binding protein PufA [Dictyostelium discoideum]
Length = 795
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 22/309 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+K+ + +F V LM+ +G +V KF E Q ++ K+
Sbjct: 483 GSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRILADKL 542
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L ++ +G ++K I+ + +L ++ L + + G+ VI K
Sbjct: 543 SGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTDQNGNHVIQK 597
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E H FI + H LA H GC + +++ + IL + A SL
Sbjct: 598 CIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPILDELMRCAVSL 657
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--Y 240
+ + GNYV+QHVL P AI L+G +LS K S V++K +++
Sbjct: 658 VQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQHGCTAERIL 717
Query: 241 IVEELL-------NSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHL 291
I+ E+L +S+ +L++ D Y NYVIQ L VE ++D ++ ++Q +
Sbjct: 718 IINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIVEPAQRD------MIINRIQPFV 771
Query: 292 AALRVMKYG 300
L+ + G
Sbjct: 772 PTLKKVTPG 780
>gi|345567293|gb|EGX50227.1| hypothetical protein AOL_s00076g302 [Arthrobotrys oligospora ATCC
24927]
Length = 880
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 21/310 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + S D +F + +LM+ +G +V KF E N+ Q A++
Sbjct: 522 QHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKFFEHGNQLQKAMLAK 581
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ + Q L+ + + + K + G+
Sbjct: 582 QM---EGHVLKLSLQMYGCRVVQKALEHVLTEQQATLIKEIDGNVLKCVK----DQNGNH 634
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DFI +A LA H GC + +++ + IL +++
Sbjct: 635 VVQKAIERVPAQHIDFILKAFKGQVQSLATHPYGCRVIQRMLEHCDEPAQSSILQELNMC 694
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+L + + GNYV QHV+ P I + H + S K S VV+K ++Y N
Sbjct: 695 LYALIQDQYGNYVTQHVIEHGKPEDRAKIIHVVSQHVIQFSKHKFASNVVEKSIQYGNEK 754
Query: 239 HY-------IVEELLNSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ + LQ D+YGNYVIQ L +DR + L+ ++
Sbjct: 755 QRKEVLGTITAPKSADGPPPLQTLMKDQYGNYVIQKLLFLLDEEDRDT----LIEAIKPQ 810
Query: 291 LAALRVMKYG 300
LA L+ YG
Sbjct: 811 LANLKRFSYG 820
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + I I NA L GNYV+Q +
Sbjct: 514 HVVEFSGDQHGSRFIQQKLETATSDEKDVIFSEIRPNALQLMTDVFGNYVIQKFFEHGNQ 573
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ + GH + LSL G VVQK L++ Q A +++E+ +L+ D
Sbjct: 574 LQKAMLAKQMEGHVLKLSLQMYGCRVVQKALEHVLTEQQAT--LIKEI--DGNVLKCVKD 629
Query: 258 KYGNYVIQTAL 268
+ GN+V+Q A+
Sbjct: 630 QNGNHVVQKAI 640
>gi|19074973|ref|NP_586479.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
gi|19069698|emb|CAD26083.1| RNA-BINDING PROTEIN OF THE PUMILIO FAMILY) [Encephalitozoon
cuniculi GB-M1]
Length = 530
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 143/310 (46%), Gaps = 26/310 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q K+ S + F + EL + +G +V K I E + A +I
Sbjct: 229 QEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKIIPLLTEEERARLIA 288
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q L SV +G ++KL+ V + +L V L L + + G+ VI
Sbjct: 289 KLAKQINLL---SVHPYGCRVIQKLVDVSSDVDFILEEVRDNLLELIE----DQNGNHVI 341
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + + I Q E+ L+LA H+ GC + ++ + K I+ ++ N
Sbjct: 342 QKCIEKCKDR--NIILQQFSENSLFLATHKYGCRVIQRMLEFCREDEIKNIVEVLISNIK 399
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + GNYV+QH+L + E +I+ I + Y +LS K S VV++ +K N
Sbjct: 400 TLVDDQYGNYVIQHILAVGKEDEKNLVIEKI---IEKSY-ELSRCKFSSNVVEQCVKLSN 455
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQ---TALVETMRQDRLSVHQRLVTKL 287
+ +E + + + + D YGNYV+Q + E +R++ S + V L
Sbjct: 456 NGQRERFLAKFLEPVGSKPGMYSMCVDMYGNYVVQRLYDSSGENIRREMKSALRPFVRDL 515
Query: 288 QQHLAALRVM 297
++ A ++
Sbjct: 516 KKSPFARHIL 525
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 65/130 (50%), Gaps = 10/130 (7%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
C+ ++ ++G + +D++ + + I A LS + GNYV+Q ++ P
Sbjct: 222 CVSISKDQEGSRCIQRKMDSISRAEISWFFNNIVDAAPELSANLFGNYVIQKII----PL 277
Query: 203 LID---AICFALRGHYVD-LSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDK 258
L + A A ++ LS+ G V+QK + + V +I+EE+ D +L++ D+
Sbjct: 278 LTEEERARLIAKLAKQINLLSVHPYGCRVIQKLVDVSSDVDFILEEV--RDNLLELIEDQ 335
Query: 259 YGNYVIQTAL 268
GN+VIQ +
Sbjct: 336 NGNHVIQKCI 345
>gi|20465637|gb|AAM20149.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
Length = 972
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 28/311 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + S + ++ + LM+ +G +V KF E L +
Sbjct: 648 GSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEH------GLPPQRR 701
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
D+LF L S+ +G ++K I+VV L + +K L +M + G
Sbjct: 702 ELADKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNG 756
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLI 175
+ V+ KC+E +FI + + L+ H GC + +++ + +++ I
Sbjct: 757 NHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEI 816
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ L++ + GNYV+QHVL P I L G V +S K S VV+K L +
Sbjct: 817 MSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 876
Query: 236 NAV--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++V E+L + ++ LQ + D++ NYV+Q L Q R + ++ +++
Sbjct: 877 GPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILGRIKV 932
Query: 290 HLAALRVMKYG 300
HL AL+ YG
Sbjct: 933 HLNALKKYTYG 943
>gi|15227051|ref|NP_180482.1| pumilio 2 [Arabidopsis thaliana]
gi|334184556|ref|NP_001189630.1| pumilio 2 [Arabidopsis thaliana]
gi|75217075|sp|Q9ZW06.1|PUM2_ARATH RecName: Full=Pumilio homolog 2; Short=APUM-2; Short=AtPUM2
gi|3980413|gb|AAC95216.1| putative pumilio/Mpt5 family RNA-binding protein [Arabidopsis
thaliana]
gi|330253126|gb|AEC08220.1| pumilio 2 [Arabidopsis thaliana]
gi|330253127|gb|AEC08221.1| pumilio 2 [Arabidopsis thaliana]
Length = 972
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 143/311 (45%), Gaps = 28/311 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + S + ++ + LM+ +G +V KF E L +
Sbjct: 648 GSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVIQKFFEH------GLPPQRR 701
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
D+LF L S+ +G ++K I+VV L + +K L +M + G
Sbjct: 702 ELADKLFDNVLPLSLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNG 756
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN-MKGSRRKQILHLI 175
+ V+ KC+E +FI + + L+ H GC + +++ + +++ I
Sbjct: 757 NHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEI 816
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ L++ + GNYV+QHVL P I L G V +S K S VV+K L +
Sbjct: 817 MSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFG 876
Query: 236 NAV--HYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++V E+L + ++ LQ + D++ NYV+Q L Q R + ++ +++
Sbjct: 877 GPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILGRIKV 932
Query: 290 HLAALRVMKYG 300
HL AL+ YG
Sbjct: 933 HLNALKKYTYG 943
>gi|68476406|ref|XP_717664.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
gi|46439384|gb|EAK98702.1| hypothetical protein CaO19.12836 [Candida albicans SC5314]
Length = 783
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 144/299 (48%), Gaps = 38/299 (12%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ +L + + I +++++ ELM +G ++ K N Q ++
Sbjct: 455 QHGCRFLQRELINETNATLIFNEIYFKA----VELMIDPFGNYLIQKLFTMINLEQRLVL 510
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKR------- 105
I + + ++LF +A +D G+ S++KLI V+ + + LY + L R
Sbjct: 511 INQCS--NELFRIA-LDPHGTRSLQKLIDVIETNEEIEIITRNLYSNIVVLSRDLNGNHV 567
Query: 106 ----LFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFID 161
L KF ++ +S + ++N FI+ + LY+ACH GC L +D
Sbjct: 568 VQKILTKFNTISSDSNSSDSNRDGVQHQNQNQFIFDIIQANLLYIACHRHGCCVLQRCLD 627
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL---------EDPFLIDAICFALR 212
+ +Q+ I+ + LS GNYVVQ+VLN D +ID I ++
Sbjct: 628 YGNKQQCQQLSQEIAKHTIKLSLDPYGNYVVQYVLNKYSVGGDAQNTDNQVIDIIIQEIK 687
Query: 213 GHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ---ILQVASDKYGNYVIQTAL 268
+++ LSL K GS V++K LK + +++ L+ D Q+ +D +GNYV+QT+L
Sbjct: 688 SNFIQLSLHKFGSNVIEKCLKISSISKDLIDNLIVLDHGQAFNQLLNDPFGNYVLQTSL 746
>gi|357143524|ref|XP_003572951.1| PREDICTED: pumilio homolog 4-like [Brachypodium distachyon]
Length = 1010
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 146/310 (47%), Gaps = 26/310 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ---LALII 59
GS+++Q+KL + + + +F + LM+ +G +V KF E E+Q LA ++
Sbjct: 688 GSRFIQQKLETASTEEKNTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEAQKKQLASLL 747
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFL--MMTKPGS 117
Q S+ +G ++K ++VV + + AL+ + + + G+
Sbjct: 748 KGYVLQ------LSLQMYGCRVIQKALEVVG----VEHQTQMALELDGSIMKCVRDQNGN 797
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLIS 176
VI KC+E + FI A H + L+ H GC + +++ S + ++ I
Sbjct: 798 HVIQKCIECIPQERIQFIISAFYGHVVDLSTHPYGCRVIQRVLEHCDDESTQNAMMEEIM 857
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ L++ + GNYV+QHVL P +I L G V +S K S VV+K L +
Sbjct: 858 QSVVPLTQDQYGNYVIQHVLQYGKPEERTSIITQLAGQIVKMSQQKFASNVVEKCLSFGS 917
Query: 235 QNAVHYIVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
++ E+L + ++ LQ + D++ NYV+Q L +R + ++++++ H
Sbjct: 918 HEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDHNR----ELILSRIKVH 973
Query: 291 LAALRVMKYG 300
L AL+ YG
Sbjct: 974 LNALKRYTYG 983
>gi|90074793|dbj|BAD95609.2| pumilio-1 [Oncorhynchus mykiss]
Length = 1159
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 16/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL S +F + ++LM +G +V KF E + Q +
Sbjct: 831 QHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 890
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 891 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV 947
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI A L+ H GC + +++ + IL + +
Sbjct: 948 QKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTE 1007
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL I +RG+ + LS K S VV+K + + +
Sbjct: 1008 QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVSHASRAER 1067
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + + + + D+Y NYV+Q + V Q ++ +H K++ H++
Sbjct: 1068 AVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHIS 1122
Query: 293 ALRVMKYGSN 302
LR YG +
Sbjct: 1123 TLRKYTYGKH 1132
>gi|66814744|ref|XP_641551.1| RNA binding protein [Dictyostelium discoideum AX4]
gi|60469557|gb|EAL67547.1| RNA binding protein [Dictyostelium discoideum AX4]
Length = 785
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 22/309 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+K+ + +F V LM+ +G +V KF E Q ++ K+
Sbjct: 473 GSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRILADKL 532
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L ++ +G ++K I+ + +L ++ L + + G+ VI K
Sbjct: 533 SGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTDQNGNHVIQK 587
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E H FI + H LA H GC + +++ + IL + A SL
Sbjct: 588 CIEKIPTHLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAEKQVAPILDELMRCAVSL 647
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--Y 240
+ + GNYV+QHVL P AI L+G +LS K S V++K +++
Sbjct: 648 VQDQYGNYVIQHVLENGTPRDKSAIVCKLQGQIYNLSQHKFASNVIEKCVQHGCTAERIL 707
Query: 241 IVEELL-------NSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHL 291
I+ E+L +S+ +L++ D Y NYVIQ L VE ++D ++ ++Q +
Sbjct: 708 IINEILGDANSPNSSNVLLKILKDPYANYVIQKILDIVEPAQRD------MIINRIQPFV 761
Query: 292 AALRVMKYG 300
L+ + G
Sbjct: 762 PTLKKVTPG 770
>gi|356538984|ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + + LM+ +G +V KF E SQ + K+
Sbjct: 725 GSRFIQQKLETATTEEKNMVYQEIMPHSLALMTDVFGNYVVQKFFEHGLASQRRELANKL 784
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 785 LGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRCVRDQNGNHV 836
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E FI + + L+ H GC + +++ K +Q ++ I
Sbjct: 837 IQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGA 896
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P I L G V +S K S VV+K L +
Sbjct: 897 VSMLAQDQYGNYVVQHVLEHGKPHERSCIIKELAGKIVQMSQQKFASNVVEKCLTFGGPS 956
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL
Sbjct: 957 ERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLN 1012
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1013 ALKKYTYG 1020
>gi|410910802|ref|XP_003968879.1| PREDICTED: pumilio homolog 1-like [Takifugu rubripes]
Length = 1162
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 71/310 (22%), Positives = 139/310 (44%), Gaps = 16/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL S +F + ++LM +G +V KF E + Q +
Sbjct: 834 QHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 893
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 894 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV 950
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI A L+ H GC + +++ + IL + +
Sbjct: 951 QKCIECVQPHALHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE 1010
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL I +RG+ + LS K S VV+K + + +
Sbjct: 1011 QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAER 1070
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + + + + D+Y NYV+Q + V Q ++ +H K++ H++
Sbjct: 1071 AVLIDEVCSLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHIS 1125
Query: 293 ALRVMKYGSN 302
LR YG +
Sbjct: 1126 TLRKYTYGKH 1135
>gi|358369705|dbj|GAA86319.1| mRNA binding protein Pumilio 2 [Aspergillus kawachii IFO 4308]
Length = 932
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 75/312 (24%), Positives = 146/312 (46%), Gaps = 24/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + + +LM+ +G +V K E N++Q ++
Sbjct: 524 QHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 583
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ L S +G V+K ++ + Q ++ + S + R + + G+
Sbjct: 584 QMKGH---ILSLSTQMYGCRVVQKALEHILTDQQASMVKELESHVLRCVR----DQNGNH 636
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 637 VIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEHCEEVDRESILGELHAC 696
Query: 179 AASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
+ L + GNYV+QHV+ N ED I + + S K S VV+K ++Y +
Sbjct: 697 TSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVM-SQLLTYSKHKFASNVVEKSIEYGEE 755
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQ 288
+ ++ L + ++ ++ + D+YGNYVIQ L ++ +++ S L ++Q
Sbjct: 756 SQRRQMISTLTSVNERGDSPLISLMRDQYGNYVIQKILGQLDDTSEEKYS----LAVRIQ 811
Query: 289 QHLAALRVMKYG 300
L L+ YG
Sbjct: 812 PMLDQLKKFSYG 823
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 516 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQ 575
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL +L+ D+
Sbjct: 576 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKEL--ESHVLRCVRDQN 633
Query: 260 GNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
GN+VIQ A+ Q DRL+ H R++ ++ +H
Sbjct: 634 GNHVIQKAIERVPSQYVQFIINAFKGQVDRLATHPYGCRVIQRMLEH 680
>gi|223994913|ref|XP_002287140.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976256|gb|EED94583.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 300
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 28/295 (9%)
Query: 5 QYLQEKLSSGDSRILDKLFWVVSGFTF--ELMSGQYGRFVFGKFIESCNESQLALIILKI 62
Q L E S + IL++ G TF E M +G ++F K +E + +++ +
Sbjct: 25 QALDEDGPSAATAILNE------GLTFWAEAMVDPFGNYLFQKILERITPEERVILVKSV 78
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + + AS++ G+ SV+K+++ Q + AL+ L + G+ I +
Sbjct: 79 STR---LVNASLNLHGTRSVQKIVESKKQDTAAKI-LTDALEPSAARLCIDSHGNHAIQR 134
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
L FI+ A +A H GC + +D+ R ++ I + L
Sbjct: 135 ILLKLPYQYTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSVARSHLVTRIVEKSLEL 194
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIV 242
+ GNYVVQ+VL++ + AIC ++ G L++ K S V++K L + +
Sbjct: 195 MQDAYGNYVVQYVLDVCGDDEVHAICESVIGRVCLLAIQKFSSNVMEKCL--ERCTDRVR 252
Query: 243 EELLN----SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ---RLVTKLQQH 290
EE LN SD++ ++ D +GNYV+Q AL +S H RLV ++ H
Sbjct: 253 EEYLNELNDSDRLRELMMDPFGNYVVQRAL-------SVSTHAQAIRLVETMKPH 300
>gi|395508976|ref|XP_003758783.1| PREDICTED: pumilio homolog 2 isoform 2 [Sarcophilus harrisii]
Length = 1002
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 676 QHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLSLTT 735
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 736 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNDMVKELDGHVLKCVKDQNGNHVV 790
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + +L + +
Sbjct: 791 QKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPVLEELHQHTE 850
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 851 QLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAER 910
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR L+ K++ H+
Sbjct: 911 ALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPGQRKVLMHKIRPHV 964
Query: 292 AALRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 965 TTLRKYTYGKHILVKLEK 982
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S + + + G + + Q G V K IE L II
Sbjct: 750 GCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 807
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ V Q+ P V+ L + + L+ + G+ VI
Sbjct: 808 AFKGQVFVL-STHPYGCRVIQRILEHCTVEQTLP----VLEELHQHTEQLVQDQYGNYVI 862
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ I
Sbjct: 863 QHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAERALLIDEICCQND 922
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P + +R H L G ++ K K
Sbjct: 923 GPHSALYTMMKDQYANYVVQKMIDMAEPGQRKVLMHKIRPHVTTLRKYTYGKHILVKLEK 982
Query: 234 Y 234
Y
Sbjct: 983 Y 983
>gi|395508974|ref|XP_003758782.1| PREDICTED: pumilio homolog 2 isoform 1 [Sarcophilus harrisii]
Length = 1082
Score = 77.4 bits (189), Expect = 8e-12, Method: Composition-based stats.
Identities = 74/318 (23%), Positives = 140/318 (44%), Gaps = 20/318 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E N Q +
Sbjct: 756 QHGSRFIQQKLERATPTERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGNLDQKLSLTT 815
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 816 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNDMVKELDGHVLKCVKDQNGNHVV 870
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + +L + +
Sbjct: 871 QKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTVEQTLPVLEELHQHTE 930
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 931 QLVQDQYGNYVIQHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAER 990
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR L+ K++ H+
Sbjct: 991 ALLIDEICCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPGQRKVLMHKIRPHV 1044
Query: 292 AALRVMKYGSNKEIQKKK 309
LR YG + ++ +K
Sbjct: 1045 TTLRKYTYGKHILVKLEK 1062
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S + + + G + + Q G V K IE L II
Sbjct: 830 GCRVIQKALESISPDQQNDMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 887
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ V Q+ P V+ L + + L+ + G+ VI
Sbjct: 888 AFKGQVFVL-STHPYGCRVIQRILEHCTVEQTLP----VLEELHQHTEQLVQDQYGNYVI 942
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ I
Sbjct: 943 QHVLEHGRPDDKSKIVSEIRGKVLTLSQHKFASNVVEKCVSHASRAERALLIDEICCQND 1002
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P + +R H L G ++ K K
Sbjct: 1003 GPHSALYTMMKDQYANYVVQKMIDMAEPGQRKVLMHKIRPHVTTLRKYTYGKHILVKLEK 1062
Query: 234 Y 234
Y
Sbjct: 1063 Y 1063
>gi|242781200|ref|XP_002479753.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719900|gb|EED19319.1| mRNA binding protein Pumilio 2, putative [Talaromyces stipitatus
ATCC 10500]
Length = 943
Score = 77.0 bits (188), Expect = 9e-12, Method: Composition-based stats.
Identities = 76/313 (24%), Positives = 142/313 (45%), Gaps = 28/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +S D++F + +LM+ +G +V K E N+SQ ++
Sbjct: 528 QHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 587
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMTK 114
++ L S +G V+K ++ + A L HVM ++ +
Sbjct: 588 QMKTH---ILALSTQMYGCRVVQKALEHILTDQQAAMVKELDQHVMKCVR--------DQ 636
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI K +E FI A + LA H GC + +++ + R+ IL
Sbjct: 637 NGNHVIQKAIERVPTQHIRFIIDAFKGNVNKLATHPYGCRVIQRMLEHCETPDRESILAE 696
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ V L + GNYV+QHV+ + + ++ + + S K S VV+K +++
Sbjct: 697 LHVCTELLIPDQFGNYVIQHVIENGEEKDRSVMIKSVIKNVHNFSKHKFASNVVEKSIEF 756
Query: 235 -QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ + + LL + +L + D+YGNYVIQ L + +R + ++ ++
Sbjct: 757 GEESQRREIIRLLTAHNDRGESPLLALMRDQYGNYVIQKVLGQVKGSER----EMIIDEI 812
Query: 288 QQHLAALRVMKYG 300
+ L+ L+ YG
Sbjct: 813 KPLLSQLKKFSYG 825
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 11/164 (6%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ + Q+ I N L GNYVVQ + +
Sbjct: 520 HIVEFSGDQHGSRFIQQKLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 579
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ ++ H + LS G VVQK L++ Q A +V+EL +++ D
Sbjct: 580 SQKRILANQMKTHILALSTQMYGCRVVQKALEHILTDQQAA--MVKEL--DQHVMKCVRD 635
Query: 258 KYGNYVIQTALVETMRQD---RLSVHQRLVTKLQQHLAALRVMK 298
+ GN+VIQ A+ Q + + V KL H RV++
Sbjct: 636 QNGNHVIQKAIERVPTQHIRFIIDAFKGNVNKLATHPYGCRVIQ 679
>gi|168030344|ref|XP_001767683.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681003|gb|EDQ67434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1085
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 15/277 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E Q +
Sbjct: 813 QHGSRFIQQKLETATLEDKNMVFQEVLPRALVLMTDVFGNYVIQKFFEHGTHQQRRELAS 872
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ Q L+ S+ +G ++K ++V V Q L+ + + R + + G+
Sbjct: 873 KLEGQ---VLVLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGNVMRCVR----DQNGNH 925
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLISV 177
VI KC+E K FI A + L+ H GC + +++ ++K I+ I
Sbjct: 926 VIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILR 985
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ +L++ + GNYVVQHVL I L G V +S K S VV+K L+Y
Sbjct: 986 STCTLAQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQMSQHKFASNVVEKCLEYGGP 1045
Query: 238 V--HYIVEELL---NSDQILQVASDKYGNYVIQTALV 269
V +++E+L + ++ LQV + N ++ +V
Sbjct: 1046 VERQILIDEMLGLTDENEPLQVLCELSSNSLVSGWVV 1082
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 85/196 (43%), Gaps = 9/196 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + + L L+ GC + ++ + ++
Sbjct: 845 LMTDVFGNYVIQKFFEHGTHQQRRELASKLEGQVLVLSLQMYGCRVIQKALEVVDVDQQT 904
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
Q++ + N R ++GN+V+Q + P I I A V LS G V+Q
Sbjct: 905 QLVSELDGNVMRCVRDQNGNHVIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQ 964
Query: 230 KFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ L++ + I+EE+L S L A D+YGNYV+Q L +R ++TK
Sbjct: 965 RVLEHCTDEQKQKGIMEEILRSTCTL--AQDQYGNYVVQHVLEHGRDHER----SEIITK 1018
Query: 287 LQQHLAALRVMKYGSN 302
L + + K+ SN
Sbjct: 1019 LAGQIVQMSQHKFASN 1034
>gi|134082176|emb|CAK42288.1| unnamed protein product [Aspergillus niger]
Length = 950
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/312 (23%), Positives = 146/312 (46%), Gaps = 24/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + + +LM+ +G +V K E N++Q ++
Sbjct: 542 QHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 601
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ L S +G V+K ++ + Q ++ + + + R + + G+
Sbjct: 602 QMKGH---ILSLSTQMYGCRVVQKALEHILTDQQASMVKELENHVLRCVR----DQNGNH 654
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 655 VIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELHAC 714
Query: 179 AASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
+ L + GNYV+QHV+ N ED I + + S K S VV+K ++Y +
Sbjct: 715 TSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVM-SQLLTYSKHKFASNVVEKSIEYGEE 773
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQ 288
+ ++ L + ++ ++ + D+YGNYVIQ L ++ +++ S L ++Q
Sbjct: 774 SQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQLDDTSEEKYS----LAVRIQ 829
Query: 289 QHLAALRVMKYG 300
L L+ YG
Sbjct: 830 PMLDQLKKFSYG 841
Score = 47.4 bits (111), Expect = 0.009, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 534 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 593
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 594 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 651
Query: 260 GNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 652 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 698
>gi|327261367|ref|XP_003215502.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2-like [Anolis
carolinensis]
Length = 1180
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 854 QHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSIDQKLALAT 913
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 914 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 968
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 969 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 1028
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 1029 QLVQDQYGNYVIQHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCVTHASRAER 1088
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 1089 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1142
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1143 TTLRKYTYGKH 1153
Score = 37.7 bits (86), Expect = 7.0, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S +++ + G + + Q G V K IE L II
Sbjct: 928 GCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 985
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 986 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 1040
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 1041 QHVLEHGRPEDKSKIVTEIRGKVLTLSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 1100
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 1101 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1160
Query: 234 Y 234
Y
Sbjct: 1161 Y 1161
>gi|326676804|ref|XP_002665632.2| PREDICTED: pumilio homolog 1 [Danio rerio]
Length = 1152
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/312 (23%), Positives = 139/312 (44%), Gaps = 20/312 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 824 QHGSRFIQLKLERASPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 883
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 884 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVV 940
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI A L+ H GC + +++ + IL I +
Sbjct: 941 QKCIECVQPHALQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLSILEEIHQHTE 1000
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK----FLKYQN 236
L + + GNYV+QHVL I +RG+ + LS K S VV+K L+ +
Sbjct: 1001 QLVQDQYGNYVIQHVLEHGRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAER 1060
Query: 237 AVHYIVEELLN-----SDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQH 290
A+ +++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H
Sbjct: 1061 AM--LIDEVCSMADGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPH 1113
Query: 291 LAALRVMKYGSN 302
+A LR YG +
Sbjct: 1114 IATLRKYTYGKH 1125
>gi|348517676|ref|XP_003446359.1| PREDICTED: pumilio homolog 2 isoform 3 [Oreochromis niloticus]
Length = 1076
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 750 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 809
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 810 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--------DQ 858
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 859 NGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEE 918
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ ++ L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 919 LHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIH 978
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + D+Y NYV+Q + D QR ++
Sbjct: 979 SSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI------DMAEPAQRKIIMH 1032
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1033 KIRPHIATLRKYTYGKH 1049
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 20/243 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S + + G + + Q G V K IE L II
Sbjct: 824 GCRVIQKALESISSDQQSDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 881
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
FQ Q+F+L S +G ++++++ Q L ++ L + + L + G+ VI
Sbjct: 882 AFQGQVFVL-STHPYGCRVIQRILEHCTQEQTL--PILEELHQHSEQLGQDQYGNYVIQH 938
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN--MKGSRRKQILHLISVNAA 180
LE I L L+ H+ +N ++ + SR ++ L + V
Sbjct: 939 VLEHGRPEDKSKIVAEVRGKVLVLSQHKFA----SNVVEKCVIHSSRAERALLIDEVCCQ 994
Query: 181 ---------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 995 KDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKL 1054
Query: 232 LKY 234
KY
Sbjct: 1055 EKY 1057
>gi|348517674|ref|XP_003446358.1| PREDICTED: pumilio homolog 2 isoform 2 [Oreochromis niloticus]
Length = 1188
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 862 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 921
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 922 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--------DQ 970
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 971 NGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEE 1030
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ ++ L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 1031 LHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFASNVVEKCVIH 1090
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + D+Y NYV+Q + D QR ++
Sbjct: 1091 SSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI------DMAEPAQRKIIMH 1144
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1145 KIRPHIATLRKYTYGKH 1161
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 20/243 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S + + G + + Q G V K IE L II
Sbjct: 936 GCRVIQKALESISSDQQSDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 993
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
FQ Q+F+L S +G ++++++ Q L ++ L + + L + G+ VI
Sbjct: 994 AFQGQVFVL-STHPYGCRVIQRILEHCTQEQTL--PILEELHQHSEQLGQDQYGNYVIQH 1050
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN--MKGSRRKQILHLISVNAA 180
LE I L L+ H+ +N ++ + SR ++ L + V
Sbjct: 1051 VLEHGRPEDKSKIVAEVRGKVLVLSQHKFA----SNVVEKCVIHSSRAERALLIDEVCCQ 1106
Query: 181 ---------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 1107 KDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKL 1166
Query: 232 LKY 234
KY
Sbjct: 1167 EKY 1169
>gi|432096853|gb|ELK27431.1| Pumilio like protein 2 [Myotis davidii]
Length = 959
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 633 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 692
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 693 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 741
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 742 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 801
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 802 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 861
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYVIQ + D QR ++
Sbjct: 862 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMI------DMAEPAQRKIIMH 915
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 916 KIRPHITTLRKYTYGKH 932
Score = 38.5 bits (88), Expect = 3.5, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 707 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 764
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 765 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 819
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 820 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 879
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYV+Q ++++ +P I +R H L G ++ K K
Sbjct: 880 GPHSALYTMMKDQYANYVIQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 939
Query: 234 Y 234
Y
Sbjct: 940 Y 940
>gi|291387144|ref|XP_002710096.1| PREDICTED: pumilio homolog 2-like isoform 3 [Oryctolagus cuniculus]
Length = 1009
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 683 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 742
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 743 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 791
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 792 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 851
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 852 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 911
Query: 235 QNAVH---YIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ I E SD + + D+Y NYV+Q + D QR ++
Sbjct: 912 ASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 965
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 966 KIRPHITTLRKYTYGKH 982
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 757 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 814
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 815 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 869
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
LE I L L+ H+ + + + + R ++ + +
Sbjct: 870 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSD 929
Query: 181 -------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 930 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 989
Query: 234 Y 234
Y
Sbjct: 990 Y 990
>gi|291387142|ref|XP_002710095.1| PREDICTED: pumilio homolog 2-like isoform 2 [Oryctolagus cuniculus]
Length = 1065
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH---YIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ I E SD + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
LE I L L+ H+ + + + + R ++ + +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSD 985
Query: 181 -------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|291387140|ref|XP_002710094.1| PREDICTED: pumilio homolog 2-like isoform 1 [Oryctolagus cuniculus]
Length = 986
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 660 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 719
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 720 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 768
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 769 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 828
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 829 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 888
Query: 235 QNAVH---YIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ I E SD + + D+Y NYV+Q + D QR ++
Sbjct: 889 ASRAERALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 942
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 943 KIRPHITTLRKYTYGKH 959
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 734 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 791
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 792 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 846
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
LE I L L+ H+ + + + + R ++ + +
Sbjct: 847 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQSD 906
Query: 181 -------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 907 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 966
Query: 234 Y 234
Y
Sbjct: 967 Y 967
>gi|431911864|gb|ELK14008.1| Pumilio like protein 2 [Pteropus alecto]
Length = 1056
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 730 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 789
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 790 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 838
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 839 NGNHVVQKCIECVQPQSLQFIIDAFKAQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 898
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 899 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 958
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 959 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1012
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1013 KIRPHITTLRKYTYGKH 1029
Score = 38.9 bits (89), Expect = 2.8, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 804 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 861
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 862 AFKAQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 916
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 917 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 976
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 977 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1036
Query: 234 Y 234
Y
Sbjct: 1037 Y 1037
>gi|358414521|ref|XP_003582858.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070244|ref|XP_002691562.2| PREDICTED: pumilio homolog 2 isoform 1 [Bos taurus]
Length = 1007
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 681 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 740
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 741 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 789
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 790 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 849
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 850 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 909
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 910 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 963
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H++ LR YG +
Sbjct: 964 KIRPHISTLRKYTYGKH 980
Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 755 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 812
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 813 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 867
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 868 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 927
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 928 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEK 987
Query: 234 Y 234
Y
Sbjct: 988 Y 988
>gi|358414519|ref|XP_869549.5| PREDICTED: pumilio homolog 2 isoform 7 [Bos taurus]
gi|359070241|ref|XP_003586699.1| PREDICTED: pumilio homolog 2 isoform 3 [Bos taurus]
Length = 984
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 658 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 717
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 718 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 766
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 767 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 826
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 827 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 886
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 887 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 940
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H++ LR YG +
Sbjct: 941 KIRPHISTLRKYTYGKH 957
Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 732 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 789
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 790 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 844
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 845 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 904
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 905 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEK 964
Query: 234 Y 234
Y
Sbjct: 965 Y 965
>gi|358414517|ref|XP_003582857.1| PREDICTED: pumilio homolog 2 [Bos taurus]
gi|359070234|ref|XP_003586698.1| PREDICTED: pumilio homolog 2 isoform 2 [Bos taurus]
Length = 1063
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 737 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 796
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 797 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 845
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 846 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 905
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 906 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 965
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 966 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1019
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H++ LR YG +
Sbjct: 1020 KIRPHISTLRKYTYGKH 1036
Score = 38.5 bits (88), Expect = 3.9, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 811 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 868
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 869 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 923
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 924 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 983
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 984 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHISTLRKYTYGKHILAKLEK 1043
Query: 234 Y 234
Y
Sbjct: 1044 Y 1044
>gi|185132391|ref|NP_001117710.1| pumilio-2 [Oncorhynchus mykiss]
gi|90991428|dbj|BAE93116.1| pumilio-2A [Oncorhynchus mykiss]
Length = 1184
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 858 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 917
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 918 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSDIVRELDGHVLKCVK--------DQ 966
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 967 NGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEE 1026
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ ++ L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 1027 LHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCVIH 1086
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + D+Y NYV+Q + D QR ++
Sbjct: 1087 SSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI------DMAEPAQRKIIMH 1140
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1141 KIRPHIATLRKYTYGKH 1157
Score = 40.0 bits (92), Expect = 1.3, Method: Composition-based stats.
Identities = 54/243 (22%), Positives = 97/243 (39%), Gaps = 20/243 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S + + G + + Q G V K IE L II
Sbjct: 932 GCRVIQKALESISSDQQSDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 989
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
FQ Q+F+L S +G ++++++ Q L ++ L + + L + G+ VI
Sbjct: 990 AFQGQVFVL-STHPYGCRVIQRILEHCTQEQTL--PILEELHQHSEQLGQDQYGNYVIQH 1046
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN--MKGSRRKQILHLISVNAA 180
LE I L L+ H+ +N ++ + SR ++ L + V
Sbjct: 1047 VLEHGRPEDKSKIVAEVRGKVLLLSQHKFA----SNVVEKCVIHSSRAERALLIDEVCCQ 1102
Query: 181 ---------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 1103 KDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKL 1162
Query: 232 LKY 234
KY
Sbjct: 1163 EKY 1165
>gi|354479904|ref|XP_003502149.1| PREDICTED: pumilio homolog 2 isoform 2 [Cricetulus griseus]
Length = 986
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 660 QHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 719
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 720 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 768
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 769 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 828
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 829 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 888
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 889 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 942
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 943 KIRPHITTLRKYTYGKH 959
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 734 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 791
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 792 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 846
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 847 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 906
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 907 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 966
Query: 234 Y 234
Y
Sbjct: 967 Y 967
>gi|354479902|ref|XP_003502148.1| PREDICTED: pumilio homolog 2 isoform 1 [Cricetulus griseus]
Length = 1065
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 985
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|344252117|gb|EGW08221.1| Pumilio-like 2 [Cricetulus griseus]
Length = 1064
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFSEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 846
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 847 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 906
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 907 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 966
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 967 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1020
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1021 KIRPHITTLRKYTYGKH 1037
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 869
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 870 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 924
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 925 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 984
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 985 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Query: 234 Y 234
Y
Sbjct: 1045 Y 1045
>gi|330797119|ref|XP_003286610.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
gi|325083435|gb|EGC36888.1| hypothetical protein DICPUDRAFT_31148 [Dictyostelium purpureum]
Length = 332
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 141/309 (45%), Gaps = 22/309 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+K+ + +F V LM+ +G +V KF E Q ++ K+
Sbjct: 21 GSRIIQQKIENASLEEKQLVFDEVVVAVHSLMTDVFGNYVLQKFFEHGTTEQKRILADKL 80
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L ++ +G ++K I+ + +L ++ L + + G+ VI K
Sbjct: 81 SGH---ILSLTLQMYGCRVIQKAIESIELDKQIL--LIGELNGHIVQCVTDQNGNHVIQK 135
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E + FI + H LA H GC + +++ S+ IL + A SL
Sbjct: 136 CIEKIPTNLIQFIIDSFHGHIYQLATHPYGCRVIQRILEHCAESQVAPILDELMRCAVSL 195
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--Y 240
+ + GNYV+QHVL AI + L+G +LS K S V++K +++ +
Sbjct: 196 VQDQYGNYVIQHVLENGSQRDKTAIVYKLQGQIYNLSQHKFASNVIEKCVQHGVSSERIL 255
Query: 241 IVEELL-------NSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKLQQHL 291
I+ E+L +S+ +L++ D Y NYVIQ L VE ++D ++ ++Q +
Sbjct: 256 IINEILGDINAPNSSNVLLKILKDPYANYVIQKILDIVEPSQRD------VIINRIQPFI 309
Query: 292 AALRVMKYG 300
L+ + G
Sbjct: 310 PTLKKVTPG 318
>gi|385303897|gb|EIF47942.1| member of the puf protein family [Dekkera bruxellensis AWRI1499]
Length = 591
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 139/304 (45%), Gaps = 14/304 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G +YLQ KL G ++F V ELM +G ++ K + C QL ++ I
Sbjct: 278 GCRYLQRKLDEGXXDSFAQIFGPVCAHAAELMMDPFGNYLMQKVMGCCTVEQLDAVL--I 335
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L +A VD+ G+ +++KLI+ + + + L L+ G+ VI K
Sbjct: 336 SAGPSLCAVA-VDQHGTRALQKLIERIXTRKQRML-LERYLAPYVVALIGDLNGNHVIQK 393
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C++ + FI + + ++ H+ GC L ++ + +Q+ I ++ +L
Sbjct: 394 CVQRFRDSDLQFIVDQISANIVPVSTHKHGCCVLQKLLNKCNMQQIEQLGXQIVQHSLAL 453
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK------YQN 236
+ NYVVQ++ ++E L + + LS K S VV+K L+ +
Sbjct: 454 MEDQYANYVVQYLASMEIDSLNAQLLATVAPCVRQLSCQKFSSNVVEKCLRIRSYRVFSQ 513
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
V +++E+L D + + D+YGNYV+QTA+ + + +L R +L L +R
Sbjct: 514 FVSRLLDEILLPDVLPVLIRDQYGNYVVQTAMEVSSAEYKL----RFARELAPLLPEIRF 569
Query: 297 MKYG 300
+G
Sbjct: 570 ASFG 573
>gi|449268799|gb|EMC79640.1| Pumilio like protein 2 [Columba livia]
Length = 1062
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 736 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 795
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 796 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 850
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 851 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 910
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 911 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 970
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 971 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1024
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1025 TTLRKYTYGKH 1035
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S +++ + G + + Q G V K IE L II
Sbjct: 810 GCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 867
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 868 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 922
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 923 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 982
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 983 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1042
Query: 234 Y 234
Y
Sbjct: 1043 Y 1043
>gi|86129498|ref|NP_001034381.1| pumilio homolog 2 [Gallus gallus]
gi|82569974|gb|ABB83589.1| pumilio 2 [Gallus gallus]
Length = 1061
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 735 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 794
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 795 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 849
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 850 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 909
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 910 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 969
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 970 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1023
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1024 TTLRKYTYGKH 1034
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S +++ + G + + Q G V K IE L II
Sbjct: 809 GCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 866
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 867 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 921
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 922 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 981
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 982 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1041
Query: 234 Y 234
Y
Sbjct: 1042 Y 1042
>gi|326916555|ref|XP_003204572.1| PREDICTED: pumilio homolog 2-like [Meleagris gallopavo]
Length = 1061
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 735 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 794
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 795 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 849
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 850 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 909
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 910 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 969
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 970 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1023
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1024 TTLRKYTYGKH 1034
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S +++ + G + + Q G V K IE L II
Sbjct: 809 GCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 866
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 867 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 921
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 922 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 981
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 982 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1041
Query: 234 Y 234
Y
Sbjct: 1042 Y 1042
>gi|224048793|ref|XP_002187244.1| PREDICTED: pumilio homolog 2 [Taeniopygia guttata]
Length = 1061
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 136/311 (43%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 735 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 794
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 795 RI--RGHVLPLA-LQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 849
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 850 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 909
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 910 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 969
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 970 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 1023
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 1024 TTLRKYTYGKH 1034
Score = 37.7 bits (86), Expect = 6.2, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S +++ + G + + Q G V K IE L II
Sbjct: 809 GCRVIQKALESISPDQQNEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 866
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 867 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 921
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 922 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 981
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 982 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1041
Query: 234 Y 234
Y
Sbjct: 1042 Y 1042
>gi|440896924|gb|ELR48715.1| Pumilio-like protein 1, partial [Bos grunniens mutus]
Length = 1192
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 864 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 921
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 922 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 979
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 980 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1039
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1040 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1099
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1100 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1154
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1155 ATLRKYTYGKH 1165
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 938 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 996
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 997 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1050
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1051 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1110
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1111 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1170
Query: 232 LKY 234
KY
Sbjct: 1171 EKY 1173
>gi|426221805|ref|XP_004005097.1| PREDICTED: pumilio homolog 1 isoform 2 [Ovis aries]
Length = 1038
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 710 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 767
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 768 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 825
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 826 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 885
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 886 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 945
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 946 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1000
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1001 ATLRKYTYGKH 1011
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 784 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 842
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 843 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 896
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 897 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 956
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 957 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1016
Query: 232 LKY 234
KY
Sbjct: 1017 EKY 1019
>gi|73950042|ref|XP_852168.1| PREDICTED: pumilio homolog 1 isoform 2 [Canis lupus familiaris]
Length = 1224
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|50552866|ref|XP_503843.1| YALI0E12001p [Yarrowia lipolytica]
gi|49649712|emb|CAG79436.1| YALI0E12001p [Yarrowia lipolytica CLIB122]
Length = 752
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 144/307 (46%), Gaps = 17/307 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L S +F + + +LM+ +G +V KF + +Q A++
Sbjct: 439 QHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSNAQKAVLTK 498
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + L S+ +G V+K I+ V + H+++ L + + + G+ VI
Sbjct: 499 QM---EGHVLSLSLQMYGCRVVQKAIEYVDTA--KQAHLINELDKHVLRCVKDQNGNHVI 553
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E FI A E LA H GC + +++ + ++ IL + A
Sbjct: 554 QKAIEKIPPQHIQFIINAFNEQVYQLATHPYGCRVIQRMLEHCEEAQ-AAILAELHNYAY 612
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + + GNYV+QHVL P +A+ ++ H + S K S VV+K + Y N
Sbjct: 613 HLIQDQYGNYVIQHVLEQGAPDDKEAMMLVIKQHVLIFSRHKFASNVVEKCVIYGNRRQR 672
Query: 241 --IVEELLN--SDQILQVA---SDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++EE+ D L + D++ NYVIQ L + +D LV+ ++ HLA+
Sbjct: 673 RALIEEIATEREDGTLPITVMMKDQFANYVIQKLLDVSEGED----FDLLVSIIKPHLAS 728
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 729 LKKYSYG 735
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ----HVLN 197
H + + + G + +++ G + I I ++ L GNYVVQ H N
Sbjct: 431 HIVEFSGDQHGSRFIQQQLESASGEEKSAIFEEIRPSSLQLMTDVFGNYVVQKFFVHGSN 490
Query: 198 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVA 255
+ L + GH + LSL G VVQK ++Y + +++ EL +L+
Sbjct: 491 AQKAVLTK----QMEGHVLSLSLQMYGCRVVQKAIEYVDTAKQAHLINEL--DKHVLRCV 544
Query: 256 SDKYGNYVIQTAL 268
D+ GN+VIQ A+
Sbjct: 545 KDQNGNHVIQKAI 557
>gi|410966648|ref|XP_003989842.1| PREDICTED: pumilio homolog 1 isoform 2 [Felis catus]
Length = 1224
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|281353340|gb|EFB28924.1| hypothetical protein PANDA_013254 [Ailuropoda melanoleuca]
Length = 1193
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 865 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 922
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 923 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 980
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 981 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1040
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1041 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1100
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1101 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1155
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1156 ATLRKYTYGKH 1166
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 939 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 997
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 998 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1051
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1052 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1111
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1112 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1171
Query: 232 LKY 234
KY
Sbjct: 1172 EKY 1174
>gi|426334843|ref|XP_004028946.1| PREDICTED: pumilio homolog 2 isoform 2 [Gorilla gorilla gorilla]
Length = 986
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 660 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 719
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 720 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 768
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 769 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 828
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 829 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 888
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 889 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 942
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 943 KIRPHITTLRKYTYGKH 959
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 734 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 791
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 792 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 846
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 847 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 906
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 907 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 966
Query: 234 Y 234
Y
Sbjct: 967 Y 967
>gi|426223188|ref|XP_004005759.1| PREDICTED: pumilio homolog 2 isoform 2 [Ovis aries]
Length = 1007
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 681 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 740
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 741 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 789
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 790 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 849
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 850 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 909
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 910 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 963
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 964 KIRPHITTLRKYTYGKH 980
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 755 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 812
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 813 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 867
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 868 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 927
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 928 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 987
Query: 234 Y 234
Y
Sbjct: 988 Y 988
>gi|426223186|ref|XP_004005758.1| PREDICTED: pumilio homolog 2 isoform 1 [Ovis aries]
Length = 1063
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 737 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 796
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 797 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 845
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 846 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 905
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 906 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 965
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 966 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1019
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1020 KIRPHITTLRKYTYGKH 1036
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 811 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 868
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 869 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 923
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 924 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 983
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 984 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1043
Query: 234 Y 234
Y
Sbjct: 1044 Y 1044
>gi|73979803|ref|XP_858023.1| PREDICTED: pumilio homolog 2 isoform 5 [Canis lupus familiaris]
Length = 984
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 658 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 717
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 718 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 766
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 767 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 826
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 827 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 886
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 887 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 940
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 941 KIRPHITTLRKYTYGKH 957
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 732 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 789
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 790 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 844
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 845 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 904
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 905 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 964
Query: 234 Y 234
Y
Sbjct: 965 Y 965
>gi|73979795|ref|XP_849088.1| PREDICTED: pumilio homolog 2 isoform 1 [Canis lupus familiaris]
Length = 1063
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 737 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 796
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 797 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 845
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 846 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 905
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 906 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 965
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 966 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1019
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1020 KIRPHITTLRKYTYGKH 1036
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 811 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 868
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 869 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 923
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 924 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 983
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 984 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1043
Query: 234 Y 234
Y
Sbjct: 1044 Y 1044
>gi|13491168|ref|NP_056132.1| pumilio homolog 2 [Homo sapiens]
gi|11139704|gb|AAG31806.1|AF315591_1 Pumilio 2 [Homo sapiens]
gi|20521854|dbj|BAA19665.3| KIAA0235 protein [Homo sapiens]
gi|62822478|gb|AAY15026.1| unknown [Homo sapiens]
gi|85566710|gb|AAI12047.1| Pumilio homolog 2 (Drosophila) [Homo sapiens]
gi|85567007|gb|AAI12049.1| Pumilio homolog 2 [Homo sapiens]
gi|119621226|gb|EAX00821.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|119621228|gb|EAX00823.1| pumilio homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
gi|168267226|dbj|BAG09669.1| pumilio homolog 2 [synthetic construct]
gi|193787566|dbj|BAG52772.1| unnamed protein product [Homo sapiens]
Length = 1064
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 846
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 847 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 906
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 907 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 966
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 967 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1020
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1021 KIRPHITTLRKYTYGKH 1037
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 869
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 870 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 924
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 925 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 984
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 985 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Query: 234 Y 234
Y
Sbjct: 1045 Y 1045
>gi|417405515|gb|JAA49467.1| Putative rna-binding protein of the puf family [Desmodus rotundus]
Length = 985
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 659 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 718
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 719 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 767
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + +L
Sbjct: 768 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPVLEE 827
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 828 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 887
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYVIQ + D QR ++
Sbjct: 888 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVIQKMI------DMAEPAQRKIIMH 941
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 942 KIRPHITTLRKYTYGKH 958
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 733 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 790
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P V+ L + + L+ + G+ VI
Sbjct: 791 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLP----VLEELHQHTEQLVQDQYGNYVI 845
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 846 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 905
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYV+Q ++++ +P I +R H L G ++ K K
Sbjct: 906 GPHSALYTMMKDQYANYVIQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 965
Query: 234 Y 234
Y
Sbjct: 966 Y 966
>gi|410955768|ref|XP_003984522.1| PREDICTED: pumilio homolog 2 isoform 3 [Felis catus]
Length = 1007
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 681 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 740
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 741 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 789
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 790 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 849
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 850 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 909
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 910 ASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 963
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 964 KIRPHITTLRKYTYGKH 980
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 755 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 812
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 813 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 867
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 868 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 927
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 928 GAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 987
Query: 234 Y 234
Y
Sbjct: 988 Y 988
>gi|410955766|ref|XP_003984521.1| PREDICTED: pumilio homolog 2 isoform 2 [Felis catus]
Length = 1063
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 737 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 796
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 797 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 845
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 846 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 905
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 906 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 965
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 966 ASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1019
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1020 KIRPHITTLRKYTYGKH 1036
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 811 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 868
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 869 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 923
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 924 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 983
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 984 GAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1043
Query: 234 Y 234
Y
Sbjct: 1044 Y 1044
>gi|410955764|ref|XP_003984520.1| PREDICTED: pumilio homolog 2 isoform 1 [Felis catus]
Length = 984
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 658 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 717
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 718 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 766
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 767 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 826
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 827 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 886
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 887 ASRAERALLIDEVCCQNDGAHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 940
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 941 KIRPHITTLRKYTYGKH 957
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 732 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 789
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 790 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 844
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 845 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 904
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 905 GAHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 964
Query: 234 Y 234
Y
Sbjct: 965 Y 965
>gi|403288169|ref|XP_003935285.1| PREDICTED: pumilio homolog 2 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1010
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 684 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 743
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 744 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 792
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 793 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 852
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 853 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 912
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 913 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 966
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 967 KIRPHITTLRKYTYGKH 983
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 758 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 815
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 816 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 870
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 871 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 930
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 931 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 990
Query: 234 Y 234
Y
Sbjct: 991 Y 991
>gi|403288167|ref|XP_003935284.1| PREDICTED: pumilio homolog 2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 987
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 661 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 720
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 721 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 769
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 770 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 829
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 830 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 889
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 890 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 943
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 944 KIRPHITTLRKYTYGKH 960
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 735 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 792
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 793 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 847
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 848 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 907
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 908 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 967
Query: 234 Y 234
Y
Sbjct: 968 Y 968
>gi|403288165|ref|XP_003935283.1| PREDICTED: pumilio homolog 2 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1066
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 740 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 799
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 800 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 848
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 849 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 908
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 909 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 968
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 969 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1022
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1023 KIRPHITTLRKYTYGKH 1039
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 814 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 871
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 872 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 926
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 927 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 986
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 987 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1046
Query: 234 Y 234
Y
Sbjct: 1047 Y 1047
>gi|402890199|ref|XP_003908378.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 2 [Papio anubis]
Length = 984
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 658 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 717
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 718 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 766
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 767 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 826
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 827 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 886
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 887 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 940
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 941 KIRPHITTLRKYTYGKH 957
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 732 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 789
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 790 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 844
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 845 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 904
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 905 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 964
Query: 234 Y 234
Y
Sbjct: 965 Y 965
>gi|383417009|gb|AFH31718.1| pumilio homolog 2 [Macaca mulatta]
Length = 1059
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 733 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 792
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 793 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 841
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 842 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 901
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 902 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 961
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 962 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1015
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1016 KIRPHITTLRKYTYGKH 1032
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 807 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 864
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 865 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 919
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 920 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 979
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 980 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1039
Query: 234 Y 234
Y
Sbjct: 1040 Y 1040
>gi|383417007|gb|AFH31717.1| pumilio homolog 2 [Macaca mulatta]
Length = 1060
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 734 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 793
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 794 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 842
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 843 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 902
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 903 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 962
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 963 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1016
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1017 KIRPHITTLRKYTYGKH 1033
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 808 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 865
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 866 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 920
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 921 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 980
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 981 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1040
Query: 234 Y 234
Y
Sbjct: 1041 Y 1041
>gi|380811084|gb|AFE77417.1| pumilio homolog 2 [Macaca mulatta]
gi|383417013|gb|AFH31720.1| pumilio homolog 2 [Macaca mulatta]
gi|384946088|gb|AFI36649.1| pumilio homolog 2 [Macaca mulatta]
Length = 1065
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 985
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|344280367|ref|XP_003411955.1| PREDICTED: pumilio homolog 2 [Loxodonta africana]
Length = 1067
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 741 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 800
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 801 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 849
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 850 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 909
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 910 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 969
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 970 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1023
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1024 KIRPHITTLRKYTYGKH 1040
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 815 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 872
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 873 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 927
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 928 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 987
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 988 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1047
Query: 234 Y 234
Y
Sbjct: 1048 Y 1048
>gi|332253819|ref|XP_003276029.1| PREDICTED: pumilio homolog 2 isoform 2 [Nomascus leucogenys]
Length = 1009
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 683 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 742
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 743 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 791
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 792 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 851
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 852 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 911
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 912 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 965
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 966 KIRPHITTLRKYTYGKH 982
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 757 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 814
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 815 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 869
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 870 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 929
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 930 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 989
Query: 234 Y 234
Y
Sbjct: 990 Y 990
>gi|332253817|ref|XP_003276028.1| PREDICTED: pumilio homolog 2 isoform 1 [Nomascus leucogenys]
Length = 1065
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 985
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|350582684|ref|XP_003481332.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 1004
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 678 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 737
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 738 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 786
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 787 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 846
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 847 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 906
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 907 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 960
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 961 KIRPHITTLRKYTYGKH 977
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 752 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 809
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 810 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 864
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 865 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 924
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 925 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 984
Query: 234 Y 234
Y
Sbjct: 985 Y 985
>gi|350582680|ref|XP_003125422.3| PREDICTED: pumilio homolog 2 isoform 1 [Sus scrofa]
Length = 1060
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 734 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 793
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 794 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 842
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 843 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 902
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 903 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 962
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 963 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1016
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1017 KIRPHITTLRKYTYGKH 1033
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 808 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 865
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 866 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 920
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 921 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 980
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 981 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1040
Query: 234 Y 234
Y
Sbjct: 1041 Y 1041
>gi|350582682|ref|XP_003481331.1| PREDICTED: pumilio homolog 2 [Sus scrofa]
Length = 981
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 655 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 714
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 715 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 763
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 764 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 823
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 824 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 883
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 884 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 937
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 938 KIRPHITTLRKYTYGKH 954
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 729 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 786
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 787 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 841
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 842 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 901
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 902 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 961
Query: 234 Y 234
Y
Sbjct: 962 Y 962
>gi|301758394|ref|XP_002915042.1| PREDICTED: pumilio homolog 2-like [Ailuropoda melanoleuca]
Length = 1064
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 846
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 847 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 906
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 907 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 966
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 967 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1020
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1021 KIRPHITTLRKYTYGKH 1037
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 869
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 870 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 924
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 925 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 984
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 985 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Query: 234 Y 234
Y
Sbjct: 1045 Y 1045
>gi|297668111|ref|XP_002812298.1| PREDICTED: pumilio homolog 2 isoform 3 [Pongo abelii]
Length = 1009
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 683 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 742
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 743 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 791
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 792 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 851
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 852 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 911
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 912 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 965
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 966 KIRPHITTLRKYTYGKH 982
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 757 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 814
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 815 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 869
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 870 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 929
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 930 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 989
Query: 234 Y 234
Y
Sbjct: 990 Y 990
>gi|297668109|ref|XP_002812297.1| PREDICTED: pumilio homolog 2 isoform 2 [Pongo abelii]
Length = 1065
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 985
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|297265504|ref|XP_001095426.2| PREDICTED: pumilio homolog 2-like isoform 1 [Macaca mulatta]
Length = 986
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 660 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 719
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 720 RI--RGHVLPLA-LQMYGCRVIQKALESISSDMQSEMVKELDGHVLKCVK--------DQ 768
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 769 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 828
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 829 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 888
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 889 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 942
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 943 KIRPHITTLRKYTYGKH 959
Score = 40.8 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 97/241 (40%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S + ++ + G + + Q G V K IE L II
Sbjct: 734 GCRVIQKALESISSDMQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 791
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 792 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 846
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 847 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 906
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 907 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 966
Query: 234 Y 234
Y
Sbjct: 967 Y 967
>gi|296224411|ref|XP_002758049.1| PREDICTED: pumilio homolog 2 isoform 2 [Callithrix jacchus]
Length = 1064
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 846
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 847 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 906
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 907 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 966
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 967 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1020
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1021 KIRPHITTLRKYTYGKH 1037
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 869
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 870 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 924
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 925 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 984
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 985 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Query: 234 Y 234
Y
Sbjct: 1045 Y 1045
>gi|194385402|dbj|BAG65078.1| unnamed protein product [Homo sapiens]
Length = 1008
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 682 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 741
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 742 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 790
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 791 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 850
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 851 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 910
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 911 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 964
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 965 KIRPHITTLRKYTYGKH 981
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 756 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 813
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 814 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 868
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 869 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 928
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 929 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 988
Query: 234 Y 234
Y
Sbjct: 989 Y 989
>gi|149727740|ref|XP_001503365.1| PREDICTED: pumilio homolog 2 [Equus caballus]
Length = 1063
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 737 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 796
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 797 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 845
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 846 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 905
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 906 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 965
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 966 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1019
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1020 KIRPHITTLRKYTYGKH 1036
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 811 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 868
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 869 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 923
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 924 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 983
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 984 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1043
Query: 234 Y 234
Y
Sbjct: 1044 Y 1044
>gi|119621227|gb|EAX00822.1| pumilio homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
gi|219517887|gb|AAI43551.1| PUM2 protein [Homo sapiens]
Length = 985
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 659 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 718
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 719 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 767
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 768 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 827
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 828 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 887
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 888 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 941
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 942 KIRPHITTLRKYTYGKH 958
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 733 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 790
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 791 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 845
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 846 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 905
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 906 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 965
Query: 234 Y 234
Y
Sbjct: 966 Y 966
>gi|332812701|ref|XP_003308953.1| PREDICTED: pumilio homolog 2 [Pan troglodytes]
gi|397513517|ref|XP_003827059.1| PREDICTED: pumilio homolog 2 isoform 2 [Pan paniscus]
gi|426334845|ref|XP_004028947.1| PREDICTED: pumilio homolog 2 isoform 3 [Gorilla gorilla gorilla]
Length = 1009
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 683 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 742
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 743 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 791
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 792 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 851
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 852 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 911
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 912 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 965
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 966 KIRPHITTLRKYTYGKH 982
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 757 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 814
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 815 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 869
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 870 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 929
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 930 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 989
Query: 234 Y 234
Y
Sbjct: 990 Y 990
>gi|114576339|ref|XP_001140678.1| PREDICTED: pumilio homolog 2 isoform 10 [Pan troglodytes]
gi|397513515|ref|XP_003827058.1| PREDICTED: pumilio homolog 2 isoform 1 [Pan paniscus]
gi|426334841|ref|XP_004028945.1| PREDICTED: pumilio homolog 2 isoform 1 [Gorilla gorilla gorilla]
gi|410258976|gb|JAA17454.1| pumilio homolog 2 [Pan troglodytes]
gi|410298912|gb|JAA28056.1| pumilio homolog 2 [Pan troglodytes]
gi|410335699|gb|JAA36796.1| pumilio homolog 2 [Pan troglodytes]
Length = 1065
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1021
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1022 KIRPHITTLRKYTYGKH 1038
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 813 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 870
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 871 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 925
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 926 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 985
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 986 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1045
Query: 234 Y 234
Y
Sbjct: 1046 Y 1046
>gi|145525300|ref|XP_001448472.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416016|emb|CAK81075.1| unnamed protein product [Paramecium tetraurelia]
Length = 483
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 26/307 (8%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ +Q+ +G + ++FW V E +G ++ K +E Q ++I
Sbjct: 171 SRKVQKIFETGQTNQRQQIFWKVQANCQEFSKDIFGNYLIQKILEKGTLQQQ----IQIF 226
Query: 64 FQDQLFLLA-SVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
Q Q +++ S + FG ++KLI +++++ L+ + +K+ K L+ + G VILK
Sbjct: 227 KQLQPYVVELSKNTFGCRVIQKLIDIISKNDHLIVPFIQEIKQNIKSLLTDQNGKYVILK 286
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV---NA 179
CLE FI + E ++ + GC + IDN KQ+ L+ + N
Sbjct: 287 CLENLSIDVVRFILKPTEELGFHMCDSQYGCKIIQKLIDNYP----KQVDTLVQICITNQ 342
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----- 234
L + + GN+++Q+ + L P +D I + H +L K S V+ LKY
Sbjct: 343 NLLYKSQHGNHILQYAIKL--PKYLDIIANYILNHLENLCFNKYASNTVEDILKYLTPKL 400
Query: 235 -QNAVHYIVEELLNSDQ--ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
N V +++ N+ L +A + +GNYV++ L + Q+ Q+LV ++Q+L
Sbjct: 401 KNNFVQILMKPSENNGMFIFLNLAINPFGNYVVKKVL-QIFDQEH---KQQLVDLMKQNL 456
Query: 292 AALRVMK 298
L ++K
Sbjct: 457 RLLYLIK 463
>gi|358391961|gb|EHK41365.1| hypothetical protein TRIATDRAFT_147678 [Trichoderma atroviride IMI
206040]
Length = 415
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 28/316 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +S +++F + +LM +G +V KF E SQL IL
Sbjct: 38 GSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYG--SQLQKKILAE 95
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ L SV + V+K ++ +V Q L + + R+ K + G+ V+
Sbjct: 96 KMKGKVVDL-SVQVYACRVVQKALEHILVEQQAELTRELEPEILRVIK----DQNGNHVV 150
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E DFI A LA H GC + +++ + +I+ + +A
Sbjct: 151 QKIIELVPRQYIDFIMNAVRGQVTPLASHAYGCRVIQRLLEHGTEEDKAEIMGELHASAQ 210
Query: 181 SLSRHRSGNYVVQHVL---NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L + GNYV QHV+ LED + I + G + LS K S VV+K +++
Sbjct: 211 ILITDQYGNYVAQHVIQNGELED---RERIIQLVMGQLLTLSKHKFASNVVEKCIEFGTP 267
Query: 238 VH--YIVEELLNS-----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
I E+L + + + Q+ D++GNYVIQ L + ++R + LV +++
Sbjct: 268 AQRTTIREQLTTAGPDGNNPLQQMMRDQFGNYVIQKMLGQLQGEERDA----LVEEIKPQ 323
Query: 291 LAALRVMKYGSNKEIQ 306
L+ K G+++++Q
Sbjct: 324 FYNLK--KSGASRQLQ 337
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 10/138 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++QI I NA L + GNYVVQ
Sbjct: 28 HAVEFSGDQHGSRFIQQKLETANSDEKEQIFREIEPNALQLMKDVFGNYVVQKFFEYGSQ 87
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN-----SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE+ +IL+V
Sbjct: 88 LQKKILAEKMKGKVVDLSVQVYACRVVQKALE-----HILVEQQAELTRELEPEILRVIK 142
Query: 257 DKYGNYVIQTALVETMRQ 274
D+ GN+V+Q + RQ
Sbjct: 143 DQNGNHVVQKIIELVPRQ 160
>gi|123913364|sp|Q2VB19.1|PUM1_CHICK RecName: Full=Pumilio homolog 1
gi|82569972|gb|ABB83588.1| pumilio 1 [Gallus gallus]
Length = 1189
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 861 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|61098182|ref|NP_001012858.1| pumilio homolog 1 [Gallus gallus]
gi|60098393|emb|CAH65027.1| hypothetical protein RCJMB04_1f11 [Gallus gallus]
Length = 1093
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 765 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 822
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 823 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 880
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 881 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 940
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 941 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1000
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1001 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1055
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1056 ATLRKYTYGKH 1066
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 839 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 897
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 898 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 951
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 952 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1011
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1012 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1071
Query: 232 LKY 234
KY
Sbjct: 1072 EKY 1074
>gi|387017906|gb|AFJ51071.1| Pumilio homolog 1-like [Crotalus adamanteus]
Length = 1185
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 857 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 914
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 915 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 972
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 973 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 1032
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1033 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1092
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1093 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1147
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1148 ATLRKYTYGKH 1158
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 931 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 989
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 990 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 1043
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1044 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1103
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1104 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1163
Query: 232 LKY 234
KY
Sbjct: 1164 EKY 1166
>gi|395526794|ref|XP_003765541.1| PREDICTED: pumilio homolog 1 isoform 2 [Sarcophilus harrisii]
Length = 1094
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 766 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 823
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 824 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 881
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 882 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 941
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 942 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1001
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1002 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1056
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1057 ATLRKYTYGKH 1067
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 840 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 898
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 899 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 952
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 953 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1012
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1013 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1072
Query: 232 LKY 234
KY
Sbjct: 1073 EKY 1075
>gi|334329171|ref|XP_003341193.1| PREDICTED: pumilio homolog 1 isoform 2 [Monodelphis domestica]
Length = 1094
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 766 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 823
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 824 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 881
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 882 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 941
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 942 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1001
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1002 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1056
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1057 ATLRKYTYGKH 1067
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 840 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 898
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 899 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 952
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 953 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1012
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1013 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1072
Query: 232 LKY 234
KY
Sbjct: 1073 EKY 1075
>gi|327286699|ref|XP_003228067.1| PREDICTED: pumilio homolog 1-like isoform 2 [Anolis carolinensis]
Length = 1091
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 763 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 820
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 821 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 878
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 879 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 938
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 939 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 998
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 999 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1053
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1054 ATLRKYTYGKH 1064
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 837 GCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 895
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 896 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQ----DQYGNY 949
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 950 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAMLIDEVCTM 1009
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1010 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1069
Query: 232 LKY 234
KY
Sbjct: 1070 EKY 1072
>gi|403293274|ref|XP_003937645.1| PREDICTED: pumilio homolog 1 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 1224
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|355745080|gb|EHH49705.1| hypothetical protein EGM_00414 [Macaca fascicularis]
Length = 1224
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|109000868|ref|XP_001096289.1| PREDICTED: pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|114555200|ref|XP_001157067.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan troglodytes]
gi|397515865|ref|XP_003828162.1| PREDICTED: pumilio homolog 1 isoform 3 [Pan paniscus]
gi|355557757|gb|EHH14537.1| hypothetical protein EGK_00481 [Macaca mulatta]
Length = 1224
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|119628035|gb|EAX07630.1| pumilio homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1193
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 865 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 922
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 923 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 980
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 981 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1040
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1041 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1100
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1101 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1155
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1156 ATLRKYTYGKH 1166
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 939 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 997
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 998 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1051
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1052 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1111
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1112 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1171
Query: 232 LKY 234
KY
Sbjct: 1172 EKY 1174
>gi|109000894|ref|XP_001096958.1| PREDICTED: pumilio homolog 1 isoform 6 [Macaca mulatta]
Length = 1162
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 834 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 891
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 892 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 949
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 950 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1009
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1010 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1069
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1070 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1124
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1125 ATLRKYTYGKH 1135
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 908 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 966
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 967 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1020
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1021 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1080
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1081 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1140
Query: 232 LKY 234
KY
Sbjct: 1141 EKY 1143
>gi|66932909|ref|NP_001018494.1| pumilio homolog 1 isoform 1 [Homo sapiens]
gi|380784595|gb|AFE64173.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|383410799|gb|AFH28613.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|384943764|gb|AFI35487.1| pumilio homolog 1 isoform 1 [Macaca mulatta]
gi|410225218|gb|JAA09828.1| pumilio homolog 1 [Pan troglodytes]
gi|410266290|gb|JAA21111.1| pumilio homolog 1 [Pan troglodytes]
gi|410304038|gb|JAA30619.1| pumilio homolog 1 [Pan troglodytes]
gi|410350697|gb|JAA41952.1| pumilio homolog 1 [Pan troglodytes]
Length = 1188
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 975
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 976 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1035
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1036 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1095
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1096 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1150
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1151 ATLRKYTYGKH 1161
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 934 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 992
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 993 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1046
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1047 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1106
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1107 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1166
Query: 232 LKY 234
KY
Sbjct: 1167 EKY 1169
>gi|62896769|dbj|BAD96325.1| pumilio homolog 1 variant [Homo sapiens]
Length = 1188
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 975
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 976 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1035
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1036 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1095
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1096 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1150
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1151 ATLRKYTYGKH 1161
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 934 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 992
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 993 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1046
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1047 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1106
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1107 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1166
Query: 232 LKY 234
KY
Sbjct: 1167 EKY 1169
>gi|119628036|gb|EAX07631.1| pumilio homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1189
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 861 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 918
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 919 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 976
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 977 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1036
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1037 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1096
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1097 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1151
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1152 ATLRKYTYGKH 1162
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 935 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 993
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 994 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1047
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1048 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1107
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1108 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1167
Query: 232 LKY 234
KY
Sbjct: 1168 EKY 1170
>gi|119628037|gb|EAX07632.1| pumilio homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 1224
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 1011
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 1012 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1071
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1072 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1131
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1132 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1186
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1187 ATLRKYTYGKH 1197
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 970 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1028
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 1029 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1082
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1083 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1142
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1143 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1202
Query: 232 LKY 234
KY
Sbjct: 1203 EKY 1205
>gi|432883258|ref|XP_004074234.1| PREDICTED: pumilio homolog 1 [Oryzias latipes]
Length = 1166
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 16/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 838 QHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 897
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 898 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV 954
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI +A L+ H GC + +++ + IL + +
Sbjct: 955 QKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE 1014
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL I +RG+ + LS K S VV+K + + +
Sbjct: 1015 QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTER 1074
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H++
Sbjct: 1075 AMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHIS 1129
Query: 293 ALRVMKYGSN 302
LR YG +
Sbjct: 1130 TLRKYTYGKH 1139
>gi|261872057|gb|ACY02862.1| pumilio 1, partial [Oryzias latipes]
Length = 1162
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 70/310 (22%), Positives = 138/310 (44%), Gaps = 16/310 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 834 QHGSRFIQLKLERASVAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 893
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 894 RI--RGHVLSLA-LQMYGCRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVV 950
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI +A L+ H GC + +++ + IL + +
Sbjct: 951 QKCIECVQPHALHFIIEAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE 1010
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL I +RG+ + LS K S VV+K + + +
Sbjct: 1011 QLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRTER 1070
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H++
Sbjct: 1071 AMLIDEVCGLTEGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHIS 1125
Query: 293 ALRVMKYGSN 302
LR YG +
Sbjct: 1126 TLRKYTYGKH 1135
>gi|261331948|emb|CBH14941.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 585
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L D I + + ELM+ QY F+ K +
Sbjct: 232 QHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFD---------- 281
Query: 59 ILKITFQDQLFLLASV----------DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFK 108
I +D + +A V G+ SV+K+I+ ++ L+ + AL +
Sbjct: 282 ---IMPKDVRYNVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVI-IREALSKDVV 337
Query: 109 FLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 168
L+ G+ I K L+ +F+Y A C+ +A ++QGC L ++ ++R
Sbjct: 338 RLVKDANGNHAIQKVLQRFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQR 397
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
++ I ++ GNYV+Q+V++ D ID I A H V L + K S V+
Sbjct: 398 STLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVM 457
Query: 229 QKFLKYQNAV--HYIVEELLNSDQILQVASDKYGNYVIQTALV 269
+K L + + V+ + + ++ D +GNYV+QTAL
Sbjct: 458 EKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALT 500
>gi|298709331|emb|CBJ31267.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 729
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 40/285 (14%)
Query: 33 LMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQS 92
+M +G ++F K ++ Q L + +T + A+V+ G+ V+K+++
Sbjct: 441 MMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDR---MPEAAVNLHGTRCVQKVVE----- 492
Query: 93 PPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNH------------KNDFIYQAAL 140
L + + + L G SV+ L+P+ NH +NDF+ +A
Sbjct: 493 ---LCRTDAQAAVIARSL-----GPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAIT 544
Query: 141 EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL-- 198
+ +A H GC L +D + R +++ ++ N L + GNYVVQ+VL
Sbjct: 545 ASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCS 604
Query: 199 -EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVA 255
E+ ++ +C A GH LS K S V++ L+ VEEL +I ++
Sbjct: 605 REETYM---LCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELI 661
Query: 256 SDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
D+Y NYV+Q AL ++ L +LV ++ HL +++ G
Sbjct: 662 LDQYANYVVQRALTVANNEEGL----KLVNAIRPHLHSMQSTSSG 702
>gi|303280035|ref|XP_003059310.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459146|gb|EEH56442.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 429
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 21/310 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +F V LM+ +G +V KF+ + Q+ I ++
Sbjct: 34 GSRFIQQKLETAAPEDAQLVFDEVLPAAHALMTDVFGNYVVQKFLANGTPEQIDAIAGEL 93
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L S+ +G ++K ++V+ + +++ L+ + + G+ V+ K
Sbjct: 94 KGH---VLSLSLQMYGCRVIQKALEVIDEDAQCA--LVAELEGHVSRCVRDQNGNHVVQK 148
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCI-----NLNNFIDNMKGSRRKQ-ILHLIS 176
C+E K FI +A + L L+ H GC +++ +++ ++ + I+ I
Sbjct: 149 CIECVAPAKIQFIVEAFYGNVLSLSTHPYGCRVIQARSIHWVLEHCTPEQKSEGIMDEIL 208
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
A SL++ + GNYVVQHVL I L G V L+ K S V++K L Y
Sbjct: 209 REATSLAQDQYGNYVVQHVLQHGGEGERKTILQTLAGQIVLLAQHKFASNVIEKCLTYCG 268
Query: 237 AV--HYIVEELL---NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
A +++E+L + ++ LQ + D++ NYV+Q L+E + +L+T+++ H
Sbjct: 269 ASERQIMIDEMLGKTDENEPLQAMMKDQFANYVVQK-LLEVCDDGQ---RDQLLTRMRVH 324
Query: 291 LAALRVMKYG 300
L L+ YG
Sbjct: 325 LGNLKKFTYG 334
>gi|355714560|gb|AES05044.1| pumilio-like protein 1 [Mustela putorius furo]
Length = 1208
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 881 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 938
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 939 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 996
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + +L + +
Sbjct: 997 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPVLEELHQHT 1056
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1057 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1116
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1117 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1171
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1172 ATLRKYTYGKH 1182
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 955 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 1013
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P V+ L + + L+ + G+
Sbjct: 1014 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPEQTLP----VLEELHQHTEQLVQDQYGNY 1067
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1068 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1127
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1128 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 1187
Query: 232 LKY 234
KY
Sbjct: 1188 EKY 1190
>gi|218194334|gb|EEC76761.1| hypothetical protein OsI_14838 [Oryza sativa Indica Group]
Length = 756
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 58/305 (19%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +K+F + L + +G +V KF E ESQL+ +
Sbjct: 462 GSRFIQQKLEVASADDREKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLA--- 518
Query: 63 TFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
DQL FL S +G V+K+I VV L+R + K +
Sbjct: 519 ---DQLRGHFLQLSFQMYGCRVVQKVIDVVD------------LERKISIVGELK---NS 560
Query: 120 ILKCL-EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
+L+C+ + + NH+ LEHC A + ++ I
Sbjct: 561 VLRCISDQNGNHR-------VLEHCHNPAT-------------------QSAVMDEIVER 594
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
A L+ + GNYVVQHVL P +I L G V+LS K S VV+K L + +
Sbjct: 595 AFDLTEDKFGNYVVQHVLEHGRPEERSSIIQKLSGQVVNLSQQKYASNVVEKCLSFGTPD 654
Query: 237 AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
++ E+++S Q Q + D++GNYV+Q +++T L V +++ ++ HL L+
Sbjct: 655 EREGLIREIVSSGQTFQGLMKDQFGNYVVQR-ILQTCDDKFLVV---ILSSIKMHLNELK 710
Query: 296 VMKYG 300
+G
Sbjct: 711 NYTFG 715
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 38/169 (22%)
Query: 168 RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
R++I I NA +L+ GNYV+Q + + LRGH++ LS G V
Sbjct: 478 REKIFPEILTNAIALTTDVFGNYVIQKFFEFATESQLSQLADQLRGHFLQLSFQMYGCRV 537
Query: 228 VQKFLKY-----------------------QNAVHYIVEELLNS-------DQILQVA-- 255
VQK + QN H ++E N D+I++ A
Sbjct: 538 VQKVIDVVDLERKISIVGELKNSVLRCISDQNGNHRVLEHCHNPATQSAVMDEIVERAFD 597
Query: 256 --SDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
DK+GNYV+Q L ++R S+ + KL + L KY SN
Sbjct: 598 LTEDKFGNYVVQHVLEHGRPEERSSI----IQKLSGQVVNLSQQKYASN 642
>gi|74208592|dbj|BAE37556.1| unnamed protein product [Mus musculus]
Length = 980
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 654 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 713
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 714 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 762
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 763 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 822
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 823 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 882
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 883 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 936
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 937 KIRPHITTLRKYTYGKH 953
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 728 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 785
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 786 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 840
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 841 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 900
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 901 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 960
Query: 234 Y 234
Y
Sbjct: 961 Y 961
>gi|237649083|ref|NP_001153692.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|237649085|ref|NP_001153693.1| pumilio homolog 2 isoform 2 [Mus musculus]
gi|74200874|dbj|BAE24797.1| unnamed protein product [Mus musculus]
Length = 1064
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 738 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 797
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 798 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 846
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 847 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 906
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 907 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 966
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 967 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1020
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1021 KIRPHITTLRKYTYGKH 1037
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 812 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 869
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 870 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 924
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 925 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 984
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 985 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1044
Query: 234 Y 234
Y
Sbjct: 1045 Y 1045
>gi|237649087|ref|NP_001153694.1| pumilio homolog 2 isoform 3 [Mus musculus]
gi|27692665|gb|AAH41773.1| Pum2 protein [Mus musculus]
Length = 985
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 659 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 718
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 719 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 767
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 768 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 827
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 828 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 887
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 888 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 941
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 942 KIRPHITTLRKYTYGKH 958
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 733 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 790
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 791 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 845
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 846 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 905
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 906 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 965
Query: 234 Y 234
Y
Sbjct: 966 Y 966
>gi|28972107|dbj|BAC65507.1| mKIAA0235 protein [Mus musculus]
Length = 969
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 643 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 702
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 703 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 751
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 752 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 811
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 812 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 871
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 872 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 925
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 926 KIRPHITTLRKYTYGKH 942
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 717 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 774
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 775 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 829
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 830 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 889
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 890 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 949
Query: 234 Y 234
Y
Sbjct: 950 Y 950
>gi|157818169|ref|NP_001100185.1| pumilio homolog 2 [Rattus norvegicus]
gi|149050904|gb|EDM03077.1| pumilio 2 (Drosophila) [Rattus norvegicus]
Length = 1061
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 73/317 (23%), Positives = 137/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 735 QHGSRFIQQKLERATPAERQMVFNEIVQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAN 794
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 795 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 843
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 844 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 903
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 904 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 963
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 964 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1017
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 1018 KIRPHITTLRKYTYGKH 1034
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 809 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 866
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L + ++L + + G+ VI
Sbjct: 867 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQ----DQYGNYVI 921
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE I L L+ H+ + + + + R ++ +
Sbjct: 922 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 981
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 982 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1041
Query: 234 Y 234
Y
Sbjct: 1042 Y 1042
>gi|407038528|gb|EKE39174.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
nuttalli P19]
Length = 222
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 16/206 (7%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALE--HCLYLACHEQGCINLNNFIDNMKGSR 167
L+ G+ VI +CL+ N FI+ A + + + +A H+ GC + ID
Sbjct: 13 LIFDSNGNHVIQECLKTFGKSDNGFIFDAIVSDGNLVKVATHKHGCCVVQRCID---YGN 69
Query: 168 RKQILHLISV---NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCG 224
R+Q++ LI N+ L + GNYVVQ++LN++ +I + L +DLS+ K
Sbjct: 70 RQQLITLIDEIVKNSLVLVKDAFGNYVVQYILNVDIVGVIIDVTKMLLDDLIDLSMQKFS 129
Query: 225 SFVVQKFLKYQ--NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR 282
S V++K ++ A I + L + ++ D Y NYVIQT L Q + H +
Sbjct: 130 SNVIEKLVRSDEIEARQMIFDRFLQIKDVTKLLQDSYANYVIQTCL----DQSSVEYHSK 185
Query: 283 LVTKLQQHLAALRVMKYGSNKEIQKK 308
L + HL+A+R Y K+IQ K
Sbjct: 186 LSNWIIPHLSAIRNTPYY--KKIQNK 209
>gi|322707325|gb|EFY98904.1| hypothetical protein MAA_06043 [Metarhizium anisopliae ARSEF 23]
Length = 852
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 153/319 (47%), Gaps = 30/319 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 468 QHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQVQKKVLAE 527
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ + + SV + V+K ++ +V Q L + + R+ + + G+
Sbjct: 528 KMKGK---VVDLSVQVYACRVVQKALEHVLVEQQAELTKELEPEILRVIR----DQNGNH 580
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DFI A LA H GC + +++ S + +I+ + +
Sbjct: 581 VVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKMEIMMELHAS 640
Query: 179 AASLSRHRSGNYVVQHVLNLEDPF----LIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
A L + GNYV QHV+ P +ID + L + LS K S VV+K +++
Sbjct: 641 AQILITDQYGNYVAQHVIQNGKPEDRAQMIDLVMSQL----LTLSKHKFASNVVEKCIEH 696
Query: 235 QNAVHY--IVEEL--LNSD---QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
A I E+L + SD + Q+ D+YGNYVIQ L + ++R + LV ++
Sbjct: 697 GTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEGRER----EMLVEEI 752
Query: 288 QQHLAALRVMKYGSNKEIQ 306
+ AL+ K G+++++Q
Sbjct: 753 KPQFYALK--KNGTSRQLQ 769
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ + Q+ I NA L + GNYVVQ +
Sbjct: 460 HLVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQ 519
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN-----SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE+ +IL+V
Sbjct: 520 VQKKVLAEKMKGKVVDLSVQVYACRVVQKALE-----HVLVEQQAELTKELEPEILRVIR 574
Query: 257 DKYGNYVIQTALVETMRQ 274
D+ GN+V+Q + RQ
Sbjct: 575 DQNGNHVVQKIIELVPRQ 592
>gi|48716356|dbj|BAD22967.1| pumilio-like [Oryza sativa Japonica Group]
gi|125541647|gb|EAY88042.1| hypothetical protein OsI_09469 [Oryza sativa Indica Group]
gi|125584167|gb|EAZ25098.1| hypothetical protein OsJ_08892 [Oryza sativa Japonica Group]
Length = 1001
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 147/314 (46%), Gaps = 34/314 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES---QLALII 59
GS+++Q+KL + + D +F + LM+ +G +V KF E E QLA ++
Sbjct: 681 GSRFIQQKLETASAEEKDTIFPEILPQARTLMTDVFGNYVIQKFFEYGTEPQKKQLASLL 740
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFL--MMTKPGS 117
Q S+ +G ++K +++V + AL+ + + + G+
Sbjct: 741 KGYVLQ------LSLQMYGCRVIQKALEMVE----VEQQTQMALELDGNIMKCVRDQNGN 790
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFI-----DNMKGSRRKQIL 172
VI KC+E + FI A H + L+ H GC + + +N + + ++I+
Sbjct: 791 HVIQKCIECIPQERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIM 850
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ + L+ + GNYV+QHVL P AI L G V +S K S VV+K L
Sbjct: 851 QSVVL----LTLDQYGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEKCL 906
Query: 233 KYQNAVHY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ + ++ E+L + ++ LQ + D++ NYV+Q L Q+R + ++++
Sbjct: 907 SFGSPEERQILINEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQNR----ELILSR 962
Query: 287 LQQHLAALRVMKYG 300
++ HL AL+ YG
Sbjct: 963 IKVHLNALKRYTYG 976
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
+ L L+ GC + ++ ++ ++ Q+ + N R ++GN+V+Q +
Sbjct: 743 YVLQLSLQMYGCRVIQKALEMVEVEQQTQMALELDGNIMKCVRDQNGNHVIQKCIECIPQ 802
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDK 258
I I A GH V+LS G V+Q+ L++ +N ++EE++ S +L + D+
Sbjct: 803 ERIRFIISAFYGHVVELSTHPYGCRVIQRVLEHCNDENTQSTMMEEIMQSVVLLTL--DQ 860
Query: 259 YGNYVIQTALVETMRQDRLSVHQRLVTKL----QQHLAALRVMK---YGSNKEIQ 306
YGNYVIQ L +R ++ ++L ++ QQ A+ V K +GS +E Q
Sbjct: 861 YGNYVIQHVLQHGKPDERSAIIKQLAGQIVKMSQQKFASNVVEKCLSFGSPEERQ 915
>gi|71746472|ref|XP_822291.1| pumilio RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831959|gb|EAN77463.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 585
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 123/283 (43%), Gaps = 28/283 (9%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L D I + + ELM+ QY F+ K +
Sbjct: 232 QHGCRFLQRLLCDPEADCEIPRTIMSEIVPHVAELMTDQYANFLVQKLFD---------- 281
Query: 59 ILKITFQDQLFLLASV----------DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFK 108
I +D + +A V G+ SV+K+I+ ++ L+ + AL +
Sbjct: 282 ---IMPKDVRYSVACVAAPKIAAIALTPHGTFSVQKMIETISSREELVI-IREALSKDVV 337
Query: 109 FLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 168
L+ G+ I K L+ +F+Y A C+ +A ++QGC L ++ ++R
Sbjct: 338 RLVKDANGNHAIQKVLQLFEPDDKEFVYAAVAVDCITIAKNKQGCCVLQRCLEYASPAQR 397
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
++ I ++ GNYV+Q+V++ D ID I A H V L + K S V+
Sbjct: 398 STLVRHILECCLQIAEDPYGNYVLQYVISAGDSKTIDTIAIAFLPHLVQLCMNKFSSNVM 457
Query: 229 QKFLKYQNAV--HYIVEELLNSDQILQVASDKYGNYVIQTALV 269
+K L + + V+ + + ++ D +GNYV+QTAL
Sbjct: 458 EKVLCRVSPLVQEMYVDTMCTPEVAARLIQDDFGNYVLQTALT 500
>gi|195153222|ref|XP_002017528.1| GL22345 [Drosophila persimilis]
gi|194112585|gb|EDW34628.1| GL22345 [Drosophila persimilis]
Length = 675
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 258 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 317
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G + K ++ + SP ++ L + + G+ V+
Sbjct: 318 QV--KGHVLQLA-LQMYGCRVIHKGLESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 372
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + N
Sbjct: 373 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHENTE 432
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 433 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 488
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+
Sbjct: 489 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---KKLMTKIRPHMT 544
Query: 293 ALRVMKYG 300
ALR YG
Sbjct: 545 ALRKYTYG 552
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + + H L LA GC ++ ++++ ++++I+H +
Sbjct: 296 GNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIHKGLESISPEQQQEIVHEL 355
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + ++GN+VVQ + DP + I A +G LS G V+Q+ L++
Sbjct: 356 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHC 415
Query: 236 NA--VHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
A I++EL N++Q++Q D+YGNYVIQ L E +Q+ S+ L+ ++ +
Sbjct: 416 TAEQTTPILDELHENTEQLIQ---DQYGNYVIQHVL-EHGKQEDKSI---LINSVRGKVL 468
Query: 293 ALRVMKYGSN 302
L K+ SN
Sbjct: 469 VLSQHKFASN 478
>gi|307187049|gb|EFN72338.1| Maternal protein pumilio [Camponotus floridanus]
Length = 787
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 19/307 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 430 QHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPEQKSTLAQ 489
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ +A P ++ L + + G+ V+
Sbjct: 490 KV--RGHVLPLA-LQMYGCRVIQKALESIA--PEQQQEIVRELDGHVLKCVKDQNGNHVV 544
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 545 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQELHAATD 604
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 605 QLIQDQYGNYVIQHVLEHGKPEDKAQLIGSVRGKVLALSQHKFASNVVEKCVTHATRQER 664
Query: 237 AVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 665 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKILMH-----KIRPHLGS 717
Query: 294 LRVMKYG 300
LR YG
Sbjct: 718 LRKYTYG 724
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 10/190 (5%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + Q H L LA GC + ++++ ++++I+ +
Sbjct: 468 GNYVIQKFFEYGTPEQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIAPEQQQEIVREL 527
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + ++GN+VVQ + +P + + A G LS G V+Q+ L++
Sbjct: 528 DGHVLKCVKDQNGNHVVQKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHC 587
Query: 236 NA--VHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
A I++EL +DQ++Q D+YGNYVIQ L +D+ +L+ ++ +
Sbjct: 588 TAEQTQGILQELHAATDQLIQ---DQYGNYVIQHVLEHGKPEDKA----QLIGSVRGKVL 640
Query: 293 ALRVMKYGSN 302
AL K+ SN
Sbjct: 641 ALSQHKFASN 650
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I +A SL GNYV+Q P
Sbjct: 422 HIVEFSQDQHGSRFIQQKLERASANEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTP 481
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 482 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIAPEQQQEIVREL--DGHVLKCVKDQN 539
Query: 260 GNYVIQ 265
GN+V+Q
Sbjct: 540 GNHVVQ 545
>gi|158828234|gb|ABW81111.1| putative pumilio Mpt5 [Boechera divaricarpa]
Length = 975
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E Q + K+
Sbjct: 651 GSRFIQQKLETATTDEKNMVYEEIMPQALALMTDVFGNYVIQKFFEHGLPPQRRELADKL 710
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
D + L S+ +G ++K I+VV L + +K L +M + G+ V
Sbjct: 711 L--DNVLPL-SLQMYGCRVIQKAIEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHV 762
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVN 178
+ KC+E +FI + + L+ H GC + +++ + +++ I
Sbjct: 763 VQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMEEIMST 822
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYV+QHVL P I L G V +S K S VV+K L +
Sbjct: 823 VSMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPE 882
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++T+++ HL
Sbjct: 883 ERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILTRIKVHLN 938
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 939 ALKKYTYG 946
>gi|356542325|ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1033
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 711 GSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQKRELANKL 770
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 771 LGH---VLALSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRCVRDQNGNHV 822
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E FI + + L+ H GC + +++ K +Q ++ I
Sbjct: 823 IQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGA 882
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P +I L G V +S K S VV+K L +
Sbjct: 883 VSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPS 942
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++ +++ HL
Sbjct: 943 ERQLLVCEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILYRIKVHLN 998
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 999 ALKKYTYG 1006
>gi|227430382|ref|NP_001153075.1| pumilio homolog 1 isoform 2 [Mus musculus]
gi|29748037|gb|AAH50747.1| Pum1 protein [Mus musculus]
Length = 1186
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 860 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|74184013|dbj|BAE37045.1| unnamed protein product [Mus musculus]
Length = 1108
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 782 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 839
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 840 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 889
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 890 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 949
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 950 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1009
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1010 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1064
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1065 KIRPHIATLRKYTYGKH 1081
>gi|74180360|dbj|BAE32346.1| unnamed protein product [Mus musculus]
Length = 1092
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 766 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 823
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 824 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 873
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 874 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 933
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 934 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 993
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 994 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1048
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1049 KIRPHIATLRKYTYGKH 1065
>gi|354472365|ref|XP_003498410.1| PREDICTED: pumilio homolog 1 isoform 4 [Cricetulus griseus]
Length = 1107
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 781 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 838
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 839 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 888
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 889 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 948
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 949 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1008
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1009 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1063
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1064 KIRPHIATLRKYTYGKH 1080
>gi|354472363|ref|XP_003498409.1| PREDICTED: pumilio homolog 1 isoform 3 [Cricetulus griseus]
Length = 943
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 617 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 674
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 675 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 724
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 725 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 784
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 785 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 844
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 845 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 899
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 900 KIRPHIATLRKYTYGKH 916
>gi|354472359|ref|XP_003498407.1| PREDICTED: pumilio homolog 1 isoform 1 [Cricetulus griseus]
Length = 1185
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 859 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 916
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 917 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 966
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 967 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1026
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1027 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1086
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1087 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1141
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1142 KIRPHIATLRKYTYGKH 1158
>gi|348571016|ref|XP_003471292.1| PREDICTED: pumilio homolog 1-like isoform 3 [Cavia porcellus]
Length = 944
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 618 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 675
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 676 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 725
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 726 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 785
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 786 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 845
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 846 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 900
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 901 KIRPHIATLRKYTYGKH 917
>gi|348571012|ref|XP_003471290.1| PREDICTED: pumilio homolog 1-like isoform 1 [Cavia porcellus]
Length = 1186
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 860 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|227430388|ref|NP_001153078.1| pumilio homolog 1 isoform 5 [Mus musculus]
Length = 944
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 618 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 675
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 676 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 725
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 726 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 785
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 786 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 845
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 846 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 900
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 901 KIRPHIATLRKYTYGKH 917
>gi|148698189|gb|EDL30136.1| pumilio 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1215
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 889 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 946
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 947 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 996
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 997 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1056
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1057 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1116
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1117 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1171
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1172 KIRPHIATLRKYTYGKH 1188
>gi|326328009|pdb|3Q0Q|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nrea
gi|326328011|pdb|3Q0R|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With P38alpha Nreb
gi|326328013|pdb|3Q0S|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio2 In Complex With Erk2 Nre
Length = 351
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 135/311 (43%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 33 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 92
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 93 RIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 149
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 150 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 209
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 210 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 269
Query: 240 -YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 270 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 323
Query: 292 AALRVMKYGSN 302
LR YG +
Sbjct: 324 TTLRKYTYGKH 334
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 99/243 (40%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 107 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 165
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L L + + L+ + G+
Sbjct: 166 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPIL----EELHQHTEQLVQDQYGNY 219
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI LE I L L+ H+ + + + + R ++ +
Sbjct: 220 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQ 279
Query: 179 AA-------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ + + NYVVQ ++++ +P I +R H L G ++ K
Sbjct: 280 NDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKL 339
Query: 232 LKY 234
KY
Sbjct: 340 EKY 342
>gi|413921571|gb|AFW61503.1| hypothetical protein ZEAMMB73_884166 [Zea mays]
Length = 441
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 26/245 (10%)
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
FQ Q F+LA V +L + + L HVM ++ + G+ VI K
Sbjct: 196 NFQSQDFMLAL-------EVMELDQKIDLVHELDGHVMRCVR--------DQNGNHVIQK 240
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNAAS 181
C+E F+ A L+ H GC + +++ G+ + Q I+ I +A
Sbjct: 241 CIECVPTEHIGFVVSAFQGQVASLSMHPYGCRVIQRVLEHCGGTSQSQCIVDEILQSACV 300
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA---- 237
L++ + GNYV QHVL + I L G V +S K S V++K ++ +
Sbjct: 301 LAQDQYGNYVTQHVLERGNAHERSQIIIKLAGQVVTMSQNKFASNVIEKCFQHGDMAERD 360
Query: 238 --VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALR 295
+ IVE+ +D +L + D+Y NYV+Q ++ET +++ + LV++++ H+ ALR
Sbjct: 361 LLIRQIVEQTEGNDNLLAMMKDQYANYVVQK-ILETCNENQREL---LVSRVKGHMQALR 416
Query: 296 VMKYG 300
YG
Sbjct: 417 KYTYG 421
>gi|356538980|ref|XP_003537978.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1047
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 725 GSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKL 784
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 785 LGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRCVRDQNGNHV 836
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E DFI + + L+ H GC + +++ + +Q ++ I
Sbjct: 837 IQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTTQQKVMDEILGA 896
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL +I L G V +S K S VV+K L +
Sbjct: 897 VSMLAQDQYGNYVVQHVLEHGKSHERSSIIKELAGKIVQMSQQKFASNVVEKCLTFGGPS 956
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL
Sbjct: 957 ERQLLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLN 1012
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1013 ALKKYTYG 1020
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 104/239 (43%), Gaps = 23/239 (9%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLY-----HVMSALKRLFKFLMMTKPGSSVILKCLEP 126
S D++GS ++ KL + ++Y H ++ + +F G+ V+ K E
Sbjct: 720 SADQYGSRFIQQKLETATTEEKKMVYQEIMPHALALMTDVF--------GNYVVQKFFEH 771
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + L H L L+ GC + I+ + ++ +++ + N R +
Sbjct: 772 GLASQRRELANKLLGHVLTLSLQMYGCRVIQKAIEVVDLDQKIEMVQELDGNVMRCVRDQ 831
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVE 243
+GN+V+Q + ID I V LS G V+Q+ L++ +++
Sbjct: 832 NGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCEDPTTQQKVMD 891
Query: 244 ELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
E+L + +L A D+YGNYV+Q L +R S+ + L K+ Q + K+ SN
Sbjct: 892 EILGAVSML--AQDQYGNYVVQHVLEHGKSHERSSIIKELAGKIVQ----MSQQKFASN 944
>gi|328698836|ref|XP_001950648.2| PREDICTED: pumilio homolog 2-like isoform 1 [Acyrthosiphon pisum]
Length = 983
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 35/315 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 654 QHGSRFIQQKLERASTPEKQLVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKSTLAQ 713
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
K+ L ++ +G ++K ++ V L HV+ +K +
Sbjct: 714 KVRGH---VLPLALQMYGCRVIQKALESVGGEQQVEIVRELDGHVLKCVK--------DQ 762
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E H FI A L L+ H GC + +++ + IL
Sbjct: 763 NGNHVVQKCIECVDPHALQFIINAFQGQVLTLSTHPYGCRVIQRILEHCTSEQTAPILDE 822
Query: 175 ISVNAASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ + L + + GNYV+QHVL ED + IC ++RG + LS K S VV+K
Sbjct: 823 MHQHVEQLIQDQYGNYVIQHVLEHGKQEDKSKL--IC-SVRGKVLTLSQHKFASNVVEKC 879
Query: 232 LKY--QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ + ++ ++EE+ N + + + D+Y NYV+Q L D QR L+
Sbjct: 880 VTHATRSERSMLIEEVCGFNDNALHVMMKDQYANYVVQKML------DVCESSQRKVLMH 933
Query: 286 KLQQHLAALRVMKYG 300
K++ H A+LR YG
Sbjct: 934 KIRPHFASLRKYTYG 948
>gi|440491702|gb|ELQ74316.1| Translational repressor Pumilio/PUF3, RNA-binding proteins (Puf
superfamily) [Trachipleistophora hominis]
Length = 557
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 143/304 (47%), Gaps = 28/304 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTF-ELMSGQYGRFVFGKFIESCNESQLALII 59
+EGS+++Q++L ++ W+V EL +G +V K IE N I
Sbjct: 267 QEGSRFIQKRLELSTE---EEWIWLVKHIRIKELCIDLFGNYVIQKLIE--NRECHGYIT 321
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLI-KVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ + + SV+ FG V++L+ + V + + LK L+ G+
Sbjct: 322 ---QYLEGCYKEMSVNAFGCRVVQRLLDEDVNEESEYYRRIADELKAHILDLVYDSNGNH 378
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E + +N F C+ L+ H+ GC L + + S I++ + N
Sbjct: 379 VVQKIVERKIDFENVF-----YNDCIQLSNHKYGCRVLQKLFEKNESS---TIINKLIDN 430
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QN 236
L+ ++ GNYV+QH++ ++ +L+ + L + SL K S V++K +K +
Sbjct: 431 CLDLAENQYGNYVLQHIITIKHEYLV-RVSDILSPYIFSFSLHKFASNVIEKIIKMCDEK 489
Query: 237 AVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
++ I+++LL ++ I++++ DKY NYV+Q L R +R+V L ++ LR
Sbjct: 490 QLNGILDDLLANNSIVKMSMDKYANYVVQRILESKSR-------ERVVNVLMANINELRN 542
Query: 297 MKYG 300
Y
Sbjct: 543 CVYS 546
>gi|291399423|ref|XP_002716108.1| PREDICTED: pumilio 1-like isoform 1 [Oryctolagus cuniculus]
Length = 1186
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 860 QHGSRFIQLKLERATTAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|189242503|ref|XP_967865.2| PREDICTED: similar to pumilio [Tribolium castaneum]
Length = 718
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 33/314 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q +
Sbjct: 388 QHGSRFIQQKLERASATEKQMVFNEILSAAYNLMTDVFGNYVIQKFFEFGTAEQKTTLAQ 447
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
K+ + + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 448 KV--RGHVLPLA-LQMYGCRVIQKALESI---PPEQQQEIVRELDGHVLKCVK------- 494
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E + FI Q+ L+ H GC + +++ + I
Sbjct: 495 -DQNGNHVVQKCIECVDPNALQFIIQSFSGQVYTLSTHPYGCRVIQRILEHCTPEQTAPI 553
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + + L + + GNYV+QHVL P + ++RG + LS K S VV+K
Sbjct: 554 LAELHQHTDQLIQDQFGNYVIQHVLEHGKPEDKSQLISSVRGKVLALSQHKFASNVVEKC 613
Query: 232 LKYQNAVHY--IVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ + ++EE+ N + + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 614 VTHATRAERALLIEEVCGFNDNALHVMMKDQYANYVVQKMIDVSEPTQRKVLMH-----K 668
Query: 287 LQQHLAALRVMKYG 300
++ HL +LR YG
Sbjct: 669 IRPHLNSLRKYTYG 682
>gi|8071634|gb|AAF71823.1|AF153276_1 pumilio domain-containing protein PPD1 [Populus tremula x Populus
tremuloides]
Length = 966
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 144/306 (47%), Gaps = 32/306 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + + +F V +LM+ +G +V KF E + Q +
Sbjct: 676 QHGSRFIQQKLENCNVEEKESVFKEVLPHAPKLMTDVFGNYVIQKFFEHGSPEQRIELAE 735
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV--------AQSPPLLYHVMSALKRLFKFLMM 112
K++ Q L S+ +G ++K ++V+ AQ L HVM +
Sbjct: 736 KLSGQ---ILQLSLQMYGCRVIQKALEVIELDQKAKLAQE--LDGHVMRCVH-------- 782
Query: 113 TKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-I 171
+ G+ VI KC+E +FI A + L+ H GC + +++ + Q I
Sbjct: 783 DQNGNHVIQKCIECVPAEHIEFIISAFRGQVVTLSTHPYGCRVIQRVLEHCSDELQSQCI 842
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ I ++ L++ + GNYV QHVL P I L G V +S K S VV+K
Sbjct: 843 VDEILESSYLLAQDQYGNYVTQHVLERGKPHERSQIISKLTGKIVQMSQHKYASNVVEKC 902
Query: 232 LKYQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVT 285
LK+ +A + I+ + ++D +L + D++ NYV+Q ++ET + + L++
Sbjct: 903 LKHADATERELMIGEIIGQSEDNDNLLIMMKDQFANYVVQK-ILETSNDKQKEI---LLS 958
Query: 286 KLQQHL 291
++ HL
Sbjct: 959 RINAHL 964
>gi|332017050|gb|EGI57849.1| Maternal protein pumilio [Acromyrmex echinatior]
Length = 630
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 19/307 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E + Q + +
Sbjct: 275 QHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTQEQKSTLAQ 334
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 335 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 389
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL +
Sbjct: 390 QKCIECVEPRALQFVIGAFAGQVYSLSTHPYGCRVIQRILEHCTAEQTQGILQELHAATD 449
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QN 236
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 450 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVTHATRQER 509
Query: 237 AVHYIVEELLN-SDQILQV-ASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
AV ++EE+ +D L V D+Y NYV+Q + V Q ++ +H K++ HL +
Sbjct: 510 AV--LIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGS 562
Query: 294 LRVMKYG 300
LR YG
Sbjct: 563 LRKYTYG 569
>gi|390179099|ref|XP_002137873.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859712|gb|EDY68431.2| GA30209, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 907
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 151/317 (47%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 490 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 549
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 550 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 604
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + N
Sbjct: 605 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHENTE 664
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 665 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 720
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+
Sbjct: 721 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMT 776
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 777 ALRKYTYGKHINAKLEK 793
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
L H + + + G + ++ + ++ + I A SL GNYV+Q
Sbjct: 480 LNHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFG 539
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASD 257
P + + ++GH + L+L G V+QK L+ IV EL +L+ D
Sbjct: 540 TPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKD 597
Query: 258 KYGNYVIQ 265
+ GN+V+Q
Sbjct: 598 QNGNHVVQ 605
>gi|307210859|gb|EFN87212.1| Maternal protein pumilio [Harpegnathos saltator]
Length = 627
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 139/305 (45%), Gaps = 15/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 275 QHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTPEQKSTLAQ 334
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ + + LA + +G ++K ++ + P ++ L + + G+ V+
Sbjct: 335 KV--RGHVLPLA-LQMYGCRVIQKALESIG--PEQQQEIVRELDGHVLKCVKDQNGNHVV 389
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL + +
Sbjct: 390 QKCIECVEPRALQFVIGAFTGQVFALSTHPYGCRVIQRILEHCTPEQTQGILQELHASTD 449
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L + + GNYV+QHVL P + ++RG + LS K S VV+K + + +
Sbjct: 450 QLIQDQYGNYVIQHVLEHGKPEDKAQLISSVRGKVLALSQHKFASNVVEKCVTHATRQER 509
Query: 239 HYIVEELLN-SDQILQV-ASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAALR 295
++EE+ +D L V D+Y NYV+Q + V Q ++ +H K++ HL +LR
Sbjct: 510 AILIEEVCGFNDNALNVMMKDQYANYVVQKMIDVAEPAQRKVLMH-----KIRPHLGSLR 564
Query: 296 VMKYG 300
YG
Sbjct: 565 KYTYG 569
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ S ++ + I +A SL GNYV+Q P
Sbjct: 267 HIVEFSQDQHGSRFIQQKLERASASEKQLVFQEILSSAYSLMTDVFGNYVIQKFFEYGTP 326
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ +RGH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 327 EQKSTLAQKVRGHVLPLALQMYGCRVIQKALESIGPEQQQEIVREL--DGHVLKCVKDQN 384
Query: 260 GNYVIQ 265
GN+V+Q
Sbjct: 385 GNHVVQ 390
>gi|5263312|gb|AAD41414.1|AC007727_3 Contains 3 PF|00806 Pumilio-family RNA binding domains (PUF)
[Arabidopsis thaliana]
Length = 252
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 32/234 (13%)
Query: 43 FGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSA 102
F + I ++ +L + +T FL+ + + GS ++KL+ L +A
Sbjct: 12 FEEMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAA 68
Query: 103 LKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN 162
+ R F ++ K S V+ + + K +Y EH L+ A H
Sbjct: 69 ILRRFLHIITDKYASYVVRRGMTVFDKKKKKAMY----EHILHYASH------------- 111
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
+R K A LS GN+V+Q VL L D + I +LRGH+VDLS K
Sbjct: 112 --IARDKH--------ALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQK 161
Query: 223 CGSFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQ 274
GS+VV L+ + ++ +VEEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 162 YGSYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 215
>gi|15131678|emb|CAC48394.1| putative RNA binding protein [Saprolegnia parasitica]
Length = 773
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 20/294 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + I D +F + LM+ +G +V KF + L+L++
Sbjct: 454 QHGSRFIQQKLETAKADIKDIVFAEIYPVALTLMTDVFGNYVIQKFFDFGTSHHLSLLLR 513
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I+ + L ++ +G ++K +++ ++ P H++S L + + G+ V+
Sbjct: 514 TISGR---VLELALQMYGCRVIQKALEL--KNMPEKLHLISELTGHVLKCVKDQNGNHVV 568
Query: 121 LKCLE------PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
KC+E P FI A L + LA H GC + +++ ++ IL
Sbjct: 569 QKCIEILPWKTPVAMDVGGFILSAFLGNVYSLATHPYGCRVIQRVLEHCTEAQMAPILKE 628
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I L + GNYV+QHVL P + + V S K S V++K L Y
Sbjct: 629 IHDCCCLLVEDQYGNYVIQHVLEHGQPSERSQVINKVYPDIVRFSYHKFASNVIEKCLMY 688
Query: 235 QNA--VHYIVEELLNSDQ----ILQV-ASDKYGNYVIQT--ALVETMRQDRLSV 279
+ +H IV ++ +++ LQV D+Y NYV+Q + + ++R+ V
Sbjct: 689 ASVHQLHVIVAHVMEANERGECPLQVMMKDQYANYVVQKLIDVADAEERERMXV 742
>gi|449496651|ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E L +
Sbjct: 718 GSRFIQQKLETATADXKNMIYQEIMPQALALMTDVFGNYVIQKFFEH------GLAAQRR 771
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
++LF L S+ +G ++K I+VV L + + L +M + G
Sbjct: 772 ELANKLFGHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVGELDGHVMRCVRDQNG 826
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 175
+ VI KC+E FI + + L+ H GC + +++ K + + +++ I
Sbjct: 827 NHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDETTQSRVMEEI 886
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + L++ + GNYVVQHVL AI L G V +S K S VV+K L +
Sbjct: 887 LGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVEKCLTFG 946
Query: 236 NAVHY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++
Sbjct: 947 GPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKV 1002
Query: 290 HLAALRVMKYG 300
HL AL+ YG
Sbjct: 1003 HLNALKKYTYG 1013
>gi|183233559|ref|XP_655386.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801513|gb|EAL49999.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 528
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+ + G K++ + EL S + +V K IE ES+ ++ K+
Sbjct: 223 GSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESR-HIVPQKM 281
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L ++ +G V+K ++ + L + L++ + + G+ VI K
Sbjct: 282 KGN---VLRLTLHMYGCRVVQKAVEYASMKDRRL--LFEELRKSLVRCIEDQNGNHVIQK 336
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E I A L H GC + I+++ ++L +I ++ L
Sbjct: 337 CVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDL 396
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
+ + GNYVVQ+VL P I ++G+ V LS+ K S V++K K+ QN
Sbjct: 397 TEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATQNERQQ 456
Query: 241 IVEELLNSDQILQVASDKYGNYVIQ 265
I+EE+ ++ ILQ+ D++ NYV+Q
Sbjct: 457 ILEEIYQNNGILQMMQDQFANYVVQ 481
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E P H + Q + L L H GC + ++ R+ + +
Sbjct: 262 VIQKAIEFIPESRH---IVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELR 318
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ ++GN+V+Q + D ++ I AL+G ++ G VVQ+ ++
Sbjct: 319 KSLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE--- 375
Query: 237 AVHY-IVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V Y V ELL L + D+YGNYV+Q L DR ++ Q +++ ++
Sbjct: 376 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQ----QIKGNIVR 431
Query: 294 LRVMKYGSN 302
L + KY SN
Sbjct: 432 LSMGKYSSN 440
>gi|449708558|gb|EMD47999.1| pumilio, putative, partial [Entamoeba histolytica KU27]
Length = 499
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+ + G K++ + EL S + +V K IE ES+ I+
Sbjct: 194 GSRTVQQSIEKGSEDERQKIWRTLQEHVVELSSDLFANYVIQKAIEFIPESRH---IVPQ 250
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + L ++ +G V+K ++ + L + L++ + + G+ VI K
Sbjct: 251 KMKGNVLRL-TLHMYGCRVVQKAVEYASMKDRRL--LFEELRKSLVRCIEDQNGNHVIQK 307
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E I A L H GC + I+++ ++L +I ++ L
Sbjct: 308 CVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDL 367
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
+ + GNYVVQ+VL P I ++G+ V LS+ K S V++K K+ QN
Sbjct: 368 TEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATQNERQQ 427
Query: 241 IVEELLNSDQILQVASDKYGNYVIQ 265
I+EE+ ++ ILQ+ D++ NYV+Q
Sbjct: 428 ILEEIYQNNGILQMMQDQFANYVVQ 452
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E P H + Q + L L H GC + ++ R+ + +
Sbjct: 233 VIQKAIEFIPESRH---IVPQKMKGNVLRLTLHMYGCRVVQKAVEYASMKDRRLLFEELR 289
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ ++GN+V+Q + D ++ I AL+G ++ G VVQ+ ++
Sbjct: 290 KSLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE--- 346
Query: 237 AVHY-IVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V Y V ELL L + D+YGNYV+Q L DR ++ Q +++ ++
Sbjct: 347 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQ----QIKGNIVR 402
Query: 294 LRVMKYGSN 302
L + KY SN
Sbjct: 403 LSMGKYSSN 411
>gi|395526796|ref|XP_003765542.1| PREDICTED: pumilio homolog 1 isoform 3 [Sarcophilus harrisii]
Length = 946
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 620 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 677
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 678 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 726
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 727 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 784
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 785 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 844
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQR 282
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 845 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-- 902
Query: 283 LVTKLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 903 ---KIRPHIATLRKYTYGKH 919
>gi|395526792|ref|XP_003765540.1| PREDICTED: pumilio homolog 1 isoform 1 [Sarcophilus harrisii]
Length = 1188
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 862 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 919
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 920 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 968
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 969 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1026
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1027 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1086
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQR 282
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1087 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-- 1144
Query: 283 LVTKLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1145 ---KIRPHIATLRKYTYGKH 1161
>gi|334329173|ref|XP_003341194.1| PREDICTED: pumilio homolog 1 isoform 3 [Monodelphis domestica]
Length = 946
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 620 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 677
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 678 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 726
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 727 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 784
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 785 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 844
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQR 282
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 845 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-- 902
Query: 283 LVTKLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 903 ---KIRPHIATLRKYTYGKH 919
>gi|327286697|ref|XP_003228066.1| PREDICTED: pumilio homolog 1-like isoform 1 [Anolis carolinensis]
Length = 1184
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 858 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 915
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 916 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 964
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 965 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1022
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1023 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1082
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQR 282
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1083 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-- 1140
Query: 283 LVTKLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1141 ---KIRPHIATLRKYTYGKH 1157
>gi|126330276|ref|XP_001367437.1| PREDICTED: pumilio homolog 1 isoform 1 [Monodelphis domestica]
Length = 1188
Score = 74.3 bits (181), Expect = 6e-11, Method: Composition-based stats.
Identities = 78/320 (24%), Positives = 140/320 (43%), Gaps = 38/320 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 862 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 919
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 920 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 968
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 969 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 1026
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 1027 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 1086
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQR 282
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1087 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-- 1144
Query: 283 LVTKLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1145 ---KIRPHIATLRKYTYGKH 1161
>gi|449500099|ref|XP_004161004.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +L++ +G +V KF E Q +
Sbjct: 698 QHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHEQRKELAD 757
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q L S+ +G ++K ++V+ H++ L + + G+ VI
Sbjct: 758 QLAGQ---ILPLSLQMYGCRVIQKALEVIELD--QKTHLVRELDGHVMRCVRDQNGNHVI 812
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNA 179
KC+E + + DFI + L+ H GC + +++ + Q I+ I +
Sbjct: 813 QKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIVDEILDSV 872
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-- 237
L++ + GNYV+QHVL I L G +V +S K S VV+K L++ +
Sbjct: 873 YGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEKCLEHGDTIE 932
Query: 238 ----VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+ I+ + +D +L + D++ NYV+Q ++E D+ +RL+ +++ HL A
Sbjct: 933 RELIIEEIMGQSEENDTLLAMMKDQFANYVVQ-KIIEICNDDQ---RERLLNRIKGHLQA 988
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 989 LKKYTYG 995
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHY 240
R ++GN+V+Q + ID I + G LS G V+Q+ L++ +
Sbjct: 804 RDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQC 863
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
IV+E+L D + +A D+YGNYVIQ L M +R ++++KL + KY
Sbjct: 864 IVDEIL--DSVYGLAQDQYGNYVIQHVLERGMHHER----SQIISKLTGKFVRMSQHKYA 917
Query: 301 SN 302
SN
Sbjct: 918 SN 919
>gi|327355572|gb|EGE84429.1| mRNA binding protein Pumilio 2 [Ajellomyces dermatitidis ATCC
18188]
Length = 906
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 142/312 (45%), Gaps = 26/312 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + + +LM+ +G +V K E N+SQ ++
Sbjct: 500 QHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 559
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 560 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVNDQNGN 611
Query: 118 SVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
VI K +E P+ + + FI A A H GC + +++ K R+ IL +
Sbjct: 612 HVIQKAVERVPTVHIR--FIINAFKGQVHQWAAHSYGCRVIQRMLEHCKEPDRQAILAEL 669
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
AASL GNYV+QHV+ + I + + S K S VV+K +++
Sbjct: 670 HACAASLIPDTFGNYVIQHVIENGEEHDKAKIISIVISRLLVFSKHKFASNVVEKSIEFG 729
Query: 235 -QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ I+ +L + +L + D+YGNYV+QT L E +R + LV +++
Sbjct: 730 AEGQRTEILRQLTTPNDRGENPLLSLMGDQYGNYVVQTVLGELKGPER----EALVKQIE 785
Query: 289 QHLAALRVMKYG 300
L L+ YG
Sbjct: 786 LQLPELKKTNYG 797
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + + +++ + Q+ I N+ L GNYVVQ + +
Sbjct: 492 HIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNSLQLMTDVFGNYVVQKLFEHGNQ 551
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ +D+
Sbjct: 552 SQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLKCVNDQN 609
Query: 260 GNYVIQTAL 268
GN+VIQ A+
Sbjct: 610 GNHVIQKAV 618
>gi|291238122|ref|XP_002738980.1| PREDICTED: pumilio homolog 2-like [Saccoglossus kowalevskii]
Length = 643
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 139/317 (43%), Gaps = 36/317 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + G + LM+ +G +V KF E Q +
Sbjct: 318 QHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFGTPDQKMALAQ 377
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
++ + + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 378 RV--RGHVLPLA-LQMYGCRVIQKALESI---PPDQQVDIVKELDGHVLKCVK------- 424
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L+ H GC + +++ + I
Sbjct: 425 -DQNGNHVVQKCIECVEPVALQFIIDAFRGQIFVLSTHPYGCRVIQRILEHCTVDQTIPI 483
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + N L + + GNYV+QHVL P I LRG + LS K S VV+K
Sbjct: 484 LEELHDNTERLVQDQYGNYVIQHVLEHGRPEDKSKIVAELRGKVLVLSQHKFASNVVEKC 543
Query: 232 LKYQNAVHY--IVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRL 283
+ + + +++E+++ + A D+Y NYV+Q + V Q R+ L
Sbjct: 544 VTHASRPERALLIDEVISYNDGPHSALYTMMKDQYANYVVQKMIDVSEPGQRRI-----L 598
Query: 284 VTKLQQHLAALRVMKYG 300
+ K++ H+A LR YG
Sbjct: 599 MQKIRPHIATLRKFTYG 615
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
+ H + + + G + ++ + R+ + + I +A +L GNYV+Q
Sbjct: 308 VNHIVEFSQDQHGSRFIQQKLERATPTERQMVFNEILGSAYNLMTDVFGNYVIQKFFEFG 367
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASD 257
P A+ +RGH + L+L G V+QK L+ IV+EL +L+ D
Sbjct: 368 TPDQKMALAQRVRGHVLPLALQMYGCRVIQKALESIPPDQQVDIVKEL--DGHVLKCVKD 425
Query: 258 KYGNYVIQ 265
+ GN+V+Q
Sbjct: 426 QNGNHVVQ 433
>gi|449453445|ref|XP_004144468.1| PREDICTED: pumilio homolog 5-like [Cucumis sativus]
Length = 1031
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F V +L++ +G +V KF E Q +
Sbjct: 698 QHGSRFIQQKLEHCSPEEKASVFKEVLPHASKLITDVFGNYVIQKFFEHGTHEQRKELAD 757
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ Q L S+ +G ++K ++V+ H++ L + + G+ VI
Sbjct: 758 QLAGQ---ILPLSLQMYGCRVIQKALEVIELD--QKTHLVRELDGHVMRCVRDQNGNHVI 812
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVNA 179
KC+E + + DFI + L+ H GC + +++ + Q I+ I +
Sbjct: 813 QKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQCIVDEILDSV 872
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-- 237
L++ + GNYV+QHVL I L G +V +S K S VV+K L++ +
Sbjct: 873 YGLAQDQYGNYVIQHVLERGMHHERSQIISKLTGKFVRMSQHKYASNVVEKCLEHGDTIE 932
Query: 238 ----VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+ I+ + +D +L + D++ NYV+Q ++E D+ +RL+ +++ HL A
Sbjct: 933 RELIIEEIMGQSEENDTLLAMMKDQFANYVVQ-KIIEICNDDQ---RERLLNRIKGHLQA 988
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 989 LKKYTYG 995
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 9/122 (7%)
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHY 240
R ++GN+V+Q + ID I + G LS G V+Q+ L++ +
Sbjct: 804 RDQNGNHVIQKCIECVPSEEIDFIISSFEGQVATLSTHPYGCRVIQRILEHCSDEAQSQC 863
Query: 241 IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
IV+E+L D + +A D+YGNYVIQ L M +R ++++KL + KY
Sbjct: 864 IVDEIL--DSVYGLAQDQYGNYVIQHVLERGMHHER----SQIISKLTGKFVRMSQHKYA 917
Query: 301 SN 302
SN
Sbjct: 918 SN 919
>gi|194744548|ref|XP_001954755.1| GF18428 [Drosophila ananassae]
gi|190627792|gb|EDV43316.1| GF18428 [Drosophila ananassae]
Length = 896
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 147/308 (47%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 463 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 522
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 523 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 577
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 578 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 637
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 638 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 693
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 694 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 749
Query: 293 ALRVMKYG 300
ALR YG
Sbjct: 750 ALRKYTYG 757
>gi|313245253|emb|CBY40040.1| unnamed protein product [Oikopleura dioica]
Length = 525
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 1 EEGSQYLQEKL---SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ GS+++Q+KL + GD ++ F + ++ L+ +G +V KF+E + Q
Sbjct: 207 QHGSRFIQQKLERCTPGDRELV---FNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQRVQ 263
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
++ I L S+ +G ++K ++ + P ++ L+ + + G+
Sbjct: 264 LLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHVLKCVKDQNGN 320
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ K +E + +FI A L+ H GC + +++ + QIL I
Sbjct: 321 HVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQILDEIHP 380
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L+ + GNYVVQH+L I +RG V L+ K S V++K + +
Sbjct: 381 QTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSSR 440
Query: 238 VH--YIVEELLNSDQIL-QVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
+++E+ S + L + D+Y NYV+Q L + M Q R +LV++++ H+
Sbjct: 441 TTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKR-----KLVSQMKPHINN 495
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 496 LKRYTYG 502
>gi|255566430|ref|XP_002524200.1| pumilio, putative [Ricinus communis]
gi|223536477|gb|EEF38124.1| pumilio, putative [Ricinus communis]
Length = 1011
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 149/316 (47%), Gaps = 28/316 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGK------FIESCNESQLA 56
GS+++Q+KL + + + +F + LM+ +G +V K + S E A
Sbjct: 677 GSRFIQQKLETATTEEKNMVFNEIMPQALSLMTDVFGNYVIQKKNHLSIVLSSVFEHGSA 736
Query: 57 LIILKITFQDQLF---LLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLM 111
I ++ DQL L S+ +G ++K I+VV Q ++ + + R +
Sbjct: 737 AQIRELA--DQLIGHVLTLSLQMYGCRVIQKAIEVVELDQQTKMVSELDGHIMRCVR--- 791
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ VI KC+E FI + + L+ H GC + +++ ++ ++I
Sbjct: 792 -DQNGNHVIQKCIECVPEDAIQFIVSTFYDQVVTLSTHPYGCRVIQRVLEHCHDAKTQRI 850
Query: 172 L-HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
+ I + L++ + GNYVVQHVL P +I L G V +S K S V++K
Sbjct: 851 MMDEILQSVLMLAQDQYGNYVVQHVLEHGKPHERSSIIKKLTGQIVQMSQQKFASNVIEK 910
Query: 231 FLKYQNAV--HYIVEELLNS---DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L + A +V E+L + ++ LQV D++ NYV+Q L ET +L + ++
Sbjct: 911 CLTFGTAAERQALVNEMLGTTDENEPLQVMMKDQFANYVVQKVL-ETCDDQQLEL---IL 966
Query: 285 TKLQQHLAALRVMKYG 300
+++ HL AL+ YG
Sbjct: 967 DRIKVHLNALKKYTYG 982
>gi|356538982|ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1049
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 141/308 (45%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 727 GSRFIQQKLETATTEEKNLVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKL 786
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 787 HGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRCVRDQNGNHV 838
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E FI + + L+ H GC + +++ K +Q ++ I
Sbjct: 839 IQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGA 898
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P +I L V +S K S VV+K L +
Sbjct: 899 VSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEKCLTFGGPS 958
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V E+L S ++ LQ + D++ NYV+Q L Q R + ++ +++ HL
Sbjct: 959 ERQLLVSEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILYRIKVHLN 1014
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1015 ALKKYTYG 1022
>gi|74180929|dbj|BAE27746.1| unnamed protein product [Mus musculus]
Length = 944
Score = 73.9 bits (180), Expect = 9e-11, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 618 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 675
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 676 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 725
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + + + + IL
Sbjct: 726 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILGHCLPDQTLPILE 785
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 786 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 845
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 846 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 900
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 901 KIRPHIATLRKYTYGKH 917
>gi|224059464|ref|XP_002299859.1| predicted protein [Populus trichocarpa]
gi|222847117|gb|EEE84664.1| predicted protein [Populus trichocarpa]
Length = 1065
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 144/315 (45%), Gaps = 36/315 (11%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + ++ + LM+ +G +V KF E SQ +
Sbjct: 744 GSRFIQQKLETATMDEKNVVYEEIMPQALPLMTDVFGNYVIQKFFEHGLPSQ------RR 797
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
LF L S+ +G ++K I+VV L + ++ L +M + G
Sbjct: 798 ELAGNLFGHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVEELDGHVMRCVRDQNG 852
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK-----QI 171
+ VI KC+E FI + + L+ H GC + +++ K ++ + +I
Sbjct: 853 NHVIQKCIECIPEDNIQFIVSTFFDQVVNLSTHPYGCRVIQRILEHCKDAKTESKVMDEI 912
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L +S+ L++ + GNYVVQHVL AI L G V +S K S VV+K
Sbjct: 913 LGAVSM----LAQDQYGNYVVQHVLEHGKSHERSAIIKELAGKIVQMSQQKFASNVVEKC 968
Query: 232 LKYQNAVHY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVT 285
L + +V E+L + ++ LQ + D++ NYV+Q L Q R + ++T
Sbjct: 969 LTFSGPAERQILVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILT 1024
Query: 286 KLQQHLAALRVMKYG 300
+++ HL AL+ YG
Sbjct: 1025 RIKVHLNALKKYTYG 1039
>gi|449450756|ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 144/311 (46%), Gaps = 28/311 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E L +
Sbjct: 718 GSRFIQQKLETATADEKNMIYQEIMPQALALMTDVFGNYVIQKFFEH------GLAAQRR 771
Query: 63 TFQDQLF---LLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
++LF L S+ +G ++K I+VV L + + L +M + G
Sbjct: 772 ELANKLFGHVLTLSLQMYGCRVIQKAIEVVD-----LDQKIKMVGELDGHVMRCVRDQNG 826
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG-SRRKQILHLI 175
+ VI KC+E FI + + L+ H GC + +++ K + + +++ I
Sbjct: 827 NHVIQKCIECVPESAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDETTQSRVMEEI 886
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + L++ + GNYVVQHVL AI L G V +S K S VV+K L +
Sbjct: 887 LGSVSMLAQDQYGNYVVQHVLEHGKSHERSAIIKELAGRIVQMSQQKFASNVVEKCLTFG 946
Query: 236 NAVHY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+V E+L + ++ LQ + D++ NYV+Q L Q R + ++++++
Sbjct: 947 GPTERQLLVSEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKV 1002
Query: 290 HLAALRVMKYG 300
HL AL+ YG
Sbjct: 1003 HLNALKKYTYG 1013
>gi|195452258|ref|XP_002073278.1| GK14049 [Drosophila willistoni]
gi|194169363|gb|EDW84264.1| GK14049 [Drosophila willistoni]
Length = 873
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 143/304 (47%), Gaps = 13/304 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 461 QHGSRFIQQKLERATAAEKQMVFSEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 520
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 521 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 575
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 576 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 635
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L + + GNYV+QHVL + ++RG + LS K S VV+K + + +
Sbjct: 636 QLIQDQYGNYVIQHVLEHGKQEDKSILITSVRGKVLVLSQHKFASNVVEKCVTHATRGER 695
Query: 239 HYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+AALR
Sbjct: 696 TGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMAALRK 751
Query: 297 MKYG 300
YG
Sbjct: 752 YTYG 755
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + + H L LA GC + ++++ ++++I+H +
Sbjct: 499 GNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL 558
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + ++GN+VVQ + DP + I A +G LS G V+Q+ L++
Sbjct: 559 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHC 618
Query: 236 NA--VHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
A I++EL +++Q++Q D+YGNYVIQ L E +Q+ S+ L+T ++ +
Sbjct: 619 TAEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVL-EHGKQEDKSI---LITSVRGKVL 671
Query: 293 ALRVMKYGSN 302
L K+ SN
Sbjct: 672 VLSQHKFASN 681
>gi|403332189|gb|EJY65091.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
gi|403345849|gb|EJY72304.1| mRNA binding protein Pumilio 2 [Oxytricha trifallax]
Length = 1648
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 29/282 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS++LQ L + + +I+ L + +M YG + + + +C+ +Q I+
Sbjct: 1021 QTGSKFLQRLLDNANPQIVQFLLDEIQSHLPMVMVDNYGNYFCQELLINCSSAQRMQILE 1080
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFK--------FLMM 112
+I+ F+ +K G+ +++K I +V + A ++ F+ L
Sbjct: 1081 RISVD---FVAICCNKKGTHTIQKFIDLVN---------LEAEEKFFQRVLAGHVALLSS 1128
Query: 113 TKPGSSVI---LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM-KGSRR 168
G+ VI +KC E S K F++ E + LA G + I K R
Sbjct: 1129 DVQGTHVIQNIIKCFEES---KRQFVFDEIYEQFIELATDYSGLSVIKTIISKTHKPENR 1185
Query: 169 KQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVV 228
K+++ + NA L+++ GNY +Q D L I G LSL KC S V+
Sbjct: 1186 KRLMGKLVANAIELAQNPYGNYAIQQSFEHWDKELCQDIIPQFFGKVYQLSLQKCSSNVI 1245
Query: 229 QKFLKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTAL 268
K ++ + I++EL+N +++ + ++ YGN+V+Q AL
Sbjct: 1246 DKCIQNSKPEYLAIIMQELINCERLNNLITNSYGNFVVQNAL 1287
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNL-----EDPFLIDAICFALRGHYV 216
N ++R QIL ISV+ ++ ++ G + +Q ++L E+ F L GH
Sbjct: 1069 NCSSAQRMQILERISVDFVAICCNKKGTHTIQKFIDLVNLEAEEKFF----QRVLAGHVA 1124
Query: 217 DLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQ 274
LS G+ V+Q +K ++ ++ +E+ +Q +++A+D G VI+T + +T +
Sbjct: 1125 LLSSDVQGTHVIQNIIKCFEESKRQFVFDEIY--EQFIELATDYSGLSVIKTIISKTHKP 1182
Query: 275 DRLSVHQRLVTKLQQHLAALRVMKYGS 301
+ +RL+ KL + L YG+
Sbjct: 1183 EN---RKRLMGKLVANAIELAQNPYGN 1206
>gi|391327709|ref|XP_003738339.1| PREDICTED: pumilio homolog 1-like [Metaseiulus occidentalis]
Length = 374
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 30/310 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+++Q KL S +F + + + LM+ ++G +V K + +E Q +
Sbjct: 45 QQGSRFIQHKLESATPSEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSEEQKLALAG 104
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+T + ++ +G ++K + V+ + ++ L+ + G+ V+
Sbjct: 105 KMTGH---IVNLTMHIYGCRVMQKAL--VSLPTEVRKKLIDELRNHVVQCANDENGNHVM 159
Query: 121 LKC---LEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
KC +EP Y FI + L H C + ++ K + IL I
Sbjct: 160 QKCFETIEPGYLQ---FIVDECIGKVRQLCSHSYACRVIQRLLEYCKFEQSIPILQEIHA 216
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
N L++ + GNYV+Q++L P AI A+RG+ V LS K S V++K + + ++
Sbjct: 217 NTLELAQDQYGNYVIQYILQHGLPKDKSAIIQAIRGNVVALSCHKYASNVMEKCVTHGSS 276
Query: 238 VHYIV---EELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+ V E D I ++ D + NYV+ QR+V H + L
Sbjct: 277 LERTVLMEEVCATKDGIFKMMKDPFANYVV----------------QRMVEVADAHYSKL 320
Query: 295 RVMKYGSNKE 304
V K NKE
Sbjct: 321 LVQKIALNKE 330
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 15/199 (7%)
Query: 112 MTKPGSSVILKCLEPSY------NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKG 165
MT P SV K E N D + H + A +QG + + +++
Sbjct: 1 MTSPKVSVTKKKNETKLIKEFKSNRYPDLELRDLCGHVIEFAQDQQGSRFIQHKLESATP 60
Query: 166 SRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGS 225
S ++ I + I SL H GNYVVQ + + A+ + GH V+L++ G
Sbjct: 61 SEKQMIFNEIFTWVYSLMTHEFGNYVVQKLFDFGSEEQKLALAGKMTGHIVNLTMHIYGC 120
Query: 226 FVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLS-VHQR 282
V+QK L +++EL N ++Q A+D+ GN+V+Q ET+ L +
Sbjct: 121 RVMQKALVSLPTEVRKKLIDELRN--HVVQCANDENGNHVMQKCF-ETIEPGYLQFIVDE 177
Query: 283 LVTKLQQ---HLAALRVMK 298
+ K++Q H A RV++
Sbjct: 178 CIGKVRQLCSHSYACRVIQ 196
>gi|195396057|ref|XP_002056649.1| GJ10105 [Drosophila virilis]
gi|194143358|gb|EDW59761.1| GJ10105 [Drosophila virilis]
Length = 812
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 149/308 (48%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 398 QHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 457
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 458 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 512
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + + IL + +
Sbjct: 513 QKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTQPILDELHEHTE 572
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 573 NLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 628
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 629 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 684
Query: 293 ALRVMKYG 300
ALR YG
Sbjct: 685 ALRKYTYG 692
>gi|431891161|gb|ELK02038.1| Pumilio like protein 1 [Pteropus alecto]
Length = 1349
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 32/316 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 892 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 949
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 950 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 999
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 1000 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1059
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1060 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1119
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1120 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1174
Query: 286 KLQQHLAALRVMKYGS 301
K++ H+A LR YG+
Sbjct: 1175 KIRPHIATLRKYTYGT 1190
>gi|321475178|gb|EFX86141.1| hypothetical protein DAPPUDRAFT_308458 [Daphnia pulex]
Length = 581
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 145/315 (46%), Gaps = 31/315 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + T+ LM+ +G +V KF E + Q + +
Sbjct: 253 QHGSRFIQQKLERATPAEKQMVFTEIIVGTYALMTDVFGNYVIQKFFEFGSPEQKSTLAQ 312
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
KI + + LA + +G ++K ++ V L HV+ +K +
Sbjct: 313 KI--RGHVLPLA-LQMYGCRVIQKALESVPSDQQKEIVRELDGHVLKCVK--------DQ 361
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E + FI A L L+ H GC + +++ + +L+
Sbjct: 362 NGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHCTPEQTSPVLNE 421
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ N +L + + GNYV+QHVL P I A++G + LS K S VV+K + +
Sbjct: 422 LHHNTETLIQDQYGNYVIQHVLEHGKPEDKLRIVTAVKGKVLSLSQHKFASNVVEKCVSH 481
Query: 235 --QNAVHYIVEELLN------SDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
++ +++E+++ + + D+Y NYV+Q + V Q +L +H
Sbjct: 482 ATRSERASLIDEVISFNDASPHSPLHTMMKDQYANYVVQKMIDVAEPSQRKLLMH----- 536
Query: 286 KLQQHLAALRVMKYG 300
K++ H++ LR YG
Sbjct: 537 KIRPHVSTLRKYTYG 551
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 10/190 (5%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + Q H L LA GC + ++++ ++K+I+ +
Sbjct: 291 GNYVIQKFFEFGSPEQKSTLAQKIRGHVLPLALQMYGCRVIQKALESVPSDQQKEIVREL 350
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + ++GN+VVQ + DP + I A G + LS G V+Q+ L++
Sbjct: 351 DGHVLKCVKDQNGNHVVQKCIECVDPMQLQFIIDAFEGQVLSLSTHPYGCRVIQRILEHC 410
Query: 235 -QNAVHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
++ EL N++ ++Q D+YGNYVIQ L +D+L R+VT ++ +
Sbjct: 411 TPEQTSPVLNELHHNTETLIQ---DQYGNYVIQHVLEHGKPEDKL----RIVTAVKGKVL 463
Query: 293 ALRVMKYGSN 302
+L K+ SN
Sbjct: 464 SLSQHKFASN 473
>gi|443896502|dbj|GAC73846.1| translational repressor Pumilio/PUF3 [Pseudozyma antarctica T-34]
Length = 944
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/322 (23%), Positives = 142/322 (44%), Gaps = 42/322 (13%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++QEKL S + LF V +LM+ +G +V K +E ++ Q A++
Sbjct: 604 QHGSRFIQEKLDSASAEEKKTLFDEVLPHARQLMTDVFGNYVIQKMLEHGDDEQRAVLAR 663
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQ------SPPLLYHVMSALKRLFKFLMMTK 114
++ + L S+ +G V+K +A + L H+M ++ +
Sbjct: 664 EM---EGNVLSLSLGTYGCRVVQKAFDYIAPEQREKLAKELDGHIMQCVR--------DQ 712
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ V+ K +E + FI +A + H LA H C L ++ ++ + +L
Sbjct: 713 NANHVVQKVIERVDAGEVAFIPEAFVGHVAGLASHCYSCRVLQRAFEHCTEAQARPLLDE 772
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ A +L +H+ GNYV+Q VL P + +RG+ + LS K S V+++ ++
Sbjct: 773 LHHEAYALMQHQYGNYVIQWVLQRGQPNDRAQVIAKIRGNVLTLSRHKFASNVIEEVIRT 832
Query: 235 QNA--VHYIVEELLNSDQI-------------------LQVASDKYGNYVIQTALVETMR 273
+A + +V+E+L Q+ + + D++ NYV+Q L +
Sbjct: 833 SSAADLDALVDEILTPKQVPSAGADAEAAQQTTKIAPAVLMMKDQFANYVLQRFLEKADG 892
Query: 274 QDRLSVHQRLVTKLQQHLAALR 295
R RLV +Q L + R
Sbjct: 893 AQR----ARLVEAVQPSLLSAR 910
>gi|260949221|ref|XP_002618907.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
gi|238846479|gb|EEQ35943.1| hypothetical protein CLUG_00066 [Clavispora lusitaniae ATCC 42720]
Length = 752
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 157/295 (53%), Gaps = 31/295 (10%)
Query: 1 EEGSQYLQEKL-----SSGDSR--ILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES 53
+ G ++LQ+++ S+ +R + +F V +EL+ +G ++ K I+ C+E+
Sbjct: 143 QHGCRFLQKRIDENVVSNSQTREANFEVIFEQVHPILYELIIDPFGNYLIQKLIDYCDET 202
Query: 54 QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT 113
L LI+ + F LF + S+++ G+ +++K+I ++ S L ++ LK L+
Sbjct: 203 NLNLILETLQFN--LFSI-SINQHGTRALQKVIDRMS-SDYQLSLLIKGLKPYIIELIKD 258
Query: 114 KPGSSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI- 171
G+ VI K L Y+ +N FIY + ++ L +A H+ GC L ++++ S+ Q
Sbjct: 259 LNGNHVIQKILN-KYSPENCQFIYDSIIQDLLVVATHKHGCCVLQKCLNHVNPSQLMQFS 317
Query: 172 LHLISVNA-ASLSRHRSGNYVVQHVLNLEDPFLIDAICFA--LRGHYVDLSLTKCGSFVV 228
+++ N L + GNYV+Q+++++ D I+ ++ +R DL +K S VV
Sbjct: 318 TNILKYNVFMKLVNDQFGNYVLQYLISI-DSIDINGQLYSNFVRFGVSDLCKSKFSSNVV 376
Query: 229 QKFLK-----------YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETM 272
+K ++ + N +V ++L+SD + ++ +D YGNYVIQT L++T+
Sbjct: 377 EKLMRNCFNNEFKSVEFSNLKFSLVSQILSSD-LNKLINDPYGNYVIQT-LIDTL 429
>gi|350538385|ref|NP_001233239.1| Pumilio2 [Xenopus laevis]
gi|313661062|dbj|BAJ41096.1| Pumilio2 [Xenopus laevis]
Length = 1173
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 71/316 (22%), Positives = 141/316 (44%), Gaps = 30/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 847 QHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALAT 906
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLY----HVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ Q ++ HV+ +K +
Sbjct: 907 RI--RGHVLPLA-LQMYGCRVIQKALESISTDQQSEMVRELDGHVLKCVK--------DQ 955
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI +A L+ H GC + +++ + IL
Sbjct: 956 NGNHVVQKCIECVTPQSLHFIIEAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEE 1015
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL I +RG + LS K S VV+K + +
Sbjct: 1016 LHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCVTH 1075
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ ++++E+ + + + D+Y NYV+Q + + Q ++ +H K
Sbjct: 1076 SSRTERAFLIDEICCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMH-----K 1130
Query: 287 LQQHLAALRVMKYGSN 302
++ H+ LR YG +
Sbjct: 1131 IRPHITTLRKYTYGKH 1146
Score = 37.4 bits (85), Expect = 7.9, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 98/241 (40%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S + ++ + G + + Q G V K IE L II
Sbjct: 921 GCRVIQKALESISTDQQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVTPQSLHFIIE-- 978
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+++L S +G ++++++ Q+ P+L + + ++L + + G+ VI
Sbjct: 979 AFKGQVYVL-STHPYGCRVIQRILEHCTPEQTLPILEELHQSTEQLVQ----DQYGNYVI 1033
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN-- 178
LE + I L L+ H+ + + + + R ++ I
Sbjct: 1034 QHVLEHGRSDDKSKIVCEVRGQVLVLSQHKFASNVVEKCVTHSSRTERAFLIDEICCQND 1093
Query: 179 -----AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 1094 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 1153
Query: 234 Y 234
Y
Sbjct: 1154 Y 1154
>gi|219116400|ref|XP_002178995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409762|gb|EEC49693.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 319
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L GD+ + V L + +G +V K ++ + + I
Sbjct: 15 QNGSRFIQQRLELGDTSEQQIVMSEVLPAIRRLRNDVFGNYVIQKLLDFGSADMKSEI-- 72
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS--PPLL----YHVMSALKRLFKFLMMTK 114
+ T + ++ L S+ +G V+K ++ + + P LL ++V+S + +
Sbjct: 73 RNTLESEMLQL-SLQMYGCRVVQKALEALPEEELPRLLMEFHHNVLSCIH--------DQ 123
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ VI KC+E + +FI L + L+CH GC L +++ + +++ +L
Sbjct: 124 NENHVIQKCVE-FLTEQIEFIINDVLVNTKTLSCHPYGCRVLQRILEHCEKTKKTAVLDE 182
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAIC-FALRGHYVDLSLTKCGSFVVQKFLK 233
I L + GNYV+QHVL D+I + + LS K S VV+K LK
Sbjct: 183 ICKAHRKLLDDQYGNYVIQHVLQFGRQSDRDSILHIVVENGLLGLSRQKFASNVVEKLLK 242
Query: 234 YQNAVHY--IVEELLNSDQILQVASDKYGNYVIQTAL 268
Y N IV E+L IL + D Y NYV+QT L
Sbjct: 243 YGNGSQRRAIVREMLKV--ILLMVRDAYANYVVQTTL 277
>gi|356542345|ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1053
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 22/308 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + ++ + LM+ +G +V KF E SQ + K+
Sbjct: 731 GSRFIQQKLETATTEEKNMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKL 790
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
L S+ +G ++K I+VV L + ++ L +M + G+ V
Sbjct: 791 LGH---VLTLSLQMYGCRVIQKAIEVVD-----LDQKIEMVQELDGNVMRCVRDQNGNHV 842
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISVN 178
I KC+E FI + + L+ H GC + +++ K +Q ++ I
Sbjct: 843 IQKCIECVPEDAIHFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPTTQQKVMDEILGA 902
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ L++ + GNYVVQHVL P +I L V +S K S VV+K L +
Sbjct: 903 VSMLAQDQYGNYVVQHVLEHGKPHERSSIIKELADKIVQMSQQKFASNVVEKCLTFGGPS 962
Query: 239 HY--IVEELLNS---DQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+V ++L + ++ LQ + D++ NYV+Q L Q R + ++++++ HL
Sbjct: 963 ERQLLVSQMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQR----ELILSRIKVHLN 1018
Query: 293 ALRVMKYG 300
AL+ YG
Sbjct: 1019 ALKKYTYG 1026
>gi|384494635|gb|EIE85126.1| hypothetical protein RO3G_09836 [Rhizopus delemar RA 99-880]
Length = 680
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 143/310 (46%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + +LM+ +G +V KF E N+ Q A++
Sbjct: 343 QHGSRFIQQKLETASREEKEMVFEEILPNALQLMTDVFGNYVLQKFFEHGNQLQKAVLAR 402
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ + S+ +G ++K ++ V L ++ L +++ + G+
Sbjct: 403 QMEGH---VMSLSLQMYGCRVIQKALEYV-----LTEQQACLIRELDGYVLKCVKDQNGN 454
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A +L+ H GC + ++ G ++ +L +
Sbjct: 455 HVIQKAIERVPAQHIRFIIDAFKGQVYHLSTHPYGCRVIQRVLEYCTGEQKNPLLKELDD 514
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL----- 232
SL + + GNYV+QH+L +P I + G + S K S VV+K +
Sbjct: 515 FIESLIKDQYGNYVIQHILERGEPRDKANIIKKISGRVLSFSKHKFASNVVEKCVDNGSK 574
Query: 233 -KYQNAVHYIVEELLNSD-QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ Q+ + +V+ + + ++ + D+Y NYV+Q ++E +D+ + +L+ + H
Sbjct: 575 EQRQDFIDEVVKCPTDGECPLVLMMKDQYANYVVQ-RMLEVATEDQRN---KLIETTRPH 630
Query: 291 LAALRVMKYG 300
LA L+ YG
Sbjct: 631 LALLKKYPYG 640
>gi|302853691|ref|XP_002958359.1| pumilio family protein [Volvox carteri f. nagariensis]
gi|300256312|gb|EFJ40581.1| pumilio family protein [Volvox carteri f. nagariensis]
Length = 345
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 140/324 (43%), Gaps = 37/324 (11%)
Query: 1 EEGSQYLQEKLSSG------DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQ 54
+ GS+++Q+ G ++ +D F V LM+ +G +V KF+E
Sbjct: 30 QHGSRFIQQARGGGLKLECVNNEDVDAAFGEVVPRILHLMTDVFGNYVVQKFLEHGTPQH 89
Query: 55 LALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFK 108
A I + L S+ +G V+K ++V + L HVM ++
Sbjct: 90 RACISKALHGH---VLQLSLQMYGCRVVQKALEVFTEDQQVDLVSELDGHVMRCVR---- 142
Query: 109 FLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRR 168
+ G+ VI KC+E H+ + L + L+ H GC + +++++ RR
Sbjct: 143 ----DQNGNHVIQKCIECVPTHRIAGLLDNFLMCVVPLSTHPFGCRIIQRILEHVRDQRR 198
Query: 169 KQ-ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
+ ++ I A L++ + GNYV+QHVL P +I +L V LS+ K S V
Sbjct: 199 RAAVMADILGAAVQLTQDQYGNYVIQHVLERGTPEEKSSIIGSLSATVVQLSMHKFASNV 258
Query: 228 VQKFLKYQNAV--HYIVEELLNSDQI-------LQVASDKYGNYVIQTALVETMRQDRLS 278
++K L + + I+ +L I + D++GNYV+Q L R
Sbjct: 259 IEKCLIHGSTADRDLIINRMLGPLNISPKRGPWTAMIKDQFGNYVVQKVLEVCTDVQR-- 316
Query: 279 VHQRLVTKLQQHLAALRVMKYGSN 302
+ ++ +++ L AL+ YG +
Sbjct: 317 --EAMLARVRAQLHALKRFTYGKH 338
>gi|426221803|ref|XP_004005096.1| PREDICTED: pumilio homolog 1 isoform 1 [Ovis aries]
Length = 1180
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 854 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 911
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 912 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 961
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 962 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1021
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1022 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1081
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1082 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1136
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1137 KIRPHIATLRKYTYGKH 1153
>gi|73950060|ref|XP_865319.1| PREDICTED: pumilio homolog 1 isoform 14 [Canis lupus familiaris]
Length = 1186
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|410966646|ref|XP_003989841.1| PREDICTED: pumilio homolog 1 isoform 1 [Felis catus]
Length = 1186
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|300797595|ref|NP_001180052.1| pumilio homolog 1 [Bos taurus]
gi|296490233|tpg|DAA32346.1| TPA: pumilio homolog 1 [Bos taurus]
Length = 1186
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|396082534|gb|AFN84143.1| Puf RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 529
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 127/275 (46%), Gaps = 23/275 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q K+ + + F ++ EL + +G +V K I E + +
Sbjct: 228 QEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGNYVIQKIIPLVTEEERTRLTT 287
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q L SV +G ++KL+ V P + ++ +K L+ + G+ VI
Sbjct: 288 SLVGQIHLL---SVHPYGCRVIQKLVDV----SPDVDFILEEVKGNLLELIEDQNGNHVI 340
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + + I Q ++ L+LA H+ GC + ++ K K I+ ++ N
Sbjct: 341 QKCIEKCKDRR--IILQQFSKNSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEILINNIK 398
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + GNYV+QH+L + E +I+ I + Y +LS K S VV++ +K N
Sbjct: 399 TLVDDQYGNYVIQHILTVGKEKEKNLVIEKI---IEKSY-ELSKCKFSSNVVEQCVKLSN 454
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQ 265
+ +E + + + + D YGNYV+Q
Sbjct: 455 NGQRERFLEKFLEPVGSKPGMYSMCIDMYGNYVVQ 489
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 130 HKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGN 189
+KN F + E C+ ++ ++G + +DN+ + I+ AA LS + GN
Sbjct: 208 YKNVFGGTSMKEICISISKDQEGSRCIQRKMDNISKEEISWFFNNIADAAAELSANLFGN 267
Query: 190 YVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSD 249
YV+Q ++ L + +L G LS+ G V+QK + V +I+EE+ +
Sbjct: 268 YVIQKIIPLVTEEERTRLTTSLVGQIHLLSVHPYGCRVIQKLVDVSPDVDFILEEVKGN- 326
Query: 250 QILQVASDKYGNYVIQTALVETMRQDRLSVHQ 281
+L++ D+ GN+VIQ +E + R+ + Q
Sbjct: 327 -LLELIEDQNGNHVIQKC-IEKCKDRRIILQQ 356
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + +D IL + N L ++GN+V+Q + I
Sbjct: 296 LSVHPYGCRVIQKLVD--VSPDVDFILEEVKGNLLELIEDQNGNHVIQKCIEKCKDRRII 353
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYV 263
F+ + L+ K G V+Q+ L++ + + IVE L+N+ I + D+YGNYV
Sbjct: 354 LQQFSKNSLF--LATHKYGCRVIQRMLEFCKEEEIKDIVEILINN--IKTLVDDQYGNYV 409
Query: 264 IQTALVETMRQDRLSVHQRLVTK 286
IQ L +++ V ++++ K
Sbjct: 410 IQHILTVGKEKEKNLVIEKIIEK 432
>gi|320166165|gb|EFW43064.1| pumilio [Capsaspora owczarzaki ATCC 30864]
Length = 1003
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/312 (23%), Positives = 138/312 (44%), Gaps = 20/312 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q++L + R + +F + LM+ +G +V K E + +
Sbjct: 546 QHGSRCIQQRLETATEREKNLVFDEILPHALHLMTDVFGNYVIQKLFEHGTAAHRLELAR 605
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + L S+ +G ++K ++ + + P ++ L+ + + G+ V+
Sbjct: 606 RL---EGHILRLSLQMYGCRVIQKAVESIPE--PQQVALVRELEGSVIMCVKDQNGNHVV 660
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ + L+ H GC + +++ ++ +L + N +
Sbjct: 661 QKCIEQVPAMHLQFVVDSFRGLVPSLSTHPYGCRVIQRILEHCTPTQVMSMLQEVLGNCS 720
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICF-ALRGHYVDLSLTKCGSFVVQKFLKYQ---N 236
L + + GNYV+QHVL P AI A+RG V LS K S VV+K + +
Sbjct: 721 RLIQDQYGNYVIQHVLE-HGPQEAKAIVLDAMRGRIVPLSQHKFASNVVEKCIVHSADLE 779
Query: 237 AVHYIVEELLNSD------QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
V I E L+ SD +L + D + NYV+Q L R +L+ +++ +
Sbjct: 780 RVALINEILVQSDPGSPTSALLAMMRDPFANYVVQKMLDVACEDQR----NQLIARIRPN 835
Query: 291 LAALRVMKYGSN 302
+ +LR YG +
Sbjct: 836 ILSLRKYTYGKH 847
>gi|338721822|ref|XP_001916930.2| PREDICTED: pumilio homolog 1 [Equus caballus]
Length = 1163
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 837 QHGSRFIQLKLERATPTERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 894
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 895 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK--------D 944
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 945 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1004
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1005 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1064
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1065 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1119
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1120 KIRPHIATLRKYTYGKH 1136
>gi|345317188|ref|XP_001506884.2| PREDICTED: pumilio homolog 2-like [Ornithorhynchus anatinus]
Length = 429
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 133/311 (42%), Gaps = 20/311 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 103 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 162
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 163 RIRGH---VLPLALQMYGCRVIQKALESI--SPDQQNEMVKELDGHVLKCVKDQNGNHVV 217
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 218 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 277
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 278 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 337
Query: 240 --YIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
I E SD + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 338 ALLIDEVCCQSDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 391
Query: 292 AALRVMKYGSN 302
+ LR YG +
Sbjct: 392 STLRKYTYGKH 402
>gi|344245037|gb|EGW01141.1| Pumilio-like 1 [Cricetulus griseus]
Length = 364
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 36 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLAL-- 93
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 94 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 151
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 152 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 211
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 212 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 271
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 272 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 326
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 327 ATLRKYTYGKH 337
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 110 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 168
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L L + + L+ + G+
Sbjct: 169 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPIL----EELHQHTEQLVQDQYGNY 222
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 223 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 282
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 283 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 342
Query: 232 LKY 234
KY
Sbjct: 343 EKY 345
>gi|344287508|ref|XP_003415495.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Loxodonta
africana]
Length = 1185
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 859 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 916
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 917 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPADQQNEMVRELDGHVLKCVK--------D 966
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 967 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1026
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1027 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1086
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1087 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 1141
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1142 KIRPHIATLRKYTYGKH 1158
>gi|197102622|ref|NP_001127595.1| pumilio homolog 1 [Pongo abelii]
gi|75041171|sp|Q5R5X3.1|PUM1_PONAB RecName: Full=Pumilio homolog 1
gi|55732279|emb|CAH92843.1| hypothetical protein [Pongo abelii]
Length = 1186
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|403293276|ref|XP_003937646.1| PREDICTED: pumilio homolog 1 isoform 4 [Saimiri boliviensis
boliviensis]
Length = 1127
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 801 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 858
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 859 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 908
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 909 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 968
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 969 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1028
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1029 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1083
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1084 KIRPHIATLRKYTYGKH 1100
>gi|403293270|ref|XP_003937643.1| PREDICTED: pumilio homolog 1 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 1186
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|297282790|ref|XP_002802328.1| PREDICTED: pumilio homolog 1 [Macaca mulatta]
gi|332808253|ref|XP_003307983.1| PREDICTED: pumilio homolog 1 [Pan troglodytes]
gi|397515867|ref|XP_003828163.1| PREDICTED: pumilio homolog 1 isoform 4 [Pan paniscus]
gi|402853683|ref|XP_003891520.1| PREDICTED: pumilio homolog 1 isoform 3 [Papio anubis]
Length = 1127
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 801 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 858
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 859 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 908
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 909 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 968
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 969 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1028
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1029 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1083
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1084 KIRPHIATLRKYTYGKH 1100
>gi|390465605|ref|XP_002750597.2| PREDICTED: pumilio homolog 1 isoform 1 [Callithrix jacchus]
Length = 1129
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 803 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 860
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 861 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 910
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 911 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 970
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 971 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1030
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1031 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1085
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1086 KIRPHIATLRKYTYGKH 1102
>gi|194377510|dbj|BAG57703.1| unnamed protein product [Homo sapiens]
Length = 1127
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 801 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 858
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 859 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 908
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 909 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 968
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 969 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1028
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1029 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1083
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1084 KIRPHIATLRKYTYGKH 1100
>gi|13491166|ref|NP_055491.1| pumilio homolog 1 isoform 2 [Homo sapiens]
gi|332808248|ref|XP_001157169.2| PREDICTED: pumilio homolog 1 isoform 3 [Pan troglodytes]
gi|397515861|ref|XP_003828160.1| PREDICTED: pumilio homolog 1 isoform 1 [Pan paniscus]
gi|402853679|ref|XP_003891518.1| PREDICTED: pumilio homolog 1 isoform 1 [Papio anubis]
gi|41688619|sp|Q14671.3|PUM1_HUMAN RecName: Full=Pumilio homolog 1; Short=HsPUM; Short=Pumilio-1
gi|11139706|gb|AAG31807.1|AF315592_1 Pumilio 1 [Homo sapiens]
gi|15426559|gb|AAH13398.1| Pumilio homolog 1 (Drosophila) [Homo sapiens]
gi|119628038|gb|EAX07633.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|119628039|gb|EAX07634.1| pumilio homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158256990|dbj|BAF84468.1| unnamed protein product [Homo sapiens]
gi|325463587|gb|ADZ15564.1| pumilio homolog 1 (Drosophila) [synthetic construct]
gi|380784597|gb|AFE64174.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|383410801|gb|AFH28614.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|384943766|gb|AFI35488.1| pumilio homolog 1 isoform 2 [Macaca mulatta]
gi|410225216|gb|JAA09827.1| pumilio homolog 1 [Pan troglodytes]
gi|410266288|gb|JAA21110.1| pumilio homolog 1 [Pan troglodytes]
gi|410304036|gb|JAA30618.1| pumilio homolog 1 [Pan troglodytes]
gi|410350699|gb|JAA41953.1| pumilio homolog 1 [Pan troglodytes]
Length = 1186
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 76/317 (23%), Positives = 138/317 (43%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 860 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 917
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 918 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 967
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 968 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1027
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1028 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1087
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1088 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1142
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1143 KIRPHIATLRKYTYGKH 1159
>gi|285026237|dbj|BAI68041.1| Pumilio2 [Danio rerio]
Length = 1206
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 73/335 (21%), Positives = 142/335 (42%), Gaps = 42/335 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +F + ++LM+ +G +V KF E + Q +
Sbjct: 854 QHGSRFIQQKLERATSAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 913
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 914 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVV 970
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI----- 175
KC+E FI A L+ H GC + +++ + IL +
Sbjct: 971 QKCIECVQPQAFQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHFE 1030
Query: 176 -------------------SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+V++ +L + + GNYV+QHVL P I +RG +
Sbjct: 1031 QLGQKYQGVSLEMTPQTYYTVSSDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVL 1090
Query: 217 DLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALV 269
LS K S VV+K + + + +++E+ + + D+Y NYV+Q +
Sbjct: 1091 ALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI- 1149
Query: 270 ETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
D QR ++ K++ H+A LR YG +
Sbjct: 1150 -----DMAEPAQRKIIMHKIRPHIATLRKYTYGKH 1179
>gi|384502000|gb|EIE92491.1| hypothetical protein RO3G_17013 [Rhizopus delemar RA 99-880]
Length = 259
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 96/194 (49%), Gaps = 5/194 (2%)
Query: 38 YGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLY 97
+G + K ++ C + Q I+ IT A+++ G+ +V++LI+ ++ +P +
Sbjct: 8 FGNYFCQKLLDKCTDEQRTRIV-HIT--SPHLAQAALNIHGTRAVQRLIETIS-TPEQID 63
Query: 98 HVMSALKRLFKFLMMTKPGSSVILKCLEP-SYNHKNDFIYQAALEHCLYLACHEQGCINL 156
V+ AL L+ G+ VI KCL S KN FIY A +C+ +A H+ GC L
Sbjct: 64 SVIHALNPSVTALIKNLNGNHVIQKCLHYLSKEEKNQFIYDAICTNCVEVASHKHGCCVL 123
Query: 157 NNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
D ++ Q++ IS +A L + GNYVVQ+VL+L + I GH
Sbjct: 124 QRCFDYATFKQKDQLVKEISKHALVLVQGPFGNYVVQYVLDLGLVTYSENINQKFLGHIC 183
Query: 217 DLSLTKCGSFVVQK 230
LS K S V++K
Sbjct: 184 SLSSQKFSSNVIEK 197
>gi|168278511|dbj|BAG11135.1| pumilio homolog 1 [synthetic construct]
Length = 1162
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++L +G +V KF E + E +LAL
Sbjct: 834 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLEQKLAL-- 891
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 892 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 949
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 950 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1009
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1010 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1069
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1070 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1124
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1125 ATLRKYTYGKH 1135
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 908 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 966
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 967 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1020
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1021 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1080
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1081 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1140
Query: 232 LKY 234
KY
Sbjct: 1141 EKY 1143
>gi|58257646|dbj|BAA07895.3| KIAA0099 protein [Homo sapiens]
Length = 1175
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 18/311 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++L +G +V KF E + E +LAL
Sbjct: 847 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLNVDVFGNYVIQKFFEFGSLEQKLAL-- 904
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 905 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 962
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 963 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 1022
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1023 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1082
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1083 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1137
Query: 292 AALRVMKYGSN 302
A LR YG +
Sbjct: 1138 ATLRKYTYGKH 1148
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 48/243 (19%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 921 GCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 979
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L + ++L + + G+
Sbjct: 980 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPILEELHQHTEQLVQ----DQYGNY 1033
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 1034 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 1093
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 1094 NDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMHKIRPHIATLRKYTYGKHILAKL 1153
Query: 232 LKY 234
KY
Sbjct: 1154 EKY 1156
>gi|162312380|ref|NP_593141.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe
972h-]
gi|229891786|sp|O94462.4|PUF3_SCHPO RecName: Full=mRNA-binding protein puf3; AltName: Full=Pumilio
homology domain family member 3
gi|159883910|emb|CAA22616.2| RNA-binding protein Puf3 (predicted) [Schizosaccharomyces pombe]
Length = 732
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFW-VVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL++ + +F + S +LM +G +V K+ E NE Q +++
Sbjct: 408 QHGSRFIQQKLATATEEEREAVFQEIASTSCLQLMMDIFGNYVVQKYFEFGNEKQKQILL 467
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+I + +F L S+ +G V+K I+ + SP ++ L + + G+ V
Sbjct: 468 SQI--KGHVFSL-SLQMYGCRVVQKAIEYI--SPEHQVQLIQELDGHVLDCVCDQNGNHV 522
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I K +E FI +A L+ H GC + I++ S RK I+ + +
Sbjct: 523 IQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQRAIEHCH-SERKLIIEELLPHI 581
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L++ + GNYVVQH+L I + H + LS K S VV++ + Y + V
Sbjct: 582 LKLTQDQYGNYVVQHILRTGSESDKKYIFDLMIDHLLFLSCHKFASNVVERCISYISDVD 641
Query: 240 -------YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
I E+ N ++ + DKY NYVIQ L + ++R L++ + H++
Sbjct: 642 RRRILNKIISEKAENCSILMLMMKDKYANYVIQKLLDASPEEER----DLLISYIYPHIS 697
Query: 293 ALRVMKYG 300
L+ YG
Sbjct: 698 VLKKFTYG 705
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 7/194 (3%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LMM G+ V+ K E + + H L+ GC + I+ + +
Sbjct: 441 LMMDIFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQV 500
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
Q++ + + ++GN+V+Q + D + I ALR LS G V+Q
Sbjct: 501 QLIQELDGHVLDCVCDQNGNHVIQKAIECIDTGHLQFILRALRPQIHVLSAHPYGCRVIQ 560
Query: 230 KFLKY-QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ +++ + I+EELL IL++ D+YGNYV+Q L D+ + ++
Sbjct: 561 RAIEHCHSERKLIIEELL--PHILKLTQDQYGNYVVQHILRTGSESDKKYIFDLMI---- 614
Query: 289 QHLAALRVMKYGSN 302
HL L K+ SN
Sbjct: 615 DHLLFLSCHKFASN 628
>gi|222624342|gb|EEE58474.1| hypothetical protein OsJ_09731 [Oryza sativa Japonica Group]
Length = 599
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 11/212 (5%)
Query: 91 QSPPLL-YHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACH 149
+SP +L Y M K F+ + G + + E + + D I++ ++H L +
Sbjct: 379 ESPRMLRYENMVGAKGYIYFMAKDQNGCRFLQQKFEEGKD-QADLIFEGIIDHIPELMAN 437
Query: 150 EQGCINLNNFIDNMKGSRRKQILHLISVNAASLSR---HRSGNYVVQHVLNLEDPFLIDA 206
+ +D +R +I+ +++ + L R + GNYV+Q+VL+L+ PF
Sbjct: 438 SFANYLVQKLLDVCDEEQRLRIIAVLTEDPVKLLRVSLNSHGNYVIQYVLDLKIPFANAQ 497
Query: 207 ICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVI 264
+ +G+YV LS K GS VV+K LK + I+ EL+++ Q+ D Y NYVI
Sbjct: 498 LASLFQGNYVYLSKQKVGSNVVEKCLKVFPDDDKAAIIWELISASHFEQLLQDPYANYVI 557
Query: 265 QTALVETMRQDRLSVHQRLVTKLQQHLAALRV 296
TALV+T R + LV + H A+R
Sbjct: 558 HTALVQT----RGHLRSALVNAILPHEEAIRT 585
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ+K G + D +F + ELM+ + ++ K ++ C+E Q II
Sbjct: 403 QNGCRFLQQKFEEGKDQA-DLIFEGIIDHIPELMANSFANYLVQKLLDVCDEEQRLRIIA 461
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+T L S++ G+ ++ ++ + + P + S + + +L K GS+V+
Sbjct: 462 VLTEDPVKLLRVSLNSHGNYVIQYVLDL--KIPFANAQLASLFQGNYVYLSKQKVGSNVV 519
Query: 121 LKCLE 125
KCL+
Sbjct: 520 EKCLK 524
>gi|322702154|gb|EFY93902.1| hypothetical protein MAC_00393 [Metarhizium acridum CQMa 102]
Length = 829
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 152/319 (47%), Gaps = 30/319 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 445 QHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQVQKKVLAE 504
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ + + S+ + V+K ++ +V Q L + + R+ + + G+
Sbjct: 505 KMKGK---VVDLSMQVYACRVVQKALEHVLVEQQAELTKELEPDILRVIR----DQNGNH 557
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DFI A LA H GC + +++ S + +I+ + +
Sbjct: 558 VVQKIIELVPRQCIDFIMNAVRGQVTALASHTYGCRVIQRMLEHGTESDKMEIMTELHAS 617
Query: 179 AASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
A L + GNYV QHV+ P +ID + L + LS K S VV+K +++
Sbjct: 618 AQILITDQYGNYVAQHVIQNGKPEDRARMIDLVMAQL----LTLSKHKFASNVVEKCIEH 673
Query: 235 QNAVHY--IVEEL--LNSD---QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
A I E+L + SD + Q+ D+YGNYVIQ L + ++R LV ++
Sbjct: 674 GTAEQRTSIREQLTTVGSDGTSPLQQMMRDQYGNYVIQKLLGQLEGRER----HMLVEEI 729
Query: 288 QQHLAALRVMKYGSNKEIQ 306
+ AL+ K G+++++Q
Sbjct: 730 KPQFFALK--KNGTSRQLQ 746
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ + Q+ I NA L + GNYVVQ +
Sbjct: 437 HVVEFSGDQHGSRFIQQKLESANSDEKDQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQ 496
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEEL------LNSDQILQVA 255
+ ++G VDLS+ VVQK L+ H +VE+ L D IL+V
Sbjct: 497 VQKKVLAEKMKGKVVDLSMQVYACRVVQKALE-----HVLVEQQAELTKELEPD-ILRVI 550
Query: 256 SDKYGNYVIQTALVETMRQ 274
D+ GN+V+Q + RQ
Sbjct: 551 RDQNGNHVVQKIIELVPRQ 569
>gi|406861814|gb|EKD14867.1| pumilio domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 948
Score = 72.4 bits (176), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 26/316 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q +L + +S ++LF + +LM+ +G +V K E N+ Q +L
Sbjct: 557 QHGSRFIQNRLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQVQKR--VL 614
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ V Q L + + + + K + G+
Sbjct: 615 AEQMKNHVLEL-SLQMYGCRVVQKALEHVLADQQAELAQELRADVLKCVK----DQNGNH 669
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI +A LA H GC + ++ K + IL +
Sbjct: 670 VVQKAIERVPTEHVRFIIEAFRGQVHTLAVHPYGCRVIQRILEYCKPHEQVGILEELHQC 729
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--- 235
A L + GNYV QHV+ P + + ++LS K S VV+K +++
Sbjct: 730 TAMLITDQYGNYVTQHVIEHGQPEDQAKVIRIVTSQLLELSKHKFASNVVEKCIEFGTHE 789
Query: 236 ------NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
N V+++ ++ Q++ D YGNYVIQ + + +R V ++
Sbjct: 790 QRRAIVNTVNHVHSNGISPLQLM--IKDPYGNYVIQRIIGQLNGAER----DGFVNAMKP 843
Query: 290 HLAALRVMKYGSNKEI 305
L L+ KY S K+I
Sbjct: 844 QLTQLK--KYTSGKQI 857
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
SV+L+ + + + H + + + G + N ++ ++Q+ I
Sbjct: 525 SVLLEEFRSNSKANKKYELRDIYNHVVEFSGDQHGSRFIQNRLETANSDEKEQLFREIQP 584
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
NA L GNYV+Q + + + ++ H ++LSL G VVQK L++ A
Sbjct: 585 NALQLMTDVFGNYVIQKLFEHGNQVQKRVLAEQMKNHVLELSLQMYGCRVVQKALEHVLA 644
Query: 238 VHYI-VEELLNSDQILQVASDKYGNYVIQTAL 268
+ + L +D +L+ D+ GN+V+Q A+
Sbjct: 645 DQQAELAQELRAD-VLKCVKDQNGNHVVQKAI 675
>gi|39644512|gb|AAH24218.2| PUM2 protein, partial [Homo sapiens]
Length = 489
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 134/309 (43%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 161 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 220
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 221 RIRGH---VLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVV 277
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 278 QKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE 337
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + + GNYV+QHVL P I +RG + LS K S VV+K + + +
Sbjct: 338 QLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAER 397
Query: 241 --IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + D QR ++ K++ H+
Sbjct: 398 ALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMHKIRPHI 451
Query: 292 AALRVMKYG 300
LR YG
Sbjct: 452 TTLRKYTYG 460
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 101/247 (40%), Gaps = 26/247 (10%)
Query: 3 GSQYLQEKLSS--GDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L S D +++ ++ + G + + Q G V K IE L II
Sbjct: 235 GCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 293
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F+L S +G ++++++ Q+ P+L L + + L+ + G+
Sbjct: 294 -DAFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPIL----EELHQHTEQLVQDQYGNY 347
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDN--MKGSRRKQILHLIS 176
VI LE I L L+ H+ +N ++ SR ++ L +
Sbjct: 348 VIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFA----SNVVEKCVTHASRAERALLIDE 403
Query: 177 VNAASLSRHRS---------GNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
V + H + NYVVQ ++++ +P I +R H L G +
Sbjct: 404 VCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHI 463
Query: 228 VQKFLKY 234
+ K KY
Sbjct: 464 LAKLEKY 470
>gi|296814620|ref|XP_002847647.1| APUM2 [Arthroderma otae CBS 113480]
gi|238840672|gb|EEQ30334.1| APUM2 [Arthroderma otae CBS 113480]
Length = 916
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 526 QHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLAQ 585
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ Q ++ L SV +G +V+K ++ V L+ + +K L +M + G+
Sbjct: 586 QM--QGHIYSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNGN 637
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E N FI A H GC + +++ + R IL I
Sbjct: 638 HVIQKAIERVPNEHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHA 697
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 698 CTPSLISDQYGNYVIQHIIEFGEEADKNKIISIVLGQAVHFSKHKFASNVVEKSITFG-- 755
Query: 238 VHYIVEELLNSDQILQVAS------------DKYGNYVIQTALVETMRQDRLSVHQRLVT 285
+E+ L +IL + D+YGNYVIQ +L D ++ LV+
Sbjct: 756 ---TLEQRLGITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGSD----YKMLVS 808
Query: 286 KLQQHLAALRVMKYG 300
++ + L+ YG
Sbjct: 809 RIMPLMPLLKKCSYG 823
>gi|167392700|ref|XP_001740261.1| pumilio [Entamoeba dispar SAW760]
gi|165895722|gb|EDR23351.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 525
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+ + G K++ + EL S + +V K +E ES+ ++ K+
Sbjct: 220 GSRTVQQSIEKGSEDERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESR-HIVPQKM 278
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
L ++ +G V+K ++ V+ L + L++ + + G+ VI K
Sbjct: 279 KGN---VLRLTLHMYGCRVVQKAVEYVSMKDRRL--LFEELRKSLVRCIEDQNGNHVIQK 333
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E I A L H GC + I+++ ++L +I ++ L
Sbjct: 334 CVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDL 393
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
+ + GNYVVQ+VL P I ++G+ V LS+ K S V++K K+ N
Sbjct: 394 TEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQ 453
Query: 241 IVEELLNSDQILQVASDKYGNYVIQ 265
I+EE+ ++ ILQ+ D++ NYV+Q
Sbjct: 454 ILEEIYQNNGILQMMQDQFANYVVQ 478
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K LE P H + Q + L L H GC + ++ + R+ + +
Sbjct: 259 VIQKALEFIPESRH---IVPQKMKGNVLRLTLHMYGCRVVQKAVEYVSMKDRRLLFEELR 315
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ ++GN+V+Q + D ++ I AL+G ++ G VVQ+ ++
Sbjct: 316 KSLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE--- 372
Query: 237 AVHY-IVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V Y V ELL L + D+YGNYV+Q L DR ++ Q +++ ++
Sbjct: 373 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQ----QIKGNIVR 428
Query: 294 LRVMKYGSN 302
L + KY SN
Sbjct: 429 LSMGKYSSN 437
>gi|357608364|gb|EHJ65955.1| putative pumilio [Danaus plexippus]
Length = 712
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 135/311 (43%), Gaps = 33/311 (10%)
Query: 6 YLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQ 65
++Q+KL + +F + G + LM+ +G +V KF E Q + K+
Sbjct: 394 FIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRGH 453
Query: 66 DQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLMMTKPG 116
L ++ +G ++K ++ + PP L HV+ +K + G
Sbjct: 454 ---VLALALQMYGCRVIQKALESI---PPEQQQEVVRELDGHVLKCVK--------DQNG 499
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ V+ KC+E FI A L+ H GC + +++ + +L +
Sbjct: 500 NHVVQKCIECVEPAALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTAEQTAPVLAELH 559
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ L + + GNYVVQHVL + +RG + LS K S VV+K + +
Sbjct: 560 AHTDQLIQDQYGNYVVQHVLEHGAAEDRSRLVAGVRGKVLQLSQHKFASNVVEKCVTHAT 619
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+N +++EL N + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 620 RNERALLIDELCGFNDNALHVMMKDQYANYVVQKMIDVAEPTQRKVLMH-----KIRPHI 674
Query: 292 AALRVMKYGSN 302
+LR YG +
Sbjct: 675 GSLRKYTYGKH 685
>gi|195055380|ref|XP_001994597.1| GH15257 [Drosophila grimshawi]
gi|193892360|gb|EDV91226.1| GH15257 [Drosophila grimshawi]
Length = 805
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 148/308 (48%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 399 QHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNNLGM 458
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 459 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPDQQQEIVHELDGHVLKCVKDQNGNHVV 513
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + IL + +
Sbjct: 514 QKCIECVDPVALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 573
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 574 NLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 629
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 630 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 685
Query: 293 ALRVMKYG 300
ALR YG
Sbjct: 686 ALRKYTYG 693
>gi|223995911|ref|XP_002287629.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976745|gb|EED95072.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 306
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 31/290 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L D+ + V EL + +G +V K E N+ A L
Sbjct: 13 QNGSRFIQQRLEVADAAEKRAVMSEVIPNMSELQNDVFGNYVVQKLFEFGNDEMKA--DL 70
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFK----FLMMTKPG 116
K + + L S+ +G ++K ++ L Y V+ L + FK + + G
Sbjct: 71 KGALTNNMISL-SLQMYGCRVIQKALE------SLDYEVLCELLKEFKQSVLMCIQDQNG 123
Query: 117 SSVILKCLEP-SYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ V+ KC+E S K +FI L + L CH GC L +++ ++ L
Sbjct: 124 NHVMQKCIEVMSIKAKEAEFIVDDVLANVETLCCHPYGCRVLQRMLEHCVEFQKTATLDE 183
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAIC-FALRGHYVDLSLTKCGSFVVQKFLK 233
I + +L + GNYV+QHVL D++ + + LS K S VV+K LK
Sbjct: 184 IQLVHKTLLDDQYGNYVIQHVLQYGRDSDRDSLLKIIVENDLLKLSRQKFASNVVEKLLK 243
Query: 234 YQNA--VHYIVEELL-------------NSDQILQVASDKYGNYVIQTAL 268
Y NA + IV E+L S +L + D Y NYV+QTA+
Sbjct: 244 YGNARQRNAIVREMLQVVNESGTSQEGVGSTVLLLMVRDAYANYVVQTAI 293
>gi|315053707|ref|XP_003176228.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
gi|311338074|gb|EFQ97276.1| pumilio domain-containing protein [Arthroderma gypseum CBS 118893]
Length = 914
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 141/310 (45%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 522 QHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLAQ 581
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G+
Sbjct: 582 QM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNGN 633
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E N FI A H GC + +++ + R IL I
Sbjct: 634 HVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHA 693
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 694 CTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTM 753
Query: 237 ----AVHYIVEELLNSDQ--ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
A+ I+ + + +L + D+YGNYVIQ +L +D ++ LV+++
Sbjct: 754 EQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGED----YKMLVSRIMPL 809
Query: 291 LAALRVMKYG 300
+ L+ YG
Sbjct: 810 MPLLKKCSYG 819
>gi|442618164|ref|NP_001262404.1| pumilio, isoform H [Drosophila melanogaster]
gi|440217235|gb|AGB95786.1| pumilio, isoform H [Drosophila melanogaster]
Length = 921
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 511 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 570
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 571 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 625
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 626 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 685
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 686 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 741
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 742 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 797
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 798 ALRKYTYGKHINAKLEK 814
>gi|195111827|ref|XP_002000478.1| GI22503 [Drosophila mojavensis]
gi|193917072|gb|EDW15939.1| GI22503 [Drosophila mojavensis]
Length = 871
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 146/308 (47%), Gaps = 21/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q + +
Sbjct: 434 QHGSRFIQQKLERATAAEKQMVFNEILGAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 493
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 494 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 548
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E F+ A L+ H GC + +++ + IL + +
Sbjct: 549 QKCIECVDPAALQFVINAFKGQVYSLSTHPYGCRVIQRILEHCTPEQTTPILDELHEHTE 608
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 609 NLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 664
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+
Sbjct: 665 RSERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---KKLMTKIRPHMT 720
Query: 293 ALRVMKYG 300
ALR YG
Sbjct: 721 ALRKYTYG 728
>gi|386765393|ref|NP_001247002.1| pumilio, isoform F [Drosophila melanogaster]
gi|383292588|gb|AFH06320.1| pumilio, isoform F [Drosophila melanogaster]
Length = 925
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 515 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 574
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 575 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 629
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 630 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 689
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 690 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 745
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 746 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 801
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 802 ALRKYTYGKHINAKLEK 818
>gi|349916591|dbj|GAA27968.1| pumilio homolog 1 [Clonorchis sinensis]
Length = 1618
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 77/341 (22%), Positives = 139/341 (40%), Gaps = 54/341 (15%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +F + + LM +G +V KF E Q ++ +I
Sbjct: 1038 GSRFIQQKLEQASAVDKTAVFREILPHAYSLMVDVFGNYVIQKFFELGTPEQKQILGQRI 1097
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHV--MSALKRLFKFLMMTKPGSSVI 120
Q L S+ +G ++K + +S PL V + L + + G+ V+
Sbjct: 1098 RGQ---VLTLSLQMYGCRVIQKAV----ESVPLDMQVAIIRELDGCVIKCVKDQNGNHVV 1150
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI + + ++ H GC + +++ + IL + +
Sbjct: 1151 QKCIESVPPEHLQFIVDSFTNNVQSISTHSYGCRVIQRILEHCTPEQTAPILAELHQHTE 1210
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-- 238
SL + + GNYV+QHVL I ++G +LS+ K S VV+K + NA
Sbjct: 1211 SLVKDQYGNYVIQHVLEHGKTEDKSRIVDLIKGRVAELSVHKFASNVVEKAVA--NATRA 1268
Query: 239 --HYIVEELL-----------------------------------NSDQILQVASDKYGN 261
H ++ E+L N+ + + D+Y N
Sbjct: 1269 ERHSLINEVLESNYPTDPNDRPRSGDFLALSGSSDGGGSADEPHGNTSILCMMMKDQYAN 1328
Query: 262 YVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
YV+Q L + Q + + L+ +++ HL +LR YG +
Sbjct: 1329 YVVQKML-DVAEQ---PIRKELMNQIRPHLNSLRKYTYGKH 1365
>gi|47208830|emb|CAF90334.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1182
Score = 70.9 bits (172), Expect = 6e-10, Method: Composition-based stats.
Identities = 71/317 (22%), Positives = 136/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 855 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 914
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 915 RI--RGHVLPLA-LQMYGCRVIQKALESISSEQQSDIVRELDGHVLKCVK--------DQ 963
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 964 NGNHVVQKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEE 1023
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ ++ L + + GNYV+QHVL P I +RG + LS K + +K + +
Sbjct: 1024 LHQHSEQLGQDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVLVLSQHKFARTLWEKCVIH 1083
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + D+Y NYV+Q + D QR ++
Sbjct: 1084 SSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI------DMAEPAQRKIIMH 1137
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1138 KIRPHIATLRKYTYGKH 1154
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 53/247 (21%), Positives = 96/247 (38%), Gaps = 28/247 (11%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S + + G + + Q G V K IE L II
Sbjct: 929 GCRVIQKALESISSEQQSDIVRELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFII--D 986
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
F+ Q+F+L S +G ++++++ Q L ++ L + + L + G+ VI
Sbjct: 987 AFKGQVFVL-STHPYGCRVIQRILEHCTQEQTL--PILEELHQHSEQLGQDQYGNYVIQH 1043
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHE------QGCINLNNFIDNMKGSRRKQILHLIS 176
LE I L L+ H+ + C+ + SR ++ L +
Sbjct: 1044 VLEHGRPEDKSKIVAEVRGKVLVLSQHKFARTLWEKCV--------IHSSRAERALLIDE 1095
Query: 177 VNAA---------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
V ++ + + NYVVQ ++++ +P I +R H L G +
Sbjct: 1096 VCCQKDGPHSALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHI 1155
Query: 228 VQKFLKY 234
+ K KY
Sbjct: 1156 LAKLEKY 1162
>gi|255648502|gb|ACU24710.1| pumilo [Bombyx mori]
Length = 309
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 119/269 (44%), Gaps = 9/269 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E Q +
Sbjct: 26 QHGSRFIQQKLERATVQEKQMVFNEIIGAAYSLMTDVFGNYVIQKFFEFGTTEQKTTLAQ 85
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ L ++ +G ++K ++ + P V+ L + + G+ V+
Sbjct: 86 KVRGH---VLNLALQMYGCRVIQKALESI--PPEQQQEVVRELDGHVLKCVKDQNGNHVV 140
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + +L+ + +
Sbjct: 141 QKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQRILEHCTPEQTAPVLNELHAHTD 200
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L + GNYVVQHVL + A+RG + LS K S VV+K + + +N
Sbjct: 201 QLITDQYGNYVVQHVLEHGAGEDRSRLVAAVRGKVLQLSQHKFASNVVEKCVTHATRNER 260
Query: 239 HYIVEEL--LNSDQILQVASDKYGNYVIQ 265
+++EL N + + + D++ NYV+Q
Sbjct: 261 ALLIDELCGFNDNALHVMMKDQFANYVVQ 289
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + Q H L LA GC + ++++ +++
Sbjct: 58 LMTDVFGNYVIQKFFEFGTTEQKTTLAQKVRGHVLNLALQMYGCRVIQKALESIPPEQQQ 117
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+++ + + + ++GN+VVQ + +P + I A G LS G V+Q
Sbjct: 118 EVVRELDGHVLKCVKDQNGNHVVQKCIECVEPSALQFIINAFAGQVYALSTHPYGCRVIQ 177
Query: 230 KFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ L++ + + E ++DQ++ +D+YGNYV+Q L +DR RLV
Sbjct: 178 RILEHCTPEQTAPVLNELHAHTDQLI---TDQYGNYVVQHVLEHGAGEDR----SRLVAA 230
Query: 287 LQQHLAALRVMKYGSN 302
++ + L K+ SN
Sbjct: 231 VRGKVLQLSQHKFASN 246
>gi|321248782|ref|XP_003191239.1| RNA binding protein Pumilio [Cryptococcus gattii WM276]
gi|317457706|gb|ADV19452.1| Pumilio-like protein 2 (Pumilio-2) [Cryptococcus gattii WM276]
Length = 673
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 40/317 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S KLF + ++LM+ +G +V K E ++ Q A +
Sbjct: 305 QHGSRFIQQKLEIATSEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQLQKAALAK 364
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI---------KVVAQSPPLLYHVMSALKRLFKFLM 111
K+ D L S+ +G V+K + K+VA+ P H++ +K
Sbjct: 365 KM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK------- 411
Query: 112 MTKPGSSVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
+ + V+ + + P + + FI H LA H GC L +N++ ++
Sbjct: 412 -SSNANHVVQRMINIGPPQSIPDSFI-----GHVEELAKHPYGCRVLQKAFENLEDKMKR 465
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+L + L+ + GNYV+Q V+ + +P + I L+G L+ K S VV+
Sbjct: 466 SLLDEMHECVIPLTEDQFGNYVIQSVITVGEPEDRNKIINQLKGRITTLARHKFASNVVE 525
Query: 230 KFLKYQNAV--HYIVEELLN-----SDQILQVASDKYGNYVIQTALV---ETMRQDRLSV 279
K L + + +++EL++ ++Q+ + D Y N+ +QT + T R++ L +
Sbjct: 526 KALIHADPADRRVLIKELIDMQPDGTNQVGMLLRDAYANFPLQTGMFAAEPTQREELLEI 585
Query: 280 HQRLVTKLQQHLAALRV 296
L+ L+ R+
Sbjct: 586 VLPLLPPLRHTPVGKRI 602
>gi|242556581|pdb|3GVO|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556583|pdb|3GVT|A Chain A, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
gi|242556584|pdb|3GVT|B Chain B, Structure And Rna Binding Of The Mouse Pumilio-2 Puf
Domain
Length = 351
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 35 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 94
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ ++ L HV+ +K +
Sbjct: 95 RIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 143
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 144 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 203
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 204 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 263
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 264 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 317
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+ LR YG +
Sbjct: 318 KIRPHITTLRKYTYGKH 334
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/241 (20%), Positives = 96/241 (39%), Gaps = 16/241 (6%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L S S ++ + G + + Q G V K IE L II
Sbjct: 109 GCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII--D 166
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+ Q+F+L S +G ++++++ Q+ P+L L + + L+ + G+ VI
Sbjct: 167 AFKGQVFVL-STHPYGCRVIQRILEHCTAEQTLPIL----EELHQHTEQLVQDQYGNYVI 221
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
LE I L L+ H+ + + + + R ++ +
Sbjct: 222 QHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQND 281
Query: 181 -------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ + + NYVVQ ++++ +P I +R H L G ++ K K
Sbjct: 282 GPHSALYTMMKDQYANYVVQKMIDMAEPAQRKIIMHKIRPHITTLRKYTYGKHILAKLEK 341
Query: 234 Y 234
Y
Sbjct: 342 Y 342
>gi|219110179|ref|XP_002176841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411376|gb|EEC51304.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 304
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 122/257 (47%), Gaps = 25/257 (9%)
Query: 29 FTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKV 88
F E M +G ++F K +E + +++ ++ + + AS++ G+ SV+KL+++
Sbjct: 38 FWGEAMVDPFGNYLFQKILEKVTPQERIMLVKSVSPR---LVNASLNLHGTRSVQKLVEL 94
Query: 89 VAQ--------------SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCL-EPSYNHKND 133
AQ + L Y + A RL + G+ VI + L + +Y H +
Sbjct: 95 CAQDEHNQVVGANEESAADILTYSLAPAAARL----CIDSHGNHVIQRILLKLNYKH-SK 149
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
F++ A +A H GC + +D+ R ++ I + L + GNYVVQ
Sbjct: 150 FVFDAVALSVGDVARHRHGCCVIQRCLDSQPTEARSHLVLRIVDKSLELMQDAYGNYVVQ 209
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQI 251
+VL++ + A+C ++ G L++ K S V++K L+ ++E+ ++I
Sbjct: 210 YVLDVCSDQDVQAVCESVAGRVNLLAIQKFSSNVMEKCLERCSDRIKEMYLDEMSRPERI 269
Query: 252 LQVASDKYGNYVIQTAL 268
++ D +GNYV+Q AL
Sbjct: 270 RELMMDPFGNYVVQRAL 286
>gi|313231125|emb|CBY19123.1| unnamed protein product [Oikopleura dioica]
Length = 725
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 140/307 (45%), Gaps = 18/307 (5%)
Query: 1 EEGSQYLQEKL---SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ GS+++Q+KL + GD ++ F + ++ L+ +G +V KF+E + Q
Sbjct: 407 QHGSRFIQQKLERCTPGDRELV---FNEILSSSYNLIIDVFGNYVIQKFLEFGSVEQRVQ 463
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
++ I L S+ +G ++K ++ + P ++ L+ + + G+
Sbjct: 464 LLNSIKGH---VLQLSLQMYGCRVIQKGLEAFSHLPEHQIDIVKELEGHVLKCVKDQNGN 520
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ K +E + +FI A L+ H GC + +++ + QIL I
Sbjct: 521 HVVQKVIECVPSEHLNFIVDAFAGQVYQLSTHPYGCRVIQRILEHCNTDQTAQILDEIHP 580
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L+ + GNYVVQH+L I +RG V L+ K S V++K + +
Sbjct: 581 QTEQLTMDQYGNYVVQHILEHGRADDKTKITGEMRGRVVQLAQHKFASNVIEKCVTSSSR 640
Query: 238 VHY--IVEELLNSDQIL-QVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAA 293
+++E+ S + L + D+Y NYV+Q L + M Q R +LV++++ H+
Sbjct: 641 TTRALMIDEVCGSSEALFTMMKDQYANYVVQKMLDIADMPQKR-----KLVSQMKPHINN 695
Query: 294 LRVMKYG 300
L+ YG
Sbjct: 696 LKRYTYG 702
>gi|157132421|ref|XP_001656036.1| pumilio [Aedes aegypti]
gi|108871194|gb|EAT35419.1| AAEL012420-PA [Aedes aegypti]
Length = 796
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 27/311 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E + Q +
Sbjct: 389 QHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEYGSPEQKQALAQ 448
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
++ + + LA + +G ++K ++ + L HV+ +K +
Sbjct: 449 QV--KGHVLPLA-LQMYGCRVIQKALESIPTEQQQEIVRELDGHVLKCVK--------DQ 497
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 498 NGNHVVQKCIECVEPTALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTSPILAE 557
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ N L + + GNYV+QHVL P + A+RG + LS K S VV+K + +
Sbjct: 558 LHANTEQLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTH 617
Query: 235 QNAVHY--IVEELLN-SDQILQV-ASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQ 289
++EE+ + +D L V D+Y NYV+Q + V Q ++ +H K++
Sbjct: 618 ATRAERALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLH-----KIRP 672
Query: 290 HLAALRVMKYG 300
H+ +L+ YG
Sbjct: 673 HMNSLKKYTYG 683
>gi|195330502|ref|XP_002031942.1| GM26283 [Drosophila sechellia]
gi|194120885|gb|EDW42928.1| GM26283 [Drosophila sechellia]
Length = 873
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 151/317 (47%), Gaps = 23/317 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 463 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 522
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 523 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 577
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 578 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 637
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 638 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 693
Query: 235 QNAVHYIVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ +++E+ N + + + D+Y NYV+Q +++ +L ++L+TK++ H+A
Sbjct: 694 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQK-MIDVSEPTQL---KKLMTKIRPHMA 749
Query: 293 ALRVMKYGS--NKEIQK 307
ALR YG N +++K
Sbjct: 750 ALRKYTYGKHINAKLEK 766
>gi|225683895|gb|EEH22179.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 932
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S DK+F + + +LM+ +G +V K E N+SQ ++
Sbjct: 517 QHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 576
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 577 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 628
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A LA H GC + +++ R+ IL +
Sbjct: 629 HVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDRQAILAELHS 688
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ASL + GNYV+QH+L N E+ + I + V S K S VV+K +++
Sbjct: 689 CSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLV-FSKHKFASNVVEKSIEFGA 747
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I++ L + +L + D+YGNYVIQ L + +R + LV++++
Sbjct: 748 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER----ENLVSQIEP 803
Query: 290 HLAALRVMKYG 300
L L+ YG
Sbjct: 804 QLIHLKKFSYG 814
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ + +AS++ G +S+ + Q P V S L F+
Sbjct: 445 VPRVNLHSNYYPVASLNGLGPASILSRVPHRDQDP--FQVVRSPLLEEFR---------- 492
Query: 119 VILKCLEPSYNHKNDFIYQ--AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
N+KN+ Y+ H + + + G + + +++ + ++ I
Sbjct: 493 ---------TNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQ 543
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+N+ L GNYVVQ + + + ++GH + LS G VVQK L++
Sbjct: 544 LNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHIL 603
Query: 235 QNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL--VETMR-QDRLSVHQRLVTKLQQHL 291
+ +V+EL N +L+ D+ GN+VIQ A+ V T+ Q ++ + V +L H
Sbjct: 604 TDQQASMVKELEN--HVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHP 661
Query: 292 AALRVMK 298
RV++
Sbjct: 662 YGCRVIQ 668
>gi|224126149|ref|XP_002329672.1| predicted protein [Populus trichocarpa]
gi|222870553|gb|EEF07684.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHL 174
G+ VI KC+E K FI A L+ H GC + ++ + Q I+
Sbjct: 50 GNHVIQKCIESVPAEKIGFIISAFRGEVATLSMHPYGCRVIQRVLERCADELQCQFIVDE 109
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
I + L++ + GNYV QHVL P I L GH V LS K S VV+K L+Y
Sbjct: 110 ILESVCILAQDQYGNYVTQHVLERGKPQERCQIISKLSGHIVTLSQHKFASNVVEKCLEY 169
Query: 235 QNAV--HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVTK 286
A I++E+L +D +L + D+Y NYV+Q L D + QR L+ +
Sbjct: 170 GGATEREIIIQEILGQNEGNDNLLIMMKDQYANYVVQKIL------DTCTDIQRAMLLNR 223
Query: 287 LQQHLAALRVMKYGSN 302
++ H+ AL+ YG +
Sbjct: 224 IRTHVHALKKYTYGKH 239
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 160 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLS 219
+D ++ ++ Q++ + + R ++GN+V+Q + I I A RG LS
Sbjct: 22 LDVIELDQKAQLVRELDGHVMKCVRDQNGNHVIQKCIESVPAEKIGFIISAFRGEVATLS 81
Query: 220 LTKCGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR 276
+ G V+Q+ L+ + +IV+E+L S IL A D+YGNYV Q L Q+R
Sbjct: 82 MHPYGCRVIQRVLERCADELQCQFIVDEILESVCIL--AQDQYGNYVTQHVLERGKPQER 139
Query: 277 LSVHQRLVTKLQQHLAALRVMKYGSN 302
++++KL H+ L K+ SN
Sbjct: 140 C----QIISKLSGHIVTLSQHKFASN 161
>gi|449019193|dbj|BAM82595.1| similar to translational repressor pumilio [Cyanidioschyzon merolae
strain 10D]
Length = 1506
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 77/336 (22%), Positives = 141/336 (41%), Gaps = 52/336 (15%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFE---LMSGQYGRFVFGKFIESCNESQLAL 57
+ GS+++Q KL + D++ WV+ E L++ +G +V K +E L
Sbjct: 1038 QHGSRFIQTKLETATP---DQVGWVLQEVLAEMNRLVTDVFGNYVVQKLLEHGTARDLQA 1094
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLM 111
I +K+ + L S+ +G +V+K ++V+ S L HV+ ++
Sbjct: 1095 IAMKLKNR---ILALSLHMYGCRAVQKALEVLPASTQAELVIELDGHVLKCIR------- 1144
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ VI KC+E FI A + LA H GC + ++ ++ I
Sbjct: 1145 -DQNGNHVIQKCIERVPGQHVQFIVDAVRGQAVSLAEHSYGCRVIQRILEYSPEEQKVPI 1203
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ I +L R + GNYV+QHV+ I +R + +S K S VV++
Sbjct: 1204 MREIMQACRTLIRDQYGNYVIQHVVEHGKEEERAHILRMVRDQCISMSQHKYASNVVERC 1263
Query: 232 LKYQNAV--HYIVEELL-----------------------NSDQILQVASDKYGNYVIQT 266
L++ + +++ LL NS ++ + D++GNYV+Q
Sbjct: 1264 LQHGSPADRKALIDILLGRSDVAGSGSGGGGSSGATALPRNSVPLIDLVQDQFGNYVVQR 1323
Query: 267 ALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
L + R Q+ L+ +L ++ YG +
Sbjct: 1324 VLDVAGDEQR----QQAAELLRANLNVIKRFSYGKH 1355
>gi|255080292|ref|XP_002503726.1| predicted protein [Micromonas sp. RCC299]
gi|226518993|gb|ACO64984.1| predicted protein [Micromonas sp. RCC299]
Length = 806
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 147/309 (47%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V +L++ +G +V KF+E + Q L+
Sbjct: 449 QHGSRFIQQKLETAEPEEAAAVFAEVLPSAHQLITDVFGNYVVQKFLEYGTDEQRRLLAG 508
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ +D + L S+ +G ++K ++V AQ ++ + + R + + G+
Sbjct: 509 EL--KDHVLSL-SLQMYGCRVIQKALEVFDEAQQTAMVNELDGHVLRCVR----DQNGNH 561
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-ILHLISV 177
VI KC+E + FI + + L L+ H GC + +++ ++ + I+ I
Sbjct: 562 VIQKCIERVPPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHCTPEQKTEGIMDEILR 621
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
A L++ + GNYVVQHVL I L G V L+ K S V++K L Y A
Sbjct: 622 EAVQLAQDQYGNYVVQHVLQHGGEDERRKILATLAGQIVILAQHKFASNVIEKCLTYCGA 681
Query: 238 VH---YIVEELLNSDQ---ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
I E L +D+ + + D++ NYV+Q L +R ++L++++Q HL
Sbjct: 682 EERQIMITEMLGTTDENEPLQAMMKDQFANYVVQKLLEVCDEGER----EQLLSRMQVHL 737
Query: 292 AALRVMKYG 300
L+ YG
Sbjct: 738 PNLKKFTYG 746
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ K LE + + + +H L L+ GC + ++ +++ +++ +
Sbjct: 487 GNYVVQKFLEYGTDEQRRLLAGELKDHVLSLSLQMYGCRVIQKALEVFDEAQQTAMVNEL 546
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ R ++GN+V+Q + P I I + G+ + LS G V+Q+ L++
Sbjct: 547 DGHVLRCVRDQNGNHVIQKCIERVPPARIQFIVSSFYGNVLSLSTHPYGCRVIQRVLEHC 606
Query: 235 --QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ I++E+L + +Q+A D+YGNYV+Q L +R ++++ L +
Sbjct: 607 TPEQKTEGIMDEILR--EAVQLAQDQYGNYVVQHVLQHGGEDER----RKILATLAGQIV 660
Query: 293 ALRVMKYGSN 302
L K+ SN
Sbjct: 661 ILAQHKFASN 670
>gi|158828185|gb|ABW81064.1| AlMpt5-2 [Arabidopsis lyrata subsp. lyrata]
Length = 949
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 22/285 (7%)
Query: 26 VSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKL 85
++G E S QYG + +E+ + ++ +I Q L L+ V FG+ ++K
Sbjct: 637 IAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQ-ALALMTDV--FGNYVIQKA 693
Query: 86 IKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSVILKCLEPSYNHKNDFIYQAALEH 142
I+VV L + +K L +M + G+ V+ KC+E +FI +
Sbjct: 694 IEVVD-----LDQKIKMVKELDGHVMRCVRDQNGNHVVQKCIECVPEENIEFIISTFFGN 748
Query: 143 CLYLACHEQGCINLNNFIDNM-KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
+ L+ H GC + +++ + +++ I + L++ + GNYV+QHVL P
Sbjct: 749 VVTLSTHPYGCRVIQRVLEHCHDPDTQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKP 808
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELLNS---DQILQ-VA 255
I L G V +S K S VV+K L + ++V E+L + ++ LQ +
Sbjct: 809 DERTVIIKELAGKIVQMSQQKFASNVVEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMM 868
Query: 256 SDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
D++ NYV+Q L Q R + ++ +++ HL AL+ YG
Sbjct: 869 KDQFANYVVQKVLETCDDQQR----ELILGRIKVHLNALKKYTYG 909
>gi|440638601|gb|ELR08520.1| hypothetical protein GMDG_03219 [Geomyces destructans 20631-21]
Length = 976
Score = 70.5 bits (171), Expect = 9e-10, Method: Composition-based stats.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM+ +G +V K E N+ Q IL
Sbjct: 559 QHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKLFEHGNQIQKK--IL 616
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ V Q L+ + + + + K + G+
Sbjct: 617 AEIMKNHVIEL-SLQMYGCRVVQKALEHVLADQQAELVRELQADVLKCVK----DQNGNH 671
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E + FI A LA H GC + ++ + +L +
Sbjct: 672 VIQKAIERCPTEQVQFILDAFRTQVHTLATHPYGCRVIQRMLEYCTPPDQTSVLKELFAC 731
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL------ 232
A L + GNYVVQHV+ P + + + LS K S VV++ +
Sbjct: 732 AQMLIVDQYGNYVVQHVIQHGKPEDQAKLISMVTNQVLTLSKHKFASNVVERSISCGTTE 791
Query: 233 KYQNAVHYIVEELLNSDQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ Q V IV + LQ+ D+YGNYVIQ L +R V ++ L
Sbjct: 792 QRQTIVAKIVALESDGSSPLQLMMKDQYGNYVIQKLLGLLQGDER----DAFVEDIKPQL 847
Query: 292 AALRVMKYG 300
L+ YG
Sbjct: 848 MQLKKYNYG 856
Score = 46.2 bits (108), Expect = 0.017, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++QI I NA L GNYV+Q + +
Sbjct: 551 HVVEFSGDQHGSRFIQMKLETANSDEKEQIFREIQPNALQLMTDVFGNYVIQKLFEHGNQ 610
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKY 259
+ ++ H ++LSL G VVQK L++ A +V EL +L+ D+
Sbjct: 611 IQKKILAEIMKNHVIELSLQMYGCRVVQKALEHVLADQQAELVREL--QADVLKCVKDQN 668
Query: 260 GNYVIQTAL 268
GN+VIQ A+
Sbjct: 669 GNHVIQKAI 677
>gi|385304539|gb|EIF48553.1| protein of the mitochondrial outer surface [Dekkera bruxellensis
AWRI1499]
Length = 419
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 22/304 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L+ + + +F + ++ +LM+ +G +V K+ E NE+Q+ ++
Sbjct: 97 QHGSRFIQQQLADASAEDKEMIFNEIRNYSIDLMTDVFGNYVIQKYFEYGNETQIKILFE 156
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F S+ +G V+K + V+ L V+ LK L+ + G+ VI
Sbjct: 157 SMKGN---FNFLSMQMYGCRVVQKCMDSVSLDDRL--QVVDELKPNILNLVKDQNGNHVI 211
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E + FI ++ +L+ H GC + ++ R IL +
Sbjct: 212 QKVIESIPTSRTPFILESLKHQIYHLSTHPYGCRVIQRLLEYSDEEDRAYILGELKGFIY 271
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QH++ + I + + V+LS K S V+K + +Q+A +
Sbjct: 272 YLVQDQFGNYVIQHIIEHGSEQYTEQILQIVIDNLVNLSKHKFASNAVEKCIVHQSAENR 331
Query: 240 -YIVEELL----NSDQILQVAS-------DKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ LL N D L S D + NYV+Q +VE + ++ LV K+
Sbjct: 332 RRVYNALLAKNENKDSPLDENSSLSIMMKDPFANYVVQ-KMVELVDGPERAL---LVYKI 387
Query: 288 QQHL 291
+Q+L
Sbjct: 388 RQYL 391
>gi|302654395|ref|XP_003019005.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
gi|291182695|gb|EFE38360.1| mRNA binding protein Pumilio 2, putative [Trichophyton verrucosum
HKI 0517]
Length = 851
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 18/278 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 460 QHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLAQ 519
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G+
Sbjct: 520 QM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNGN 571
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E N FI A H GC + +++ + R IL I
Sbjct: 572 HVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHA 631
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 632 CTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTM 691
Query: 237 ----AVHYIVEELLNSDQ--ILQVASDKYGNYVIQTAL 268
A+ I+ + + +L + D+YGNYVIQ +L
Sbjct: 692 EQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 729
>gi|260813527|ref|XP_002601469.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
gi|229286765|gb|EEN57481.1| hypothetical protein BRAFLDRAFT_286861 [Branchiostoma floridae]
Length = 734
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 142/314 (45%), Gaps = 26/314 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E Q +
Sbjct: 404 QHGSRFIQQKLERATPAEKQMVFNEILSAAYQLMTDVFGNYVIQKFFEFGTPEQKNALAQ 463
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLL---YHVMSALKRLFKFLMM---TK 114
KI + + LA + +G ++K ++ + PP L Y V +K L ++ +
Sbjct: 464 KI--RGHVLPLA-LQMYGCRVIQKALECI---PPDLKFSYQV-ELVKELDGHVLKCVKDQ 516
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E + FI A L+ H GC + +++ + IL
Sbjct: 517 NGNHVVQKCIECVDPSELQFIIDAFRGQVFALSTHPYGCRVIQRILEHCTVEQTIPILEE 576
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ N L + + GNYV+QHVL P I LRG + LS K S VV+K + +
Sbjct: 577 LHENTERLVQDQYGNYVIQHVLEHGRPEDKSKIVNELRGKVLALSQHKFASNVVEKCVSH 636
Query: 235 QNAVH--YIVEELLN-----SDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ +++E+ + + + D++ NYV+Q + V +Q ++ +H K
Sbjct: 637 SSRAERAMLIDEVCSYCDGTHSALYTMMKDQFANYVVQKMIDVAEPQQRKILMH-----K 691
Query: 287 LQQHLAALRVMKYG 300
++ H+A LR YG
Sbjct: 692 IRPHIATLRKYTYG 705
>gi|167384832|ref|XP_001737111.1| pumilio [Entamoeba dispar SAW760]
gi|165900241|gb|EDR26620.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 526
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+ + G+ K++ + EL S + +V K +E ES+ I+
Sbjct: 221 GSRTVQQSIEKGNETERQKIWRALQDHIVELSSDLFANYVIQKALEFIPESRH---IVPQ 277
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + L ++ +G V+K ++ + L + L++ + + G+ VI K
Sbjct: 278 KMKGNVLRL-TLHMYGCRVVQKAVEYASVKDRRL--LFEELRKSLVRCIEDQNGNHVIQK 334
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E I A L H GC + I+++ ++L +I ++ L
Sbjct: 335 CVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDL 394
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHY 240
+ + GNYVVQ+VL P I ++G+ V LS+ K S V++K K+ N
Sbjct: 395 TEDQYGNYVVQNVLERGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQ 454
Query: 241 IVEELLNSDQILQVASDKYGNYVIQ 265
I+EE+ ++ ILQ+ D++ NYV+Q
Sbjct: 455 ILEEIYQNNGILQMMQDQFANYVVQ 479
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K LE P H + Q + L L H GC + ++ R+ + +
Sbjct: 260 VIQKALEFIPESRH---IVPQKMKGNVLRLTLHMYGCRVVQKAVEYASVKDRRLLFEELR 316
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+ ++GN+V+Q + D ++ I AL+G ++ G VVQ+ ++
Sbjct: 317 KSLVRCIEDQNGNHVIQKCVEKGDRQMVMDIVNALQGIVLECCKHPYGCRVVQRVIE--- 373
Query: 237 AVHY-IVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
+V Y V ELL L + D+YGNYV+Q L DR ++ Q +++ ++
Sbjct: 374 SVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLERGYPNDRHNILQ----QIKGNIVR 429
Query: 294 LRVMKYGSN 302
L + KY SN
Sbjct: 430 LSMGKYSSN 438
>gi|409046090|gb|EKM55570.1| hypothetical protein PHACADRAFT_95334 [Phanerochaete carnosa
HHB-10118-sp]
Length = 372
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+K+ + D +F ++ +L+ +G +V KF E NE Q +L
Sbjct: 52 QHGSRFIQQKIETADEEEKQIIFDEIMPHHALKLIQDVFGNYVVQKFFEHGNELQTSL-- 109
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
L T + + L S+ +G V+K I+ Q + + + R K G+
Sbjct: 110 LAKTMEGHILPL-SLQMYGCRVVQKAIEHMPAEQQSAFVDELAGDVLRCVK----DANGN 164
Query: 118 SVILKCLEPSYNHKNDFIYQAALE-HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI + +E + FI AA + H LA H GC L +N+ + + +L +
Sbjct: 165 HVIQRLIESVPPERLTFI--AAFQGHVCDLATHPYGCRVLQRCFENLPEHQTRVLLSEVQ 222
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KY 234
+A L + + GNYV+Q VL P +I L G + +S K S VV+K L
Sbjct: 223 EHALQLMQDQFGNYVIQFVLEHGQPQDRASIVSKLHGQMLHMSRHKFASNVVEKALVMAE 282
Query: 235 QNAVHYIVEELL-----NSDQILQVASDKYGNYVIQTALV 269
++ ++EE++ + + + D++ NYV+Q AL+
Sbjct: 283 PSSRRALIEEVMAPRPDGPNPFVSMMKDQFANYVLQRALM 322
>gi|226293282|gb|EEH48702.1| mRNA binding protein Pumilio 2 [Paracoccidioides brasiliensis Pb18]
Length = 958
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S DK+F + + +LM+ +G +V K E N+SQ ++
Sbjct: 543 QHGSRFIQHMLESANSDEKDKVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 602
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 603 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 654
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A LA H GC + +++ R+ IL +
Sbjct: 655 HVIQKAVERVPTVHIQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCNEGDRQAILAELHS 714
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ASL + GNYV+QH+L N E+ + I + V S K S VV+K +++
Sbjct: 715 CSASLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLV-FSKHKFASNVVEKSIEFGA 773
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I++ L + +L + D+YGNYVIQ L + +R + LV++++
Sbjct: 774 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER----ENLVSQIEP 829
Query: 290 HLAALRVMKYG 300
L L+ YG
Sbjct: 830 QLIHLKKFSYG 840
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 105/247 (42%), Gaps = 30/247 (12%)
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ + +AS++ G +S+ + Q P V S L F+
Sbjct: 471 VPRVNLHSNYYPVASLNGLGPASILSRVPHRDQDP--FQVVRSPLLEEFR---------- 518
Query: 119 VILKCLEPSYNHKNDFIYQ--AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
N+KN+ Y+ H + + + G + + +++ + ++ I
Sbjct: 519 ---------TNNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDKVFREIQ 569
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+N+ L GNYVVQ + + + ++GH + LS G VVQK L++
Sbjct: 570 LNSLQLMTDVFGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHIL 629
Query: 235 QNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL--VETMR-QDRLSVHQRLVTKLQQHL 291
+ +V+EL N +L+ D+ GN+VIQ A+ V T+ Q ++ + V +L H
Sbjct: 630 TDQQASMVKELEN--HVLKCVKDQNGNHVIQKAVERVPTVHIQFIINAFKGQVNRLAAHP 687
Query: 292 AALRVMK 298
RV++
Sbjct: 688 YGCRVIQ 694
>gi|302504613|ref|XP_003014265.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
gi|291177833|gb|EFE33625.1| mRNA binding protein Pumilio 2, putative [Arthroderma benhamiae CBS
112371]
Length = 883
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 492 QHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLAQ 551
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G+
Sbjct: 552 QM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNGN 603
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E N FI A H GC + +++ + R IL I
Sbjct: 604 HVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHA 663
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 664 CTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTM 723
Query: 237 ----AVHYIVEELLNSDQ--ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
A+ I+ + + +L + D+YGNYVIQ +L D ++ LV+++
Sbjct: 724 EQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSLSVLEGDD----YKMLVSRILPL 779
Query: 291 LAALRVMKYG 300
+ L+ YG
Sbjct: 780 MPLLKKCSYG 789
>gi|134107804|ref|XP_777513.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260205|gb|EAL22866.1| hypothetical protein CNBB0870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 673
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 43/289 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + KLF + ++LM+ +G +V K E ++ Q A +
Sbjct: 305 QHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQLQKAALAK 364
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI---------KVVAQSPPLLYHVMSALK-----RL 106
K+ D L S+ +G V+K + K+VA+ P H++ +K +
Sbjct: 365 KM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVKSSNANHV 418
Query: 107 FKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 166
+ ++ T P S+ + FI H LA H GC L +N+
Sbjct: 419 VQRIINTGPPQSI-----------PDSFI-----GHVEELAKHPYGCRVLQKTFENLDDK 462
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
++ +L + SL+ + GNYV+Q V+ + P + + LRG + K S
Sbjct: 463 MKRSLLDEMHKCVISLTEDQFGNYVIQSVITVGKPEDRNKVISQLRGRVTTFARHKFASN 522
Query: 227 VVQKFLKYQNAV--HYIVEELL-----NSDQILQVASDKYGNYVIQTAL 268
VV+K L + + +++EL+ ++Q+ + D Y N+ +QT +
Sbjct: 523 VVEKALIHADPADRRVLIDELIGMQLDGTNQVGMLLRDAYANFPLQTGM 571
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
L L+ GC + +D++ +R +I+ + + + + N+VVQ ++N P
Sbjct: 370 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRIINTGPP- 428
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ--ILQVASDKYG 260
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 429 --QSIPDSFIGHVEELAKHPYGCRVLQK--TFENLDDKMKRSLLDEMHKCVISLTEDQFG 484
Query: 261 NYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
NYVIQ+ + +DR +++++L+ + K+ SN
Sbjct: 485 NYVIQSVITVGKPEDR----NKVISQLRGRVTTFARHKFASN 522
>gi|15219041|ref|NP_173581.1| protein pumilio 20 [Arabidopsis thaliana]
gi|332192006|gb|AEE30127.1| protein pumilio 20 [Arabidopsis thaliana]
Length = 308
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 32/232 (13%)
Query: 45 KFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALK 104
+ I ++ +L + +T FL+ + + GS ++KL+ L +A+
Sbjct: 70 QMISKLDQRKLQTMASLLTSDPDYFLMIARNMNGSKRIQKLLGKTDDVDALF---AAAIL 126
Query: 105 RLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK 164
R F ++ K S V+ + + K +Y EH L+ A H
Sbjct: 127 RRFLHIITDKYASYVVRRGMTVFDKKKKKAMY----EHILHYASH--------------- 167
Query: 165 GSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCG 224
+R K +A LS GN+V+Q VL L D + I +LRGH+VDLS K G
Sbjct: 168 IARDK--------HALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQKYG 219
Query: 225 SFVVQKFLKYQNAVHYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQ 274
S+VV L+ + ++ +VEEL+ D ++++A ++YGN+++ AL T ++
Sbjct: 220 SYVVDVLLETKESMVVVVEELMECEGDMLMRLARNEYGNFLVCKALRVTQKE 271
>gi|403357293|gb|EJY78273.1| Pumilio [Oxytricha trifallax]
Length = 1120
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 27/284 (9%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+++Q++L LF + + +LM +G +V K +E N++Q ++ +I
Sbjct: 672 SRFIQQRLEDAKDEEKQLLFNELMNDSQKLMKDVFGNYVIQKMLEYGNQNQRTMLYQQIK 731
Query: 64 FQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKP-GSSVI 120
+ S D++G V+K ++VV Q L+ + ++ L + P G+ VI
Sbjct: 732 GN---MIPLSQDQYGCRVVQKALEVVTTQQQDDLIGEIRPQVQ-----LCVEDPNGNHVI 783
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E + K FI A ++ H+ GC + +++ K + K IL +
Sbjct: 784 QKIIEQVSSEKVQFIVDAFKGRVYEMSVHQYGCRVIQRMLEHCKEDQIKPILVEVFERVL 843
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L++ GNYV+ HVL + ++ V LS+ K GS V++K L++ Q
Sbjct: 844 DLTKDLYGNYVISHVLEHGAQKYKTFVINKMKKRVVQLSIHKFGSNVIEKCLQHSDQKQK 903
Query: 239 HYIVEELL------------NSDQ--ILQVASDKYGNYVIQTAL 268
I+EE++ NS ++ V DKYGN+VIQ L
Sbjct: 904 DDIIEEIIQVRLMDDETYQSNSQNFTLMDVMKDKYGNFVIQRVL 947
>gi|395333575|gb|EJF65952.1| ARM repeat-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 410
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 146/313 (46%), Gaps = 27/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL S S ++ +F +V + +LM +G +V K E +Q A ++
Sbjct: 59 QHGSRFIQQKLESASSEEMEIVFDEIVPQYAVQLMQDVFGNYVVQKMFEYGTAAQKARLV 118
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLY--HVMSALKRLFKFLMMTKPGS 117
T + Q+ L S+ +G V+K I+ V +++ + ++ R K G+
Sbjct: 119 --STMEGQVLGL-SLQMYGCRVVQKAIEYVGPDQQVMFVQELSPSVLRCVK----DANGN 171
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E + F+ A +Y L+ H GC L + + + + +L +
Sbjct: 172 HVIQKIIEHVVPERLAFV--NAFRGSVYELSTHPYGCRVLQRCFEYLPDEQTRPLLDELH 229
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KY 234
++L + GNYVVQ VL P I L G +++ K S V +K L
Sbjct: 230 KYVSNLMIDQFGNYVVQFVLEHGTPQDRAMIIAKLTGQMNNMAKHKFASNVCEKALVTAD 289
Query: 235 QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
++ +++E++ Q ++ + D +GNYV+Q AL + + ++L++K++
Sbjct: 290 PDSRRQLIDEIMTPKQQDGPSPLMSLMKDSFGNYVLQRALTVAEGEQK----EQLISKVR 345
Query: 289 QHLAALRVMKYGS 301
HL +R +Y S
Sbjct: 346 PHLVNMR--RYSS 356
>gi|313229012|emb|CBY18164.1| unnamed protein product [Oikopleura dioica]
Length = 750
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 146/308 (47%), Gaps = 22/308 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +++L+ +G +V KF+E Q I+
Sbjct: 434 QHGSRFIQQKLERCNPSDRQLVFNEIISHSYQLIIDVFGNYVIQKFLEFGTAEQKQQIVD 493
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I + L S+ +G ++ ++ + Q ++ +++ L+ + + G+ VI
Sbjct: 494 NIKGK---VLQLSLQMYGCRVIQTALESLNQEQQMI--IVNELQNSILRCVKDQNGNHVI 548
Query: 121 LKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
K +E P+ N +FI A + L+ H GC + +++ + I+ I N
Sbjct: 549 QKIIECLPADNL--EFIISAFNGQVVGLSTHAYGCRVVQRVLEHCTEEQYMPIMEEIHKN 606
Query: 179 AASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
L + + GNYV+QH+LN +ED + I A+ G V LS K S V++K +
Sbjct: 607 HEMLIQDQYGNYVIQHILNRGKMEDRQM---ILRAVMGRIVTLSQHKFASNVIEKCVTTS 663
Query: 236 NAVHY--IVEELLNS-DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
N ++EE+ S D + + D++ NYV+Q L R Q++V K++ H++
Sbjct: 664 NRTERALLIEEVCQSPDSLFIMMKDQFANYVVQKMLDMGDSAQR----QKMVQKMKPHVS 719
Query: 293 ALRVMKYG 300
L+ YG
Sbjct: 720 NLKRFTYG 727
>gi|402225601|gb|EJU05662.1| ARM repeat-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 356
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 21/319 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q KL + +F +++G L++ +G +V K IE E++ I
Sbjct: 49 QHGSRFIQIKLDTATPEEKQMVFDEILAGNIMPLVTDVFGNYVIQKLIEFGGETERNAIF 108
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ FL+ S +G V+K I+ + +P +++ L + G+ V
Sbjct: 109 EAMQGH---FLILSWHMYGCRVVQKAIEYI--TPEQQSQLIAELAPDIMKCVKDANGNHV 163
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
+ K +E + F+ A + +Y L+ H GC L ++++ + + +L + +
Sbjct: 164 VQKLIERVSPDRLTFV--EAFKGSVYDLSTHTYGCRVLQRCLEHLTEEQTRPLLDELHEH 221
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A+L + + GNYVVQ VL P + LRG + ++ K S V +K L ++
Sbjct: 222 TANLMQDQFGNYVVQFVLEHGQPEDRARVIAKLRGQMLMMACHKFASNVCEKALMTADSE 281
Query: 239 --HYIVEELLNS-----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+++EL+ + + D++ NYV+Q AL + D+L Q L ++++ HL
Sbjct: 282 SRRLLIDELMTPKPNGVSPVQLMMKDQFANYVLQRAL-SVVEGDQL---QALASRIRPHL 337
Query: 292 AALRVMKYGS-NKEIQKKK 309
++R GS NK + K
Sbjct: 338 GSMRKFTAGSFNKHLTASK 356
>gi|401828248|ref|XP_003888416.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
gi|392999688|gb|AFM99435.1| RNA binding repeat domain-containing protein [Encephalitozoon
hellem ATCC 50504]
Length = 529
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 126/275 (45%), Gaps = 23/275 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q K+ + + F ++ +L + +G +V K I E + +
Sbjct: 228 QEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNYVIQKIIPLLTEEERTRLTA 287
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ Q L SV +G ++KL+ V P + ++ +K L+ + G+ VI
Sbjct: 288 SLVGQIHLL---SVHPYGCRVIQKLVDV----SPDVDFILEEVKGNLLELIEDQNGNHVI 340
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E + + I + E+ L+LA H+ GC + ++ K K I+ ++ N
Sbjct: 341 QKCIEKCKDRR--IILKQFSENSLFLATHKYGCRVIQRMLEFCKEEEIKDIVEVLISNIK 398
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + GNYV+QH+L + E +I+ I + Y +LS K S VV++ +K N
Sbjct: 399 TLVDDQYGNYVIQHILTVGKEKERNLVIEKI---IEKSY-ELSKCKFSSNVVEQCVKLSN 454
Query: 237 A------VHYIVEELLNSDQILQVASDKYGNYVIQ 265
+ +E + + + D YGNYV+Q
Sbjct: 455 NGQREQFLEKFLEPVGAKPGMYSMCIDMYGNYVVQ 489
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
KN F + E C+ ++ ++G + +DN+ + I+ AA LS + GNY
Sbjct: 209 KNVFGGTSMKEICISVSKDQEGSRCIQRKMDNISKEEISWFFNNIADAAADLSANLFGNY 268
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ 250
V+Q ++ L + +L G LS+ G V+QK + V +I+EE+ +
Sbjct: 269 VIQKIIPLLTEEERTRLTASLVGQIHLLSVHPYGCRVIQKLVDVSPDVDFILEEVKGN-- 326
Query: 251 ILQVASDKYGNYVIQTALVETMRQDRLSVHQ 281
+L++ D+ GN+VIQ +E + R+ + Q
Sbjct: 327 LLELIEDQNGNHVIQKC-IEKCKDRRIILKQ 356
>gi|367049768|ref|XP_003655263.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
gi|347002527|gb|AEO68927.1| hypothetical protein THITE_2118754 [Thielavia terrestris NRRL 8126]
Length = 916
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 151/318 (47%), Gaps = 30/318 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++QEKL S + D++F + LM +G +V KF E ++ Q +++
Sbjct: 523 QSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFEHGDQIQKKVLLR 582
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFL--MMTKP-GS 117
+ + + S+ + V+K ++ V L+ +K L + + T P G+
Sbjct: 583 AMKGK---VMDLSMQMYACRVVQKALENV-----LVEQQAELVKELEADVVKVATDPHGN 634
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
V+ + + FI A LA + C + +++ + + + +
Sbjct: 635 HVVQQAIALVPRQHIGFIIGAFKGRVCELASQQYACRVIQRILEHGTEADKAAVTQELHK 694
Query: 178 NAASLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+A +L +H GNYV+QHVL+ ED +ID + L V LS +KC S VV+K +
Sbjct: 695 SAETLIKHPYGNYVIQHVLHHGRAEDRSKIIDVVMADL----VALSKSKCASNVVEKCIA 750
Query: 234 Y-----QNAV-HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ Q A+ +V + ++ + Q+A D+YGNYV+Q + + Q + + L+ KL
Sbjct: 751 FGTREEQRAIWDRLVADGEDNCPLFQLAKDQYGNYVVQKLIALPVDQHK----EALLQKL 806
Query: 288 QQHLAALRVMKYGSNKEI 305
+ HL ++R G+ K++
Sbjct: 807 KAHLQSVRKAP-GAGKQM 823
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + +++ G + Q+ I NA L + GNYV+Q D
Sbjct: 515 HVVEFSSDQSGSRFIQEKLESANGDEKDQVFREIEPNAVPLMKDLFGNYVIQKFFEHGDQ 574
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK----YQNAVHYIVEELLNSDQILQVASD 257
+ A++G +DLS+ VVQK L+ Q A +V+EL +++VA+D
Sbjct: 575 IQKKVLLRAMKGKVMDLSMQMYACRVVQKALENVLVEQQA--ELVKEL--EADVVKVATD 630
Query: 258 KYGNYVIQTALVETMRQ 274
+GN+V+Q A+ RQ
Sbjct: 631 PHGNHVVQQAIALVPRQ 647
>gi|430812324|emb|CCJ30264.1| unnamed protein product [Pneumocystis jirovecii]
Length = 738
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 144/310 (46%), Gaps = 24/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+ L + + +F + + +LM+ +G +V KF+E ++ Q L++
Sbjct: 415 QHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFMEHGDQMQKTLLLE 474
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S+ +G V+K ++ + + +S +K L ++ + G+
Sbjct: 475 QMKGH---VLTLSLQTYGCRVVQKALEYIQ-----IDQKISLVKELNGNVLKCIKNQNGN 526
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E F+ LA H GC + ++ S+ + ++ + +
Sbjct: 527 HVIQKIIEKVPIEHIQFLINTFQGQIYVLATHPYGCRVIQRMLEYC--SQTRDLIKELHL 584
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
A +L R + GNY +QH++ +P I ++G+ S K S VV+K + Y
Sbjct: 585 YAQNLIRDQYGNYCIQHIIEKGEPEDRSKIISVVKGNVFRFSRHKFASNVVEKCITYGTD 644
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+++E++ S++ +L + D+Y NYVI+ AL R +L+++++ H
Sbjct: 645 EEKKLLIDEIIESNENGMSFLLPMIKDQYANYVIKKALDVACDDQR----NKLISEIKPH 700
Query: 291 LAALRVMKYG 300
L L+ +G
Sbjct: 701 LQFLKKNVHG 710
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 98/205 (47%), Gaps = 15/205 (7%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K +E + + + H L L+ GC + ++ ++ ++
Sbjct: 447 LMTDVFGNYVIQKFMEHGDQMQKTLLLEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKI 506
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICF---ALRGHYVDLSLTKCGSF 226
++ ++ N ++++GN+V+Q ++ + I+ I F +G L+ G
Sbjct: 507 SLVKELNGNVLKCIKNQNGNHVIQKII---EKVPIEHIQFLINTFQGQIYVLATHPYGCR 563
Query: 227 VVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR---LSVHQRL 283
V+Q+ L+Y + +++EL Q L D+YGNY IQ + + +DR +SV +
Sbjct: 564 VIQRMLEYCSQTRDLIKELHLYAQNL--IRDQYGNYCIQHIIEKGEPEDRSKIISVVKGN 621
Query: 284 VTKLQQHLAALRVMK----YGSNKE 304
V + +H A V++ YG+++E
Sbjct: 622 VFRFSRHKFASNVVEKCITYGTDEE 646
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++ + I N+ L GNYV+Q + D
Sbjct: 407 HIVEFSGDQHGSRFIQQALEGASAEDKEIVFQEIFPNSLQLMTDVFGNYVIQKFMEHGDQ 466
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASDKY 259
+ ++GH + LSL G VVQK L+Y I V+EL + +L+ ++
Sbjct: 467 MQKTLLLEQMKGHVLTLSLQTYGCRVVQKALEYIQIDQKISLVKEL--NGNVLKCIKNQN 524
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
GN+VIQ ++E + + + Q L+ Q + L YG
Sbjct: 525 GNHVIQ-KIIEKVPIEHI---QFLINTFQGQIYVLATHPYG 561
>gi|406607837|emb|CCH40775.1| putative translational repressor [Wickerhamomyces ciferrii]
Length = 729
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 154/333 (46%), Gaps = 37/333 (11%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G ++LQ+KL D I D +F + +L+ +G ++ K I+ + Q L+I KI
Sbjct: 280 GCRFLQKKLDL-DVSIKDVIFNKIFNNLIDLIINPFGNYLIQKLIDYLSNYQKDLLIEKI 338
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRL-------------FKF 109
LFL+ S++++G+ S++K+I V+ + Y + +K L
Sbjct: 339 --HTYLFLI-SINQYGTRSLQKIIDKVSNT----YQIDLIIKGLQINDVTNGIDDNNIVK 391
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSR 167
L+ G+ VI KC+ K FI + + + ++ H+ GC L ++N ++
Sbjct: 392 LIKDLNGNHVIQKCIFKFPPEKFQFIIDSICINNNIVRISTHKHGCCVLQKLLNNANFNQ 451
Query: 168 RKQILHLISVNAASLSRHRSGNYVVQHVLNL-------EDPFLIDAICFALRGHYVDLSL 220
I ++ + L + GNY++Q + L FLID + + + LS
Sbjct: 452 ILNIAKMLLIYLDDLINDQFGNYIIQFLFELNFLKTSKNISFLIDEFFNKIYNNLIQLSC 511
Query: 221 TKCGSFVVQKF---LKYQNAVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDR 276
K S VV+KF LK++ Y+ E + D + + DK+GNYVIQT + +
Sbjct: 512 LKFSSNVVEKFIKILKFKQNYLYLTEIIKLVDYNFELLIKDKFGNYVIQTLIDQFYDVSE 571
Query: 277 LSVH-QRLVTKLQQHLAALRVMKYGSNKEIQKK 308
LS +L+ ++ +L A++ Y ++IQ K
Sbjct: 572 LSSEMNKLIVNIKSYLPAIKSAPYA--RKIQLK 602
>gi|403340179|gb|EJY69363.1| Pumilio [Oxytricha trifallax]
Length = 1146
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 144/303 (47%), Gaps = 31/303 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+K S + +F + +F LM+ +G +V K E E + + ++
Sbjct: 686 GSRFIQQKYDITSSAEKELIFNEILPESFNLMNDVFGNYVVQKLFEYGTEEHRSTLAEQL 745
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYH---VMSALKRLFKFLMMTKPGSSV 119
+ L L S+ +G V+K ++V++ L+ ++S LK + + G+ V
Sbjct: 746 -LGNVLKLTKSM--YGCRVVQKALEVIS-----LHQQKILVSELKDNIIDCINDQNGNHV 797
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I KC+E +FI + +E L H GC + ++N + + I+ I +
Sbjct: 798 IQKCIEKMPCDDIEFIIKPVIEKTSELCVHTYGCRVIQRVLENSNEAYTRSIIEGILNDL 857
Query: 180 ASLSRHRSGNYVVQHVLN----LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+L+ + GNYV+QH+L ED D + +++G ++LS K S VV+K L+Y
Sbjct: 858 HNLTMDQFGNYVIQHILENGKVQED---KDRVVKSIKGKVIELSNHKFASNVVEKCLQYA 914
Query: 236 NA------------VHYIVEELLNSDQIL-QVASDKYGNYVIQTALVETMRQDRLSVHQR 282
+ +++ E +N + +L Q+ D+YGNYVIQ + + + R + +R
Sbjct: 915 SEKDKAELIEEFLDLNFDEEAAMNQNGVLYQMMKDRYGNYVIQKCIEVSQGKQREILMKR 974
Query: 283 LVT 285
+
Sbjct: 975 ITA 977
>gi|212722650|ref|NP_001132499.1| uncharacterized protein LOC100193958 [Zea mays]
gi|194694542|gb|ACF81355.1| unknown [Zea mays]
Length = 472
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
FI++A ++C LA + G L N +D + ++ I +S + L++ SGN++VQ
Sbjct: 296 FIFEAVAQNCTRLAYQQNGLRLLQNCLDRVSQKQKDYIFTQLSYESLFLAQDSSGNWIVQ 355
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQI 251
VL DP I+ I LR HYV L+ K S VV+ L+ ++ IV E ++
Sbjct: 356 DVLRRGDPSHIEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEEERSVIVYEFISYSHF 415
Query: 252 LQVASDKYGNYVIQTAL 268
+ +D++ N+ + TAL
Sbjct: 416 RDLVTDEFANFALSTAL 432
>gi|395828861|ref|XP_003787581.1| PREDICTED: pumilio homolog 2 [Otolemur garnettii]
Length = 1027
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 24/278 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 739 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 798
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ L HV+ +K +
Sbjct: 799 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 847
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 848 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 907
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 908 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 967
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQ 265
+ +++E+ + + + D+Y NYV+Q
Sbjct: 968 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQ 1005
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H L LA GC + ++++ ++ +++ + + + ++GN+VVQ + P
Sbjct: 803 HVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHVVQKCIECVQP 862
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKY 259
+ I A +G LS G V+Q+ L++ A I+EEL + Q+ D+Y
Sbjct: 863 QSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTE--QLVQDQY 920
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
GNYVIQ L +D+ ++V++++ + AL K+ SN
Sbjct: 921 GNYVIQHVLEHGRPEDK----SKIVSEIRGKVLALSQHKFASN 959
>gi|327309080|ref|XP_003239231.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
gi|326459487|gb|EGD84940.1| pumilio RBD protein [Trichophyton rubrum CBS 118892]
Length = 910
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 18/278 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S +++F + +LM +G +V K E N++Q L+
Sbjct: 519 QHGSRFIQLKLETANSDEKERVFQEIRPNAVQLMMDLFGNYVIQKLFEHGNQAQKRLLAQ 578
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ Q + L SV +G +V+K ++ V L+ + +K L +M + G+
Sbjct: 579 QM--QGNICSL-SVQTYGCRTVQKALEHV-----LVEQQATMVKELEDSVMKCVTNQNGN 630
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E N FI A H GC + +++ + R IL I
Sbjct: 631 HVIQKAIERVPNQHIRFIIDEFRGQIPRYATHTYGCRVIQRMLEHCPLADRLSILAEIHA 690
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
SL + GNYV+QH++ + + I + G V S K S VV+K + +
Sbjct: 691 CTPSLISDQYGNYVIQHIIEFGEEVDKNKIISIVLGQAVHFSKHKFASNVVEKSITFGTM 750
Query: 237 ----AVHYIVEELLNSDQ--ILQVASDKYGNYVIQTAL 268
A+ I+ + + +L + D+YGNYVIQ +L
Sbjct: 751 EQRLAITRILSAVNEKGEGPLLGLMRDQYGNYVIQKSL 788
>gi|169597459|ref|XP_001792153.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
gi|111070044|gb|EAT91164.1| hypothetical protein SNOG_01515 [Phaeosphaeria nodorum SN15]
Length = 917
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 136/289 (47%), Gaps = 19/289 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S + +++F + + +LM +G +V KF E +++Q ++
Sbjct: 534 QHGSRFIQQKLETANSEVKERIFKELESNSLQLMQDVFGNYVIQKFFEHGDQTQKKILAS 593
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
K+ + + LA+ + V+K ++ V L+ S +K L K ++ T + G+
Sbjct: 594 KM--KGHVSALAN-QMYACRVVQKALEHV-----LVDQQASMVKELEKDVLKTVKDQNGN 645
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K ++ I ++ H LA + GC + ++ + +R+ I+ +
Sbjct: 646 HVIQKVIDRVPMEHIQVIVESFRGHIGVLAVNSYGCRVIQRLLEKVPEPQRRFIMTELHA 705
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL----- 232
A L GNYV QHV+ P I + ++ S K S VV++ L
Sbjct: 706 RGADLITDSYGNYVTQHVIEHGLPEDRAKIVSLITAQFLTFSKHKFASNVVERCLVCSDD 765
Query: 233 --KYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
+ + +I + + +L + D YGNYVIQ L+ET+ +D +V
Sbjct: 766 EQRRELVNAFIAKNERGENNLLNLLKDGYGNYVIQ-KLLETLNRDDYNV 813
>gi|225560981|gb|EEH09262.1| pumilio domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 917
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 26/312 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + +LM+ +G +V K E N+SQ ++
Sbjct: 505 QHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 564
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 565 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 616
Query: 118 SVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
VI K +E PS + + FI A LA H GC + +++ R+ IL +
Sbjct: 617 HVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAILEEL 674
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+SL + GNYV+QHV+ + I + + S K S VV+K +++
Sbjct: 675 HACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFG 734
Query: 235 -QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ I+ +L + +L + D+YGNYVIQ L + +R + LV K++
Sbjct: 735 ADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLER----EALVKKIE 790
Query: 289 QHLAALRVMKYG 300
L L+ YG
Sbjct: 791 PQLTQLKKFSYG 802
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 129 NHKNDFIYQ--AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N KN+ Y+ H + + + G + + +++ + Q+ I N L
Sbjct: 482 NSKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDV 541
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 542 FGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 601
Query: 245 LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH-QRLVTKLQQHLAALRVMKYG 300
L N +L+ D+ GN+VIQ A+ SVH Q ++ + + L YG
Sbjct: 602 LEN--HVLKCVKDQNGNHVIQKAVERVP-----SVHIQFIINAFKGQVHRLAAHPYG 651
>gi|413942338|gb|AFW74987.1| hypothetical protein ZEAMMB73_090092 [Zea mays]
Length = 919
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 147/353 (41%), Gaps = 64/353 (18%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + D +F + LM+ +G +V KF E + +Q+ + ++
Sbjct: 549 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 608
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L S+ +G ++K I+VV L +++ L+ + + G+ VI K
Sbjct: 609 IGR---VLALSLQMYGCRVIQKAIEVVDLD--LQTKMVAELEGHVMRCVRDQNGNHVIQK 663
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNAAS 181
C+E H +FI + L+ H GC + +++ + +QI + I +
Sbjct: 664 CIECIPQHAIEFIVSTFYGQVVMLSTHPYGCRVIQRVLEHCDDPKTQQIMMDEILQSVCL 723
Query: 182 LSRHRSGNYVVQ------------------------------------------------ 193
L++ + GNYVVQ
Sbjct: 724 LAQDQYGNYVVQYCCLFHVAMCCAAVWNRKQQERCEYCCLSHVAMCCAAVWNRKQQERCE 783
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELLNS--- 248
HVL P AI L G V +S K S V++K L + N V ++ E+L S
Sbjct: 784 HVLEHGKPHERSAIIEKLIGQVVQMSQQKFASNVIEKCLAFGNPVERQVLIGEMLGSTSE 843
Query: 249 DQILQV-ASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ L+V D++ NYV+Q L Q R + ++T+++ HL L+ YG
Sbjct: 844 SEPLEVMMKDQFANYVVQKVLETCDDQQR----EMILTRIKTHLNTLKKYTYG 892
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 82/188 (43%), Gaps = 7/188 (3%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
GS I + LE + + D ++ + L L G + F ++ ++ K++ +
Sbjct: 549 GSRFIQQKLETASTEEKDMVFSEIMPQALTLMTDVFGNYVVQKFFEHGSTAQIKELAGQL 608
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-- 233
+LS G V+Q + + D L + L GH + + G+ V+QK ++
Sbjct: 609 IGRVLALSLQMYGCRVIQKAIEVVDLDLQTKMVAELEGHVMRCVRDQNGNHVIQKCIECI 668
Query: 234 YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
Q+A+ +IV Q++ +++ YG VIQ L D Q ++ ++ Q +
Sbjct: 669 PQHAIEFIVSTFYG--QVVMLSTHPYGCRVIQRVLEHC---DDPKTQQIMMDEILQSVCL 723
Query: 294 LRVMKYGS 301
L +YG+
Sbjct: 724 LAQDQYGN 731
>gi|410075265|ref|XP_003955215.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
gi|372461797|emb|CCF56080.1| hypothetical protein KAFR_0A06450 [Kazachstania africana CBS 2517]
Length = 493
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 137/307 (44%), Gaps = 46/307 (14%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQ L + +D ++ ++ L+ YG + K I S + ++ I Q
Sbjct: 176 LQSYLDKLNRHEIDVIYKIIEKDIIGLILNSYGNYFIQKLIISVSLENRVNLLKTIAGQ- 234
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
F + D G+ ++ L+ V + +++ K + + +I C +P
Sbjct: 235 --FNSIATDIHGTRVIQSLVDCV--------ETIQEQEQIIKLI-----DNDLIQFCHDP 279
Query: 127 SYNH-------KND-----FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ NH K D IYQ L++C+ ++ + GC + ID ++ ++
Sbjct: 280 NSNHIIQKILAKFDPEALIGIYQIMLQNCISISKDKFGCCIIQRCIDYGTSNQVATLIGH 339
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLED-----PFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
I NA SLS GNYV+Q+++ +E + D I L+G +S K S +++
Sbjct: 340 IVKNAESLSFDAYGNYVIQYIIKMEQNIYSCKYTFD-ILNNLKGKLTTISNHKFSSNIIE 398
Query: 230 KFLKYQNAVHYIVEELL---------NSDQILQVASDKYGNYVIQTALVETMRQDRLSVH 280
LK N I++E L NS +L +DKYGNYV+QTAL + RQ+ + ++
Sbjct: 399 LLLKNPNVADVIIKEFLSYGAKGNTFNSINVL--LNDKYGNYVLQTALASS-RQNNILLY 455
Query: 281 QRLVTKL 287
+LV K+
Sbjct: 456 NQLVNKI 462
>gi|332254530|ref|XP_003276382.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1 [Nomascus
leucogenys]
Length = 1222
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 136/317 (42%), Gaps = 32/317 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++ K+ +F + + LM +G +V KF E + E +LAL
Sbjct: 896 QHGSRFISXKMERATPAERQLVFNEILQAAYPLMVDVFGHYVIQKFFEFGSLEQKLAL-- 953
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 954 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 1003
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 1004 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 1063
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 1064 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 1123
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 1124 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH----- 1178
Query: 286 KLQQHLAALRVMKYGSN 302
K++ H+A LR YG +
Sbjct: 1179 KIRPHIATLRKYTYGKH 1195
>gi|403333004|gb|EJY65564.1| Pumilio domain-containing protein [Oxytricha trifallax]
Length = 1075
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 7/279 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS++LQ++++ +S I+ +S +LM YG + + SC+ Q I+
Sbjct: 709 QKGSRFLQKQVTKANSGIVAYFLNEISPHLCDLMIDNYGNYFCQSLLSSCSGEQRLSILR 768
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I + F+ D+ G+ +++ + ++V P + AL L G+ V+
Sbjct: 769 AIQPK---FIEICCDRKGTHTIQTMFELV-NLPEEEDFIRDALMGNVIRLSKDPQGTHVV 824
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNA 179
K + HK FIY+ + + LA + G + + K + + IL + NA
Sbjct: 825 QKVMASFPEHKRAFIYEEVFDQFIELAKNNNGLCVVKKLVQFTKNTDQAVILMKRLQENA 884
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + GNY V ++ +P + I LR LS K S V++K L+ +
Sbjct: 885 IDLVQDPFGNYAVTEIVVKWEPEVCRPIFEVLRSRISQLSSQKFSSNVIEKCLERADEQM 944
Query: 240 Y--IVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR 276
++ EL SD++ + ++YGNYV+Q AL ++ Q++
Sbjct: 945 RAGLIVELAYSDRLTSLIRNQYGNYVVQKALKLSLGQEK 983
>gi|405977786|gb|EKC42220.1| Pumilio-like protein 2 [Crassostrea gigas]
Length = 1012
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 18/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + + LM+ +G +V KF E + Q +
Sbjct: 685 QHGSRFIQQKLERASPQEKNVVFNEILAHAYSLMTDVFGNYVIQKFFEFGSNEQKQTLAQ 744
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + L ++ L + + G+ V+
Sbjct: 745 RLRGH---VLPLALQMYGCRVIQKALETIPSD--LQVEIVKELDGHVVKCVKDQNGNHVV 799
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L L+ H GC + +++ + IL +
Sbjct: 800 QKCIECVDPIHLQFIIDAFKGQVLALSTHPYGCRVIQRILEHCTKEQITPILEELHQTTE 859
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYVVQHVL I +RG + LS K S VV+K + Y +
Sbjct: 860 RLVQDQYGNYVVQHVLEHGSHDDKSKIVAEIRGKVLVLSQHKFASNVVEKCVSYSSRAEK 919
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
++EE+ Q A D++ NYV+Q + V +Q + +H K++ H+A
Sbjct: 920 AMLIEEVCALTDGPQSALYIMMKDQFANYVVQKMIDVAEPKQRNILMH-----KIRPHIA 974
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 975 TLRKYTYG 982
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+L H S + +F G+ VI K E N + + Q H L LA GC
Sbjct: 710 ILAHAYSLMTDVF--------GNYVIQKFFEFGSNEQKQTLAQRLRGHVLPLALQMYGCR 761
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH 214
+ ++ + + +I+ + + + ++GN+VVQ + DP + I A +G
Sbjct: 762 VIQKALETIPSDLQVEIVKELDGHVVKCVKDQNGNHVVQKCIECVDPIHLQFIIDAFKGQ 821
Query: 215 YVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETM 272
+ LS G V+Q+ L++ + + I+EEL + + L D+YGNYV+Q L
Sbjct: 822 VLALSTHPYGCRVIQRILEHCTKEQITPILEELHQTTERL--VQDQYGNYVVQHVLEHGS 879
Query: 273 RQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
D+ ++V +++ + L K+ SN
Sbjct: 880 HDDK----SKIVAEIRGKVLVLSQHKFASN 905
>gi|407037210|gb|EKE38557.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 438
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ +D++F ++ + ELM +G +V K +E + + L+
Sbjct: 129 QQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEHGTKKHVHLLFE 188
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q + L S+ +G ++K+I+V+ SP + + S +K + + G+ VI
Sbjct: 189 KL--QGNVVKL-SLHMYGCRVIQKIIEVL--SPEEVRIISSEIKSNVSTFIEDQNGNHVI 243
Query: 121 LKCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K + E N D IY A+E+ + H GC + I+ + K++ +
Sbjct: 244 QKFIDFASEIDLNFMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQNCVKRVTDKLV 299
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
LS ++ GNYV+QH++ I ++G + S+ K S VV+K ++
Sbjct: 300 EYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCE 359
Query: 237 AVHYI--VEELLNSD----QILQVASDKYGNYVIQTALVETM 272
I V EL NS+ QI ++ D Y NYVIQ L+E M
Sbjct: 360 TREQIILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 400
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM+ G+ VI K +E +++ + + L+ H GC + I+ + +
Sbjct: 161 LMIDLFGNYVIQKLVEHGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVR 220
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
I I N ++ ++GN+V+Q ++ ++ + + V+ S G V+Q
Sbjct: 221 IISSEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQ 280
Query: 230 KFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ + V +
Sbjct: 281 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRVEI----VNNI 334
Query: 288 QQHLAALRVMKYGSN 302
+ L + KY SN
Sbjct: 335 KGKLYEYSMKKYSSN 349
>gi|402083794|gb|EJT78812.1| hypothetical protein GGTG_03909 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 911
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 44/325 (13%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+++Q KL S +S D++F + +LM +G +V KF E N Q+ IL
Sbjct: 523 QQGSRFIQTKLESANSDEKDQVFREIEPNAVQLMKDLFGNYVIQKFFEHGN--QVHKKIL 580
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLL----YHVMSALKRLFKFLMMTK 114
++++ L S + V+K ++ +V Q L+ +H +S +M +
Sbjct: 581 AGQMKNRMVDL-STQMYACRVVQKALEHVLVEQQAELVKELEHHTLS--------IMQNQ 631
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI K +E FIY+A H L+ GC + ++ +G+ ++ +
Sbjct: 632 NGNHVIQKIVELLPRQHIGFIYEAVRGHLKELSTQTYGCRVVQRMLE--QGTEEDTVVMM 689
Query: 175 ISVNAA--SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ A+ +L + GNYVVQH++ P A+ V S K S +V+K +
Sbjct: 690 DEIYASMTALITDQYGNYVVQHIITNGSPADQRRTIDAVMAQVVQFSKHKYASNIVEKCI 749
Query: 233 KYQNAVHYIVEELLNSDQIL------------QVASDKYGNYVIQTALVETMRQDRLSVH 280
VH E+ +IL Q+ D+YGNYVIQ LV+T+++ +
Sbjct: 750 -----VHGTAEDRTKISEILIRTGADGINPIHQLMKDQYGNYVIQK-LVDTLQEPEKT-- 801
Query: 281 QRLVTKLQQHLAALRVMKYGSNKEI 305
V K++ +L+ K S ++I
Sbjct: 802 -NFVMKMKPQFNSLK--KNNSGRQI 823
>gi|228312515|pdb|3H3D|X Chain X, Drosophila Pumilio Rna Binding Domain (Puf Domain)
gi|228312516|pdb|3H3D|Y Chain Y, Drosophila Pumilio Rna Binding Domain (Puf Domain)
Length = 323
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 141/302 (46%), Gaps = 21/302 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 35 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 94
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L ++ +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 95 QVKGH---VLQLALQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 149
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 150 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 209
Query: 181 SLSRHRSGNYVVQHVLN---LED-PFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
L + + GNYV+QHVL ED LI+++ RG + LS K S VV+K + +
Sbjct: 210 QLIQDQYGNYVIQHVLEHGKQEDKSILINSV----RGKVLVLSQHKFASNVVEKCVTHAT 265
Query: 237 AVHY--IVEEL--LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ N + + + D+Y NYV+Q +++ +L ++L+TK+++++A
Sbjct: 266 RGERTGLIDEVCTFNDNALHVMMKDQYANYVVQ-KMIDVSEPTQL---KKLMTKIRKNMA 321
Query: 293 AL 294
AL
Sbjct: 322 AL 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 14/234 (5%)
Query: 73 SVDKFGSSSVK-KLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHK 131
S D+ GS ++ KL + A +++ S + LM G+ VI K E +
Sbjct: 32 SQDQHGSRFIQQKLERATAAEKQMVF---SEILAAAYSLMTDVFGNYVIQKFFEFGTPEQ 88
Query: 132 NDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYV 191
+ + H L LA GC + ++++ ++++I+H + + + ++GN+V
Sbjct: 89 KNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHV 148
Query: 192 VQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEEL-LNS 248
VQ + DP + I A +G LS G V+Q+ L++ A I++EL ++
Sbjct: 149 VQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHT 208
Query: 249 DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+Q++Q D+YGNYVIQ L E +Q+ S+ L+ ++ + L K+ SN
Sbjct: 209 EQLIQ---DQYGNYVIQHVL-EHGKQEDKSI---LINSVRGKVLVLSQHKFASN 255
>gi|348517672|ref|XP_003446357.1| PREDICTED: pumilio homolog 2 isoform 1 [Oreochromis niloticus]
Length = 1214
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 862 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 921
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 922 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVV 978
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI----- 175
KC+E FI A L+ H GC + +++ + IL +
Sbjct: 979 QKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSE 1038
Query: 176 -------------------SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+V+ +L + + GNYV+QHVL P I +RG +
Sbjct: 1039 QLGQKYQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVL 1098
Query: 217 DLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALV 269
LS K S VV+K + + + +++E+ + + D+Y NYV+Q +
Sbjct: 1099 VLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI- 1157
Query: 270 ETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
D QR ++ K++ H+A LR YG +
Sbjct: 1158 -----DMAEPAQRKIIMHKIRPHIATLRKYTYGKH 1187
>gi|325096471|gb|EGC49781.1| pumilio [Ajellomyces capsulatus H88]
Length = 876
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 140/312 (44%), Gaps = 26/312 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + +LM+ +G +V K E N+SQ ++
Sbjct: 464 QHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 523
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 524 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 575
Query: 118 SVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
VI K +E PS + + FI A LA H GC + +++ R+ +L +
Sbjct: 576 HVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAVLEEL 633
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+SL + GNYV+QHV+ + I + + S K S VV+K +++
Sbjct: 634 HACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFG 693
Query: 235 -QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ I+ +L + +L + D+YGNYVIQ L + +R + LV K++
Sbjct: 694 ADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVLGQLNGLER----EALVKKIE 749
Query: 289 QHLAALRVMKYG 300
L L+ YG
Sbjct: 750 PQLTQLKKFSYG 761
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 129 NHKNDFIYQ--AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N+KN+ Y+ H + + + G + + +++ + Q+ I N L
Sbjct: 441 NNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDV 500
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 501 FGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 560
Query: 245 LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH-QRLVTKLQQHLAALRVMKYG 300
L N +L+ D+ GN+VIQ A+ SVH Q ++ + + L YG
Sbjct: 561 LEN--HVLKCVKDQNGNHVIQKAVERVP-----SVHIQFIINAFKGQVHRLAAHPYG 610
>gi|285026404|ref|NP_001165518.1| pumilio 2 [Oryzias latipes]
gi|261872059|gb|ACY02863.1| pumilio 2 [Oryzias latipes]
Length = 1199
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 847 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSPDQKLALAT 906
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 907 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVIGDIVRELDGHVLKCVKDQNGNHVV 963
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI----- 175
KC+E FI A L+ H GC + +++ + IL +
Sbjct: 964 QKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSE 1023
Query: 176 -------------------SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+V+ +L + + GNYV+QHVL P I +RG +
Sbjct: 1024 QLGQKYQAVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVL 1083
Query: 217 DLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALV 269
LS K S VV+K + + + +++E+ + + D+Y NYV+Q +
Sbjct: 1084 ALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI- 1142
Query: 270 ETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
D QR ++ K++ H+A LR YG +
Sbjct: 1143 -----DMAEPAQRKIIMHKIRPHIATLRKYTYGKH 1172
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 10/163 (6%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + R+ + I A L GNYV+Q P
Sbjct: 839 HMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSP 898
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
A+ +RGH + L+L G V+QK L+ Q + IV EL +L+ D
Sbjct: 899 DQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVIGDIVREL--DGHVLKCVKD 956
Query: 258 KYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
+ GN+V+Q +E ++ L Q ++ Q + L YG
Sbjct: 957 QNGNHVVQKC-IECVQPQAL---QFIIDAFQGQVFVLSTHPYG 995
>gi|410916791|ref|XP_003971870.1| PREDICTED: pumilio homolog 2-like [Takifugu rubripes]
Length = 1201
Score = 68.9 bits (167), Expect = 3e-09, Method: Composition-based stats.
Identities = 72/335 (21%), Positives = 140/335 (41%), Gaps = 42/335 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 849 QHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQKFFEFGSADQKLALAT 908
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I + + LA + +G ++K ++ ++ ++ ++ L + + G+ V+
Sbjct: 909 RI--RGHVLPLA-LQMYGCRVIQKALESISSDQQVISDIVRELDGHVLKCVKDQNGNHVV 965
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI----- 175
KC+E FI A L+ H GC + +++ + IL +
Sbjct: 966 QKCIECVQPQALQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTQEQTLPILEELHQHSE 1025
Query: 176 -------------------SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYV 216
+V+ +L + + GNYV+QHVL P I +RG +
Sbjct: 1026 QLGQKFQGVSLEMTPKTYYTVSRDALFKDQYGNYVIQHVLEHGRPEDKSKIVAEVRGKVL 1085
Query: 217 DLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALV 269
LS K S VV+K + + + +++E+ + + D+Y NYV+Q +
Sbjct: 1086 VLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMKDQYANYVVQRMI- 1144
Query: 270 ETMRQDRLSVHQR--LVTKLQQHLAALRVMKYGSN 302
D QR ++ K++ H+A LR YG +
Sbjct: 1145 -----DMAEPAQRKIIMHKIRPHIATLRKYTYGKH 1174
>gi|384245702|gb|EIE19195.1| ARM repeat-containing protein [Coccomyxa subellipsoidea C-169]
Length = 945
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 48/308 (15%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVV---SGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
GS+++Q K+ + + F V +LM+ +G +V KF++ ++ Q +
Sbjct: 494 GSRFIQMKIETASPEEVAAAFTEVCVNKDPALQLMNDVFGNYVVQKFLDFGDDDQKE--V 551
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ Q + L S+ +G ++K I+V+ PPL +++ LK + + G+ V
Sbjct: 552 MAALIQGHVKTL-SLQVYGCRVIQKAIEVL--RPPLKDSIVAELKGHVIECISDQNGNHV 608
Query: 120 ILKCLE---PSYNHKNDFIYQ--------AALEHC---------------LYLACHEQGC 153
I KC+E PS D + + AA + + LA H GC
Sbjct: 609 IQKCIECITPS-EPIADLLEELADGPEGAAAAQRSRAPLPPGKPALSAGFVPLARHPYGC 667
Query: 154 INLNNFIDNMKGSRRK-QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALR 212
+ ++ K +++ ++ NA L+R GNYV+QH L P I L+
Sbjct: 668 RVVQRILEKCTLEDYKHRLVATVTENALDLARDTYGNYVIQHSLAFGSPEEKVEIIQRLQ 727
Query: 213 GHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELL---------NSDQILQ-VASDKYG 260
H V+LS K S VV+K L++ ++ +V +L +DQ+LQ + D+YG
Sbjct: 728 AHIVELSTHKFASNVVEKCLEFGTRDQRRRLVSTMLGEGSGLDSAGADQLLQTMTKDQYG 787
Query: 261 NYVIQTAL 268
NYV+Q L
Sbjct: 788 NYVVQKTL 795
Score = 45.1 bits (105), Expect = 0.037, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 9/96 (9%)
Query: 210 ALRGHYVDLSLTKCGSFVVQKFLK---YQNAVHYIVEELLNSDQILQVASDKYGNYVIQT 266
AL +V L+ G VVQ+ L+ ++ H +V + ++ L +A D YGNYVIQ
Sbjct: 652 ALSAGFVPLARHPYGCRVVQRILEKCTLEDYKHRLVATV--TENALDLARDTYGNYVIQH 709
Query: 267 ALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+L ++++ + QR LQ H+ L K+ SN
Sbjct: 710 SLAFGSPEEKVEIIQR----LQAHIVELSTHKFASN 741
>gi|290973641|ref|XP_002669556.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
gi|284083105|gb|EFC36812.1| Pumilio/Puf RNA-binding protein [Naegleria gruberi]
Length = 788
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 19/310 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + + LM+ +G +V KF E N Q L
Sbjct: 473 QHGSRFIQQKLEKASNSEKELIFKEIQPYALSLMTDVFGNYVIQKFFEFGNAPQKKK--L 530
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + L ++ +G ++K ++V+ V+S LK + + G+ VI
Sbjct: 531 SKELQGNVLNL-TLQTYGCRVIQKALEVIDND--DKDTVVSELKGNVMRCVQDQNGNHVI 587
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A H GC + +++ + IL I N
Sbjct: 588 QKCIERVPPKIIQFIVDGFKGKVYEQAIHNYGCRVIQRILEHCTEGQTVPILQEILDNIL 647
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--- 237
+L GNYVVQHVL+ P I AL +LS+ K S V++K + N
Sbjct: 648 ALVVDPYGNYVVQHVLDRGKPTFKSLIIAALSKKIQELSINKFASNVIEKCFQQANKKER 707
Query: 238 -------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ I ++ + + D++ NYVIQ ++ET S + + ++ H
Sbjct: 708 DNMITELIGDITSRDISETPLFAMMKDQFANYVIQ-KIIETC---DASQRKTITEAVKPH 763
Query: 291 LAALRVMKYG 300
++ + YG
Sbjct: 764 QEKIKKLPYG 773
>gi|255945903|ref|XP_002563719.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588454|emb|CAP86563.1| Pc20g12340 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 906
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 146/310 (47%), Gaps = 22/310 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V K E N++Q ++
Sbjct: 502 QHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 561
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S +G V+K ++ + L + +K L ++ + G+
Sbjct: 562 QMRGH---VLALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELENHVLKCVRDQNGN 613
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 614 HVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQSILAELHA 673
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--Q 235
++L + GNYV+QHV+ D + + G + S K S VV+K +++ +
Sbjct: 674 CTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEFGAE 733
Query: 236 NAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
+ ++I+ L +++ +L + D+YGNYVIQ L + +R + L+ +++
Sbjct: 734 HERNHIISTLTSTNDRGESPLLGLMRDQYGNYVIQKVLGQLKDAER----EALIEQIKPL 789
Query: 291 LAALRVMKYG 300
L+ L+ YG
Sbjct: 790 LSQLKKFSYG 799
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N L GNYVVQ + +
Sbjct: 494 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 553
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ +RGH + LS G VVQK L++ Q A +V+EL N +L+ D
Sbjct: 554 TQKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAA--MVKELEN--HVLKCVRD 609
Query: 258 KYGNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
+ GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 610 QNGNHVIQKAIERVPSQYVQFIINAFRGQVNRLAAHPYGCRVIQRMLEH 658
>gi|393220554|gb|EJD06040.1| ARM repeat-containing protein [Fomitiporia mediterranea MF3/22]
Length = 486
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 144/309 (46%), Gaps = 30/309 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL + S +F +V G +L+ +G +V K E + +Q+ I
Sbjct: 146 QHGSRFIQQKLETATSDEKQIVFDEIVPGAALQLIQDVFGNYVIQKLFE--HGTQVQKTI 203
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPG 116
L + + L S+ +G V+K I+ V L S +K L ++ G
Sbjct: 204 LANAMEGHILAL-SLQMYGCRVVQKAIEFV-----LPEQQASFVKELEGHVLRCVKDANG 257
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
+ VI K LE + F+ QA + L+ H GC L ++MK + + +L +
Sbjct: 258 NHVIQKLLERVSPERLGFV-QAFKGNVYELSTHPYGCRVLQRVFEHMKEEQTRPLLDELH 316
Query: 177 VNAASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+L + + GNYVVQ VL ++D L I LRG + ++ K S V +K L
Sbjct: 317 KYTINLMQDQFGNYVVQFVLEHGPVQDRLL---IISKLRGQMLQMAKHKFASNVCEKALV 373
Query: 234 YQNAVH--YIVEELLNS-----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
++ + +VEE++ I+ + D+Y NYV+Q AL + D+ V ++K
Sbjct: 374 MADSENRRLLVEEMITPKADGVSPIVTMMKDQYANYVLQRALT-VVEGDQKEV---FISK 429
Query: 287 LQQHLAALR 295
++ LA +R
Sbjct: 430 VRPQLATMR 438
>gi|170063110|ref|XP_001866961.1| pumilio [Culex quinquefasciatus]
gi|167880847|gb|EDS44230.1| pumilio [Culex quinquefasciatus]
Length = 852
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 15/305 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + G + LM+ +G +V KF E + Q +
Sbjct: 456 QHGSRFIQQKLERATAAEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPEQKQALAQ 515
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + ++ L + + G+ V+
Sbjct: 516 QV--KGHVLPLA-LQMYGCRVIQKALESIPAE--QQQEIVRELDGHVLKCVKDQNGNHVV 570
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + N
Sbjct: 571 QKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTQEQTAPILGELHANTE 630
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + + GNYV+QHVL P + A+RG + LS K S VV+K + +
Sbjct: 631 QLIQDQYGNYVIQHVLEHGKPEDKSVLIAAVRGKVLILSQHKFASNVVEKCVTHATRAER 690
Query: 241 --IVEELLN-SDQILQV-ASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAALR 295
++EE+ + +D L V D+Y NYV+Q + V Q ++ +H K++ H+ +L+
Sbjct: 691 ALLIEEVCSFNDAGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLH-----KIRPHMNSLK 745
Query: 296 VMKYG 300
YG
Sbjct: 746 KYTYG 750
>gi|392566810|gb|EIW59985.1| ARM repeat-containing protein [Trametes versicolor FP-101664 SS1]
Length = 378
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 141/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL S S ++ +F +V + +LM +G +V K E +Q A ++
Sbjct: 33 QHGSRFIQQKLESATSEEMEIIFDEIVPQYAIQLMQDVFGNYVVQKMFEYGTSAQKARLV 92
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
T + Q+ L S+ +G V+K I+ + +L+ + L + G+ V
Sbjct: 93 --ATMEGQILGL-SLQMYGCRVVQKAIEHILPEQQVLF--VQELGPNVLRCVKDANGNHV 147
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
I K +E + F+ A +Y L+ H GC L + M + + +L +
Sbjct: 148 IQKLIEHVAPDRLAFV--TAFRGSVYDLSTHPYGCRVLQRCFEYMPEDQTRPLLDELHKY 205
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KYQN 236
+L + GNYVVQ VL P I L G +++ K S V +K L
Sbjct: 206 VPNLMIDQFGNYVVQFVLEHGRPQDRAMIISKLTGQMYNMAKHKFASNVCEKALVCADPE 265
Query: 237 AVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQH 290
+ +++E++ Q I+ + D +GNYV+Q AL V Q L L++K++ H
Sbjct: 266 SRRQLIDEIMTPKQDGLSPIMGLMKDSFGNYVLQRALTVADADQKEL-----LISKVRPH 320
Query: 291 LAALRVMKYGS 301
L +R +Y S
Sbjct: 321 LVNMR--RYSS 329
>gi|167382459|ref|XP_001736113.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165901552|gb|EDR27630.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 133/284 (46%), Gaps = 25/284 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G LQ+ L + +F + EL++ G+++ K +E +E
Sbjct: 135 GCSLLQKLLDGASKESVFLIFKEIEDSLEELITHPNGQYILPKIVEFGSEE--------- 185
Query: 63 TFQDQLFLLASVD-------KFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
+D +F + S + +FG +V+K+ + + + S + R +++ P
Sbjct: 186 -IKDNVFGVVSENLVKYCCHQFGGYTVQKIAPFMRER---HIQIWSPILRNNIAILIIDP 241
Query: 116 GSSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
++ +++ L +N KN DF Y+ + + ++ + GC L + +DN + I
Sbjct: 242 HANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTNQQINSIKPQ 301
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK- 233
+ N L + + GN+++QH++ DP +I I ++ + V S K S VV+K LK
Sbjct: 302 LLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNVVEKCLKC 360
Query: 234 -YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR 276
+N +++ L + ++ + D+YGN+VIQ A ++ + ++R
Sbjct: 361 STENVRQPLLDVLSQPESLVALVEDQYGNFVIQ-AFLDVLPENR 403
>gi|425773915|gb|EKV12240.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
PHI26]
gi|425782417|gb|EKV20327.1| mRNA binding protein Pumilio 2, putative [Penicillium digitatum
Pd1]
Length = 904
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 144/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V K E N++Q ++
Sbjct: 500 QHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 559
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S +G V+K ++ + L + +K L ++ + G+
Sbjct: 560 QMRGH---VLALSTQMYGCRVVQKALEHI-----LTDQQAAMVKELENHVLKCVRDQNGN 611
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 612 HVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQRMLEHCEEVDRQSILAELHA 671
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
++L + GNYV+QHV+ D + + G + S K S VV+K +++ A
Sbjct: 672 CTSNLIPDQFGNYVIQHVIENGDEKDRTRMIDIVMGQLLAYSKHKFASNVVEKSIEF-GA 730
Query: 238 VH---YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
H +I+ L +++ +L + D+YGNYVIQ L + +R + L+ +++
Sbjct: 731 EHERIHIISTLTSANDRGESPLLGLMRDQYGNYVIQKVLGQLKHVER----EALIDQIKP 786
Query: 290 HLAALRVMKYG 300
L L+ YG
Sbjct: 787 LLGQLKKFSYG 797
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 24/169 (14%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N L GNYVVQ + +
Sbjct: 492 HVVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 551
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ +RGH + LS G VVQK L++ Q A +V+EL N +L+ D
Sbjct: 552 TQKKILANQMRGHVLALSTQMYGCRVVQKALEHILTDQQAA--MVKELEN--HVLKCVRD 607
Query: 258 KYGNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
+ GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 608 QNGNHVIQKAIERVPSQHVQFIINAFRGQVNRLAAHPYGCRVIQRMLEH 656
>gi|355714563|gb|AES05045.1| pumilio-like protein 2 [Mustela putorius furo]
Length = 600
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 274 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 333
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ ++ L HV+ +K +
Sbjct: 334 RIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 382
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 383 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 442
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 443 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 502
Query: 235 QNAVHY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 503 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 556
Query: 286 KLQQHLAALRVMKYG 300
K++ H+ LR YG
Sbjct: 557 KIRPHITTLRKYTYG 571
>gi|295666323|ref|XP_002793712.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278006|gb|EEH33572.1| mRNA binding protein Pumilio 2 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 947
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 142/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + + +LM+ +G +V K E N+SQ ++
Sbjct: 543 QHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDVFGNYVVQKLFEHGNQSQKRILAN 602
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 603 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 654
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E FI A LA H GC + +++ R+ IL +
Sbjct: 655 HVIQKAVERVPTVHIQFIINAFKGQVHRLAAHPYGCRVIQRMLEHCNEGDRQAILAELHS 714
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+A L + GNYV+QH+L N E+ + I + V S K S VV+K +++
Sbjct: 715 CSAGLIPDQFGNYVIQHILENGEEHDKVKIISIVISQLLV-FSKHKFASNVVEKSIEFGA 773
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I++ L + +L + D+YGNYVIQ L + +R + LV++++
Sbjct: 774 EDQRKEILQLLTTPNDRGENPLLGLMRDQYGNYVIQKVLGQLKGSER----ENLVSQIEP 829
Query: 290 HLAALRVMKYG 300
L L+ YG
Sbjct: 830 QLIHLKKFSYG 840
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 129 NHKNDFIYQAA--LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N+KN+ Y+ H + + + G + + +++ + Q+ I +N+ L
Sbjct: 520 NNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQLNSLQLMTDV 579
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 580 FGNYVVQKLFEHGNQSQKRILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 639
Query: 245 LLNSDQILQVASDKYGNYVIQTAL 268
L N +L+ D+ GN+VIQ A+
Sbjct: 640 LEN--HVLKCVKDQNGNHVIQKAV 661
>gi|357492315|ref|XP_003616446.1| Pumilio-like protein [Medicago truncatula]
gi|355517781|gb|AES99404.1| Pumilio-like protein [Medicago truncatula]
Length = 1066
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 150/336 (44%), Gaps = 45/336 (13%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + +F + LM+ +G +V KF E Q+ + ++
Sbjct: 707 GSRFIQQKLETASMEEKTMVFNEIMPKALTLMTDVFGNYVVQKFFEHGTAEQIRELADQL 766
Query: 63 TFQDQLFLLASVDKFGSSSVKKL---------IKVVAQS---PPLL----YHVMSALKRL 106
T L S+ +G ++K +VV + P LL ++++ A++ +
Sbjct: 767 TGH---VLTLSLQMYGCRVIQKQSHYAKGARKYEVVGRPDGFPRLLIFFSFYIVQAIEVV 823
Query: 107 F---KFLMMT------------KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
K M+T + G+ VI KC+E + FI + + L+ H
Sbjct: 824 NLDQKTKMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDEIKFIVSTFYDQVVTLSTHPY 883
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAAS-LSRHRSGNYVVQHVLNLEDPFLIDAICFA 210
GC + ++ + +QI+ + S L++ + GNYVVQHVL P AI
Sbjct: 884 GCRVIQRVLEYCHDPKTQQIMMDEILQCVSMLAQDQYGNYVVQHVLEHGKPHERTAIIKE 943
Query: 211 LRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEELLNS---DQILQV-ASDKYGNYVI 264
G V +S K S V++K L + +V E++ S ++ LQV D++ NYV+
Sbjct: 944 FTGQIVQMSQQKFASNVIEKCLSFGTPTERQVLVNEMIGSTDDNEPLQVMMKDQFANYVV 1003
Query: 265 QTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
Q L ET +L + ++ +++ HL AL+ YG
Sbjct: 1004 QKVL-ETCDDQQLEL---ILNRIKVHLNALKKYTYG 1035
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE 243
R ++GN+V+Q + I I V LS G V+Q+ L+Y H
Sbjct: 844 RDQNGNHVIQKCIECVPEDEIKFIVSTFYDQVVTLSTHPYGCRVIQRVLEY---CHDPKT 900
Query: 244 ELLNSDQILQ----VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKY 299
+ + D+ILQ +A D+YGNYV+Q L +R ++ + ++ Q + K+
Sbjct: 901 QQIMMDEILQCVSMLAQDQYGNYVVQHVLEHGKPHERTAIIKEFTGQIVQ----MSQQKF 956
Query: 300 GSN 302
SN
Sbjct: 957 ASN 959
>gi|178847547|pdb|3BSB|A Chain A, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847548|pdb|3BSB|B Chain B, Crystal Structure Of Human Pumilio1 In Complex With
Cyclinb Reverse Rna
gi|178847550|pdb|3BSX|A Chain A, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
gi|178847551|pdb|3BSX|B Chain B, Crystal Structure Of Human Pumilio 1 In Complex With Puf5
Rna
Length = 343
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 30/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 33 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 92
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ + L HV+ +K +
Sbjct: 93 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------DQ 141
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 142 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE 201
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K + +
Sbjct: 202 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTH 261
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ +++E+ + + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 262 ASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----K 316
Query: 287 LQQHLAALRVMKYGSN 302
++ H+A LR YG +
Sbjct: 317 IRPHIATLRKYTYGKH 332
>gi|146412760|ref|XP_001482351.1| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 23/304 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + ++ELM+ +G +V K+ E N +Q ++LK
Sbjct: 432 GSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ-KQVLLKF 490
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
++ L S+ +G V++ ++ V +L ++ L+ + G+ VI K
Sbjct: 491 MI-GHIYEL-SLQMYGCRVVQRALEAVDLKGQIL--IIDELRDHILVCAKDQNGNHVIQK 546
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
+E + FI + + +L+ H GC + ++ R++++L ++ L
Sbjct: 547 SIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLDELNRFIFYL 606
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--Y 240
+ + GNYV+QH+L +AI + G V+ S K S V++K +K+
Sbjct: 607 IQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIKFGTVKQKRR 666
Query: 241 IVEELL--NSDQILQVASDK----------YGNYVIQTALVETMRQDRLSVHQR-LVTKL 287
I++E++ N D ++ SD+ Y NYVIQ LVE D +R LV KL
Sbjct: 667 ILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-LVEGF--DAKGEEKRMLVMKL 723
Query: 288 QQHL 291
+Q+L
Sbjct: 724 RQYL 727
>gi|14277944|pdb|1IB2|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|23200484|pdb|1M8Z|A Chain A, Crystal Structure Of A Pumilio-Homology Domain
gi|24159005|pdb|1M8W|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159006|pdb|1M8W|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-19 Rna
gi|24159011|pdb|1M8X|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159012|pdb|1M8X|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre1-14 Rna
gi|24159015|pdb|1M8Y|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|24159016|pdb|1M8Y|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Nre2-10 Rna
gi|326327989|pdb|3Q0L|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327990|pdb|3Q0L|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nrea
gi|326327993|pdb|3Q0M|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327994|pdb|3Q0M|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With P38alpha Nreb
gi|326327997|pdb|3Q0N|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326327998|pdb|3Q0N|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328001|pdb|3Q0O|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328002|pdb|3Q0O|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Erk2 Nre
gi|326328005|pdb|3Q0P|A Chain A, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
gi|326328006|pdb|3Q0P|B Chain B, Crystal Structure Of The Pumilio-Homology Domain From
Human Pumilio1 In Complex With Hunchback Nre
Length = 349
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 30/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 33 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 92
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ + L HV+ +K +
Sbjct: 93 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------DQ 141
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 142 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE 201
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K + +
Sbjct: 202 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTH 261
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ +++E+ + + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 262 ASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----K 316
Query: 287 LQQHLAALRVMKYGSN 302
++ H+A LR YG +
Sbjct: 317 IRPHIATLRKYTYGKH 332
>gi|67474034|ref|XP_652766.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56469651|gb|EAL47380.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702370|gb|EMD43022.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 438
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ +D++F ++ + ELM +G +V K +E + + L+
Sbjct: 129 QQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLVEYGTKKHVHLLFE 188
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q + L S+ +G ++K+I+V+ SP + + S +K + + G+ VI
Sbjct: 189 KL--QGNVVKL-SLHMYGCRVIQKIIEVL--SPEEVRIISSEIKSNVSTFIEDQNGNHVI 243
Query: 121 LKCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K + E N D IY A+E+ + H GC + I+ + K++ +
Sbjct: 244 QKFIDFASEIDLNFMIDEIYTRAVEY----SKHPYGCRVIQRLIEKNSQNCVKRVTDKLV 299
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--Y 234
LS ++ GNYV+QH++ I ++G + S+ K S VV+K ++
Sbjct: 300 EYVWELSINQYGNYVIQHLIQYGTNEQRVEIVNNIKGKLYEYSMKKYSSNVVEKCIRCCE 359
Query: 235 QNAVHYIVEELLNSD----QILQVASDKYGNYVIQTALVETM 272
+V EL NS+ QI ++ D Y NYVIQ L+E M
Sbjct: 360 TREQTILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 400
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM+ G+ VI K +E +++ + + L+ H GC + I+ + +
Sbjct: 161 LMIDLFGNYVIQKLVEYGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKIIEVLSPEEVR 220
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
I I N ++ ++GN+V+Q ++ ++ + + V+ S G V+Q
Sbjct: 221 IISSEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTRAVEYSKHPYGCRVIQ 280
Query: 230 KFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ + V +
Sbjct: 281 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRVEI----VNNI 334
Query: 288 QQHLAALRVMKYGSN 302
+ L + KY SN
Sbjct: 335 KGKLYEYSMKKYSSN 349
>gi|12082247|dbj|BAB20864.1| pumilio [Xenopus laevis]
Length = 576
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q+KL +F + ++LM G +V KF E + E +LAL
Sbjct: 248 QHGSRFIQQKLERASPAERQLVFNEILQAAYQLMVDVIGNYVIQKFFEFGSLEQKLAL-- 305
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 306 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 363
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 364 VQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 423
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 424 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 483
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 484 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 538
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 539 ATLRKYTYG 547
>gi|392577052|gb|EIW70182.1| hypothetical protein TREMEDRAFT_29689 [Tremella mesenterica DSM
1558]
Length = 337
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 125/278 (44%), Gaps = 21/278 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + ++ + ++LM+ +G +V K E C++++ A +
Sbjct: 57 QHGSRFIQQKLENATEAERRQILEELEPNVYQLMTDVFGNYVIQKLFEVCDQTEKAGLAK 116
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
K+ L S+ +G V+K ++ V L H + +K ++
Sbjct: 117 KMEGH---VLQLSMQMYGCRVVQKALEYVLTEQRDVLVEELRPHTLECVKSSNANHVIHL 173
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ L L+P DF+ +A + H L L H GC L +N+ R + ++
Sbjct: 174 RLTIERLITLDPP-----DFVTKAFVGHVLELGTHPYGCRVLQKTFENLPVERTRALIDE 228
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ ++ + + GNYVVQ +++ P + L ++S K S VV+K L +
Sbjct: 229 MHLHTVKFTMDQFGNYVVQSIIDKGIPEDRHKVIDKLLPQIQEMSRHKFASNVVEKALNH 288
Query: 235 --QNAVHYIVEELL-----NSDQILQVASDKYGNYVIQ 265
+N I++E++ ++QI + D +GN+ +Q
Sbjct: 289 ADENDRTAIIDEIIGPKPDGTNQIPSLLRDAFGNFAVQ 326
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 160 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLS 219
++N + R+QIL + N L GNYV+Q + + D + + GH + LS
Sbjct: 67 LENATEAERRQILEELEPNVYQLMTDVFGNYVIQKLFEVCDQTEKAGLAKKMEGHVLQLS 126
Query: 220 LTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALV 269
+ G VVQK L+Y +VEEL L+ N+VI L
Sbjct: 127 MQMYGCRVVQKALEYVLTEQRDVLVEEL--RPHTLECVKSSNANHVIHLRLT 176
>gi|414869529|tpg|DAA48086.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 238
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 172
+ G+ VI KC+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I L++ + GNYV QHVL I L G V +S K S V++K
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 233 KYQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
++ + + IVE+ ++ +L + D+Y NYV+Q L ET +D+ + L+++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLSR 199
Query: 287 LQQHLAALRVMKYG 300
++ H+ ALR YG
Sbjct: 200 VKDHMQALRKYTYG 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 223 CGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
G V+Q+ L++ + I++E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 280 HQR--LVTKLQQHLAALRVMKYGSN 302
H+R ++TKL + + KY SN
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASN 137
>gi|350585831|ref|XP_003482060.1| PREDICTED: pumilio homolog 1 isoform 2 [Sus scrofa]
Length = 594
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 266 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 323
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 324 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 381
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 382 VQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 441
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 442 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 501
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 502 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 556
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 557 ATLRKYTYG 565
>gi|190348753|gb|EDK41273.2| hypothetical protein PGUG_05371 [Meyerozyma guilliermondii ATCC
6260]
Length = 761
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 148/307 (48%), Gaps = 29/307 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + + + +F + ++ELM+ +G +V K+ E N +Q ++LK
Sbjct: 432 GSRFIQQKLPTASNEEKEVIFNEIRETSYELMTDVFGNYVIQKYFEYGNNTQ-KQVLLKF 490
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGSSV 119
++ L S+ +G V++ ++ V L +S + L +++ + G+ V
Sbjct: 491 MI-GHIYEL-SLQMYGCRVVQRALEAVD-----LKGQISIIDELRDHILVCAKDQNGNHV 543
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
I K +E + FI + + +L+ H GC + ++ R++++L ++
Sbjct: 544 IQKSIEKIPFSEITFIMDSLEDQIYHLSTHPYGCRVIQRLLEYADPKRQQEMLDELNRFI 603
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QH+L +AI + G V+ S K S V++K +K+
Sbjct: 604 FYLIQDQYGNYVMQHILERGSSKDREAILEVVLGSVVNFSKHKFASNVIEKCIKFGTVKQ 663
Query: 240 --YIVEELL--NSDQILQVASDK----------YGNYVIQTALVETMRQDRLSVHQR-LV 284
I++E++ N D ++ SD+ Y NYVIQ LVE D +R LV
Sbjct: 664 KRRILDEVMLGNEDPTVETVSDESPLALMMKDQYANYVIQK-LVEGF--DAKGEEKRMLV 720
Query: 285 TKLQQHL 291
KL+Q+L
Sbjct: 721 MKLRQYL 727
>gi|194688530|gb|ACF78349.1| unknown [Zea mays]
gi|414869528|tpg|DAA48085.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 233
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 172
+ G+ VI KC+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I L++ + GNYV QHVL I L G V +S K S V++K
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 233 KYQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
++ + + IVE+ ++ +L + D+Y NYV+Q L ET +D+ + L+++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVQKIL-ETCNEDQREL---LLSR 199
Query: 287 LQQHLAALRVMKYG 300
++ H+ ALR YG
Sbjct: 200 VKDHMQALRKYTYG 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 223 CGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
G V+Q+ L++ + I++E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 280 HQR--LVTKLQQHLAALRVMKYGSN 302
H+R ++TKL + + KY SN
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASN 137
>gi|344305475|gb|EGW35707.1| hypothetical protein SPAPADRAFT_58907 [Spathaspora passalidarum
NRRL Y-27907]
Length = 546
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 145/309 (46%), Gaps = 26/309 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL+S +F + +++LM+ +G +V K+ E + Q ++ K+
Sbjct: 220 GSRFIQQKLNSSSDEEKATVFNEIKDISYDLMTDVFGNYVIQKYFEYGLKDQKEFLLTKM 279
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ ++ L S+ +G V++ ++ + S P ++ LK + G+ VI K
Sbjct: 280 --KGHIYEL-SLQMYGCRVVQRALESL--SLPGQLAIIDELKDYILICAKDQNGNHVIQK 334
Query: 123 CLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+E P K FI + + L+ H GC + ++ +K IL ++
Sbjct: 335 SIEMIKPF--DKIRFILTSLSDQIYQLSIHPYGCRVIQRLLEFSNLDDQKDILEQLNRYI 392
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QH+L + + I + G V S K S V++K +K+ +
Sbjct: 393 FYLIQDQYGNYVIQHILEHGNENERNEILKVVTGSVVTFSKHKFASNVIEKCIKFGSTAQ 452
Query: 240 --YIVEELL--NSDQILQVAS----------DKYGNYVIQTALVETMRQDRLSVHQRLVT 285
I++E++ N D +++ S D+Y NYVIQ LVE + +RLV
Sbjct: 453 KRKILDEVMIGNEDFSMELVSDDSSLALMMKDQYANYVIQ-KLVEGF-DSKSPEKKRLVL 510
Query: 286 KLQQHLAAL 294
KL+Q+L +
Sbjct: 511 KLRQYLKQI 519
>gi|58263134|ref|XP_568977.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263136|ref|XP_568978.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|58263138|ref|XP_568979.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223627|gb|AAW41670.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223628|gb|AAW41671.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57223629|gb|AAW41672.1| hypothetical protein CNB04870 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 673
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 127/289 (43%), Gaps = 43/289 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + KLF + ++LM+ +G +V K E ++ Q A +
Sbjct: 305 QHGSRFIQQKLETATPEDRQKLFDEIYTNAYQLMTDVFGNYVTQKMFEHGDQLQKAALAK 364
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI---------KVVAQSPPLLYHVMSALK-----RL 106
K+ D L S+ +G V+K + K+VA+ L H++ +K +
Sbjct: 365 KM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAE---LEPHILECVKSSNANHV 418
Query: 107 FKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 166
+ ++ T P S+ + FI H LA H GC L +N+
Sbjct: 419 VQRIINTGPPQSI-----------PDSFI-----GHVEELAKHPYGCRVLQKTFENLDDK 462
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
++ +L + L+ + GNYV+Q V+ + P + + L+G + K S
Sbjct: 463 MKRSLLDEMHKCVIPLTEDQFGNYVIQSVITVGKPEDRNKVISQLKGRVTTFARHKFASN 522
Query: 227 VVQKFLKYQNAV--HYIVEELL-----NSDQILQVASDKYGNYVIQTAL 268
VV+K L + + +++EL+ ++Q+ + D Y N+ +QT +
Sbjct: 523 VVEKALIHADPADRRVLIDELIGMQPDGTNQVGMLLRDAYANFPLQTGM 571
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
L L+ GC + +D++ +R +I+ + + + + N+VVQ ++N P
Sbjct: 370 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRIINTGPP- 428
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ--ILQVASDKYG 260
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 429 --QSIPDSFIGHVEELAKHPYGCRVLQK--TFENLDDKMKRSLLDEMHKCVIPLTEDQFG 484
Query: 261 NYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
NYVIQ+ + +DR +++++L+ + K+ SN
Sbjct: 485 NYVIQSVITVGKPEDR----NKVISQLKGRVTTFARHKFASN 522
>gi|47216145|emb|CAG10019.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1287
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 82/359 (22%), Positives = 149/359 (41%), Gaps = 62/359 (17%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALI- 58
+ GS+++Q KL S +F + ++LM +G +V KF E + + +LAL
Sbjct: 907 QHGSRFIQLKLERASSAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAE 966
Query: 59 -----ILKITFQ-----------------DQLFLLASVDKFG-----SSSVKKLIKVV-- 89
+L + Q Q+ + FG ++V++ + +V
Sbjct: 967 RIRGHVLSLALQMYGCRVIQKALEFIPSDQQVIVTGLAGGFGLFRLKGAAVQRRLWIVGP 1026
Query: 90 ------AQSPPLLYHVMSALKRLFKFLMM------------TKPGSSVILKCLEPSYNHK 131
A L VMSAL + + M+ + G+ V+ KC+E H
Sbjct: 1027 GAVVEEAFKQGLDTDVMSALSPVLQSEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHA 1086
Query: 132 NDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYV 191
FI A L+ H GC + +++ + IL + + L + + GNYV
Sbjct: 1087 LHFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYV 1146
Query: 192 VQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSD 249
+QHVL I +RG+ + LS K S VV+K + + + +++E+ +
Sbjct: 1147 IQHVLEHGRAEDKSKIVAEIRGNVLGLSQHKFASNVVEKCVTHASRAERAVLIDEVCSLT 1206
Query: 250 Q-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
+ + + D+Y NYV+Q + V Q ++ +H K++ H++ LR YG +
Sbjct: 1207 EGPHSALYTMMKDQYANYVVQKMIDVAEPTQRKIVMH-----KIRPHISTLRKYTYGKH 1260
>gi|347970899|ref|XP_318367.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|347970901|ref|XP_003436659.1| AGAP003914-PC [Anopheles gambiae str. PEST]
gi|333469538|gb|EAA13588.5| AGAP003914-PA [Anopheles gambiae str. PEST]
gi|333469540|gb|EGK97333.1| AGAP003914-PC [Anopheles gambiae str. PEST]
Length = 869
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 141/311 (45%), Gaps = 27/311 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL S +F + G + LM+ +G +V KF E + Q +
Sbjct: 436 QHGSRFIQQKLERAISVEKQLVFNEILGAAYSLMTDVFGNYVIQKFFEFGSPEQKQALAQ 495
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
++ + + LA + +G ++K ++ + L HV+ +K +
Sbjct: 496 QV--KGHVLPLA-LQMYGCRVIQKALESIPAEQQQEIVRELDGHVLKCVK--------DQ 544
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 545 NGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPILAE 604
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ N L + + GNYV+QHVL P A+ ++RG + LS K S VV+K + +
Sbjct: 605 LHANTEHLIQDQYGNYVIQHVLEHGKPEDKSALIASVRGKVLILSQHKFASNVVEKCVTH 664
Query: 235 QNAVHY--IVEELLN-SDQILQV-ASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQ 289
++EE+ + +D L V D+Y NYV+Q + V Q ++ +H K++
Sbjct: 665 ATRAERALLIEEVCSFNDSGLHVMMKDQYANYVVQKMIDVSEPTQRKVLLH-----KIRP 719
Query: 290 HLAALRVMKYG 300
H+ +L+ YG
Sbjct: 720 HMNSLKKYTYG 730
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 87/190 (45%), Gaps = 10/190 (5%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + Q H L LA GC + ++++ ++++I+ +
Sbjct: 474 GNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPAEQQQEIVREL 533
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + ++GN+VVQ + DP + I A R LS G V+Q+ L++
Sbjct: 534 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHC 593
Query: 235 --QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ + E N++ ++Q D+YGNYVIQ L +D+ + L+ ++ +
Sbjct: 594 TPEQTAPILAELHANTEHLIQ---DQYGNYVIQHVLEHGKPEDKSA----LIASVRGKVL 646
Query: 293 ALRVMKYGSN 302
L K+ SN
Sbjct: 647 ILSQHKFASN 656
>gi|74148485|dbj|BAE36346.1| unnamed protein product [Mus musculus]
Length = 534
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 208 QHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 267
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ ++ L HV+ +K +
Sbjct: 268 RIRGH---VLPLALQMYGYRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 316
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 317 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 376
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 377 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 436
Query: 235 QNAVHY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + + + D+Y NYV+Q + D QR ++
Sbjct: 437 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 490
Query: 286 KLQQHLAALRVMKYG 300
K++ H+ LR YG
Sbjct: 491 KIRPHITTLRKYTYG 505
>gi|167389199|ref|XP_001738858.1| pumilio [Entamoeba dispar SAW760]
gi|165897686|gb|EDR24768.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 440
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 142/305 (46%), Gaps = 22/305 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNES--QLALI 58
++GS+ +Q L++ + +LF + G +ELM+ +G +V KFIE N+ Q
Sbjct: 134 QQGSRRIQTFLTTAKEFEITELFDSIKGDLYELMNDLFGNYVVQKFIELGNDKLRQFVHS 193
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
I++ + S +G ++K+I+ + + + +++ L+ + G+
Sbjct: 194 IIR-----GRVVELSKHMYGCRVIQKVIERSNTNEN--ERIFNEIEKSIIELIEDQNGNH 246
Query: 119 VILKCLEPSYNHKNDFIY--QAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E + +Y Q +E + H GC + I+ + QI +
Sbjct: 247 VIQKIIENYWECIEKILYALQGQIEK---YSGHGFGCRVMQRIIEKRFDNFNNQIFQELQ 303
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
N LS ++ GNYV+QH+L + + +AI + + + SL K S V++K +++
Sbjct: 304 GNIIVLSMNQFGNYVIQHLLEFGNDIIREAIINEVEHVFFESSLLKFSSNVMEKCVQFGP 363
Query: 235 QNAVHYIVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVH----QRLVTKLQ 288
N ++++L + D I ++ D + NYV+Q RL + QR +T L+
Sbjct: 364 SNKQQILIKKLFDCSDDMIYKMMKDPFANYVLQRMFTMMNNDQRLQFYTSYVQRNITSLR 423
Query: 289 QHLAA 293
+++ A
Sbjct: 424 KNIYA 428
>gi|70984262|ref|XP_747647.1| mRNA binding protein Pumilio 2 [Aspergillus fumigatus Af293]
gi|66845274|gb|EAL85609.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
Af293]
gi|159122433|gb|EDP47554.1| mRNA binding protein Pumilio 2, putative [Aspergillus fumigatus
A1163]
Length = 908
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 146/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V K E N+SQ ++
Sbjct: 503 QHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 562
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 563 QMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVRDQNGN 614
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 615 HVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRESILAELHA 674
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N E+ I L + S K S VV+K +++
Sbjct: 675 CTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLS-QLLMYSKHKFASNVVEKSIEFGE 733
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I+ L ++++ +L + D+YGNYVIQ L + ++R + L+ +++
Sbjct: 734 ESQRQQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEER----EGLIDQIRP 789
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 790 LLSQLKKFSYG 800
Score = 40.4 bits (93), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N L GNYVVQ + +
Sbjct: 495 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 554
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 555 SQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLKCVRDQN 612
Query: 260 GNYVIQTAL 268
GN+VIQ A+
Sbjct: 613 GNHVIQKAI 621
>gi|388855193|emb|CCF51087.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Ustilago hordei]
Length = 959
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 73/327 (22%), Positives = 138/327 (42%), Gaps = 47/327 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++QEKL S +F V +LM+ +G +V K +E +E Q +L
Sbjct: 610 QHGSRFIQEKLDSASDEEKKLVFHEVLPQARQLMTDVFGNYVIQKMLEHGDEEQRD--VL 667
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+ + L S+ +G V+K ++ S L H+M ++ +
Sbjct: 668 GREMEGHILSL-SLGTYGCRVVQKAFDHISASQREKLAAELDGHIMQCVR--------DQ 718
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
+ V+ K +E + K DFI +A + LA H C L + + + + +L
Sbjct: 719 NANHVVQKVIERVHPTKMDFIPKAFIGQVASLASHCYSCRVLQRCFECCEEGQTRALLEE 778
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ A L +H+ GNYV+Q VL P+ + ++G + LS K S V+++ ++
Sbjct: 779 LHAEAFGLMQHQYGNYVIQWVLQSGKPYDRARVISKIKGLVLTLSRHKFASNVIEQVIRT 838
Query: 235 QNAV--HYIVEELLNSDQI------------------------LQVASDKYGNYVIQTAL 268
N+ + ++EE+L + + + + D++ NYV+Q L
Sbjct: 839 CNSTDRNELLEEILTATPLPSPYSSEENTANAARPSPCKIAPAVLMMKDQFANYVLQRFL 898
Query: 269 VETMRQDRLSVHQRLVTKLQQHLAALR 295
+ + R +L+ + L A R
Sbjct: 899 EKADTEQR----SKLIDLVHPSLIAAR 921
>gi|357153506|ref|XP_003576473.1| PREDICTED: putative pumilio homolog 7, chloroplastic-like
[Brachypodium distachyon]
Length = 445
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 43/287 (14%)
Query: 2 EGSQYLQEKLSSG---DSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ Q + + L SG D++I+ L + + L+ +G + + CN S LI
Sbjct: 140 KNEQMVLDTLFSGSPVDAQIVADL---IVRYAVHLLESSHGNRLLDLVLNHCNHSLHGLI 196
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ---------------SPPLLYHVMSAL 103
+ +IT DK S V ++I+ +P +++ +++
Sbjct: 197 VARIT----------RDKNRSDEVARVIRSCRSVKSLQLLRNAIMPWIAPSMMHQLVTDS 246
Query: 104 KRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 163
RL ++C+ Y K FI+ A ++CL LA G L + +++
Sbjct: 247 NRLRVV--------QAFVQCVPDPYFAK--FIFDAIAKNCLALAYGSHGVSLLRSCLEHA 296
Query: 164 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKC 223
+ + + +L IS + L+++R GNY+VQ VL +P + I R +YV LS +
Sbjct: 297 EWTEKDDVLSKISCWSIELAQNRFGNYIVQDVLKQRNPSHLAIIASCFRNNYVLLSKQRY 356
Query: 224 GSFVVQKFLK-YQNAVH-YIVEELLNSDQILQVASDKYGNYVIQTAL 268
S VV+ L+ + +A +I++EL+ + + ++ NYVI AL
Sbjct: 357 SSNVVETCLQVFVDAERFFIIDELIWCPHFKDLVTHEFANYVISRAL 403
>gi|167393984|ref|XP_001740790.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165894881|gb|EDR22713.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 435
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 133/284 (46%), Gaps = 25/284 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G LQ+ L + +F + EL++ G+++ K +E +E
Sbjct: 135 GCSLLQKLLDGASKESVLLIFKEIEDSLEELITHPNGQYILPKIVEFGSEE--------- 185
Query: 63 TFQDQLFLLASVD-------KFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
+D +F + S + +FG +V+K+ + + + S + R +++ P
Sbjct: 186 -IKDNVFGVVSENLVKYCCHQFGGYTVQKIAPFMRER---HIQIWSPILRNNIAILIIDP 241
Query: 116 GSSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
++ +++ L +N KN DF Y+ + + ++ + GC L + +DN + I
Sbjct: 242 HANYVIQTLLKIFNEKNSDFFYRGLKDCVVDISKTKIGCSVLTHAMDNSTIQQINSIKPQ 301
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK- 233
+ N L + + GN+++QH++ DP +I I ++ + V S K S VV+K LK
Sbjct: 302 LLSNCCDLIQDQYGNFIIQHLME-NDPTIISDIIHKIKDNIVFYSKQKFSSNVVEKCLKC 360
Query: 234 -YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDR 276
+N +++ L + ++ + D+YGN+VIQ A ++ + ++R
Sbjct: 361 STENVRQPLLDVLSQPESLVALVEDQYGNFVIQ-AFLDVLPENR 403
>gi|119467660|ref|XP_001257636.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
gi|119405788|gb|EAW15739.1| mRNA binding protein Pumilio 2, putative [Neosartorya fischeri NRRL
181]
Length = 908
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 146/311 (46%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V K E N+SQ ++
Sbjct: 503 QHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 562
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 563 QMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVRDQNGN 614
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 615 HVIQKAIERVPSQYVQFIINAFKGQVSRLAAHPYGCRVIQRMLEHCEEVDRESILAELHA 674
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
A L + GNYV+QHV+ N E+ I L + S K S VV+K +++
Sbjct: 675 CTAHLIPDQFGNYVIQHVIENGEEKDRSRMINVVLS-QLLMYSKHKFASNVVEKSIEFGE 733
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I+ L ++++ +L + D+YGNYVIQ L + ++R + L+ +++
Sbjct: 734 ESQRRQIISTLTSANERGESPLLGLMRDQYGNYVIQKVLGQLKGEER----EALIDQIRP 789
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 790 LLSQLKKFSYG 800
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N L GNYVVQ + +
Sbjct: 495 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 554
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 555 SQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLKCVRDQN 612
Query: 260 GNYVIQTAL 268
GN+VIQ A+
Sbjct: 613 GNHVIQKAI 621
>gi|323304919|gb|EGA58676.1| Puf4p [Saccharomyces cerevisiae FostersB]
Length = 705
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 111/237 (46%), Gaps = 8/237 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G ++LQ++L S+ D +F +T ELM+ +G ++ K +E Q +++
Sbjct: 459 QHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ-RIVLT 517
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
KI+ F+ S++ G+ +++KLI+ + V+ +L+ L G+ VI
Sbjct: 518 KIS--SPHFVEISLNPHGTRALQKLIECIKTDEEAQI-VVDSLRPYTVQLSKDLNGNHVI 574
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KCL+ FI+ A + C+ +A H GC L +D+ + + +
Sbjct: 575 QKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVD 634
Query: 181 SLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
L+ GNYVVQ+++ E I L+ ++LS+ K GS V++K L+
Sbjct: 635 KLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKNLE 691
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 19/203 (9%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ +I K LE + + + + H + ++ + G L I+ +K
Sbjct: 491 LMTDSFGNYLIQKLLEEVTTEQRIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEA 550
Query: 170 QIL-HLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCG 224
QI+ + LS+ +GN+V+Q L P F+ DAI + +D++ + G
Sbjct: 551 QIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSC----IDIATHRHG 606
Query: 225 SFVVQKFLKYQNAVHYIVEELLN-SDQILQVAS----DKYGNYVIQTALVETMRQDRLSV 279
V+Q+ L H E+ N D++L + D +GNYV+Q + + +++
Sbjct: 607 CCVLQRCLD-----HGTTEQCDNLCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDY 661
Query: 280 HQRLVTKLQQHLAALRVMKYGSN 302
++V L+ L + K+GSN
Sbjct: 662 THKIVHLLKPRAIELSIHKFGSN 684
>gi|361128047|gb|EHK99999.1| putative Pumilio like protein [Glarea lozoyensis 74030]
Length = 447
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S ++LF + +LM+ +G +V K E N Q+ +L
Sbjct: 59 QHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGN--QIQKRVL 116
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G V+K ++ + Q L+ + S + + K + G+
Sbjct: 117 AEQMKNHVMEL-SMQMYGCRVVQKALEHVLADQQAELVEELRSDVLKCVK----DQNGNH 171
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E F+ A LA H GC + ++ K + +L +
Sbjct: 172 VVQKAIERVPTEHIQFVIDAFRGQVHVLATHPYGCRVIQRILEYCKPHDQAVVLEELHQC 231
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A+ L + GNYV QHV+ P I + + LS K S VV+K +++ +
Sbjct: 232 ASMLITDQYGNYVTQHVIQHGKPEDRAKIIKIITAQLLTLSKHKFASNVVEKSIQFGTSE 291
Query: 239 H--YIVEEL--LNSD--QILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
IV +L ++SD LQ + D+YGNYVIQ L + ++R V ++ L
Sbjct: 292 QRKAIVAQLTAMHSDGSSPLQLMMKDQYGNYVIQKLLGQLKGEER----DNFVEDMKPQL 347
Query: 292 AALRVMKYG 300
L+ +G
Sbjct: 348 IQLKKYNFG 356
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I NA L GNYV+Q + +
Sbjct: 51 HVVEFSGDQHGSRFIQQKLETANSDEKEQLFREIQPNALQLMTDVFGNYVIQKLFEHGNQ 110
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++ H ++LS+ G VVQK L++ + +VEE L SD +L+ D+
Sbjct: 111 IQKRVLAEQMKNHVMELSMQMYGCRVVQKALEHVLADQQAELVEE-LRSD-VLKCVKDQN 168
Query: 260 GNYVIQTAL 268
GN+V+Q A+
Sbjct: 169 GNHVVQKAI 177
>gi|389748876|gb|EIM90053.1| ARM repeat-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 400
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 141/311 (45%), Gaps = 34/311 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL S S +F +V L+ +G +V K E + +Q+ +
Sbjct: 51 QHGSRFIQQKLESASSEEKQFVFDEIVPSNALALIQDVFGNYVIQKLFE--HGTQVQKTV 108
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLY------HVMSALKRLFKFLMMT 113
L + + + L S+ +G V+K ++ + ++ HV+ +K
Sbjct: 109 LATSMETHILSL-SLQMYGCRVVQKAVEYILPEQQSIFVKELEPHVLRCVK--------D 159
Query: 114 KPGSSVILKCLEPSYNHKNDFI--YQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
G+ VI K +E + F+ +Q H L+ H GC L +++ + + +
Sbjct: 160 ANGNHVIQKLIERVAPERLGFVPSFQG---HVWELSTHPYGCRVLQRCFEHLAEDQTRPL 216
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + + +L + + GNYV+Q+VL P + I LRG + +S K S V +K
Sbjct: 217 LEELHKHTRNLMQDQFGNYVIQYVLEHGKPQDRNLIINQLRGQMMAMSRHKFASNVCEKA 276
Query: 232 LKYQNAV--HYIVEELL-----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L ++ +++E++ + I+ + D+Y NYV+Q A+V R L+
Sbjct: 277 LVTADSASRRQLIDEIMVPRHDGASPIITMMKDQYANYVLQRAMVVAEGDQR----DELL 332
Query: 285 TKLQQHLAALR 295
+K++ L ++R
Sbjct: 333 SKVRPQLNSMR 343
>gi|213402367|ref|XP_002171956.1| PUF3 [Schizosaccharomyces japonicus yFS275]
gi|212000003|gb|EEB05663.1| PUF3 [Schizosaccharomyces japonicus yFS275]
Length = 840
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 44/321 (13%)
Query: 1 EEGSQYLQEKLS--SGDSRILDKLFW-VVSGFTFELMSGQYGRFVFGKFIESCNESQLAL 57
+ GS++LQ+K+ S + R L LF +V+G +LM +G +V K +E + Q +
Sbjct: 513 QHGSRFLQQKIETCSDEDRAL--LFHDIVNGNCLQLMMDVFGNYVVQKLLEFGTDEQREV 570
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHV--MSALKRLFKFLMMTKP 115
K+ L S+ +G +K ++ + PL V + L + +
Sbjct: 571 FTEKMKGH---VLTLSLQMYGCRVAQKALEHI----PLNRQVELIQELDGDVLKCVKDQN 623
Query: 116 GSSVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR------ 167
G+ VI K +E P Y H F+ A + + L+ H GC + I++ +R
Sbjct: 624 GNHVIQKAIECIP-YGHL-QFVVDAVMPNVYNLSSHPYGCRVIQRIIEHFADARSSVYLQ 681
Query: 168 -RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
QILHL ++ + GNYV+QH++ P I + G+ + LS K S
Sbjct: 682 LHTQILHL--------AQDQYGNYVIQHLMKKGSPSEQREIVEVVLGNVLHLSRHKFASN 733
Query: 227 VVQKFLKY------QNAVHYIVEELLNSDQ-ILQVASDKYGNYVIQTALVETMRQDRLSV 279
VV++ + Y + + ++ E + D +L + DKY NYVIQ L++ + + +
Sbjct: 734 VVERCISYCSDTDRERFFNSLLGENEDGDTYLLNLIKDKYANYVIQ-KLIDVSKPE---L 789
Query: 280 HQRLVTKLQQHLAALRVMKYG 300
R++T L HL L+ YG
Sbjct: 790 RDRIITVLNPHLNVLKNYTYG 810
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 96/199 (48%), Gaps = 17/199 (8%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LMM G+ V+ K LE + + + + H L L+ GC ++++ +R+
Sbjct: 546 LMMDVFGNYVVQKLLEFGTDEQREVFTEKMKGHVLTLSLQMYGCRVAQKALEHIPLNRQV 605
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVL------NLEDPFLIDAICFALRGHYVDLSLTKC 223
+++ + + + ++GN+V+Q + +L+ F++DA+ + +LS
Sbjct: 606 ELIQELDGDVLKCVKDQNGNHVIQKAIECIPYGHLQ--FVVDAVMPNV----YNLSSHPY 659
Query: 224 GSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRL 283
G V+Q+ +++ V L++ QIL +A D+YGNYVIQ M++ S + +
Sbjct: 660 GCRVIQRIIEHFADARSSVYLQLHT-QILHLAQDQYGNYVIQ----HLMKKGSPSEQREI 714
Query: 284 VTKLQQHLAALRVMKYGSN 302
V + ++ L K+ SN
Sbjct: 715 VEVVLGNVLHLSRHKFASN 733
>gi|308502562|ref|XP_003113465.1| CRE-PUF-8 protein [Caenorhabditis remanei]
gi|308263424|gb|EFP07377.1| CRE-PUF-8 protein [Caenorhabditis remanei]
Length = 536
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 148/315 (46%), Gaps = 33/315 (10%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL DS+ D +F V EL+ +G +V KF E E A ++ +
Sbjct: 210 GSRFIQQKLEFCDSKEKDAIFDEVVAHAPELVDDIFGNYVVQKFFEYGEEKHWARLVDAV 269
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
D++ A + ++K ++ V++ PL +++ ++ + M + G+ VI K
Sbjct: 270 V--DRIPEYA-FQMYACRVLQKALEKVSE--PLQIKILARVRHVIHRCMKDQNGNHVIQK 324
Query: 123 CLEPSYNHKNDFIYQAALEH--CLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+E FI LE+ +Y ++ GC + +++ + + ++ I
Sbjct: 325 AIEKVSPPYVQFIVSTLLENPDTIYDMSVDPYGCRVVQRCLEHCIPQQTRPVIERIHERF 384
Query: 180 ASLSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
++ ++ GNYVVQHV+ + + +++ + L + S K S V++K L+ +
Sbjct: 385 DDIANNQYGNYVVQHVILHGSDADRMLIVNRVADNL----FEFSTHKYSSNVIEKCLE-R 439
Query: 236 NAVHY---IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
A+H+ +V + + ++Q+ D+Y NYV+Q D+++ QR L+
Sbjct: 440 GAIHHKAMLVGAACSQPEGCMPIVVQMMKDQYANYVVQKMF------DQVTSDQRRELIL 493
Query: 286 KLQQHLAALRVMKYG 300
++ H+ LR +G
Sbjct: 494 TVRSHIPVLRQFPHG 508
>gi|387594744|gb|EIJ89768.1| hypothetical protein NEQG_00538 [Nematocida parisii ERTm3]
gi|387596408|gb|EIJ94029.1| hypothetical protein NEPG_00694 [Nematocida parisii ERTm1]
Length = 461
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 138/308 (44%), Gaps = 24/308 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+++Q+KL S +D F + + EL+ +G +V KF+E Q I
Sbjct: 155 QEGSRFIQKKLDSATIEEIDITFEEICPWISELIVDLFGNYVVQKFLEIGTTEQREKIFF 214
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + ++ +G ++K + + + ++ +K L+ + G+ V+
Sbjct: 215 AM---ESTIISLALHMYGCRVIQKAL----ECKDINRKIVEKIKGHVIDLVCDQNGNHVV 267
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E +DF+ + E + L+ H GC + +N ++ + I NA
Sbjct: 268 QKCVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFEN--STKCASAIDKIISNAK 322
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNAV 238
L + GNYV+QH+L I L + + S+ K S V++K
Sbjct: 323 LLVEDQYGNYVIQHILEKGTHAHKRKIITELSDNIAEYSIHKFASNVMEKCVICGTSEDR 382
Query: 239 HYIVEELLNS------DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
Y++++L ++ D ++ + DK+GNYV+Q L D+ + L++ L+ ++A
Sbjct: 383 RYMLKQLKSAVGPAGEDLLVHITMDKFGNYVVQRLLDVLTGADK----EVLMSHLRANIA 438
Query: 293 ALRVMKYG 300
L+ Y
Sbjct: 439 DLKKSSYA 446
>gi|357445493|ref|XP_003593024.1| Pumilio domain-containing protein [Medicago truncatula]
gi|355482072|gb|AES63275.1| Pumilio domain-containing protein [Medicago truncatula]
Length = 396
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 121/270 (44%), Gaps = 21/270 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIES---CNESQLAL 57
E QYL + G+ + V + +LM ++G + K E+ Q+
Sbjct: 123 ERDCQYLHAIIDEGNPTNAAMILSKVKDYLHDLMMHRFGSTLIKKIFEAKKGMAMEQMDS 182
Query: 58 IILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
I+ I D+ ++ +G+ ++ ++ + P + + V A+KR LM GS
Sbjct: 183 IVYLILANDRKMWDVCINYYGTRVMQTILHN-TRHPFMKFVVAYAVKRNTTALMKNTNGS 241
Query: 118 SVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
VI++C++ PS K I +C +A + GC+ + + + +G+ ++ I
Sbjct: 242 HVIVQCVKLFPSILKK--MILDEVARNCCNIATDKIGCLAVKRCLKHGEGTAIDLLVTQI 299
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
NA L YV++ L ++I+ + + LS+ K S V++ L++
Sbjct: 300 ISNAMVL-------YVIKMKFPLAKEWMIEE----FQNKFDRLSMNKYASNVMEYLLRFS 348
Query: 236 N--AVHYIVEELLNSDQILQVASDKYGNYV 263
N AV IVEE++ S L+V D +GNYV
Sbjct: 349 NKSAVKVIVEEIMRSRNFLKVLQDPFGNYV 378
>gi|16209558|gb|AAL14121.1| pumilio-like protein 1 [Xenopus laevis]
Length = 692
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 364 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 421
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 422 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 479
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 480 VQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 539
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 540 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQDKFASNVVEKCVTHASRTE 599
Query: 240 --YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + + + D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 600 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 654
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 655 ATLRKYTYG 663
>gi|71983283|ref|NP_495523.3| Protein PUF-8 [Caenorhabditis elegans]
gi|351065107|emb|CCD66262.1| Protein PUF-8 [Caenorhabditis elegans]
Length = 535
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 146/313 (46%), Gaps = 28/313 (8%)
Query: 3 GSQYLQEKLSSGDSRI-LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
GS+++Q++L+S R D +F V EL+ +G +V KF E E A ++
Sbjct: 208 GSRFIQQELASSKDRFEKDSIFDEVVSNADELVDDIFGNYVVQKFFEYGEERHWARLVDA 267
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
I D++ A + ++K ++ + + PL ++S ++ + M + G+ V+
Sbjct: 268 II--DRVPEYA-FQMYACRVLQKALEKINE--PLQIKILSQIRHVIHRCMKDQNGNHVVQ 322
Query: 122 KCLEPSYNHKNDFIYQAALE--HCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
K +E FI LE + +Y ++ GC + +++ S+ K ++ I
Sbjct: 323 KAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVIGQIHKR 382
Query: 179 AASLSRHRSGNYVVQHVL---NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
++ ++ GNYVVQHV+ + ED + I + + + + K S V++K L+ Q
Sbjct: 383 FDEIANNQYGNYVVQHVIEHGSEEDRMV---IVTRVSNNLFEFATHKYSSNVIEKCLE-Q 438
Query: 236 NAVHY---IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
AV++ IV + + ++Q+ D+Y NYV+Q + + R + L+ +
Sbjct: 439 GAVYHKSMIVGAACHHQEGSVPIVVQMMKDQYANYVVQKMFDQVTSEQR----RELILTV 494
Query: 288 QQHLAALRVMKYG 300
+ H+ LR +G
Sbjct: 495 RPHIPVLRQFPHG 507
>gi|390598145|gb|EIN07544.1| hypothetical protein PUNSTDRAFT_53691 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 570
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 33/311 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFW--VVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ GS+++Q+KL + + +F V G +L +G +V K +E C+ +Q +
Sbjct: 248 QHGSRFIQQKLEGASAEEREAVFAEIVPGGHALQLTQDVFGNYVVQKLLEHCSPAQR--V 305
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKP 115
+ D + L S+ +G V+K ++ + +S H ++ L ++
Sbjct: 306 AIAECLSDHVLAL-SLQMYGCRVVQKALEYLPES-----HQAKFVRELEPHVIRCVKDAN 359
Query: 116 GSSVILKCLE---PSY-NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
G+ VI K +E PS N F H LA H GC L ++ + + + +
Sbjct: 360 GNHVIQKIIERVNPSLLTFVNGF-----QSHVFELASHPYGCRVLQRCLEYLSPEQTRGL 414
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + L + + GNYV+Q VL P + LRG + ++ K S V +K
Sbjct: 415 LAELHECTIQLMQDQFGNYVIQFVLEHGAPQDRAEVVQKLRGQMLPMARHKFASNVCEKA 474
Query: 232 L--KYQNAVHYIVEELL-----NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L ++ +++E+L S I+ + D+Y NYV+Q A V T D+ + L+
Sbjct: 475 LVTAEPDSRRALIDEILAQGADGSSPIVTMMKDQYANYVLQRA-VSTAEPDQ---QETLI 530
Query: 285 TKLQQHLAALR 295
++++ L +R
Sbjct: 531 SRIRPQLLTMR 541
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ K LE + I + +H L L+ GC + ++ + S + + + +
Sbjct: 288 GNYVVQKLLEHCSPAQRVAIAECLSDHVLALSLQMYGCRVVQKALEYLPESHQAKFVREL 347
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + +GN+V+Q ++ +P L+ + + H +L+ G V+Q+ L+Y
Sbjct: 348 EPHVIRCVKDANGNHVIQKIIERVNPSLLTFVN-GFQSHVFELASHPYGCRVLQRCLEYL 406
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ EL + +Q+ D++GNYVIQ L QDR V V KL+ +
Sbjct: 407 SPEQTRGLLAEL--HECTIQLMQDQFGNYVIQFVLEHGAPQDRAEV----VQKLRGQMLP 460
Query: 294 LRVMKYGSN 302
+ K+ SN
Sbjct: 461 MARHKFASN 469
>gi|300706085|ref|XP_002995351.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
gi|239604391|gb|EEQ81680.1| hypothetical protein NCER_101799 [Nosema ceranae BRL01]
Length = 512
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 127/273 (46%), Gaps = 19/273 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+ +Q ++ + F + ++L S +G +V K + NESQ +
Sbjct: 211 QEGSRLIQNRIDISTENEIAWFFSQIEDSIYDLSSNLFGNYVIQKILPLLNESQKFTVFT 270
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F+ +++ L S+ +G ++KL+ + ++ +K+ L+ + G+ VI
Sbjct: 271 E--FKSRIYDL-SLHPYGCRVIQKLMDCFE----CIDFIIEEIKQDIFCLIEDQNGNHVI 323
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E S + + I + ++L+ H GC + ++ + K+IL ++ N
Sbjct: 324 QKYIEKSPDK--NLIIDVFKKDPIFLSTHRYGCRVIQRLLEFCVEADVKKILQILISNLE 381
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
SL + GNYV+QH+L + D +A+ + + +LS K S V+++ + + H
Sbjct: 382 SLVNDQYGNYVIQHMLTISDDSERNAVISQIINNCYNLSKFKFSSNVIEQCIVISD--HE 439
Query: 241 IVEELLN--------SDQILQVASDKYGNYVIQ 265
LN +I + +D YGNYV+Q
Sbjct: 440 QKNRFLNKFLEVSGGKPRIFNMCTDMYGNYVVQ 472
>gi|350636136|gb|EHA24496.1| translation repression protein [Aspergillus niger ATCC 1015]
Length = 894
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 145/313 (46%), Gaps = 26/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + + +LM+ +G +V K E N++Q ++
Sbjct: 486 QHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 545
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 546 QMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRCVRDQNGN 597
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 598 HVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELHA 657
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ L + GNYV+QHV+ N ED I + + S K S VV+K ++Y
Sbjct: 658 CTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS-QLLTYSKHKFASNVVEKSIEYGE 716
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKL 287
++ ++ L + ++ ++ + D+YGNYVIQ L ++ +++ S L ++
Sbjct: 717 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQLDDTSEEKYS----LAVRI 772
Query: 288 QQHLAALRVMKYG 300
Q L L+ YG
Sbjct: 773 QPMLDQLKKFSYG 785
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 478 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 537
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 538 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 595
Query: 260 GNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 596 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 642
>gi|71395516|ref|XP_802323.1| pumilio/PUF RNA binding protein 3 [Trypanosoma cruzi strain CL
Brener]
gi|70861784|gb|EAN80877.1| pumilio/PUF RNA binding protein 3, putative [Trypanosoma cruzi]
Length = 449
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 6/235 (2%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S+GD + + V ELM QY F+ K + Q
Sbjct: 207 QHGCRFLQRLLGGSNGDGEFVRIIMNEVVPHVAELMIDQYANFLIQKLFDMM--PQDVRY 264
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ +A + G+ SV+K+++ +A + + AL + L+ G+
Sbjct: 265 KVACVAAPKIISIA-LTPHGTFSVQKMVETIASREEMDI-LREALSKDVVRLVKDAHGNH 322
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K L+ + +FIY A C+ +A ++QGC L ++ S+R +++ I
Sbjct: 323 VIQKVLQRFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRC 382
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
++ GNYV+Q+VL D D I A H V L + K S V++K L+
Sbjct: 383 CLQIAEDPFGNYVLQYVLESNDSKTTDTIAIAFLPHLVQLCMNKFSSNVIEKVLR 437
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 70/167 (41%), Gaps = 9/167 (5%)
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISVNAASLSRHRSGNYVVQHVLN 197
A + +A G ++ ++ + IL +S + L + GN+V+Q VL
Sbjct: 270 AAPKIISIALTPHGTFSVQKMVETIASREEMDILREALSKDVVRLVKDAHGNHVIQKVLQ 329
Query: 198 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQILQVA 255
+ I A+ + ++ K G V+Q+ L+Y + +V ++L LQ+A
Sbjct: 330 RFSHADKEFIYAAVGSDCISIAKNKQGCCVLQRCLEYASCSQRATLVNQILRC--CLQIA 387
Query: 256 SDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
D +GNYV+Q L + + HL L + K+ SN
Sbjct: 388 EDPFGNYVLQYVL----ESNDSKTTDTIAIAFLPHLVQLCMNKFSSN 430
>gi|294655796|ref|XP_457992.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
gi|199430612|emb|CAG86050.2| DEHA2C07128p [Debaryomyces hansenii CBS767]
Length = 820
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 142/306 (46%), Gaps = 23/306 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +++LM+ +G +V K+ E S + IL
Sbjct: 489 QHGSRFIQQKLPESSDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHG--SPIQKKIL 546
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ L S+ FG V++ ++ + + ++ LK + G+ VI
Sbjct: 547 LDCMIGHIYEL-SLQTFGCRVVQRALEAIDLDGQI--QIIEELKDYILVCAKDQNGNHVI 603
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E + +F+ ++ +L+ H GC + +++ RK+IL ++
Sbjct: 604 QKSIETIPFDRIEFVLESLDNQIYHLSTHPYGCRVIQRLLEHSDAEDRKKILGELNRFIF 663
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY------ 234
L + + GNYV+QH L +P + I + G V+ S K S V++K +K+
Sbjct: 664 YLIQDQYGNYVMQHTLERGNPEDREEILKIVLGSVVNFSKHKFASNVIEKCIKFGTLDQR 723
Query: 235 QNAVH--------YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR-LVT 285
+ +H Y VE + + + + D+Y NYVIQ LVE D S ++ LV
Sbjct: 724 RRILHEVMIGNEDYNVETVSDDSALALMMKDQYANYVIQ-KLVEGF--DAKSDEKKILVV 780
Query: 286 KLQQHL 291
KL+Q+L
Sbjct: 781 KLRQYL 786
>gi|121703716|ref|XP_001270122.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
gi|119398266|gb|EAW08696.1| mRNA binding protein Pumilio 2, putative [Aspergillus clavatus NRRL
1]
Length = 908
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 143/311 (45%), Gaps = 24/311 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM+ +G +V K E N+SQ ++
Sbjct: 501 QHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 560
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 561 QMKGH---VLALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVRDQNGN 612
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 613 HVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEHCEEEDRESILAELHA 672
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
L + GNYV+QHV+ N E+ I L V S K S VV+K +++
Sbjct: 673 CTTHLIPDQFGNYVIQHVIENGEEKDRSRMITIVLSQLLV-YSKHKFASNVVEKSIEFGE 731
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
++ I+ L + + +L + D+YGNYVIQ L + ++R + L+ +++
Sbjct: 732 ESQRRQIISTLTSPNDRGESPLLGLMRDQYGNYVIQKVLGQLKGEER----EGLIEQIRP 787
Query: 290 HLAALRVMKYG 300
L+ L+ YG
Sbjct: 788 LLSQLKKFSYG 798
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N L GNYVVQ + +
Sbjct: 493 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQ 552
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 553 SQKKILANQMKGHVLALSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLKCVRDQN 610
Query: 260 GNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 611 GNHVIQKAIERVPSQYVQFIINAFKGQVNRLAAHPYGCRVIQRMLEH 657
>gi|123509694|ref|XP_001329922.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121912972|gb|EAY17787.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 408
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 119/267 (44%), Gaps = 14/267 (5%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQ++++ D +F + EL+ FV K E+ E Q + + L +D
Sbjct: 103 LQDQIARATPTERDTIFNALYPHMGELVCDGAANFVIQKLCENITEEQQSRM-LSFFLED 161
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
F++ + G ++K I+ SP + + AL F L ++ G+ + + +
Sbjct: 162 VQFIVDHPN--GCRVLQKFIE--QTSPKNIDPIFLALLPRFVELCSSQNGNHIAQRFIIK 217
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N + I + H L GC + D ++ + A +L+ ++
Sbjct: 218 IPNRVPEIIDKIK-GHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVLCRAETLATNQ 276
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK-----YQNAVHYI 241
GNYVVQ++LN P I A+ A GH+ + S+ K S V++K ++ QN +
Sbjct: 277 FGNYVVQNILNSGTPEHIQALIRAFTGHFYEFSMHKFASNVIEKCIRKANQQQQNMIFTE 336
Query: 242 V---EELLNSDQILQVASDKYGNYVIQ 265
+ EE N +I ++ SD++GNYVIQ
Sbjct: 337 IIGPEENYNKPRIKEMVSDQFGNYVIQ 363
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 140 LEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLE 199
LE ++ H GC L FI+ I + L ++GN++ Q + ++
Sbjct: 159 LEDVQFIVDHPNGCRVLQKFIEQTSPKNIDPIFLALLPRFVELCSSQNGNHIAQRFI-IK 217
Query: 200 DPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI--VEELLNSDQILQVASD 257
P + I ++GH +L + G V+Q+ Q I V+E+L + L A++
Sbjct: 218 IPNRVPEIIDKIKGHVYELVVDNWGCRVIQQLFDRQPIQDLIPLVDEVLCRAETL--ATN 275
Query: 258 KYGNYVIQTALVETMRQDRLSVH-QRLVTKLQQHLAALRVMKYGSN 302
++GNYV+Q L + H Q L+ H + K+ SN
Sbjct: 276 QFGNYVVQNILNSGTPE-----HIQALIRAFTGHFYEFSMHKFASN 316
>gi|317035324|ref|XP_001396658.2| mRNA binding protein Pumilio 2 [Aspergillus niger CBS 513.88]
Length = 912
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 145/313 (46%), Gaps = 26/313 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + + +LM+ +G +V K E N++Q ++
Sbjct: 504 QHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQTQKKILAN 563
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 564 QMKGH---ILSLSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLRCVRDQNGN 615
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI A LA H GC + +++ + R+ IL +
Sbjct: 616 HVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEHCEEVDRESILGELHA 675
Query: 178 NAASLSRHRSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-- 234
+ L + GNYV+QHV+ N ED I + + S K S VV+K ++Y
Sbjct: 676 CTSKLITDQFGNYVIQHVIENGEDKDRSRMIVVVMS-QLLTYSKHKFASNVVEKSIEYGE 734
Query: 235 QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVTKL 287
++ ++ L + ++ ++ + D+YGNYVIQ L ++ +++ S L ++
Sbjct: 735 ESQRRQMISTLTSVNERGDSSLISLMRDQYGNYVIQKILGQLDDTSEEKYS----LAVRI 790
Query: 288 QQHLAALRVMKYG 300
Q L L+ YG
Sbjct: 791 QPMLDQLKKFSYG 803
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 73/167 (43%), Gaps = 20/167 (11%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ ++Q+ I N+ L GNYVVQ + +
Sbjct: 496 HIVEFSGDQHGSRFIQQKLETANSDEKEQVFREIQSNSLQLMTDVFGNYVVQKLFEHGNQ 555
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
+ ++GH + LS G VVQK L++ + +V+EL N +L+ D+
Sbjct: 556 TQKKILANQMKGHILSLSTQMYGCRVVQKALEHILTDQQASMVKELEN--HVLRCVRDQN 613
Query: 260 GNYVIQTALVETMRQ-------------DRLSVHQ---RLVTKLQQH 290
GN+VIQ A+ Q +RL+ H R++ ++ +H
Sbjct: 614 GNHVIQKAIERVPSQYVQFIINAFKGQVERLATHPYGCRVIQRMLEH 660
>gi|449273163|gb|EMC82771.1| Pumilio like protein 1, partial [Columba livia]
Length = 987
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 33/299 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 694 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 751
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFL 110
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 752 -AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------ 800
Query: 111 MMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
+ G+ V+ KC+E FI A L+ H GC + +++ +
Sbjct: 801 --DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPEQTLP 858
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
IL + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 859 ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEK 918
Query: 231 FLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQ 281
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H+
Sbjct: 919 CVTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHK 977
>gi|196010159|ref|XP_002114944.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
gi|190582327|gb|EDV22400.1| hypothetical protein TRIADDRAFT_28798 [Trichoplax adhaerens]
Length = 488
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + ++LM+ +G +V KF E + Q L+
Sbjct: 154 QHGSRFIQQKLERATTAEKQLVFNEIINSAYDLMTDVFGNYVIQKFFEFGSSEQKQLLAE 213
Query: 61 KI-----TFQDQLFLLASVDK-FGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTK 114
++ Q++ + K S V++ +VV + L HV+ +K +
Sbjct: 214 RVKGHVLPLALQMYGCRVIQKALESIPVEQQTEVVKE---LDGHVLKCVK--------DQ 262
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A + L+ H GC + +++ + + IL
Sbjct: 263 NGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQRILEHCTPEQTEPILDE 322
Query: 175 ISVNAASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ L + GNYV+QHVL LED I L G V+LS K S V++K
Sbjct: 323 LHEATEQLVLDQYGNYVIQHVLEHGRLEDK---SKIISKLTGKIVELSQHKFASNVIEKC 379
Query: 232 LKYQNAVHY--IVEELL--------NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ 281
+ + +VEE+ N+ + + D++ NYVIQ + D Q
Sbjct: 380 VSHSTKAERALLVEEVCSSHSDSNQNNSGLYTMMKDQFANYVIQKMI------DMADSPQ 433
Query: 282 R--LVTKLQQHLAALRVMKYG 300
R L+ K++ LR YG
Sbjct: 434 RKILIQKIRPFTGVLRKYTYG 454
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + + + H L LA GC + ++++ ++
Sbjct: 186 LMTDVFGNYVIQKFFEFGSSEQKQLLAERVKGHVLPLALQMYGCRVIQKALESIPVEQQT 245
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+++ + + + ++GN+VVQ + P + I A + LS G V+Q
Sbjct: 246 EVVKELDGHVLKCVKDQNGNHVVQKCIECVSPSALQFIINAFKKQVFSLSTHPYGCRVIQ 305
Query: 230 KFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ L++ I++EL + + Q+ D+YGNYVIQ L RL ++++KL
Sbjct: 306 RILEHCTPEQTEPILDELHEATE--QLVLDQYGNYVIQHVL----EHGRLEDKSKIISKL 359
Query: 288 QQHLAALRVMKYGSN 302
+ L K+ SN
Sbjct: 360 TGKIVELSQHKFASN 374
>gi|340507558|gb|EGR33501.1| pumilio-family RNA binding repeat protein [Ichthyophthirius
multifiliis]
Length = 361
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 34 MSGQYGRFVFGKFIE--SCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQ 91
M Q+G +V KF E S + ++LK D S+ +G V+K I+ +
Sbjct: 1 MKDQFGNYVIQKFFEKGSIQHKNMLFLVLKGKMGD-----LSLHTYGCRVVQKAIEELKD 55
Query: 92 SPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQ 151
P L ++ L + + G+ VI KC E + K FI +++ LA H
Sbjct: 56 FPELQEELLQELNNKIMICIQDQHGNHVIQKCFESINSQKLCFIITEVIQNIDTLAFHPY 115
Query: 152 GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFAL 211
GC + ++ + + +I + +N +L + + GNY++Q+++ + + D I +
Sbjct: 116 GCRVIQKILEFCQPNETSKIYENLLINLINLCKCQYGNYIIQYIIEKKPGYNRDNILNVV 175
Query: 212 RGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLN-------SDQILQVASDKYGNY 262
+ ++V LSL K S V +K L N + ++E L N +++ + +GNY
Sbjct: 176 KQNFVQLSLNKFASNVTEKSLFNSNDDYKMGVLEVLFNQLSNNYLDTGFIKLTKNAFGNY 235
Query: 263 VIQ 265
VIQ
Sbjct: 236 VIQ 238
>gi|351699059|gb|EHB01978.1| Pumilio-like protein 1 [Heterocephalus glaber]
Length = 1091
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALII 59
+ GS+++Q KL + +F + ++LM +G +V KF E +E +LAL
Sbjct: 763 QHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAE 822
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 823 ---RIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 878
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 879 VQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 938
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 939 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 998
Query: 240 --YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 999 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 1053
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 1054 ATLRKYTYG 1062
>gi|296482387|tpg|DAA24502.1| TPA: pumilio homolog 2 [Bos taurus]
Length = 370
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 138/325 (42%), Gaps = 40/325 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 36 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 95
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ ++ L HV+ +K +
Sbjct: 96 RIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 144
Query: 115 PGSSVILKCLEPSYNHKNDFIYQA-----ALEHCL---YLACHEQGCINLNNFIDNMKGS 166
G+ V+ KC+E FI A +C L+ H GC + +++
Sbjct: 145 NGNHVVQKCIECVQPQSLQFIIDAFKGQFISSNCFKVFVLSTHPYGCRVIQRILEHCTAE 204
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
+ IL + + L + + GNYV+QHVL P I +RG + LS K S
Sbjct: 205 QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASN 264
Query: 227 VVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSV 279
VV+K + + + +++E+ + + + D+Y NYV+Q + D
Sbjct: 265 VVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEP 318
Query: 280 HQR--LVTKLQQHLAALRVMKYGSN 302
QR ++ K++ H++ LR YG +
Sbjct: 319 AQRKIIMHKIRPHISTLRKYTYGKH 343
>gi|258571557|ref|XP_002544582.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904852|gb|EEP79253.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1139
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 66/302 (21%), Positives = 129/302 (42%), Gaps = 61/302 (20%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +YLQ KL + +F ELM+ +G ++ K +E N+ Q +I
Sbjct: 782 QHGCRYLQRKLEERIPENVQMIFLETHMHVVELMTDPFGNYLCQKLLEFSNDEQRTALIN 841
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
Q + ++++ G+ +++K+I+ ++ +P V++AL+ L+ G+ VI
Sbjct: 842 NAAPQ---LVSIALNQHGTRALQKMIEFIS-TPEQTQTVINALRGKVVELVQDLNGNHVI 897
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC L+ +SV A
Sbjct: 898 QKC------------------------------------------------LNRLSVADA 909
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ--NAV 238
+ GNYVVQ++L+L +P + +C G LS K S V++K + +
Sbjct: 910 ---QDPFGNYVVQYILDLAEPHFTEPLCQTFVGKVSMLSKQKFSSNVIEKCPRTAEFQSR 966
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMK 298
+++E+L + ++ ++ D + NYV+QTA+ + R++ L+ ++ L A+R
Sbjct: 967 RLLIQEMLPAQELERMLRDSFANYVVQTAMDYADPETRVA----LIEAIRPILPAIRQTP 1022
Query: 299 YG 300
+G
Sbjct: 1023 HG 1024
>gi|190345122|gb|EDK36946.2| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 150/323 (46%), Gaps = 33/323 (10%)
Query: 3 GSQYLQEKL-----SSGDSR--ILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 55
G ++LQ+K+ S+ R D +F VS +EL+ +G ++ K I C+E +
Sbjct: 118 GCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKLIAYCSEQNI 177
Query: 56 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
LI+ +++ LF + S+++ G+ +++K+I V+ L +++ L L+
Sbjct: 178 TLILESLSY--NLFQI-SINQHGTRALQKIIDAVSNKYQLTL-IVNGLSPYIIELIKDLN 233
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K L FIY + ++ L +A H+ GC L ++++ + Q I
Sbjct: 234 GNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVTTEQLSQFSARI 293
Query: 176 SVNA--ASLSRHRSGNYVVQHVLNLEDPFLIDAICFA--LRGHYVDLSLTKCGSFVVQKF 231
L + GNYV+Q+++++ I+ F +R +L K S VV+KF
Sbjct: 294 LTFEIFIKLINDQFGNYVLQYLISINS-LPINRAVFNNFVRFGVSNLCKLKFSSNVVEKF 352
Query: 232 LK--YQNAVHYIVEELLNSD---QIL-----QVASDKYGNYVIQTALVETMRQDRLSVHQ 281
LK + N L D QIL ++ +D YGNYV+QT L+E + V+
Sbjct: 353 LKNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPYGNYVVQT-LIEVI------VNA 405
Query: 282 RLVTKLQQHLAALRVMKYGSNKE 304
L +++ L + Y N E
Sbjct: 406 NFKEPLMENVMVLLPLNYRQNME 428
>gi|414885203|tpg|DAA61217.1| TPA: hypothetical protein ZEAMMB73_669990 [Zea mays]
Length = 484
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 2/137 (1%)
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
FI +A ++C LA G L N ++ + ++ I +S + L+++ GN++VQ
Sbjct: 308 FILKAVAQNCTRLAYQPDGLSLLQNCLERVSRKQKDDIFTQLSYQSLFLAQNSRGNWIVQ 367
Query: 194 HVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQI 251
VL DP ++ I LR HYV L+ K S VV+ L+ ++ I+ E +N
Sbjct: 368 DVLRKGDPSHVEIIASCLRNHYVTLAKNKYSSNVVEWCLRVFHEGERSVIICEFINYPHF 427
Query: 252 LQVASDKYGNYVIQTAL 268
+ +D++ N+ + TAL
Sbjct: 428 RDLVTDEFANFALSTAL 444
>gi|449681928|ref|XP_002162083.2| PREDICTED: uncharacterized protein LOC100200828, partial [Hydra
magnipapillata]
Length = 940
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 56/232 (24%), Positives = 107/232 (46%), Gaps = 7/232 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ GS+++Q+KL + +L+K +F + + LM+ +G +V KF E + Q L+
Sbjct: 691 QHGSRFIQQKLER--ASVLEKTMVFNEILSAAYSLMTDVFGNYVIQKFFEFGSPEQKLLL 748
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+I L ++ +G ++K ++ + P+ ++ L + + G+
Sbjct: 749 AQRIKGH---VLPLALQMYGCRVIQKALETIPSEIPIHGELVKELDGHVLKCVKDQNGNH 805
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ KC+E + + FI A L+ H GC + +++ + IL + +
Sbjct: 806 VVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRVIQRILEHCTQEQTAPILAELHEH 865
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
L + + GNYV+QHVL P I +RG+ + LS K S V++K
Sbjct: 866 TERLIQDQYGNYVIQHVLEHGSPEDKSTIVNIVRGNVLLLSQHKFASNVIEK 917
Score = 44.3 bits (103), Expect = 0.073, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 10/197 (5%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSR-- 167
LM G+ VI K E + + Q H L LA GC + ++ +
Sbjct: 723 LMTDVFGNYVIQKFFEFGSPEQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPSEIPI 782
Query: 168 RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
+++ + + + ++GN+VVQ + D + I A +G LS G V
Sbjct: 783 HGELVKELDGHVLKCVKDQNGNHVVQKCIECIDSTQLQFIIDAFQGQVYALSTHPYGCRV 842
Query: 228 VQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVT 285
+Q+ L++ Q I+ EL + ++ D+YGNYVIQ L +D+ ++ V
Sbjct: 843 IQRILEHCTQEQTAPILAEL--HEHTERLIQDQYGNYVIQHVLEHGSPEDKSTI----VN 896
Query: 286 KLQQHLAALRVMKYGSN 302
++ ++ L K+ SN
Sbjct: 897 IVRGNVLLLSQHKFASN 913
>gi|346327596|gb|EGX97192.1| Armadillo-type fold domain containing protein [Cordyceps militaris
CM01]
Length = 816
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 124/274 (45%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL S +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 445 QHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKILAE 504
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ + + SV + V+K ++ +V Q L + + R+ + + G+
Sbjct: 505 KMRGK---VVDLSVQVYACRVVQKALEHVLVEQQAALTKELDPEILRVIR----DQNGNH 557
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E DFI A LA H GC + +++ + +I+ + +
Sbjct: 558 VIQKIIELVPRQYIDFIMDAVRGQVTGLASHTYGCRVIQRMLEHGTDIDKLEIMTELHAS 617
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---- 234
A L + GNYV QHV+ P D + + + LS K S VV+K +++
Sbjct: 618 AQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTQQ 677
Query: 235 QNAVHYIVEELLNSD--QILQ-VASDKYGNYVIQ 265
Q + + + D LQ + D+YGNYVIQ
Sbjct: 678 QRSAIRVQLTTVGPDGTSPLQLMMRDQYGNYVIQ 711
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + + +++ + ++ I NA L + GNYV+Q +
Sbjct: 437 HIVEFSGDQHGSRFIQSKLESANSDEKDRVFCEIEPNAIQLMKDVFGNYVIQKFFEHGNQ 496
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ +RG VDLS+ VVQK L++ Q A + +EL +IL+V D
Sbjct: 497 VQKKILAEKMRGKVVDLSVQVYACRVVQKALEHVLVEQQAA--LTKEL--DPEILRVIRD 552
Query: 258 KYGNYVIQTALVETMRQ 274
+ GN+VIQ + RQ
Sbjct: 553 QNGNHVIQKIIELVPRQ 569
>gi|341899697|gb|EGT55632.1| CBN-PUF-8 protein [Caenorhabditis brenneri]
Length = 531
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 139/334 (41%), Gaps = 71/334 (21%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL D + D +F V EL+ +G +V KF E E A ++ +
Sbjct: 209 GSRFIQQKLEYCDKKEKDSIFDEVVANAAELVDDIFGNYVVQKFFEYGEEKHWAKLVDAV 268
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + + + ++K ++ V + PL +++ ++ + M + G+ V+ K
Sbjct: 269 VERVPEY---AFQMYACRVLQKALEKVNE--PLQIKILNKVRHVIYRCMKDQNGNHVVQK 323
Query: 123 CLE---PSY----------NHKNDF----------IYQAALEHCLYLACHEQGCINLNNF 159
+E P Y NHK F + Q LEHC+
Sbjct: 324 AIEKVGPEYIQFIVDTLLKNHKTVFDMSVDPYGCRVVQRCLEHCI--------------- 368
Query: 160 IDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVL----NLEDPFLIDAICFALRGHY 215
+ + I+ I ++ ++ GNYVVQHV+ + + F+I + L
Sbjct: 369 -----PKQTRPIIERILERFDEVTNNQYGNYVVQHVIQHGTDEDRMFIIKRVAEKL---- 419
Query: 216 VDLSLTKCGSFVVQKFLKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL 268
+ + K S V++K L+ H IV N + ++Q+ D+Y NYV+Q
Sbjct: 420 FEFATHKYSSNVIEKCLEEGTVYHKNMIVRSACNQPEGNMPVVVQMMKDQYANYVVQKMF 479
Query: 269 VETMRQDRLSVHQR--LVTKLQQHLAALRVMKYG 300
D+++ QR L+ ++ H+ LR +G
Sbjct: 480 ------DQVTTDQRRELIQTVRPHIPVLRQFPHG 507
>gi|401886820|gb|EJT50837.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
2479]
Length = 677
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + K+F + F LM+ +G +V K E + +Q A +I
Sbjct: 301 QHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKAALIK 360
Query: 61 KITFQDQLFLLASVDKFG---------SSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM 111
K+ Q LFL S +G + + K+VA+ L H++ +K +
Sbjct: 361 KMEGQ-ALFL--SNHMYGCRVMQTALEHARTEDRAKLVAE---LDGHIIECVKSSNANHV 414
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ + L L+P + FI H L+ H GC L + + + + +
Sbjct: 415 IQR------LITLDPPRGFMDAFI-----GHVRELSTHPFGCRVLQKSFEVLPPEKIRPL 463
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLED--PFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
L + + L ++ GNYVVQ V+ + D ++ DL K S VV+
Sbjct: 464 LDEMHTCSHELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTRIFDLCRHKFASNVVE 523
Query: 230 KFLKYQNAV--HYIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDR 276
K LK+ N ++ E++ D +I + D+YGN+ +QTAL E + R
Sbjct: 524 KALKHANPADKRELISEMIGDDSGENRIQTLLRDQYGNFPVQTALAEAEKDQR 576
>gi|312374345|gb|EFR21918.1| hypothetical protein AND_16037 [Anopheles darlingi]
Length = 1034
Score = 64.7 bits (156), Expect = 5e-08, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 23/213 (10%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + Q H L LA GC + ++++ +++
Sbjct: 665 LMTDVFGNYVIQKFFEFGSPEQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPPEQQQ 724
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+I+ + + + ++GN+VVQ + DP + I A R LS G V+Q
Sbjct: 725 EIVRELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQ 784
Query: 230 KFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL---VETMRQDRLSVH--- 280
+ L++ + + E N++Q++Q D+YGNYVIQ L + M +D+ + +
Sbjct: 785 RILEHCTPEQTAPILAELHANTEQLIQ---DQYGNYVIQHVLGTGLHVMMKDQYANYVVQ 841
Query: 281 ---------QR--LVTKLQQHLAALRVMKYGSN 302
QR L+ K++ H+ +L+ YG +
Sbjct: 842 KMIDVSEPTQRKVLLHKIRPHMNSLKKYTYGKH 874
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + G + LM+ +G +V KF E + Q +
Sbjct: 633 QHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNYVIQKFFEFGSPEQKQALAQ 692
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
++ L ++ +G ++K ++ + PP L HV+ +K
Sbjct: 693 QVKGH---VLPLALQMYGCRVIQKALESI---PPEQQQEIVRELDGHVLKCVK------- 739
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L+ H GC + +++ + I
Sbjct: 740 -DQNGNHVVQKCIECVDPVALQFIIDAFRNQVYSLSTHPYGCRVIQRILEHCTPEQTAPI 798
Query: 172 LHLISVNAASLSRHRSGNYVVQHVL 196
L + N L + + GNYV+QHVL
Sbjct: 799 LAELHANTEQLIQDQYGNYVIQHVL 823
Score = 42.4 bits (98), Expect = 0.30, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 4/129 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ G ++ + + I A +L GNYV+Q P
Sbjct: 625 HIVEFSQDQHGSRFIQQKLERATGPEKQLVFNEILGAAYNLMTDVFGNYVIQKFFEFGSP 684
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKY 259
A+ ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 685 EQKQALAQQVKGHVLPLALQMYGCRVIQKALESIPPEQQQEIVREL--DGHVLKCVKDQN 742
Query: 260 GNYVIQTAL 268
GN+V+Q +
Sbjct: 743 GNHVVQKCI 751
>gi|348675972|gb|EGZ15790.1| RNA-binding mating protein [Phytophthora sojae]
Length = 890
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 136/303 (44%), Gaps = 38/303 (12%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIE-SCNESQLALIILK 61
GS+++Q+KL D + + F + + LM+ +G +V KF+E + Q AL+ L
Sbjct: 560 GSRFIQQKLEKADEHVKAEAFSEIYPNSLLLMTDVFGNYVIQKFLEYGSADQQHALVELM 619
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGSS 118
+ L L +G +++ ++V + ++ +++L +M + + G+
Sbjct: 620 TSNMISLALQV----YGCRVIQRALEVT-----RVEEQLALIRQLKGHVMKCVVDQNGNH 670
Query: 119 VILKCLEPS-------YN----------HKNDFIYQAALEHCLYLACHEQGCINLNNFID 161
V+ KC+E + YN FI + + H L+ H GC + ++
Sbjct: 671 VLQKCIEAASWKRAAEYNGLGPQRFVTGEDIQFIIDSFIGHAAALSTHSYGCRVIQRVLE 730
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLT 221
+ ++ + +L+ I L + + GNYVVQHV++ +P D + A+ S
Sbjct: 731 HCAPAQIRPLLNEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRDIVMQAVLPEIARWSQH 790
Query: 222 KCGSFVVQKFLKY--QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMR 273
K S VV+ L++ + + IV+ +L D+ +L + YGNYV+Q L
Sbjct: 791 KYASNVVESCLEHATKGEISQIVDFILQCDESGASCPLLPMMKHMYGNYVVQKLLERADD 850
Query: 274 QDR 276
DR
Sbjct: 851 HDR 853
>gi|400597485|gb|EJP65218.1| pumilio domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 809
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +++F + +LM +G +V KF E N+ Q ++
Sbjct: 438 QHGSRFIQQKLETANSDEKEQVFREIEPNAIQLMKDVFGNYVVQKFFEHGNQVQKKILAE 497
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
K+ + + SV + V+K ++ +V Q L + + R+ + + G+
Sbjct: 498 KMRGK---VVDLSVQVYACRVVQKALEHVLVEQQAELTKELSPDIIRVIR----DQNGNH 550
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E DFI A LA H GC + ++ + + +I+ + +
Sbjct: 551 VIQKIIELVPRQYIDFIMDALRGQVTGLASHTYGCRVIQRMLEYGTETDKLEIMTELHAS 610
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L + GNYV QHV+ P D + + + LS K S VV+K +++
Sbjct: 611 AQILITDQYGNYVAQHVIQNGKPEDRDKLIQLVMSQLLTLSKHKFASNVVEKCIEHGTPA 670
Query: 239 H--YIVEELL-----NSDQILQVASDKYGNYVIQ 265
I E+L S + + D+YGNYVIQ
Sbjct: 671 QRSAIREQLTTVVSDGSSPLQLMMRDQYGNYVIQ 704
>gi|269864410|ref|XP_002651563.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064292|gb|EED42493.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 316
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+++Q +L S + + + F + F +L +G +V K I + ++
Sbjct: 39 QEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKEYDILCK 98
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F ++LL S +G ++KLI + + ++S L+ L+ + G+ VI
Sbjct: 99 R--FSGSIYLL-STHIYGCRVIQKLIDFITD----ITFIISELQDHILELIASPNGNHVI 151
Query: 121 LKCLEPSYNHKNDFIYQAAL---EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
KC++ S FI + C+ L+ GC L + + ++L +I
Sbjct: 152 QKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRLLGIIVD 211
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQKFLKYQN 236
N L R GNYV+QH+ ++ + I F + + V+LS K S V++K + N
Sbjct: 212 NIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCVV--N 267
Query: 237 AVHYIVEELL---------NSDQILQVASDKYGNYVIQTALVETM 272
A +E+ L N + + +D Y NYV+Q L++ M
Sbjct: 268 ASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQNFLIQLM 312
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 147 ACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
C +Q G + N +D+ G + I LS + GNYV+Q ++ L D
Sbjct: 35 VCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKEYD 94
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQ 265
+C G LS G V+QK + + + +I+ EL D IL++ + GN+VIQ
Sbjct: 95 ILCKRFSGSIYLLSTHIYGCRVIQKLIDFITDITFIISEL--QDHILELIASPNGNHVIQ 152
Query: 266 TAL 268
+
Sbjct: 153 KCI 155
>gi|340056635|emb|CCC50971.1| RNA-binding regulatory protein (fragment) [Trypanosoma vivax Y486]
Length = 540
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 135/316 (42%), Gaps = 45/316 (14%)
Query: 1 EEGSQYLQEKL--SSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ G ++LQ L S G+S + + + ELM+ QY F+ K +
Sbjct: 206 QHGCRHLQRLLGDSDGNSEVARVIMNEIVPHVAELMTDQYANFLVQKLFD---------- 255
Query: 59 ILKITFQDQLFLLAS-------VDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM 111
I+ + ++ +A+ + G+ SV+K+I+ ++ + + AL R L+
Sbjct: 256 IMPPDVRYKVAYVAAPKIADIALTPHGTFSVQKMIETISTREEMEI-IREALSRDVVRLV 314
Query: 112 MTKPGSSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ 170
G+ I K L+ ++H++ +FIY A C+ +A ++QGC L ++ ++R
Sbjct: 315 KDANGNHAIQKVLQ-RFDHEDKEFIYAAVGADCVPIAKNKQGCCVLQRCLEYASPTQRST 373
Query: 171 ILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
++ I ++ GNYV+Q+VL + ID I A H L L +
Sbjct: 374 LVKHILDCCLQIAEDPYGNYVLQYVLQSGNNTTIDTIAIAFLPH---LPLVR-------- 422
Query: 231 FLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
VE + + ++ D +GNYV+QTAL + + + LV L+
Sbjct: 423 --------EMYVETMCTPEVAARLIQDDFGNYVLQTALTRST----PAQAEALVAVLRPL 470
Query: 291 LAALRVMKYGSNKEIQ 306
+ +R Y E +
Sbjct: 471 MPTIRSTPYAKKLEAK 486
>gi|67484574|ref|XP_657507.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56474760|gb|EAL52117.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702146|gb|EMD42840.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 439
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 142/301 (47%), Gaps = 14/301 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q L++ + +LF + G +ELM+ +G +V KFIE N+ +L +
Sbjct: 133 QQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNYVVQKFIELGND-KLRQFVH 191
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I + L + +G ++K+I+ + + + +++ L+ + G+ VI
Sbjct: 192 SIIRGKVVELSKHI--YGCRVIQKIIEYSNTNEN--ERIFNEIEKSIIELIEDQNGNHVI 247
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E +Y + I A + H GC + I+ + QI + N
Sbjct: 248 QKIIE-NYWGCIEKILSALQGQIEKYSGHGFGCRVVQRIIEKRDNNFNYQIFQELQGNII 306
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
LS ++ GNYV+QH+L + + +AI + + + SL K S V++K +++ N
Sbjct: 307 VLSLNQFGNYVIQHLLEFGNDTIREAIINEVENVFFESSLLKFSSNVMEKCVQFGPSNKQ 366
Query: 239 HYIVEELL--NSDQILQVASDKYGNYVIQTALVETMRQDRLSVH----QRLVTKLQQHLA 292
++++L + D+I ++ D + NYV+Q RL + QR + L++++
Sbjct: 367 QLLIKKLFDCDDDKIYKMMKDPFANYVLQRMFTMMNNDQRLQFYTSYVQRNINSLRKNIY 426
Query: 293 A 293
A
Sbjct: 427 A 427
>gi|406698770|gb|EKD01997.1| RNA binding protein Pumilio [Trichosporon asahii var. asahii CBS
8904]
Length = 711
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 127/293 (43%), Gaps = 34/293 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + K+F + F LM+ +G +V K E + +Q A +I
Sbjct: 335 QHGSRFIQNKLETASPEERQKVFEEILPNAFSLMTDVFGNYVIQKLFEHGDAAQKAALIK 394
Query: 61 KITFQDQLFLLASVDKFG---------SSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM 111
K+ Q LFL S +G + + K+VA+ L H++ +K +
Sbjct: 395 KMEGQ-ALFL--SNHMYGCRVMQTALEHARTEDRAKLVAE---LDGHIIECVKSSNANHV 448
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ + L L+P + FI H L+ H GC L + + + + +
Sbjct: 449 IQR------LITLDPPRGFMDAFI-----GHVRELSTHPFGCRVLQKSFEVLPPEKIRPL 497
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLED--PFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
L + + L ++ GNYVVQ V+ + D ++ DL K S VV+
Sbjct: 498 LDEMHTCSHELMINQFGNYVVQSVITEGEGRKHDRDLAVAEIKTRIFDLCRHKFASNVVE 557
Query: 230 KFLKYQNAV--HYIVEELLNSD----QILQVASDKYGNYVIQTALVETMRQDR 276
K LK+ N ++ E++ D +I + D+YGN+ +QTAL E + R
Sbjct: 558 KALKHANPADKRELISEMIGDDSGENRIQTLLRDQYGNFPVQTALAEAEKDQR 610
>gi|123454731|ref|XP_001315116.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121897783|gb|EAY02893.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 410
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 23/272 (8%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
LQE++ D +F V+ +L+ F+ K E NE Q ++
Sbjct: 104 LQEQIDHATPAERDTIFNVLYPHMGDLVCDGAANFLIQKLCEYLNEEQQTRMLA------ 157
Query: 67 QLFLLASVDKF-----GSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
F + V + G ++K I+ SP + + AL F L ++ G+ +
Sbjct: 158 --FFMEDVQRIVDHPNGCRVLQKFIESTT-SPSNIDPIFLALLPRFVELCSSQNGNHIAQ 214
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAAS 181
+ + D I + H L GC + D + ++ + A +
Sbjct: 215 RFIIKIPQRVPDIINKIKT-HVYDLVVDNWGCRVIQQLFDRLPIQELIPLVDEVLCRAET 273
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--VH 239
L+ ++ GNYVVQ++LN P I A+ A GH+ + S+ K S V++K ++ N +
Sbjct: 274 LATNQFGNYVVQNILNSGTPEHIQALIDAFTGHFYEFSMHKFASNVIEKCIRKANPQQQN 333
Query: 240 YIVEELL------NSDQILQVASDKYGNYVIQ 265
I E++ N +I ++ SD++GNYVIQ
Sbjct: 334 MIFTEIIGPEGNYNRPRIKEMVSDQFGNYVIQ 365
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 149 HEQGCINLNNFIDNMKG-SRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAI 207
H GC L FI++ S I + L ++GN++ Q + ++ P + I
Sbjct: 169 HPNGCRVLQKFIESTTSPSNIDPIFLALLPRFVELCSSQNGNHIAQRFI-IKIPQRVPDI 227
Query: 208 CFALRGHYVDLSLTKCGSFVVQKF---LKYQNAVHYIVEELLNSDQILQVASDKYGNYVI 264
++ H DL + G V+Q+ L Q + +V+E+L + L A++++GNYV+
Sbjct: 228 INKIKTHVYDLVVDNWGCRVIQQLFDRLPIQELIP-LVDEVLCRAETL--ATNQFGNYVV 284
Query: 265 QTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
Q L + Q L+ H + K+ SN
Sbjct: 285 QNILNSGTPEHI----QALIDAFTGHFYEFSMHKFASN 318
>gi|28804566|dbj|BAC57980.1| Pumilio [Xenopus laevis]
Length = 1185
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 857 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 914
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 915 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 972
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 973 VQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 1032
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1033 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1092
Query: 240 --YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1093 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1147
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 1148 ATLRKYTYG 1156
>gi|146423478|ref|XP_001487667.1| hypothetical protein PGUG_01044 [Meyerozyma guilliermondii ATCC
6260]
Length = 618
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 149/323 (46%), Gaps = 33/323 (10%)
Query: 3 GSQYLQEKL-----SSGDSR--ILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 55
G ++LQ+K+ S+ R D +F VS +EL+ +G ++ K I C+E +
Sbjct: 118 GCRFLQKKIDEHVVSNAQQRRANFDVIFSQVSPNMYELIIDPFGNYLVQKLIAYCSEQNI 177
Query: 56 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
LI+ + + LF + S+++ G+ +++K+I V+ L +++ L L+
Sbjct: 178 TLILESLLY--NLFQI-SINQHGTRALQKIIDAVSNKYQLTL-IVNGLSPYIIELIKDLN 233
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K L FIY + ++ L +A H+ GC L ++++ + Q I
Sbjct: 234 GNHVIQKILNKYPADDCQFIYDSIIKDLLVVATHKHGCCVLQKCLNHVTTEQLSQFSARI 293
Query: 176 SVNA--ASLSRHRSGNYVVQHVLNLEDPFLIDAICFA--LRGHYVDLSLTKCGSFVVQKF 231
L + GNYV+Q+++++ I+ F +R +L K S VV+KF
Sbjct: 294 LTFEIFIKLINDQFGNYVLQYLISINS-LPINRAVFNNFVRFGVSNLCKLKFSSNVVEKF 352
Query: 232 LK--YQNAVHYIVEELLNSD---QIL-----QVASDKYGNYVIQTALVETMRQDRLSVHQ 281
LK + N L D QIL ++ +D YGNYV+QT L+E + V+
Sbjct: 353 LKNCFNNEPISDAFSCLKYDLCYQILISDLNKMINDPYGNYVVQT-LIEVI------VNA 405
Query: 282 RLVTKLQQHLAALRVMKYGSNKE 304
L +++ L + Y N E
Sbjct: 406 NFKEPLMENVMVLLPLNYRQNME 428
>gi|195653665|gb|ACG46300.1| hypothetical protein [Zea mays]
Length = 238
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 11/194 (5%)
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 172
+ G+ VI KC+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I L++ + GNYV QHVL I L G V +S K S V++K
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 233 KYQNA------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
++ + + IVE+ ++ +L + D+Y NYV+ L ET +D+ + L++
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLAMMKDQYANYVVHKIL-ETCNEDQREL---LLSH 199
Query: 287 LQQHLAALRVMKYG 300
++ H+ ALR YG
Sbjct: 200 VKDHMQALRKYTYG 213
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMQCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 223 CGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
G V+Q+ L++ + I++E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 280 HQR--LVTKLQQHLAALRVMKYGSN 302
H+R ++TKL + + KY SN
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASN 137
>gi|426200142|gb|EKV50066.1| hypothetical protein AGABI2DRAFT_199387 [Agaricus bisporus var.
bisporus H97]
Length = 423
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 50/328 (15%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWV----VSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
GS+++Q KL LDK+ V V + +LM +G +V K ++ + Q A
Sbjct: 105 GSRFIQTKLEGAG---LDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDFGTQDQRAG- 160
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLY----HVMSALKR------L 106
L ++++ L S++ +G V+K+I++ Q L+ HV++ +K +
Sbjct: 161 -LARLVENEIVDL-SLNVYGCRVVQKVIELCTAEQQTQLVRKIEPHVLTVVKDTNGNHVI 218
Query: 107 FKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 166
KF+M P L+ AA + LA H GC L ++ +
Sbjct: 219 QKFVMTVSPERLSFLRTFR-----------DAARQ----LAIHPYGCRVLQRCLEYLPND 263
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
+ ++ + A SL + + GNYVVQ++L P I ++G + +S K S
Sbjct: 264 YCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASN 323
Query: 227 VVQKFLKYQNAVHY--IVEELLN----SDQILQVASDKYGNYVIQTALVETMRQDRLSVH 280
VV+K L N +V+E+L D + + D YGNYVIQTAL + + R
Sbjct: 324 VVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTALNQVDSEQR---- 379
Query: 281 QRLVTKLQQHLAALRVMKYGSNKEIQKK 308
+ L +++ HL ++ K+ +I+ K
Sbjct: 380 ELLYARVRSHLISI---KHEPRPKIEPK 404
>gi|148229513|ref|NP_001081119.1| pumilio homolog 1 [Xenopus laevis]
gi|51513460|gb|AAH80379.1| Pum1-A protein [Xenopus laevis]
Length = 1190
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 862 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 919
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 920 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPPDQQVINEMVRELDGHVLKCVKDQNGNHV 977
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 978 VQKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHT 1037
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1038 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 1097
Query: 240 --YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 1098 RAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHI 1152
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 1153 ATLRKYTYG 1161
>gi|335892195|pdb|2YJY|A Chain A, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
gi|335892196|pdb|2YJY|B Chain B, A Specific And Modular Binding Code For Cytosine
Recognition In Puf Domains
Length = 350
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 135/316 (42%), Gaps = 30/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 34 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 93
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ + L HV+ +K +
Sbjct: 94 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------DQ 142
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 143 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE 202
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + G+YV++HVL P I +RG+ + LS K S VV+K + +
Sbjct: 203 LHQHTEQLVQDQYGSYVIRHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTH 262
Query: 235 QNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ +++E+ + + + D+Y NYV+Q + V Q ++ +H K
Sbjct: 263 ASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----K 317
Query: 287 LQQHLAALRVMKYGSN 302
++ H+A LR YG +
Sbjct: 318 IRPHIATLRKYTYGKH 333
>gi|397646257|gb|EJK77194.1| hypothetical protein THAOC_00992 [Thalassiosira oceanica]
Length = 743
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 16/169 (9%)
Query: 131 KNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNY 190
+ FI+ A +A H GC + +D+ + R ++ I + L + GNY
Sbjct: 396 RTQFIFDAVAASVEDVARHRHGCCVIQRCLDSRHSAARSHLVDRIVEKSLELMQDAYGNY 455
Query: 191 VVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN--- 247
VVQ+VL++ + AIC ++ G L++ K S V++K L + + EE LN
Sbjct: 456 VVQYVLDVCGDDEVHAICESVVGKVCVLAVQKFSSNVMEKCL--ERCTDRVREEYLNELN 513
Query: 248 -SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQ---RLVTKLQQHLA 292
SD++ ++ D +GNYV+Q AL +S H RLV ++ HL+
Sbjct: 514 DSDRLRELMMDPFGNYVVQRAL-------SVSTHAQAIRLVETMKPHLS 555
>gi|448514914|ref|XP_003867201.1| Puf3 protein [Candida orthopsilosis Co 90-125]
gi|380351540|emb|CCG21763.1| Puf3 protein [Candida orthopsilosis]
Length = 769
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 138/296 (46%), Gaps = 15/296 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +F + +F+LM+ +G +V K+ E + Q +++
Sbjct: 460 QHGSRFIQTKLPQASDEEKEVIFKEICDISFDLMTDVFGNYVMQKYFEYGSIEQKQILLQ 519
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ ++ L S+ +G V++ ++ + + P ++ L+ + + VI
Sbjct: 520 KML--GHIYEL-SLQTYGCRVVQRALESLEE--PDQLKIILELQDKVLVCATDQNSNHVI 574
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E K FI H +L + GC + I + +++I I + +
Sbjct: 575 QKSIELIPFDKVRFISDVLQTHFYHLCTDQYGCRVVQRLIHFGNDNDKQEIYTEIKDHVS 634
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF--LKYQNAV 238
L H+ GNYVVQ LE+ I + + + K S V +K L Q+ +
Sbjct: 635 FLITHKFGNYVVQAC--LENSLRESEIFTTVVSKFTHFATNKYASNVCEKLVDLATQSQI 692
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQ--TALVETMRQDRLSVHQRLVTKLQQHLA 292
I+E ++ +++ ++ D+YGNYV+Q ++++ D+ ++LV KLQQ L+
Sbjct: 693 QQILEVVMQGNELERIMGDEYGNYVVQKIVSVLDGNSPDK----KKLVVKLQQLLS 744
>gi|17224452|gb|AAL36981.1|AF272350_1 translational repressor pumilio [Homo sapiens]
Length = 876
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 133/315 (42%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 550 QHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALAT 609
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ ++ L HV+ +K +
Sbjct: 610 RIRGH---VLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVK--------DQ 658
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 659 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPILEE 718
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG + LS K S VV+K + +
Sbjct: 719 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASNVVEKCVTH 778
Query: 235 QNAVHY--IVEELLNSDQILQVA-----SDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + A D+Y NYV+Q + D QR ++
Sbjct: 779 ASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 832
Query: 286 KLQQHLAALRVMKYG 300
K++ H+ LR YG
Sbjct: 833 KIRPHITTLRKYTYG 847
>gi|405118729|gb|AFR93503.1| pumilio 2 [Cryptococcus neoformans var. grubii H99]
Length = 601
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 126/286 (44%), Gaps = 37/286 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL KLF + ++LM+ +G +V K E ++ Q A +
Sbjct: 233 QHGSRFIQQKLEIATPEDRQKLFDEIYPNAYQLMTDVFGNYVTQKMFEHGDQLQKAALAK 292
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLI---------KVVAQSPPLLYHVMSALKRLFKFLM 111
K+ D L S+ +G V+K + K+VA+ P H++ +K
Sbjct: 293 KM---DGRVLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEP---HILECVK------- 339
Query: 112 MTKPGSSVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
+ + V+ + + P + + FI H LA H GC L +N+ ++
Sbjct: 340 -SSNANHVVQRMINIGPPQSIPDSFI-----GHVEELAKHPYGCRVLQKTFENLDDKMKR 393
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+L + SL+ + GNYV+Q V+ + + + L+G + K S VV+
Sbjct: 394 SLLDEMHKCVISLTEDQFGNYVIQSVITVGKSEDRNKVVDQLKGRITTFARHKFASNVVE 453
Query: 230 KFLKYQNAV--HYIVEELL-----NSDQILQVASDKYGNYVIQTAL 268
K L + + +++EL+ ++Q+ + D Y N+ +QT +
Sbjct: 454 KALIHADPADRRALIDELIGMQPDGTNQVGMLLRDAYANFPLQTGM 499
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
L L+ GC + +D++ +R +I+ + + + + N+VVQ ++N+ P
Sbjct: 298 VLQLSMQMYGCRVVQKALDHLLNEQRAKIVAELEPHILECVKSSNANHVVQRMINIGPP- 356
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQ--ILQVASDKYG 260
+I + GH +L+ G V+QK ++N + LL+ ++ + D++G
Sbjct: 357 --QSIPDSFIGHVEELAKHPYGCRVLQK--TFENLDDKMKRSLLDEMHKCVISLTEDQFG 412
Query: 261 NYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
NYVIQ+ + +DR ++V +L+ + K+ SN
Sbjct: 413 NYVIQSVITVGKSEDR----NKVVDQLKGRITTFARHKFASN 450
>gi|193788405|dbj|BAG53299.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 136/309 (44%), Gaps = 18/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 597 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 654
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ + LA + +G ++K ++ + ++ ++ L + + G+ V
Sbjct: 655 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHV 712
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+ KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 713 VQKCVECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHT 772
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 773 EQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTE 832
Query: 240 --YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHL 291
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+
Sbjct: 833 RAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHI 887
Query: 292 AALRVMKYG 300
A LR YG
Sbjct: 888 ATLRKYTYG 896
>gi|167392498|ref|XP_001740184.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165895862|gb|EDR23451.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 437
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 133/282 (47%), Gaps = 20/282 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ +D++F ++ + ELM +G +V K +E + + L+
Sbjct: 128 QQGSRKIQQFFEIATEEEIDQIFRLIYSDSIELMIDLFGNYVIQKLLEHGTKKHVHLLFE 187
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ Q + L S+ +G ++K+++V++ + + + +K + + G+ VI
Sbjct: 188 KL--QGNVVKL-SLHMYGCRVIQKILEVLSSEEVRI--ISAEIKSNVSTFIEDQNGNHVI 242
Query: 121 LKCL----EPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K + E N D IY A+E+ + H GC + I+ + K++ +
Sbjct: 243 QKFIDFASEIDLNFMIDEIYTKAVEY----SKHPYGCRVIQRLIEKNSQNCVKRVTDKLV 298
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
LS ++ GNYV+QH++ I ++G + S+ K S VV+K ++
Sbjct: 299 EYVWELSINQYGNYVIQHLIQYGTNEQRIKIVNNIKGKLYEYSMKKYSSNVVEKCIRCCE 358
Query: 237 AVHYI--VEELLNSD----QILQVASDKYGNYVIQTALVETM 272
+ I V EL NS+ QI ++ D Y NYVIQ L+E M
Sbjct: 359 SREQIILVNELCNSNVTNKQINEMICDPYANYVIQ-RLIEMM 399
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM+ G+ VI K LE +++ + + L+ H GC + ++ + +
Sbjct: 160 LMIDLFGNYVIQKLLEHGTKKHVHLLFEKLQGNVVKLSLHMYGCRVIQKILEVLSSEEVR 219
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
I I N ++ ++GN+V+Q ++ ++ + + V+ S G V+Q
Sbjct: 220 IISAEIKSNVSTFIEDQNGNHVIQKFIDFASEIDLNFMIDEIYTKAVEYSKHPYGCRVIQ 279
Query: 230 KFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ ++ QN V + ++L+ + + +++ ++YGNYVIQ + + R+ ++V +
Sbjct: 280 RLIEKNSQNCVKRVTDKLV--EYVWELSINQYGNYVIQHLIQYGTNEQRI----KIVNNI 333
Query: 288 QQHLAALRVMKYGSN 302
+ L + KY SN
Sbjct: 334 KGKLYEYSMKKYSSN 348
>gi|392595849|gb|EIW85172.1| ARM repeat-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 378
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 136/306 (44%), Gaps = 24/306 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL S S ++F +V T L +G +V K E + +Q+
Sbjct: 66 QHGSRFIQQKLESASSDEKQRIFDEIVPSHTLALSQDVFGNYVIQKLFE--HGTQIQKSA 123
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
L T + + L S+ +G ++K I+ + Q + + L R K G+
Sbjct: 124 LANTLEGHVLPL-SLQMYGCRVIQKAIEFILPEQQGKFVRELEPHLARCVK----DANGN 178
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E K F++ + +Y L+ H GC L ++++ + ++ +
Sbjct: 179 HVIQKLIERVAADKLGFVH--SFRGNVYDLSTHPYGCRVLQRCLEHLPDDMTRSLMDELH 236
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
+L + + GNYVVQ VL P + LRG ++++ K S V +K L N
Sbjct: 237 KYVINLMQDQFGNYVVQFVLEKCQPHDRSLVITKLRGQLLNMARHKFASNVCEKALVTAN 296
Query: 237 --AVHYIVEELLNS-----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+++E++ I+ + D+Y NYV+Q AL + + + L K++
Sbjct: 297 YDERRTLIDEIITPKADGVSPIVSMMKDQYANYVLQRALTVAEGEQK----EILANKIRP 352
Query: 290 HLAALR 295
L A+R
Sbjct: 353 QLTAMR 358
>gi|440302948|gb|ELP95254.1| hypothetical protein EIN_430600 [Entamoeba invadens IP1]
Length = 452
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 143/314 (45%), Gaps = 23/314 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + LQ+KL D +D+++ + L++ Q+G ++ K IE ++ Q L ILK
Sbjct: 143 GCRCLQKKLEDDDDDAIDEIYERMLPIMNNLIADQFGNYLCQKLIEVVDDEQ-RLDILKC 201
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ + S + G+ SV+K+I + ++S + L+ G+ VI +
Sbjct: 202 VSNN--IGIISKNIHGTRSVQKMINCATTKAEIDELILSLSPHIVD-LVFDGNGNHVIQE 258
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLAC-HEQGCINLNNFID-NMKGSRRKQILHLISVNAA 180
CL+ +N FI+ L C H+ GC + ID +G K + +IS N
Sbjct: 259 CLKTFSKEQNKFIFDGILGDSFVEICEHKHGCCVVQRCIDFGNRGQLNKLVDKVIS-NTL 317
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVD----LSLTKCGSFVVQKFLKYQ- 235
+ GNYVVQ++L ++ +D +C + +D LS K S V+++ +
Sbjct: 318 EIITDPYGNYVVQYILKVD----VDHVCMDVTKIILDDLIVLSTQKFSSNVIEQLVMSDE 373
Query: 236 -NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+ ++ L + ++ + NYVIQT L + R+ H +L + H+ ++
Sbjct: 374 VGVKELMFDKFLQYKDVERLLQGSFSNYVIQTCLENSSRE----YHVKLSNWILPHIDSI 429
Query: 295 RVMKYGSNKEIQKK 308
+ + Y K+IQ K
Sbjct: 430 KNISY--YKKIQTK 441
>gi|448103094|ref|XP_004199945.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359381367|emb|CCE81826.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 148/309 (47%), Gaps = 29/309 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + FELM+ +G +V K+ E N+ Q +++
Sbjct: 479 QHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQKEVLL- 537
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
+ ++ L S+ +G V++ ++ + ++ +S ++ L +++ + G+
Sbjct: 538 -DCMKGHIYTL-SMQMYGCRVVQRALEAIK-----VHQQISIIEELKDHILVCAKDQNGN 590
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + F+ +A +L+ H GC + ++ +++IL ++
Sbjct: 591 HVIQKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEYSSPDDQRKILDELNR 650
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN- 236
L + + GNYV+QH+L + I + G V+ S K S V++K +KY +
Sbjct: 651 FIFYLIQDQYGNYVMQHILERGSCEDREEILKVVLGSVVNFSKHKFASNVIEKCIKYGDF 710
Query: 237 -AVHYIVEELL--NSDQILQVAS----------DKYGNYVIQTALVETMRQDRLSVHQR- 282
I++E++ N D ++V D+Y NYVIQ LVE D S ++
Sbjct: 711 EQRKRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGF--DAQSEEKKI 767
Query: 283 LVTKLQQHL 291
LV KL+Q+L
Sbjct: 768 LVVKLRQYL 776
>gi|213402511|ref|XP_002172028.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
gi|212000075|gb|EEB05735.1| meiotic coiled-coil protein [Schizosaccharomyces japonicus yFS275]
Length = 670
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 144/325 (44%), Gaps = 47/325 (14%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++ S +LQ+KL I + + + LM ++G F ++ C E +
Sbjct: 346 QQASVFLQQKLKVAAPAIKHSIIDTILEQAYPLMLNRFGNF----LVQRCFEHGWPQHVR 401
Query: 61 KI--TFQDQLFLLASVDKFGSSSVKKLIKVVAQS------PPLLYHVMSAL--------- 103
I T LA+ D FG V+K + V + L H+ S +
Sbjct: 402 AIGETILGHALQLAT-DPFGCHVVQKALDNVTEDIKLAILDELFVHIGSTITHHYACHVW 460
Query: 104 KRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM 163
++LF+ + ++ GS+++ + ND + E +A E G + + N +N
Sbjct: 461 QKLFE-VRWSECGSNLMTRV--------NDALRGKWAE----IALGENGSLVVQNMFENC 507
Query: 164 KGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKC 223
+++ + + N +++R + GN+V+QH+L P +D + L D S+ +
Sbjct: 508 VEEDKRECIEEVISNLDTIARGQWGNWVIQHMLENGHPKDLDRVTTLLLAKAADYSVDQY 567
Query: 224 GSFVVQKFLK--YQNAVHYIVEELLNS------DQILQVASDKYGNYVIQTALVETMRQD 275
S V++K +K N + + ++ + ++ +ASD+YGNY++Q L Q+
Sbjct: 568 ASKVIEKAIKIGSNNFIPRYLTQVTTTRVNRTRQPLVDIASDQYGNYLVQQILQVAQPQE 627
Query: 276 RLSVHQRLVTKLQQHLAALRVMKYG 300
+ + +V +++H+ +LR KYG
Sbjct: 628 K----EVVVRHIKKHMVSLRGSKYG 648
>gi|28394605|gb|AAO38522.1| pumilio RBD [Schistocerca americana]
Length = 322
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 5/234 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ G +++Q+KL +F + + LM+ +G +V KF E Q +
Sbjct: 66 QHGPRFIQQKLERATVAEKQMVFSEILAAAYNLMTDVFGNYVIQKFFEFGTPEQKTTLAQ 125
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ L ++ +G +++ ++ + SP ++ L + + G+ V+
Sbjct: 126 KVRGH---VLPLALQMYGCRVIQRALESI--SPEQQEEIVRELDGHVLKCVKDQNGNHVV 180
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E H FI A L+ H GC + +++ + IL + +
Sbjct: 181 QKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQRILEHCTPEQTAPILEELHRHTE 240
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
L + + GNYV+QHVL P I ++RG + LS K S VV+K + +
Sbjct: 241 QLIQDQYGNYVIQHVLEHGKPEDKSQIILSVRGKVLVLSQHKFASNVVEKCVTH 294
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + Q H L LA GC + ++++ +++
Sbjct: 98 LMTDVFGNYVIQKFFEFGTPEQKTTLAQKVRGHVLPLALQMYGCRVIQRALESISPEQQE 157
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+I+ + + + ++GN+VVQ + DP + I A G LS G V+Q
Sbjct: 158 EIVRELDGHVLKCVKDQNGNHVVQKCIECVDPHALQFIINAFSGQVFALSTHPYGCRVIQ 217
Query: 230 KFLKY--QNAVHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDR----LSVHQR 282
+ L++ I+EEL +++Q++Q D+YGNYVIQ L +D+ LSV +
Sbjct: 218 RILEHCTPEQTAPILEELHRHTEQLIQ---DQYGNYVIQHVLEHGKPEDKSQIILSVRGK 274
Query: 283 LVTKLQQHLAALRVMK 298
++ L QH A V++
Sbjct: 275 VLV-LSQHKFASNVVE 289
>gi|297282793|ref|XP_001096525.2| PREDICTED: pumilio homolog 1 isoform 3 [Macaca mulatta]
gi|332808250|ref|XP_001157224.2| PREDICTED: pumilio homolog 1 isoform 4 [Pan troglodytes]
gi|397515863|ref|XP_003828161.1| PREDICTED: pumilio homolog 1 isoform 2 [Pan paniscus]
gi|402853681|ref|XP_003891519.1| PREDICTED: pumilio homolog 1 isoform 2 [Papio anubis]
Length = 1044
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 16/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 716 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 775
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 776 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVV 832
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 833 QKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTE 892
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 893 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 952
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+A
Sbjct: 953 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHIA 1007
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 1008 TLRKYTYG 1015
>gi|448099238|ref|XP_004199094.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
gi|359380516|emb|CCE82757.1| Piso0_002501 [Millerozyma farinosa CBS 7064]
Length = 812
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 145/306 (47%), Gaps = 23/306 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + FELM+ +G +V K+ E N+ Q +++
Sbjct: 479 QHGSRFIQQKLPVSSDEEKEVIFNEIRDIAFELMTDVFGNYVIQKYFEHGNDVQKEVLL- 537
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ L S+ +G V++ ++ + +L ++ LK + G+ VI
Sbjct: 538 -DCMKGHIYTL-SMQMYGCRVVQRALEAIKVHQQIL--IIEELKDHILVCAKDQNGNHVI 593
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E + F+ +A +L+ H GC + ++ +++IL+ ++
Sbjct: 594 QKSIEKIPFKRIKFVLEALDNQIYHLSTHPYGCRVIQRLLEFSSPDDQRKILNELNRFIF 653
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
L + + GNYV+QH+L + I + G V+ S K S V++K +KY +
Sbjct: 654 YLIQDQYGNYVMQHILERGSYEDREEILKVVLGSVVNFSKHKFASNVIEKCIKYGDFEQR 713
Query: 239 HYIVEELL--NSDQILQVAS----------DKYGNYVIQTALVETMRQDRLSVHQR-LVT 285
I++E++ N D ++V D+Y NYVIQ LVE D S ++ LV
Sbjct: 714 KRILKEVMIGNEDFNVEVVGDDSPLALMMKDQYANYVIQK-LVEGF--DAQSEEKKILVV 770
Query: 286 KLQQHL 291
KL+Q+L
Sbjct: 771 KLRQYL 776
>gi|409082310|gb|EKM82668.1| hypothetical protein AGABI1DRAFT_53014, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 394
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 47/315 (14%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWV----VSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
GS+++Q KL LDK+ V V + +LM +G +V K ++ + Q A
Sbjct: 105 GSRFIQTKLEGAG---LDKIRVVYDEIVPLYAMKLMQDVFGNYVIQKLMDFGTQDQRAG- 160
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLY----HVMSALKR------L 106
L ++++ L S++ +G V+K+I++ Q L+ HV++ +K +
Sbjct: 161 -LARLVENEIVDL-SLNVYGCRVVQKVIELCTAEQQTQLVRKIEPHVLTVVKDTNGNHVI 218
Query: 107 FKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS 166
KF+M P L+ AA + LA H GC L ++ +
Sbjct: 219 QKFVMTVSPERLSFLRTFR-----------DAARQ----LAIHPYGCRVLQRCLEYLPND 263
Query: 167 RRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSF 226
+ ++ + A SL + + GNYVVQ++L P I ++G + +S K S
Sbjct: 264 YCRGMIDELHGIADSLMQDQFGNYVVQYILQHGQPHDCVIIAAQMKGSVLKMSRHKFASN 323
Query: 227 VVQKFLKYQNAVHY--IVEELLN----SDQILQVASDKYGNYVIQTALVETMRQDRLSVH 280
VV+K L N +V+E+L D + + D YGNYVIQTAL + + R
Sbjct: 324 VVEKVLVNANPETRFKLVDEILTIEHGVDPVHALMMDAYGNYVIQTALNQVDSEQR---- 379
Query: 281 QRLVTKLQQHLAALR 295
+ L +++ HL +++
Sbjct: 380 ELLYARVRSHLISIK 394
>gi|407040339|gb|EKE40075.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 435
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 10/206 (4%)
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFI 135
+FG +V+K+ + + + S + R +++ P ++ +++ L +N KN +
Sbjct: 205 QFGGYTVQKIAPFMRER---HIQIWSPILRNNIAILVIDPHANYVIQTLLKIFNEKNSYF 261
Query: 136 YQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 194
+ L+ C+ ++ + GC L + IDN + I + N L + + GN+V+QH
Sbjct: 262 FYGGLKDCVVRISKTKIGCSVLTHAIDNSTTQQINLIKPQLLSNCCDLIQDQYGNFVIQH 321
Query: 195 VLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQIL 252
++ DP +I I ++ V S K S VV+K LK +N +++ L D +
Sbjct: 322 LME-NDPTIISDIIQKIKDDVVFYSKQKFSSNVVEKCLKCSTENERQPLLDILSQPDSLD 380
Query: 253 QVASDKYGNYVIQT---ALVETMRQD 275
+ D+YGN+VIQ AL E +++
Sbjct: 381 ALVEDQYGNFVIQAFLDALPEKTKEE 406
>gi|299883578|emb|CBD70070.1| pumilio-related protein [Pelophylax lessonae]
Length = 1204
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 16/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 876 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 935
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 936 RIRGH---VLSLALQMYGCRVIQKALEFIPPDQQVINDMVRELDGHVLKCVKDQNGNHVV 992
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 993 QKCIECVQPQSLQFIIDAFKSQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTE 1052
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 1053 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 1112
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+A
Sbjct: 1113 AMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KIRPHIA 1167
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 1168 TLRKYTYG 1175
>gi|194390836|dbj|BAG62177.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 16/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 716 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 775
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 776 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVV 832
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 833 QKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTE 892
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 893 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 952
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+A
Sbjct: 953 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHIA 1007
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 1008 TLRKYTYG 1015
>gi|407035183|gb|EKE37585.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 439
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 140/301 (46%), Gaps = 14/301 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q L++ + +LF + G +ELM+ +G +V KFIE N+ +L +
Sbjct: 133 QQGSRRIQTFLTTAKDFEITELFDSIKGDLYELMNDLFGNYVVQKFIELGND-KLRQFVH 191
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
I + L S +G ++K+I+ + + + +++ L+ + G+ VI
Sbjct: 192 SIIRGKVVEL--SKHMYGCRVIQKIIEYSNTNEN--ERIFNEIEKSIIELIEDQNGNHVI 247
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E +Y + I A + H GC + I+ + QI + N
Sbjct: 248 QKIIE-NYWGCIEKILSALQGQIEKYSGHGFGCRVMQRIIEKRDNNFNNQIFQELQGNII 306
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
LS ++ GNYV+QH+L + + +AI + + SL K S V++K +++ N
Sbjct: 307 VLSMNQFGNYVIQHLLEFGNDTIREAIINEVEDVFFASSLLKFSSNVMEKCVQFGPSNKQ 366
Query: 239 HYIVEELLN--SDQILQVASDKYGNYVIQTALVETMRQDRLSVH----QRLVTKLQQHLA 292
++++L + D I ++ D + NYV+Q RL + QR + L++++
Sbjct: 367 QILIKKLFDCTDDMIYKMMKDPFANYVLQRMFTMMNNDQRLQFYTSYVQRNINSLRKNIY 426
Query: 293 A 293
A
Sbjct: 427 A 427
>gi|308510969|ref|XP_003117667.1| CRE-PUF-9 protein [Caenorhabditis remanei]
gi|308238313|gb|EFO82265.1| CRE-PUF-9 protein [Caenorhabditis remanei]
Length = 714
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 140/312 (44%), Gaps = 21/312 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL R +F V ELM+ +G +V KF E N Q L++
Sbjct: 369 QHGSRFIQQKLERASIRDKAVIFTPVLEHAEELMTDVFGNYVIQKFFEFGNNEQRNLLVG 428
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + LA + +G ++K ++ V + + ++ ++ + + G+ VI
Sbjct: 429 --TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVI 483
Query: 121 LKCLEPSYNHKNDFIYQAAL----EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K +E + FI A ++ L+ H GC + ++ +++ +L ++
Sbjct: 484 QKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQKQPVLDALN 543
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAIC-FALRGHYVDLSLTKCGSFVVQKFLKYQ 235
++ L + GNYV+QHV+ P + I + + + K S V++K L +
Sbjct: 544 LHLKQLVLDQYGNYVIQHVIEHGSPKDKEQIVQDVINDDLLKYAQHKFASNVIEKCLTFG 603
Query: 236 NAV--HYIVEELLN-----SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ I++++ S +LQ+ D + NYV+Q L Q R +++ ++
Sbjct: 604 GDAERNIIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR----KKITLTIK 659
Query: 289 QHLAALRVMKYG 300
H+A LR +G
Sbjct: 660 PHIATLRKYNFG 671
>gi|145538858|ref|XP_001455129.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422917|emb|CAK87732.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 131/271 (48%), Gaps = 25/271 (9%)
Query: 2 EGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILK 61
+G++Y +EK+ G ++D L L ++G +V K IE+CN++ LI +
Sbjct: 146 QGNEYQREKIFKG---LVDDLLL--------LSKHKFGNYVIQKIIENCNQNTRTLIFEQ 194
Query: 62 ITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVIL 121
+ + L S DKFG V+KL++ + + ++S +K L+ + G+ VI
Sbjct: 195 L---NSHVLEMSQDKFGCRVVQKLLEFILNQQKV--QLISQIKPYALKLIFDQCGNHVIQ 249
Query: 122 KCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI-LHLISVNAA 180
K ++ + +FI + + H GC ++ + +++ + LI +
Sbjct: 250 KIIDLVTDA--EFIIDLVTNNVDKVVSHPYGCRIAQKCLEIFPNDKLQELYISLIPL-CE 306
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
LS + GNY+VQH++N P + I ++ +++S K GS V ++++K + +
Sbjct: 307 RLSFCQYGNYIVQHMMNSGPPKGFEVIGKFIKSRIIEVSQDKYGSNVAERYIKLAQDDDI 366
Query: 239 HYIVEELLN---SDQILQVASDKYGNYVIQT 266
I + LLN +L + ++ +GNYV+Q
Sbjct: 367 ASICKILLNQTVPPMLLILINNSFGNYVMQN 397
>gi|269860161|ref|XP_002649803.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220066744|gb|EED44216.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 140/316 (44%), Gaps = 25/316 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+++Q +L S + + + F + F +L +G +V K I + ++
Sbjct: 203 QEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKEYDILCK 262
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F ++LL S +G ++KLI + + ++S L+ L+ + G+ VI
Sbjct: 263 R--FSGSIYLL-STHIYGCRVIQKLIDFITD----ITFIISELQDHILELIASPNGNHVI 315
Query: 121 LKCLEPSYNHKNDFIYQAAL---EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
KC++ S FI + C+ L+ GC L + + ++L +I
Sbjct: 316 QKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRLLGIIVD 375
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQKFLKYQN 236
N L R GNYV+QH+ ++ + I F + + V+LS K S V++K + N
Sbjct: 376 NIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCV--VN 431
Query: 237 AVHYIVEELL---------NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
A +E+ L N + + +D Y NYV+Q +T+ D + ++ K
Sbjct: 432 ASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQ-KFFDTVDDDLKMKMKAIIGKY 490
Query: 288 QQHLAALRVMKYGSNK 303
+ + A+ K+ NK
Sbjct: 491 LKDIKAIPFTKHILNK 506
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 145 YLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFL 203
+ C +Q G + N +D+ G + I LS + GNYV+Q ++ L
Sbjct: 197 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 256
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYV 263
D +C G LS G V+QK + + + +I+ EL D IL++ + GN+V
Sbjct: 257 YDILCKRFSGSIYLLSTHIYGCRVIQKLIDFITDITFIISEL--QDHILELIASPNGNHV 314
Query: 264 IQTAL 268
IQ +
Sbjct: 315 IQKCI 319
>gi|403293272|ref|XP_003937644.1| PREDICTED: pumilio homolog 1 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1044
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 16/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 716 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 775
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 776 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVV 832
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 833 QKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTE 892
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 893 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 952
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+A
Sbjct: 953 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHIA 1007
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 1008 TLRKYTYG 1015
>gi|296207290|ref|XP_002750600.1| PREDICTED: pumilio homolog 1 isoform 4 [Callithrix jacchus]
Length = 1044
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 133/308 (43%), Gaps = 16/308 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 716 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 775
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I L ++ +G ++K ++ + ++ ++ L + + G+ V+
Sbjct: 776 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVV 832
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 833 QKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEELHQHTE 892
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVH- 239
L + + GNYV+QHVL P I +RG+ + LS K S VV+K + + +
Sbjct: 893 QLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTER 952
Query: 240 -YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
+++E+ + A D+Y NYV+Q + V Q ++ +H K++ H+A
Sbjct: 953 AVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPGQRKIVMH-----KIRPHIA 1007
Query: 293 ALRVMKYG 300
LR YG
Sbjct: 1008 TLRKYTYG 1015
>gi|115479929|ref|NP_001063558.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|113631791|dbj|BAF25472.1| Os09g0497100 [Oryza sativa Japonica Group]
gi|215678529|dbj|BAG92184.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641849|gb|EEE69981.1| hypothetical protein OsJ_29881 [Oryza sativa Japonica Group]
Length = 988
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 20/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + D LF V ELM+ +G +V KF E + Q I
Sbjct: 663 QNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIAN 722
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ +F L S+ +G ++K ++V+ ++ ++ L + + G+ VI
Sbjct: 723 KLA--GHVFSL-SLQMYGCRVIQKALEVIDLEQKIV--LVGELDGHVLRCVHDQNGNHVI 777
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV--- 177
KC+E F+ + L+ H GC + ++ + S + L +I
Sbjct: 778 QKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILE--RCSNNSECLCIIDEILQ 835
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYVVQHVL + I L G V +S K S V+++ ++ +
Sbjct: 836 SACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGS 895
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
V I+++ ++ +L + D+Y NYV+Q L Q + + L+++++ HL
Sbjct: 896 AERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHK----EILLSRVKIHL 951
Query: 292 AALRVMKY 299
L+ Y
Sbjct: 952 PLLKKYTY 959
>gi|403364711|gb|EJY82128.1| Pumilio-family RNA binding protein [Oxytricha trifallax]
Length = 994
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 129/280 (46%), Gaps = 12/280 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ LQ L ++D + V LMS YG + K + S + SQ L+IL
Sbjct: 689 GSKQLQRYLEKAPPELVDFIISEVVSELHNLMSDLYGNYFCQKLMTSAS-SQQRLVIL-T 746
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+ L+ + S DK G+ S++ +I ++ P + + + + + V+ K
Sbjct: 747 ELRPNLYKI-SCDKKGTHSMQCMIDMINM-PEEQHEIQEGVVNHILDMAYDINANHVLQK 804
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK-QILHLISVNAAS 181
+ K DFIYQ +++ + L+ + G + I + + +I HL++ +A
Sbjct: 805 IMVCFKEEKLDFIYQPIMKYFIELSMDQNGLCVIKKLIGKITNEDKILEIQHLLAEHAVK 864
Query: 182 LSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK---YQNAV 238
L ++ GNY VQ + + D + I L H + LS+ K S V++K L+ Y+
Sbjct: 865 LVQNPYGNYAVQQAIEVWDVRYCEPIFEKLEDHLMQLSVQKFSSNVIEKILEKASYETVD 924
Query: 239 HYIVEELLNSDQILQVASDKYGNYVIQT---ALVETMRQD 275
Y+ +L N + + + + YG YVI ++ET R++
Sbjct: 925 RYM-RKLCNVEVMKSLIKNIYGYYVINKLVLIVIETHRRN 963
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 114/253 (45%), Gaps = 44/253 (17%)
Query: 70 LLASVDKFGSSSVKKLIKVVAQSPP-----LLYHVMSALKRLFKFL--------MMTKPG 116
++ S ++GS K+L + + ++PP ++ V+S L L L +MT
Sbjct: 681 VVMSKQQYGS---KQLQRYLEKAPPELVDFIISEVVSELHNLMSDLYGNYFCQKLMTSAS 737
Query: 117 SS---VILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQIL 172
S VIL L P+ LY ++C ++G ++ ID + + +
Sbjct: 738 SQQRLVILTELRPN----------------LYKISCDKKGTHSMQCMIDMINMPEEQHEI 781
Query: 173 HLISVNAA-SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
VN ++ + N+V+Q ++ +D I + ++++LS+ + G V++K
Sbjct: 782 QEGVVNHILDMAYDINANHVLQKIMVCFKEEKLDFIYQPIMKYFIELSMDQNGLCVIKKL 841
Query: 232 L-KYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQ 289
+ K N + + L ++ +++ + YGNY +Q A+ V +R + + KL+
Sbjct: 842 IGKITNEDKILEIQHLLAEHAVKLVQNPYGNYAVQQAIEVWDVR-----YCEPIFEKLED 896
Query: 290 HLAALRVMKYGSN 302
HL L V K+ SN
Sbjct: 897 HLMQLSVQKFSSN 909
>gi|268579547|ref|XP_002644756.1| C. briggsae CBR-PUF-9 protein [Caenorhabditis briggsae]
Length = 709
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 142/316 (44%), Gaps = 29/316 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL R +F V ELM+ +G +V KF E N Q L++
Sbjct: 354 QHGSRFIQQKLERASPRDKAVIFTPVLENAEELMTDVFGNYVIQKFFEFGNNEQRNLLVG 413
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + LA + +G ++K ++ V + + ++ ++ + + G+ VI
Sbjct: 414 --TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVI 468
Query: 121 LKCLEPSYNHKNDFIYQAAL----EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K +E + FI A ++ L+ H GC + ++ +++ +L +
Sbjct: 469 QKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCSDDQKQPVLDALH 528
Query: 177 VNAASLSRHRSGNYVVQHVL-----NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
++ L + GNYV+QHV+ + ++ + D I L + + K S V++K
Sbjct: 529 IHLKQLVLDQYGNYVIQHVIEHGSASDKEKIVQDVISDDL----LKFAQHKFASNVIEKC 584
Query: 232 LKYQNAV--HYIVEELLN-----SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
L Y + I++++ S +LQ+ D + NYV+Q L Q R +++
Sbjct: 585 LTYGGHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR----KKIT 640
Query: 285 TKLQQHLAALRVMKYG 300
++ H+A LR +G
Sbjct: 641 LTIKPHIATLRKYNFG 656
>gi|268562677|ref|XP_002646736.1| Hypothetical protein CBG13130 [Caenorhabditis briggsae]
Length = 514
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 25/311 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL D D +F V EL+ +G +V KF E E ++ +
Sbjct: 192 GSRFIQQKLEFCDINEKDAIFDEVVDNAAELVDDIFGNYVVQKFFEYGEEKHWTRLVDAV 251
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
D++ A + ++K ++ V + PL ++S ++ + M + G+ VI K
Sbjct: 252 V--DRVPEYA-FQMYACRVLQKALEKVNE--PLQIKILSQIRHVIHRCMKDQNGNHVIQK 306
Query: 123 CLEPSYNHKNDFIYQAALE---HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
+E FI +E + ++ GC + +++ S+ + I+ I
Sbjct: 307 AIEKVSPQYIQFIVNTLMENPDNIFDMSVDPYGCRVVQRCLEHCIASQTRPIIERIHERF 366
Query: 180 ASLSRHRSGNYVVQHVL--NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
++ ++ GNYVVQHV+ E L+ I + + D + K S V++K L+ + +
Sbjct: 367 DDIANNQYGNYVVQHVILHGTEADRLL--IVTRVSENLFDFASHKYSSNVIEKCLE-RGS 423
Query: 238 VHY---IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+H+ IV + ++Q+ D+Y NYV+Q + + R + L+ ++
Sbjct: 424 IHHKNIIVRAACSQPDGTMPIVVQMMKDQYANYVVQKMFEQVTPEQR----RELILTVRS 479
Query: 290 HLAALRVMKYG 300
H+ LR +G
Sbjct: 480 HIPILRQFAHG 490
>gi|378730303|gb|EHY56762.1| hypothetical protein HMPREF1120_04829 [Exophiala dermatitidis
NIH/UT8656]
Length = 907
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 17/309 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ S+++Q KL + +S +++F + +LM+ +G +V K E N++Q +
Sbjct: 555 QHASRFIQLKLETANSDEKEQIFKEIQPNVLQLMTDVFGNYVIQKLFEHGNQAQKKALAN 614
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ L S+ +G V+K + Q L+ + +++ K + G+
Sbjct: 615 QMKGH---VLQLSMQMYGCRVVQKAFDHVLTDQQASLVKELDGPNQQILKVVKDNN-GNH 670
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E FI A L ++ H+ GC + +++ + ++ IL + +
Sbjct: 671 VVQKAIERIPGEHIQFIVDAHRGQMLKMSTHQYGCRVVQRMLEHCRPEAKRAILDELLEH 730
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
L GNYVVQH++ +P + + H + S K S +V+K +++ +A
Sbjct: 731 TLPLISDSFGNYVVQHIIQNGEPHDRRRVVDVVLQHVLAFSKHKFASNIVEKSIEHADAD 790
Query: 239 HY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
I+ L D+ + + D+YGNYV+Q + + ++ LS L ++++
Sbjct: 791 QRSQILHTLTAPDEQGNTPVFGLMKDQYGNYVLQK-VHDQLQGAELSA---LREDMKRNF 846
Query: 292 AALRVMKYG 300
ALR YG
Sbjct: 847 PALRRTSYG 855
>gi|440302927|gb|ELP95233.1| pumilio domain containing protein C4G8.03C, putative [Entamoeba
invadens IP1]
Length = 549
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 22/286 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q+ + G + ++ + EL + + +V K +E ES+ A+
Sbjct: 244 GSRSVQQNIEKGTADERLTIWRAIQSHIVELSADLFANYVIQKALEFVPESRHAV---PA 300
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFL-------MMTKP 115
++ + L ++ +G V+K ++ Y M K LF+ L + +
Sbjct: 301 QMKNNVLRL-TLHMYGCRVVQKAVE---------YAAMKDRKLLFEELRGHLVQCIEDQN 350
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KC+E + +A L H GC + I+++ +L +I
Sbjct: 351 GNHVIQKCVEKGDRSMVMDVVKALNGIVLECCRHPYGCRVVQRVIESVDYDCVVDLLKII 410
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ +L+ + GNYVVQ+VL I L+G+ V LS+ K S V++K K+
Sbjct: 411 EPQSLNLTEDQYGNYVVQNVLERGYDNDRHIILTKLKGNIVRLSMGKYSSNVIEKCFKHA 470
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
QN I+EE+ +D I+++ D++ NYV+Q + DR +
Sbjct: 471 TQNERAQILEEIYVNDGIVKMMQDQFANYVVQKIIEAVNDVDREKI 516
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
+ L L H GC + ++ RK + + + ++GN+V+Q + D
Sbjct: 305 NVLRLTLHMYGCRVVQKAVEYAAMKDRKLLFEELRGHLVQCIEDQNGNHVIQKCVEKGDR 364
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY-IVEELLN--SDQILQVASDK 258
++ + AL G ++ G VVQ+ ++ +V Y V +LL Q L + D+
Sbjct: 365 SMVMDVVKALNGIVLECCRHPYGCRVVQRVIE---SVDYDCVVDLLKIIEPQSLNLTEDQ 421
Query: 259 YGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
YGNYV+Q L DR ++TKL+ ++ L + KY SN
Sbjct: 422 YGNYVVQNVLERGYDNDR----HIILTKLKGNIVRLSMGKYSSN 461
>gi|350585829|ref|XP_003482059.1| PREDICTED: pumilio homolog 1 isoform 1 [Sus scrofa]
Length = 640
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ GS+++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 314 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL-- 371
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMT 113
+ + LA + +G ++K ++ + L HV+ +K
Sbjct: 372 -AERIRGHVLSLA-LQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------D 421
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILH 173
+ G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 422 QNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILE 481
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K +
Sbjct: 482 ELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVT 541
Query: 234 YQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVT 285
+ + +++E+ + + + D+Y NYV+Q + V Q ++ +H
Sbjct: 542 HASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH----- 596
Query: 286 KLQQHLAALRVMKYG 300
K++ H+A LR YG
Sbjct: 597 KIRPHIATLRKYTYG 611
>gi|218202388|gb|EEC84815.1| hypothetical protein OsI_31896 [Oryza sativa Indica Group]
Length = 988
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 141/308 (45%), Gaps = 20/308 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + D LF V ELM+ +G +V KF E + Q I
Sbjct: 663 QNGSRFIQQKLENCTIEEKDLLFAEVLPHALELMTDVFGNYVIQKFFEKGSPQQKREIAN 722
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ +F L S+ +G ++K ++V+ ++ ++ L + + G+ VI
Sbjct: 723 KLA--GHVFSL-SLQMYGCRVIQKALEVIDLEQKIV--LVGELDGHVLRCVHDQNGNHVI 777
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV--- 177
KC+E F+ + L+ H GC + ++ + S + L +I
Sbjct: 778 QKCIECIPLEHIGFLVSSFQCQVAKLSMHTYGCRVIQRILE--RCSNNSECLCIIDEILQ 835
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+A L++ + GNYVVQHVL + I L G V +S K S V+++ ++ +
Sbjct: 836 SACILAQDQYGNYVVQHVLEKGNEHERGQIITKLAGQVVPMSQNKFASNVIERCFEHGGS 895
Query: 238 ------VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
V I+++ ++ +L + D+Y NYV+Q L Q + + L+++++ HL
Sbjct: 896 AERELLVKEILKQTEGNNYLLVIMKDQYANYVVQKMLTTCNEQHK----EILLSRVKIHL 951
Query: 292 AALRVMKY 299
L+ Y
Sbjct: 952 PLLKKYTY 959
>gi|118378471|ref|XP_001022411.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila]
gi|89304178|gb|EAS02166.1| Pumilio-family RNA binding repeat containing protein [Tetrahymena
thermophila SB210]
Length = 977
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 132/308 (42%), Gaps = 28/308 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALII 59
+ S+ +Q++ + +K+F + LM Q+G +V K E E + L
Sbjct: 557 QNSSRTIQKQFENSTIEEKNKIFERIQPEALNLMKDQFGNYVIQKLFEKGTIEHKEKLYY 616
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
+ +QL S+ +G ++K ++ + + P + ++ L + + G+ V
Sbjct: 617 IIKGNVEQL----SLHTYGCRVIQKALEELKERPQMQEGLIQELNNKIMTCIQDQNGNHV 672
Query: 120 ILKCLEPSYNHK-----NDFIYQAALE---------HCLY-----LACHEQGCINLNNFI 160
I KC E + K N+ I LE + Y LA H GC + +
Sbjct: 673 IQKCFETLSSSKLTTIINEVIQNVNLELQNKYLFNKNKFYQKIEELAFHPYGCRVIQRIL 732
Query: 161 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSL 220
+ K+I + N L + GNY++Q+++ D I ++ H+VDLSL
Sbjct: 733 EFCSNPETKKIYEKLMTNLIRLCECQYGNYIIQYIIEKGQKLEKDEILQVVKVHFVDLSL 792
Query: 221 TKCGSFVVQKFLKYQNAVHY--IVEELL--NSDQILQVASDKYGNYVIQTALVETMRQDR 276
K S V +K + Y + +++ LL N+ L++ + +GNYV+Q + + +
Sbjct: 793 NKFASNVTEKSIVYSDEEFKAGVLDVLLRPNNQNHLELTKNAFGNYVVQRLYEKAQHETK 852
Query: 277 LSVHQRLV 284
L V Q L+
Sbjct: 853 LRVCQYLL 860
>gi|451845819|gb|EMD59130.1| hypothetical protein COCSADRAFT_175690 [Cochliobolus sativus
ND90Pr]
Length = 893
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S + + +F + +LM +G +V KF E +++Q +++
Sbjct: 521 QHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQTQKKILVG 580
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
K+ + + LA+ + V+K ++ L S +K L K ++ T + G+
Sbjct: 581 KM--KGHVLELAN-QMYACRVVQKALEHA-----LTEQQASMVKELEKDVLKTVKDQNGN 632
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K ++ H I +A + L+ + GC + ++ ++ +R+ IL +
Sbjct: 633 HVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQRRFILTELHA 692
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L + GNYV QHV+ P I ++ ++ S K S VV++ L N
Sbjct: 693 EGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNVVERCLICSND 752
Query: 238 VHY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQD 275
+V +L+ ++ ++ + D YGNYVIQ L++T+ +D
Sbjct: 753 AQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQK-LLDTLTRD 796
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 513 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 572
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ ++GH ++L+ VVQK L++ Q A +V+EL +L+ D
Sbjct: 573 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQA--SMVKEL--EKDVLKTVKD 628
Query: 258 KYGNYVIQTALVETMRQDRLSVH--QRLVTKLQQHLAALRVMKYG 300
+ GN+VIQ + DR+ +H Q++V + ++ L V YG
Sbjct: 629 QNGNHVIQKVI------DRVPMHHIQKIVEAFRGNVGVLSVNSYG 667
>gi|307102758|gb|EFN51026.1| hypothetical protein CHLNCDRAFT_28462 [Chlorella variabilis]
Length = 393
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 138/316 (43%), Gaps = 28/316 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q++L + L LF V LM +G +V +F+E A +
Sbjct: 24 QHGSRLVQQQLETAAPEELTALFGEVRHKLLPLMVDVFGNYVVQRFLERGGAEVQAAVAE 83
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
I + L S+ +G V+K ++V+ Q +S + L + + + G+
Sbjct: 84 AIRGK---ALPLSLQMYGCRVVQKALEVLPQQ-----QRVSICRELTEHTLRCVRDQNGN 135
Query: 118 SVILKCLE---PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMK-GSRRKQILH 173
V+ KC+E PS ++ + + + L+ H GC + ++ R++++
Sbjct: 136 HVVQKCIECVQPSGPARD--MIEIIVNKGQALSTHTFGCRLVQRVLEFCSIAELREKVIS 193
Query: 174 LISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
+ + LS + GNYVVQH++ ++I + + L+ K S VV+ LK
Sbjct: 194 DVLDSTLQLSHDQYGNYVVQHLVAKGPGPARESIVAKVAPQVMTLAQHKYASNVVEACLK 253
Query: 234 YQNAVH--YIVEELLNSDQILQVA-----SDKYGNYVIQTALVETMRQDRLSVHQRLVTK 286
+ H IV++++ A D+YGNYV+Q AL R + L+
Sbjct: 254 HSGQAHRDAIVDQMIRESGARPAALTALMRDQYGNYVVQRALEVATPPQRAA----LLAA 309
Query: 287 LQQHLAALRVMKYGSN 302
++ HL AL+ YG +
Sbjct: 310 IKPHLDALKKYTYGKH 325
Score = 40.4 bits (93), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 18/235 (7%)
Query: 75 DKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDF 134
D+ GS V++ ++ A P L + ++ LM+ G+ V+ + LE
Sbjct: 23 DQHGSRLVQQQLETAA--PEELTALFGEVRHKLLPLMVDVFGNYVVQRFLERGGAEVQAA 80
Query: 135 IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 194
+ +A L L+ GC + ++ + +R I ++ + R ++GN+VVQ
Sbjct: 81 VAEAIRGKALPLSLQMYGCRVVQKALEVLPQQQRVSICRELTEHTLRCVRDQNGNHVVQK 140
Query: 195 VLNLEDPF-----LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNS- 248
+ P +I+ I +G LS G +VQ+ L++ ++ + E++++
Sbjct: 141 CIECVQPSGPARDMIEIIVN--KGQA--LSTHTFGCRLVQRVLEF-CSIAELREKVISDV 195
Query: 249 -DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
D LQ++ D+YGNYV+Q + + R S+ V K+ + L KY SN
Sbjct: 196 LDSTLQLSHDQYGNYVVQHLVAKGPGPARESI----VAKVAPQVMTLAQHKYASN 246
>gi|241950345|ref|XP_002417895.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative;
RNA-binding protein, putative [Candida dubliniensis
CD36]
gi|223641233|emb|CAX45613.1| Protein binding to mRNAs encoding chromatin modifiers and spindle
pole body components; involved in longevity, in
maintenance of cell wall integrity, and in sensitivity
to and recovery from pheromone arrest, putative [Candida
dubliniensis CD36]
Length = 982
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 138/286 (48%), Gaps = 32/286 (11%)
Query: 22 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 81
+F + + +EL+ +G ++ K I CNES L L++ Q LF + S+++ G+ +
Sbjct: 324 IFNQIYSYVYELIVDPFGNYLIQKLIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRA 380
Query: 82 VKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALE 141
++K+I + S L ++ LK L+ G+ VI K L FIY + ++
Sbjct: 381 LQKIIDSLNNSHQLGL-LIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIID 439
Query: 142 HCLYLACHEQGCINLNNFIDNMK----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
+A H+ GC L ++++ G + IL N L + GNYV+Q++++
Sbjct: 440 DLYIVATHKHGCCVLQKCLNHVTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLIS 497
Query: 198 LEDPFLIDAICFALRGHYVDLSLT-----KCGSFVVQKFLK-----------YQNAVHYI 241
+ +D I F + ++V+ ++ K S VV+KFLK + N +
Sbjct: 498 INS---LD-INFQIFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFEL 553
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ +L SD + + +D YGNYVIQT +++ M +++ + KL
Sbjct: 554 IYIILVSD-LNVLINDPYGNYVIQT-MIDIMVNPQVNYQNNNIDKL 597
>gi|367028016|ref|XP_003663292.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
gi|347010561|gb|AEO58047.1| hypothetical protein MYCTH_2305032 [Myceliophthora thermophila ATCC
42464]
Length = 891
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 138/302 (45%), Gaps = 18/302 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++ S+++Q+KL + +S D++F + +LM +G +V K E + Q+ +L
Sbjct: 505 QQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGD--QVQKKVL 562
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ L S+ + V+K ++ +V Q L+ + S L ++ K + G+
Sbjct: 563 ASAMKGKVVDL-SMQPYACRVVQKALEHVLVEQQTELVKELESDLLKVAK----DQHGNH 617
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI + + DFI LA H+ GC + +++ + + ++ + +
Sbjct: 618 VIQQAIVLVPREHIDFIMTGFKGRVYELASHQFGCRVIQRILEHGTEADKAALMVELHNS 677
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQN 236
A SL GNYV+QHVL P + + + LS K S VV+K L
Sbjct: 678 AQSLVTDMYGNYVIQHVLEKGRPEDRAKMIGVVTPQLLMLSRHKNASNVVEKCIMLGTPE 737
Query: 237 AVHYIVEELLNSD---QILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
I ++L+ + + Q+ D++GNYVIQ + QDR+ LV KL HL +
Sbjct: 738 EQRAIRDKLMGEEPNSPLFQLMKDQFGNYVIQKLVKALQGQDRMV----LVNKLASHLQS 793
Query: 294 LR 295
LR
Sbjct: 794 LR 795
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 12/139 (8%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + +Q + ++ R Q+ I NA L + GNYV+Q + D
Sbjct: 497 HIVEFSGDQQASRFIQQKLETANSDERDQVFAEIEKNAIQLMKDVFGNYVMQKLFEYGDQ 556
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEEL------LNSDQILQVA 255
+ A++G VDLS+ VVQK L+ H +VE+ L SD +L+VA
Sbjct: 557 VQKKVLASAMKGKVVDLSMQPYACRVVQKALE-----HVLVEQQTELVKELESD-LLKVA 610
Query: 256 SDKYGNYVIQTALVETMRQ 274
D++GN+VIQ A+V R+
Sbjct: 611 KDQHGNHVIQQAIVLVPRE 629
>gi|9759249|dbj|BAB09773.1| unnamed protein product [Arabidopsis thaliana]
Length = 250
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 33/203 (16%)
Query: 69 FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSY 128
F++ + +K GS +++KL+ S + A+ RLF +M K S V ++ +
Sbjct: 33 FMVITTNKNGSKTLQKLM---GMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQ 89
Query: 129 NHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSG 188
K + +Y L + +LA + + LS G
Sbjct: 90 QDKRELMYDQILRYACFLAGDQYALL---------------------------LSNDAYG 122
Query: 189 NYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA-VHYIVEELL- 246
N+VVQHVL L D I L G+ V+LS K GS++V++ L+ + + +V +LL
Sbjct: 123 NFVVQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVPMATVVLDLLA 182
Query: 247 -NSDQILQVASDKYGNYVIQTAL 268
++ ++++A +YGN+V+ AL
Sbjct: 183 CKTEMLIRLARSEYGNFVVCKAL 205
>gi|62718869|emb|CAG25892.1| Pumilio homolog [Dugesia japonica]
Length = 925
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 147/352 (41%), Gaps = 58/352 (16%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + + LM+ +G +V +F + Q+ ++
Sbjct: 561 QHGSRFIQQKLQESSHNEKTMVFREILPQCYSLMTDVFGNYVIQRFFDLGTPEQIQILGD 620
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I Q L S+ +G ++K ++ V++ +++ L+ + + G+ V+
Sbjct: 621 RIRNQ---VLQLSLQMYGCRVIQKALETVSKV--TQINIVRELEGSVIKCVKDQNGNHVV 675
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E DFI A ++ L+ H GC + +++ + IL +
Sbjct: 676 QKCVECVPPEHLDFIIDAFKDNVYSLSTHSYGCRVIQRILEHCTPEQTAPILAELHHFTE 735
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
L + + GNYV+QHVL I LRG V+LS+ K S VV+K + + +
Sbjct: 736 ELVKDQYGNYVIQHVLEHGKTEDKSKIVNLLRGRIVELSIHKFASNVVEKAVAHATRQER 795
Query: 239 HYIVEELLN-------SDQILQVAS--------------------------------DKY 259
++ E+L S+ I++ A D++
Sbjct: 796 QALINEVLQDSIPVSASNAIMRTADVSGVVYGSETDGSDTDGGGSVQRESVLYWMMKDQF 855
Query: 260 GNYVIQTAL---VETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSNKEIQKK 308
NYVIQ L + MR++ L+ K+ HL +LR K S K I K
Sbjct: 856 ANYVIQKMLDVAEQPMRKE-------LMPKINPHLGSLR--KSPSGKHIINK 898
>gi|50311501|ref|XP_455775.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644911|emb|CAG98483.1| KLLA0F15477p [Kluyveromyces lactis]
Length = 930
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 68/304 (22%), Positives = 139/304 (45%), Gaps = 34/304 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q++L++ + +F + L +G +V KF E ++Q +++
Sbjct: 600 QHGSRFIQQELATASDADKEVIFNEIRDQCIPLSHDVFGNYVIQKFFEHGTKTQREVLVD 659
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F+ ++ L S++ + ++K + + + + ++S L ++ + G+ VI
Sbjct: 660 Q--FRGKMENL-SLEMYACRVIQKAFEFLNEDQKV--DLVSELSHCVLAMIKDQNGNHVI 714
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E K FI Q+ +L+ H GC + ++ + IL+ +
Sbjct: 715 QKAIECIPIEKLPFILQSLRGQIYHLSTHSYGCRVVQRLLEFGTLKDQDDILNDLDEFIP 774
Query: 181 SLSRHRSGNYVVQHVLN-----------LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
L + + GNYV+QH+L + +ID I R + V+ S K S VV+
Sbjct: 775 FLIQDQYGNYVIQHILQHGTEDTSSHIGMSKQNIIDII----RKNVVEYSKHKFASNVVE 830
Query: 230 KFLKY--QNAVHYIVEELLNSDQ-----------ILQVASDKYGNYVIQTAL-VETMRQD 275
K + Y +N + I++++L D+ ++ + D+Y NYV+Q + V T +
Sbjct: 831 KSVVYGSKNQIRQILDQILPRDEEHAADLEDNAPLILMMRDQYANYVVQKLVGVATGEDE 890
Query: 276 RLSV 279
RL V
Sbjct: 891 RLIV 894
Score = 39.7 bits (91), Expect = 1.6, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 26/147 (17%)
Query: 181 SLSRHRSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
++ + ++GN+V+Q + + PF++ +LRG LS G VVQ+ L++
Sbjct: 703 AMIKDQNGNHVIQKAIECIPIEKLPFILQ----SLRGQIYHLSTHSYGCRVVQRLLEFGT 758
Query: 237 AVHYIVEELLNS-DQILQ-VASDKYGNYVIQTAL----------VETMRQDRLSVHQRLV 284
+++LN D+ + + D+YGNYVIQ L + +Q+ + + ++ V
Sbjct: 759 LKDQ--DDILNDLDEFIPFLIQDQYGNYVIQHILQHGTEDTSSHIGMSKQNIIDIIRKNV 816
Query: 285 TKLQQHLAALRVMK----YGSNKEIQK 307
+ +H A V++ YGS +I++
Sbjct: 817 VEYSKHKFASNVVEKSVVYGSKNQIRQ 843
>gi|145547968|ref|XP_001459665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427491|emb|CAK92268.1| unnamed protein product [Paramecium tetraurelia]
Length = 640
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 139/298 (46%), Gaps = 11/298 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q+ ++ LD+L + +LM Y ++FG +SC Q L IL
Sbjct: 334 QHGSRLIQKHFTTCTQIELDQLLQEIGSNIGDLMIDPYANYMFGSLSQSCAPHQ-RLYIL 392
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ T ++L +A DK G+ +++ L+ +++ S V +++K L + G+ +I
Sbjct: 393 Q-TISNRLVDIA-CDKKGTHAIQSLVSLIS-SKQEEEMVENSIKNHIINLTLDSQGTHLI 449
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K + + + I+ +E + + H+ G L + I K + K LI +
Sbjct: 450 KKIIARFSEDRLNLIFSKLMEKFIQVVNHQFGLCVLKDLITKFKNNPEKCTFILIKMRDQ 509
Query: 181 --SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
+ + GNY VQH +++ I + V LS+ K S VV+K + +A
Sbjct: 510 LDDIVQDPFGNYGVQHAIDVYGDLKCTPIIDKILQKLVQLSIHKYSSNVVEKCILETSAK 569
Query: 239 --HYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+++L L++ +K+G +V+Q AL E ++L ++L LQ++L ++
Sbjct: 570 TQKRFIKQLSQDVICLELMKNKFGTFVLQKALQEA---EKLGEGEQLQQALQRNLPSI 624
>gi|167388005|ref|XP_001738397.1| pumilio domain-containing protein C6G9.14 [Entamoeba dispar SAW760]
gi|165898416|gb|EDR25278.1| pumilio domain-containing protein C6G9.14, putative [Entamoeba
dispar SAW760]
Length = 389
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 147 LSLHMYGCRVVQKAIEFVDDIDKRTIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 206
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYV 263
+I FA +G + S G V+Q+ L+ + ++EE+L + L ++ D+YGNYV
Sbjct: 207 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPTEKSYPLLEEILPN--TLDLSKDQYGNYV 264
Query: 264 IQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
IQ +VE +R ++ LQ ++A L + KY SN
Sbjct: 265 IQ-YIVEKCPSER----NKIRKALQGNIALLSMQKYSSN 298
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 13/282 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q K+ + + D +F + L + +V K E Q + +I
Sbjct: 80 QTGSRTVQHKIETSITE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFGVVWQKSQLIK 138
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T F+ S+ +G V+K I+ V + + ++ + + G+ VI
Sbjct: 139 RLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRT--IFNEIEDNIIACIQDQNGNHVI 193
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E D I A L + H GC + ++ + + +L I N
Sbjct: 194 QKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPTEKSYPLLEEILPNTL 253
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K N
Sbjct: 254 DLSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEKCFMCANLKGR 312
Query: 239 HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDR 276
I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 313 QEILKEIYGIKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 354
>gi|308198245|ref|XP_001387179.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
gi|149389106|gb|EAZ63156.2| protein necessary for high temperature growth [Scheffersomyces
stipitis CBS 6054]
Length = 528
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 146/292 (50%), Gaps = 32/292 (10%)
Query: 3 GSQYLQEKLSSG-----DSRI--LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL 55
G ++LQ+K+ +R+ + +F + + +EL+ +G ++ K I CNES L
Sbjct: 145 GCRFLQKKIDENLIPNYQTRLNNFEVIFAQIHPYLYELIIDPFGNYLIQKLIVYCNESNL 204
Query: 56 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
L IL+I Q LF + S+++ G+ +++K+I + L ++ +K L+
Sbjct: 205 NL-ILQI-LQYNLFQI-SINQHGTRALQKIIDNLNNQYQLNL-LIKGMKPYIIELIKDLN 260
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K L FIY + +E +A H+ GC L ++++ ++ ++ I
Sbjct: 261 GNHVIQKILNKYPPSDCQFIYDSIIEGLYVVASHKHGCCVLQKCLNHVTMTQLQEFSACI 320
Query: 176 --SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA--LRGHYVDLSLTKCGSFVVQKF 231
N L + GNYV+Q+++++ + F I+ F L+ +L K S VV+KF
Sbjct: 321 LDFANFQLLINDQFGNYVLQYLISI-NSFEINYKIFQNFLQFGINNLCNLKFSSNVVEKF 379
Query: 232 LK--YQN-------AVHY------IVEELLNSDQILQVASDKYGNYVIQTAL 268
LK Y N AV++ ++ +L +D + ++ +D YGNYVIQT +
Sbjct: 380 LKNCYNNEAYNGVTAVNFSNLKMELIYNILIND-LNKLINDPYGNYVIQTLI 430
>gi|240280462|gb|EER43966.1| mRNA binding protein Pumilio 2 [Ajellomyces capsulatus H143]
Length = 900
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 22/280 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q L S +S D++F + +LM+ +G +V K E N+SQ ++
Sbjct: 552 QHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDVFGNYVVQKLFEHGNQSQKKILAN 611
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
++ L S +G V+K ++ + L S +K L ++ + G+
Sbjct: 612 QMKGH---ILALSTQMYGCRVVQKALEHI-----LTDQQASMVKELENHVLKCVKDQNGN 663
Query: 118 SVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
VI K +E PS + + FI A LA H GC + +++ R+ +L +
Sbjct: 664 HVIQKAVERVPSVHIQ--FIINAFKGQVHRLAAHPYGCRVIQRMLEHCTEPDRRAVLEEL 721
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+SL + GNYV+QHV+ + I + + S K S VV+K +++
Sbjct: 722 HACTSSLIPDQFGNYVIQHVIGNGEEHDKARIISIVISQLLVFSKHKFASNVVEKSIEFG 781
Query: 235 -QNAVHYIVEELLNSDQ-----ILQVASDKYGNYVIQTAL 268
+ I+ +L + +L + D+YGNYVIQ L
Sbjct: 782 ADDQRAEILRQLTTPNDRGESPLLGLMRDQYGNYVIQKVL 821
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 129 NHKNDFIYQ--AALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
N+KN+ Y+ H + + + G + + +++ + Q+ I N L
Sbjct: 529 NNKNNKRYELKDIYNHIVEFSGDQHGSRFIQHMLESANSDEKDQVFREIQPNCLQLMTDV 588
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNYVVQ + + + ++GH + LS G VVQK L++ + +V+E
Sbjct: 589 FGNYVVQKLFEHGNQSQKKILANQMKGHILALSTQMYGCRVVQKALEHILTDQQASMVKE 648
Query: 245 LLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVH-QRLVTKLQQHLAALRVMKYG 300
L N +L+ D+ GN+VIQ A+ SVH Q ++ + + L YG
Sbjct: 649 LEN--HVLKCVKDQNGNHVIQKAVERVP-----SVHIQFIINAFKGQVHRLAAHPYG 698
>gi|150951083|ref|XP_001387330.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
gi|149388306|gb|EAZ63307.2| Translational repressor Pumilio/PUF3 and related RNA-binding
proteins (Puf superfamily) [Scheffersomyces stipitis CBS
6054]
Length = 835
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 148/309 (47%), Gaps = 29/309 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + +++LM+ +G +V K+ E + +Q +++
Sbjct: 505 QHGSRFIQQKLPDASDEEKEVIFNEIRDISYDLMTDVFGNYVIQKYFEHGSTTQKKVLLD 564
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMM---TKPGS 117
+ ++ L S+ +G V++ ++ + L + ++ L ++++ + G+
Sbjct: 565 YMI--GHIYEL-SLQMYGCRVVQRALEAID-----LDGQIKIIEELRDYILICAKDQNGN 616
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + FI + +L+ H GC + ++ ++ IL ++
Sbjct: 617 HVIQKSIERIPFDRIRFILDSLDNQIYHLSTHPYGCRVIQRLLEYSNVEDQQVILQELNR 676
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L + + GNYV+QH+L +P +AI + G V+ S K S V++K +KY
Sbjct: 677 FIFYLIQDQYGNYVMQHILERGEPDDREAILKVVLGSVVNFSKHKFASNVIEKCIKYGTL 736
Query: 238 VH--YIVEELL--NSDQILQVAS----------DKYGNYVIQTALVETMRQDRLSVHQR- 282
I+ E++ N D +++ S D+Y NYVIQ LVE D S +R
Sbjct: 737 SQRKRILREVMLGNEDFNVELVSDESPLALMMKDQYANYVIQK-LVEGF--DANSEEKRI 793
Query: 283 LVTKLQQHL 291
LV KL+Q+L
Sbjct: 794 LVVKLRQYL 802
>gi|414869527|tpg|DAA48084.1| TPA: hypothetical protein ZEAMMB73_002196 [Zea mays]
Length = 236
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 14/197 (7%)
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ-IL 172
+ G+ VI KC+E F+ A L+ H GC + +++ G+ + Q I+
Sbjct: 24 QNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHPYGCRVIQRILEHCGGNSQGQCII 83
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
I L++ + GNYV QHVL I L G V +S K S V++K
Sbjct: 84 DEILQWVCILAQDQYGNYVTQHVLERGKAHERSQIITKLAGQVVTMSQNKYASNVIEKCF 143
Query: 233 KYQNA------VHYIVEELLNSDQI---LQVASDKYGNYVIQTALVETMRQDRLSVHQRL 283
++ + + IVE+ ++ + L + D+Y NYV+Q L ET +D+ + L
Sbjct: 144 QHGDIAERDLLIRRIVEQTEGNNNLLVCLAMMKDQYANYVVQKIL-ETCNEDQREL---L 199
Query: 284 VTKLQQHLAALRVMKYG 300
+++++ H+ ALR YG
Sbjct: 200 LSRVKDHMQALRKYTYG 216
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 13/145 (8%)
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
M+ ++ ++H + + R ++GN+V+Q + I + A +G LS+
Sbjct: 1 MELDQKIDLVHELDGHIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFQGQVTSLSMHP 60
Query: 223 CGSFVVQKFLKY---QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
G V+Q+ L++ + I++E+L IL A D+YGNYV Q L +R
Sbjct: 61 YGCRVIQRILEHCGGNSQGQCIIDEILQWVCIL--AQDQYGNYVTQHVL------ERGKA 112
Query: 280 HQR--LVTKLQQHLAALRVMKYGSN 302
H+R ++TKL + + KY SN
Sbjct: 113 HERSQIITKLAGQVVTMSQNKYASN 137
>gi|407039070|gb|EKE39443.1| pumilio family RNA-binding protein [Entamoeba nuttalli P19]
Length = 394
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 152 LSLHMYGCRVVQKAIEFVDDIDKRIIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 211
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYV 263
+I FA +G + S G V+Q+ L+ + ++EE+L + L+++ D+YGNYV
Sbjct: 212 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPN--TLELSKDQYGNYV 269
Query: 264 IQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
IQ +VE +R ++ LQ ++A L + KY SN
Sbjct: 270 IQ-YIVEKCPSER----NKIRKALQGNIALLSMQKYSSN 303
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 13/280 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q K+ + + D +F + L + +V K E Q + +I ++
Sbjct: 87 GSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFGVFWQKSQLIKRL 145
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T F+ S+ +G V+K I+ V + + + ++ + + G+ VI K
Sbjct: 146 TGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIACIQDQNGNHVIQK 200
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E D I A L + H GC + ++ + + +L I N L
Sbjct: 201 CVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPNTLEL 260
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
S+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K N
Sbjct: 261 SKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEKCFMCANLKGRQE 319
Query: 241 IVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDR 276
I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 320 ILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 359
>gi|449710328|gb|EMD49428.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 422
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 180 LSLHMYGCRVVQKAIEFVDDIDKRIIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 239
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYV 263
+I FA +G + S G V+Q+ L+ + ++EE+L + L+++ D+YGNYV
Sbjct: 240 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPN--TLELSKDQYGNYV 297
Query: 264 IQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
IQ +VE +R ++ LQ ++A L + KY SN
Sbjct: 298 IQ-YIVEKCPSER----NKIRKALQGNIALLSMQKYSSN 331
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 123/280 (43%), Gaps = 13/280 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+ +Q K+ + + D +F + L + +V K E Q + +I ++
Sbjct: 115 GSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFGVFWQKSQLIKRL 173
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
T F+ S+ +G V+K I+ V + + + ++ + + G+ VI K
Sbjct: 174 TGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIACIQDQNGNHVIQK 228
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
C+E D I A L + H GC + ++ + + +L I N L
Sbjct: 229 CVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPNTLEL 288
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AVHY 240
S+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K N
Sbjct: 289 SKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEKCFMCANLKGRQE 347
Query: 241 IVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDR 276
I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 348 ILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 387
>gi|183234600|ref|XP_651888.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801007|gb|EAL46500.2| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
Length = 394
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 146 LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLID 205
L+ H GC + I+ + ++ I + I N + + ++GN+V+Q + D +ID
Sbjct: 152 LSLHMYGCRVVQKAIEFVDDIDKRIIFNEIEDNIIACIQDQNGNHVIQKCVEKGDLKIID 211
Query: 206 AICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKYGNYV 263
+I FA +G + S G V+Q+ L+ + ++EE+L + L+++ D+YGNYV
Sbjct: 212 SIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPN--TLELSKDQYGNYV 269
Query: 264 IQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
IQ +VE +R ++ LQ ++A L + KY SN
Sbjct: 270 IQ-YIVEKCPSER----NKIRKALQGNIALLSMQKYSSN 303
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 13/282 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q K+ + + D +F + L + +V K E Q + +I
Sbjct: 85 QTGSRTVQHKIETSTTE-RDIIFDSIEKEAVTLSKDVFANYVIQKLFEFGVFWQKSQLIK 143
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T F+ S+ +G V+K I+ V + + + ++ + + G+ VI
Sbjct: 144 RLTGS---FVELSLHMYGCRVVQKAIEFVDDIDKRI--IFNEIEDNIIACIQDQNGNHVI 198
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E D I A L + H GC + ++ + + +L I N
Sbjct: 199 QKCVEKGDLKIIDSIIFAFKGRVLAFSQHPYGCRVIQRILEKIPPEKSYPLLEEILPNTL 258
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN--AV 238
LS+ + GNYV+Q+++ + P + I AL+G+ LS+ K S V++K N
Sbjct: 259 ELSKDQYGNYVIQYIVE-KCPSERNKIRKALQGNIALLSMQKYSSNVIEKCFMCANLKGR 317
Query: 239 HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDR 276
I++E+ + +L + D+Y NYV+Q + +DR
Sbjct: 318 QEILKEIYGVKKDGAPLLMMMRDQYANYVVQKIIENVSDEDR 359
>gi|168012831|ref|XP_001759105.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689804|gb|EDQ76174.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 10/200 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F V LM+ +G +V KF E + Q +
Sbjct: 8 QHGSRFIQQKLETASPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQRRELAS 67
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKV--VAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + L S+ +G ++K ++V V Q L+ + + R + + G+
Sbjct: 68 QLV---EHVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVR----DQNGNH 120
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGS-RRKQILHLISV 177
VI KC+E K FI A + L+ H GC + +++ ++K I+ I
Sbjct: 121 VIQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILR 180
Query: 178 NAASLSRHRSGNYVVQHVLN 197
+ +L++ + GNYVVQHVL
Sbjct: 181 STCTLAQDQYGNYVVQHVLE 200
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 7/221 (3%)
Query: 72 ASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHK 131
S D+ GS +++ K+ SP V + LM G+ VI K E +
Sbjct: 4 CSADQHGSRFIQQ--KLETASPEDKNMVFQEVLPRALTLMTDVFGNYVIQKFFEHGTQQQ 61
Query: 132 NDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYV 191
+ +EH L L+ GC + ++ + ++ Q++ + + R ++GN+V
Sbjct: 62 RRELASQLVEHVLTLSLQMYGCRVIQKALEVVDVDQQTQLVSELDGHVMRCVRDQNGNHV 121
Query: 192 VQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---QNAVHYIVEELLNS 248
+Q + P I I A V LS G V+Q+ L++ + I+EE+L S
Sbjct: 122 IQKCIECVPPAKIHFIISAFYNQVVTLSTHPYGCRVIQRVLEHCTDEQKQKGIMEEILRS 181
Query: 249 DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
L A D+YGNYV+Q L +R + +L ++ Q
Sbjct: 182 TCTL--AQDQYGNYVVQHVLEHGRDHERSEIITKLAGQIVQ 220
>gi|341874392|gb|EGT30327.1| CBN-PUF-9 protein [Caenorhabditis brenneri]
Length = 688
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 145/329 (44%), Gaps = 41/329 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL SR +F V ELM+ +G +V KF E N Q ++
Sbjct: 343 QHGSRFIQQKLERASSRDKAAIFTPVLEHAEELMTDVFGNYVIQKFFEYGNNDQRNQLVA 402
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + LA + +G ++K ++ V + + ++ ++ + + G+ VI
Sbjct: 403 --TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVI 457
Query: 121 LKCLEPSYNHKNDFIYQAAL----EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K +E + FI A ++ L+ H GC + ++ +++ +L ++
Sbjct: 458 QKVIERVEPDRLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNDEQKQPVLDALN 517
Query: 177 VNAASLSRHRSGNYVVQHVLN----------LEDPFLIDAICFALRGHYVDLSLTKCGSF 226
++ L + GNYV+QHV+ ++D D + FA K S
Sbjct: 518 LHLKQLVLDQYGNYVIQHVIEHGSAKDKEQIVKDVINDDLLKFAQH---------KFASN 568
Query: 227 VVQKFLKY--QNAVHYIVEELLN-----SDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
V++K L + Q + I++++ S +L + D + NYV+Q L Q R
Sbjct: 569 VIEKCLSFGSQEDRNLIIDKVCGDPNDASPPLLLMMKDPFANYVVQKMLDVADPQHR--- 625
Query: 280 HQRLVTKLQQHLAALRVMKYGSNKEIQKK 308
+++ ++ H+A LR KY K I +K
Sbjct: 626 -KKITLTIKPHIATLR--KYNFGKHILRK 651
>gi|344234446|gb|EGV66316.1| hypothetical protein CANTEDRAFT_118702 [Candida tenuis ATCC 10573]
Length = 453
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 38/273 (13%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
+EL+ +G ++ K I+ + L L++ Q LF + S+++ G+ +++K+I+ +
Sbjct: 138 YELIIDPFGNYLIQKLIKYASNENLNLML--DILQSNLFQI-SINQHGTRALQKIIESL- 193
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
SP L + S LK L+ G+ VI K L + FIY + L + +A H+
Sbjct: 194 NSPYQLDLLTSGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHK 253
Query: 151 QGCINLNNFIDNMKGSRRKQILHLI--SVNAASLSRHRSGNYVVQHVLNLED-----PFL 203
GC L ++++ + Q ++ I N L + GNYV+Q+++++ D F
Sbjct: 254 HGCCVLQKCLNHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFY 313
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLK------YQN-------------AVHYIVEE 244
+ + F + HY +L K S V++KF+K ++N VH+I++
Sbjct: 314 SNLVRFDMI-HYCNL---KFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKT 369
Query: 245 LLNSDQILQVASDKYGNYVIQTALVETMRQDRL 277
S + ++ +D +GNYVIQT L++ + +
Sbjct: 370 ---SASLNKLINDPFGNYVIQT-LIDNLTNPNI 398
>gi|384484809|gb|EIE76989.1| hypothetical protein RO3G_01693 [Rhizopus delemar RA 99-880]
Length = 747
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 23/256 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S +F V +LM+ +G +V KF E N+ Q ++
Sbjct: 499 QHGSRFIQQKLETANSDEKQMVFEEVLPNALQLMTDVFGNYVLQKFFEHGNQMQKTILAK 558
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALK-RLFKFL-------MM 112
++ L S+ +G V+K ++ HV++ + +L K L +
Sbjct: 559 QMEGH---VLSLSLQMYGCRVVQKALE----------HVLTEQQAKLVKELDGCVLKCIK 605
Query: 113 TKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 172
+ G+ VI K +E FI A LA H GC + ++ + +L
Sbjct: 606 DQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTGPLL 665
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ + L + + GNYV+QH+L P + +RGH + LS K S VV+K +
Sbjct: 666 DELHRCTSQLVQDQYGNYVIQHILERGRPADKSLVIEKIRGHVLQLSKHKFASNVVEKCV 725
Query: 233 KY--QNAVHYIVEELL 246
+ + ++EE+L
Sbjct: 726 DFGSKRDRQLLIEEVL 741
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYI 241
+ ++GN+V+Q + I I A G +L+ G V+Q+ ++ ++ +
Sbjct: 605 KDQNGNHVIQKAIERVPAQHIQFIIDAFHGQVYNLATHPYGCRVIQRMFEHCTEDQTGPL 664
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
++EL Q+ D+YGNYVIQ L D+ V + K++ H+ L K+ S
Sbjct: 665 LDELHRC--TSQLVQDQYGNYVIQHILERGRPADKSLV----IEKIRGHVLQLSKHKFAS 718
Query: 302 N 302
N
Sbjct: 719 N 719
>gi|221504265|gb|EEE29940.1| pumilio, putative [Toxoplasma gondii VEG]
Length = 1913
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 20/271 (7%)
Query: 6 YLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQ 65
+LQE+L + + + + +L Q+G +V KF E+ ++ + + ++T
Sbjct: 1009 FLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYVLQKFFETGSDKEKEWLAAQLT-- 1066
Query: 66 DQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLE 125
D +F L S++ +G +++ ++ + P ++ LK + + G+ VI KC E
Sbjct: 1067 DHVFRL-SLEVYGCRVIQRAVESLPV--PAQLRLVRELKDHVITCVEDQHGNHVIQKCAE 1123
Query: 126 PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+ FI A ++ H GC + ++ S+ ++ ++ L R
Sbjct: 1124 RLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVAALIDVVMAELCMLIRD 1183
Query: 186 RSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ---NAV 238
+ GNYVVQHVL + +ID +C + + LS K VV++ L A
Sbjct: 1184 QFGNYVVQHVLEFGRDADKMKIIDFMCEDI----IALSTEKYACNVVERALTLNAMGRAR 1239
Query: 239 HYIVEELLNSDQILQ----VASDKYGNYVIQ 265
I+ L + + Q V D+YGNYV+Q
Sbjct: 1240 RRIITAALGPEMMGQPLKMVMLDRYGNYVVQ 1270
>gi|402590419|gb|EJW84349.1| hypothetical protein WUBG_04743 [Wuchereria bancrofti]
Length = 399
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 142/317 (44%), Gaps = 31/317 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F V+ LM+ +G +V KF E Q IL
Sbjct: 63 QHGSRFIQQKLERASLKEKQAVFDEVALHAQSLMTDVFGNYVIQKFFEYGTSEQKN--IL 120
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + LA + +G ++K ++ + P ++ ++ + + G+ V+
Sbjct: 121 TNAVKGNVMSLA-LQMYGCRVIQKALESI--EPEQQMEILKEMEGQVLKCVKDQNGNHVV 177
Query: 121 LKCLEPSYNHKNDFIYQAALE-----HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
K +E + FI A + L+ H GC + +++ +++ +L +
Sbjct: 178 QKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYGCRVIQRVLEHCTDEQKRPVLDQL 237
Query: 176 SVNAASLSRHRSGNYVVQHVL---NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ SL + GNYV+QHV+ +LED D I ++G + + K S V++K L
Sbjct: 238 HKHVKSLIVDQYGNYVIQHVIEHGSLEDR---DRIVNQVKGDVLRFAQHKFASNVIEKCL 294
Query: 233 K-----YQNAVHYIVEELLNSDQI----LQVASDKYGNYVIQTALVETMRQDRLSVHQRL 283
++NA+ I E N + I L + D++ NYV+Q L ++ +++
Sbjct: 295 TCGEPHHKNAL--ITEVCGNPNDIATPLLMMMKDQFANYVVQKMLDVA----DSALRKKM 348
Query: 284 VTKLQQHLAALRVMKYG 300
+ ++ H+ ALR YG
Sbjct: 349 MLAIKPHIPALRKYNYG 365
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM G+ VI K E + + + + A + + LA GC + +++++ ++
Sbjct: 95 LMTDVFGNYVIQKFFEYGTSEQKNILTNAVKGNVMSLALQMYGCRVIQKALESIEPEQQM 154
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYV-DLSLTKCG 224
+IL + + ++GN+VVQ V+ D F+IDA+ A V +LS G
Sbjct: 155 EILKEMEGQVLKCVKDQNGNHVVQKVIERVDASRLQFIIDALVPAGDNMTVCNLSTHPYG 214
Query: 225 SFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQR 282
V+Q+ L++ ++++L + + D+YGNYVIQ + +DR R
Sbjct: 215 CRVIQRVLEHCTDEQKRPVLDQL--HKHVKSLIVDQYGNYVIQHVIEHGSLEDR----DR 268
Query: 283 LVTKLQQHLAALRVMKYGSN 302
+V +++ + K+ SN
Sbjct: 269 IVNQVKGDVLRFAQHKFASN 288
>gi|451995215|gb|EMD87684.1| hypothetical protein COCHEDRAFT_1034063 [Cochliobolus
heterostrophus C5]
Length = 889
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 136/285 (47%), Gaps = 19/285 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S + + +F + +LM +G +V KF E +++Q +++
Sbjct: 517 QHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQTQKKILVG 576
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMT---KPGS 117
K+ + + LA+ + V+K ++ L S +K L K ++ T + G+
Sbjct: 577 KM--KGHVLELAN-QMYACRVVQKALEHA-----LTEQQASMVKELEKDVLKTVKDQNGN 628
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K ++ H I +A + L+ + GC + ++ ++ +R+ IL +
Sbjct: 629 HVIQKVIDRVPMHHIQKIVEAFRGNVGVLSVNSYGCRVIQRLLEKVEEPQRRFILTELHA 688
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
L + GNYV QHV+ P I ++ ++ S K S VV++ L +
Sbjct: 689 EGPKLITDQYGNYVTQHVIEHGLPEDRAKIVALIKAQFLVFSKHKFASNVVERCLICSDD 748
Query: 238 VHY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQD 275
+V +L+ ++ ++ + D YGNYVIQ L++T+ +D
Sbjct: 749 AQRRELVSVVLSKNERGESNVMNLLRDGYGNYVIQK-LLDTLTRD 792
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + A + G + ++ ++ + + NA L + GNYV+Q D
Sbjct: 509 HVVEFAGDQHGSRFIQQKLETANSEVKESVFRELEENALQLMQDVFGNYVIQKFFEHGDQ 568
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----QNAVHYIVEELLNSDQILQVASD 257
+ ++GH ++L+ VVQK L++ Q A +V+EL +L+ D
Sbjct: 569 TQKKILVGKMKGHVLELANQMYACRVVQKALEHALTEQQA--SMVKEL--EKDVLKTVKD 624
Query: 258 KYGNYVIQTALVETMRQDRLSVH--QRLVTKLQQHLAALRVMKYG 300
+ GN+VIQ + DR+ +H Q++V + ++ L V YG
Sbjct: 625 QNGNHVIQKVI------DRVPMHHIQKIVEAFRGNVGVLSVNSYG 663
>gi|346971293|gb|EGY14745.1| pumilio domain-containing protein [Verticillium dahliae VdLs.17]
Length = 825
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 138/309 (44%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 436 QHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKVLAA 495
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + + S+ + V+K ++ +V Q L+ + + ++ K + G+
Sbjct: 496 QMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK----DQNGNH 548
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DF+ + LA H GC + ++ ++ IL + +
Sbjct: 549 VVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNS 608
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L + GNYV QHV+ P + + V LS K S VV+K +++ +
Sbjct: 609 AQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEHGSPE 668
Query: 239 HY--IVEELL----NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
I E+L + LQ + D+YGNYVIQ L + DR + + +++
Sbjct: 669 ERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGADR----EAFIEEMKPQF 724
Query: 292 AALRVMKYG 300
AL+ G
Sbjct: 725 IALKKTSTG 733
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + QI I NA L + GNYV+Q +
Sbjct: 428 HVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQ 487
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE---ELLNSDQ--ILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE EL++ Q I++V
Sbjct: 488 VQKKVLAAQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVDELQPDIVKVVK 542
Query: 257 DKYGNYVIQTALVETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNKE 304
D+ GN+V+Q + RQ D + + V++L H RV ++YG++++
Sbjct: 543 DQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQD 597
>gi|353242398|emb|CCA74046.1| related to PUF3-transcript-specific regulator of mRNA degradation
[Piriformospora indica DSM 11827]
Length = 684
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMS-GQYGRFVFGKFIESCNESQLALI 58
+ GS+++Q+KL + S +F V+ F +++ +G +V K E S L
Sbjct: 335 QHGSRFIQQKLDTASSDERQAVFDEVIPAGNFSVLAFDVFGNYVIQKLFEYG--SPLHRR 392
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+L + + L S+D +G V+K + +P V+S L + G+
Sbjct: 393 LLCSAMEGHVLQL-SLDMYGCRVVQKALDC--GTPQQQAAVVSELNGHVLQCVKDANGNH 449
Query: 119 VILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
VI K +E PS + + + A + LA H GC L I++ +L +
Sbjct: 450 VIQKIMELVPS---QRNVLLDAFSGNVRNLASHPYGCRVLQRSIEHAAPEETASLLEELH 506
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQN 236
N++ L + + GNYVVQ++L P D + +LRG+ + ++ K S V +K L N
Sbjct: 507 QNSSLLMQDQFGNYVVQYILEHGAPAHRDRMIDSLRGNVLSMARHKFASNVCEKALLVSN 566
Query: 237 AVH--YIVEELL-----NSDQILQVASDKYGNYVIQTAL 268
V ++EE+L + + + D+Y NYV+Q A+
Sbjct: 567 DVQRRALIEEMLAPMSNGTSPVSIMMKDQYANYVLQKAI 605
>gi|146070732|ref|XP_001463089.1| putative pumillio protein 5 [Leishmania infantum JPCM5]
gi|134067172|emb|CAM65436.1| putative pumillio protein 5 [Leishmania infantum JPCM5]
Length = 481
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 129 NHKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+HK+D I + C +L+ +QGCI + I+ K ++++ ++ + ++L+++
Sbjct: 278 HHKSDALMPIVEVVTSDCQHLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPLLSTLAKN 337
Query: 186 RSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAV-HYIV 242
+ GNYVVQ +L N+E ++ + + +GH+V+LS K S V++K + Q ++ IV
Sbjct: 338 QFGNYVVQCILKNMEGYVSLNDLVASFQGHWVELSCDKYSSNVMEKIVGMLQGSLRQRIV 397
Query: 243 EELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
EL+ LQ + + +GNYV+Q + + Q + VT L L YG
Sbjct: 398 NELIFDVAHLQCLMQNSFGNYVLQAVIGSAVNQYEYGLIYDAVTPL------LHTSPYGH 451
Query: 302 NKEIQKK 308
E + K
Sbjct: 452 RIEAKLK 458
>gi|123432416|ref|XP_001308417.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
gi|121890096|gb|EAX95487.1| Pumilio-family RNA binding repeat containing protein [Trichomonas
vaginalis G3]
Length = 399
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 123/275 (44%), Gaps = 24/275 (8%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+ LQ+K++ + LD +F + EL+ Q FV K E+ E Q +
Sbjct: 91 SRSLQKKMTECSKQELDIIFNSLYPSLNELVFDQSANFVIQKLCETATEEQQQKFLK--- 147
Query: 64 FQDQLFLLASVDKFGSSSV-----KKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F L+ ++ S+ ++ I+ + + + +ALK L +++ G+
Sbjct: 148 -----FFLSDLNNIVDHSIACRVLQRFIETTQKEN--IEKLFNALKPNLMSLCLSQNGNH 200
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
++ + + S K + I A L + LA GC + D K + + I+ + N
Sbjct: 201 IVQRFVM-SLPSKLNVIIDAILPSVVPLAIDNCGCRIVQRLFDQYKIEQLESIVAEVMRN 259
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQN 236
A L+ ++ GNYVVQ++L I + A +G + SL K S V++K ++ +
Sbjct: 260 AVELATNQYGNYVVQYILASNKHEHISNLLKAFKGRFYQFSLHKFASNVIEKCIRGASEE 319
Query: 237 AVHYIVEELL------NSDQILQVASDKYGNYVIQ 265
I E++ N+ +I + D++GNYVIQ
Sbjct: 320 ERMEIFPEIIGSAPDFNATRISTMVEDQFGNYVIQ 354
>gi|343413307|emb|CCD21355.1| pumillio RNA binding protein 4, putative [Trypanosoma vivax Y486]
Length = 1027
Score = 60.8 bits (146), Expect = 8e-07, Method: Composition-based stats.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 11/207 (5%)
Query: 33 LMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQS 92
+M QYG F+ K +E +++ L +L+ L +A V G+ +V+KLI + +S
Sbjct: 544 VMMNQYGNFLVQKLLEIAPDAE-RLNMLEDYLSSSLCEIA-VSPHGNYAVQKLIDSL-RS 600
Query: 93 PPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQG 152
V AL+R + LMM GS V+LK L+ F+Y +E + L +QG
Sbjct: 601 QHETKVVCDALRRKARLLMMDPKGSHVVLKLLQCVQQKDVVFLYDLIVEQTVILCNDKQG 660
Query: 153 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP----FLIDAIC 208
C + +D+ + ++ I N L+ GNYVV H+++ + ++D
Sbjct: 661 CCVVQKCMDHASPDQLLRLQQAILKNIIPLAMDPFGNYVVTHLISSCNSSGQCHVVDEA- 719
Query: 209 FALR-GHYVDLSLT-KCGSFVVQKFLK 233
ALR GH ++L T K S VV+K ++
Sbjct: 720 -ALRVGHVIELLCTSKFASNVVEKIVQ 745
>gi|25150422|ref|NP_508980.2| Protein PUF-9 [Caenorhabditis elegans]
gi|351061611|emb|CCD69461.1| Protein PUF-9 [Caenorhabditis elegans]
Length = 703
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 138/312 (44%), Gaps = 21/312 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL R +F V ELM+ +G +V KF E N Q ++
Sbjct: 354 QHGSRFIQQKLERASLRDKAAIFTPVLENAEELMTDVFGNYVIQKFFEFGNNEQRNQLVG 413
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
T + + LA + +G ++K ++ V + + ++ ++ + + G+ VI
Sbjct: 414 --TIRGNVMKLA-LQMYGCRVIQKALEYVEEK--YQHEILGEMEGQVLKCVKDQNGNHVI 468
Query: 121 LKCLEPSYNHKNDFIYQAAL----EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLIS 176
K +E + FI A ++ L+ H GC + ++ +++ +L +
Sbjct: 469 QKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQKQPVLDALQ 528
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAIC-FALRGHYVDLSLTKCGSFVVQKFLKYQ 235
++ L + GNYV+QHV+ P + I + + + K S V++K L +
Sbjct: 529 IHLKQLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQHKFASNVIEKCLTFG 588
Query: 236 NAV--HYIVEELLN-----SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQ 288
+ I++++ S +LQ+ D + NYV+Q L Q R +++ ++
Sbjct: 589 GHAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDVADPQHR----KKITLTIK 644
Query: 289 QHLAALRVMKYG 300
H+A LR +G
Sbjct: 645 PHIATLRKYNFG 656
>gi|429848383|gb|ELA23874.1| mRNA binding protein pumilio [Colletotrichum gloeosporioides Nara
gc5]
Length = 853
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 16/274 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S D++F + +LM +G +V KF E N Q+ +L
Sbjct: 477 QHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGN--QVQKKVL 534
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ L S+ + V+K ++ +V Q L+ + + ++ K + G+
Sbjct: 535 ASQMKGKVVDL-SMQMYACRVVQKALEHVLVEQQAELVKELEPEIVKVVK----DQNGNH 589
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E H +FI + LA H C + ++ ++ IL + +
Sbjct: 590 VVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQDKETILGELHNS 649
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
SL + GNYVVQH++ P I + V LS K S VV+K +++ A
Sbjct: 650 TQSLITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQLVTLSKHKFASNVVEKCIQFGTAE 709
Query: 239 HY------IVEELLNSDQILQ-VASDKYGNYVIQ 265
I + + LQ + D+YGNYVIQ
Sbjct: 710 ERKGIREQITSQASDGTSSLQLMMKDQYGNYVIQ 743
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 184 RHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYI 241
+ ++GN+VVQ ++ L I+ I + RG L+ V+Q+ L+Y + I
Sbjct: 583 KDQNGNHVVQKIIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQDKETI 642
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
+ EL NS Q L +D+YGNYV+Q + +DR + Q ++++ L L K+ S
Sbjct: 643 LGELHNSTQSL--ITDQYGNYVVQHIIEHGKPEDRSRIIQLVISQ----LVTLSKHKFAS 696
Query: 302 N 302
N
Sbjct: 697 N 697
Score = 43.9 bits (102), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + Q+ I NA L + GNYV+Q +
Sbjct: 469 HVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQ 528
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE---ELLN--SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE EL+ +I++V
Sbjct: 529 VQKKVLASQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVKELEPEIVKVVK 583
Query: 257 DKYGNYVIQTALVETMRQDRLS----VHQRLVTKLQQHLAALRV----MKYGSNKE 304
D+ GN+V+Q ++E + + ++ + V+ L H+ A RV ++YG+ ++
Sbjct: 584 DQNGNHVVQK-IIELVPRHYINFIMDSFRGQVSTLASHMYACRVIQRMLEYGTEQD 638
>gi|269864285|ref|XP_002651521.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
gi|220064375|gb|EED42535.1| maternal pumilio protein [Enterocytozoon bieneusi H348]
Length = 331
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 124/278 (44%), Gaps = 24/278 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+++Q +L S + + + F + F +L +G +V K I + ++
Sbjct: 54 QEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKEYDILCK 113
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ F ++LL S +G ++KLI + + ++S L+ L+ + G+ VI
Sbjct: 114 R--FSGSIYLL-STHIYGCRVIQKLIDFITD----ITFIISELQDHILELIASPNGNHVI 166
Query: 121 LKCLEPSYNHKNDFIYQAAL---EHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
KC++ S FI + C+ L+ GC L + + ++L +I
Sbjct: 167 QKCIDRSIIENKIFINNIINEFEKDCISLSQQRYGCRVLQRLFEISAPEKVDRLLGIIVD 226
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFA-LRGHYVDLSLTKCGSFVVQKFLKYQN 236
N L R GNYV+QH+ ++ + I F + + V+LS K S V++K + N
Sbjct: 227 NIQELINDRYGNYVIQHL--IQSNYKQKEIIFKYIISNAVELSRYKFSSNVIEKCVV--N 282
Query: 237 AVHYIVEELL---------NSDQILQVASDKYGNYVIQ 265
A +E+ L N + + +D Y NYV+Q
Sbjct: 283 ASKRELEQFLESFAQLAENNKPALFYMCTDMYANYVVQ 320
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 145 YLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFL 203
+ C +Q G + N +D+ G + I LS + GNYV+Q ++ L
Sbjct: 48 FKVCQDQEGSRFIQNQLDSWSGKDIVEFFSEIEPFVLDLSMNLFGNYVIQKIIPLLTVKE 107
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYV 263
D +C G LS G V+QK + + + +I+ EL D IL++ + GN+V
Sbjct: 108 YDILCKRFSGSIYLLSTHIYGCRVIQKLIDFITDITFIISEL--QDHILELIASPNGNHV 165
Query: 264 IQTAL 268
IQ +
Sbjct: 166 IQKCI 170
>gi|68467297|ref|XP_722310.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
gi|68467526|ref|XP_722196.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444151|gb|EAL03428.1| hypothetical protein CaO19.4991 [Candida albicans SC5314]
gi|46444276|gb|EAL03552.1| hypothetical protein CaO19.12458 [Candida albicans SC5314]
Length = 938
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 22 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 81
+F + +EL+ +G ++ K I CNES L L++ Q LF + S+++ G+ +
Sbjct: 321 IFNQIYSHVYELIVDPFGNYLIQKLIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRA 377
Query: 82 VKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALE 141
++K+I + S L ++ LK L+ G+ VI K L FIY + ++
Sbjct: 378 LQKIIDSLNNSHQLGL-LIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIID 436
Query: 142 HCLYLACHEQGCINLNNFIDNMK----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
+A H+ GC L ++++ G + IL N L + GNYV+Q++++
Sbjct: 437 DLYIVATHKHGCCVLQKCLNHVTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLIS 494
Query: 198 LEDPFLIDAICFALRGHYVDLSLT-----KCGSFVVQKFLK-----------YQNAVHYI 241
+ +D I F + ++V+ ++ K S VV+KFLK + N +
Sbjct: 495 INS---LD-INFQIFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFEL 550
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ +L SD + + +D YGNYVIQT +++ M +++ + KL
Sbjct: 551 IYIILVSD-LNVLINDPYGNYVIQT-MIDIMVNPQVNYQNNNIDKL 594
>gi|67475695|ref|XP_653533.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470496|gb|EAL48147.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449704716|gb|EMD44904.1| pumilio family RNA-binding protein, putative [Entamoeba histolytica
KU27]
Length = 484
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 143/310 (46%), Gaps = 25/310 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ L + +++LF + +FELM+ +G +V K IE I
Sbjct: 175 QQGSRRIQQFLDTAQPNEIEELFEFIIKDSFELMTDLFGNYVIQKLIE------YGTIEH 228
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGS 117
K F + + + S+ +G ++K + ++ L + +K + + G+
Sbjct: 229 KHQFMEIIKGHVVELSLHTYGCRVIQKACEFISGEE--LGIIAEEIKGHIVEFVEDQNGN 286
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E + + I + + + H GC + I+ + + I +
Sbjct: 287 HVIQKFIEFMPSTYSSLIANEISGYIISFSKHAYGCRVVQKLIERKEPLIQNVITSELKN 346
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL----- 232
N L+ ++ GNYV+QH+L + + + ++G + + S+ K S VV+K +
Sbjct: 347 NIWDLAVNQYGNYVIQHLLENGNQQQHNLVISEMKGKFCEYSMKKYSSNVVEKCVHCCTS 406
Query: 233 -KYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLS--VHQRLVTKLQQ 289
+ N + I + N + +L++ D Y NYVIQT LVE M D+ S + Q ++
Sbjct: 407 AQRDNFIDEICSKKDN-EMLLKLMKDPYANYVIQT-LVEVMDDDQRSKFIEQNILP---- 460
Query: 290 HLAALRVMKY 299
++++LR + Y
Sbjct: 461 NVSSLRRVSY 470
>gi|398010231|ref|XP_003858313.1| hypothetical protein, conserved [Leishmania donovani]
gi|322496520|emb|CBZ31589.1| hypothetical protein, conserved [Leishmania donovani]
Length = 481
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 96/187 (51%), Gaps = 13/187 (6%)
Query: 129 NHKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+HK+D I + C +L+ +QGCI + I+ K ++++ ++ + ++L+++
Sbjct: 278 HHKSDALMPIVEVVTSDCQHLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPLLSTLAKN 337
Query: 186 RSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAV-HYIV 242
+ GNYVVQ +L N+E ++ + + +GH+V+LS K S V++K + Q ++ IV
Sbjct: 338 QFGNYVVQCILKNMEGYVSLNDLVASFQGHWVELSCDKYSSNVMEKIVGMLQGSLRQRIV 397
Query: 243 EELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
EL+ LQ + + +GNYV+Q + + Q + VT L L YG
Sbjct: 398 NELIFDVAHLQCLMQNSFGNYVLQAVIGSAVNQYEYGLIYDAVTPL------LHTSPYGH 451
Query: 302 NKEIQKK 308
E + K
Sbjct: 452 RIEAKLK 458
>gi|156845539|ref|XP_001645660.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
gi|156116326|gb|EDO17802.1| hypothetical protein Kpol_541p44 [Vanderwaltozyma polyspora DSM
70294]
Length = 756
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 41/303 (13%)
Query: 3 GSQYLQEKLSSGDSRIL--DKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G ++LQ+KL S ++ D L+ + +LM +G ++ K E N SQ +LII
Sbjct: 125 GCRFLQKKLESPSESMIVKDVLYEQIKPIILDLMLDPFGNYLIQKLSEYINSSQRSLIIQ 184
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL------LYHVMSALKRLFKFLMMTK 114
I +F L S++++G+ S +K+I + + + +K++ L+
Sbjct: 185 SI--YPHVFQL-SINQYGTRSFQKIIDTIDNEAQIDMIIKGFEQEYTTIKQIVT-LINDL 240
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAAL--EHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI KC+ K +FI A + ++ + ++ H+ GC L + + +I
Sbjct: 241 NGNHVIQKCILKFPTSKFNFIINAMVHEDNIIAISTHKHGCCVLQKLLSVSTLQQFFKIS 300
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLE--DPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
I +L + GNY++Q +L++ D +L+ I + LS K S V++K
Sbjct: 301 IKIVEYLPNLINDQFGNYIIQFLLDVRELDFYLVSEIYKKIELSLCQLSRLKFSSNVIEK 360
Query: 231 FLK--YQNAVHYIV----------EEL-------------LNSDQILQVASDKYGNYVIQ 265
F+K Y+ YI+ ++L L ++ + + D YGNYV+Q
Sbjct: 361 FIKKIYKVMTSYIIPRKESSSNTSDDLFISTVGILFSIIDLFTNNLSNIIRDNYGNYVLQ 420
Query: 266 TAL 268
T L
Sbjct: 421 TLL 423
>gi|213404970|ref|XP_002173257.1| meiotic PUF family protein [Schizosaccharomyces japonicus yFS275]
gi|212001304|gb|EEB06964.1| meiotic PUF family protein [Schizosaccharomyces japonicus yFS275]
Length = 564
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 140/317 (44%), Gaps = 35/317 (11%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQL---ALII 59
S +LQ KL S ++ ++ V +T+ L ++G F+ K E C Q+ AL+I
Sbjct: 246 ASVFLQLKLKSENANTCHQISQSVLPYTYSLAVNRFGNFLVQKCFEYCTPEQMNEFALVI 305
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFL---MMTKPG 116
+ + S FG V++ + ++ H ++ ++ L + ++ +
Sbjct: 306 YRHIHE------LSAHAFGCHVVQRALDFMSAD-----HRLAVIRELIQHAESSILRRNS 354
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLY-----LACHEQGCINLNNFIDNMKGSRRKQI 171
V K L+ + FI + L L +A E G + + N +N +
Sbjct: 355 CHVWQKLLDMRWPEHTSFIM-SQLNVLLRGKWAEIAMSEMGSLVVQNIFENCESKDETLC 413
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
I A ++ + GN+V+QH++ + + + L + + S + S V++K
Sbjct: 414 KTEILFQADAILCGQWGNWVIQHIVEHGNEVEQEYLRKLLLSNSIRYSTHQFASKVIEKA 473
Query: 232 LKY--QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMRQDRLSVHQRL 283
L+ +N V +EEL+ + Q ++ VASD+YGNY+IQ L R +R+
Sbjct: 474 LRTGPENFVESYIEELMTARQQKVRIPLITVASDQYGNYIIQYLLQTCSVLQR----KRI 529
Query: 284 VTKLQQHLAALRVMKYG 300
+L +H+ +LR K+G
Sbjct: 530 AEQLGKHVVSLRGNKFG 546
>gi|72391604|ref|XP_846096.1| pumilio/PUF RNA binding protein 5 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175648|gb|AAX69780.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma brucei]
gi|70802632|gb|AAZ12537.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 430
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 130 HKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
HK+D I +A + LA +QGCI + I+N +++ I+ + +L+ +
Sbjct: 240 HKSDALTPIVEAIAQDSQLLAQRQQGCITIIRTIENTLPHQQRFIISRLLPALPALTMNC 299
Query: 187 SGNYVVQHVLNLEDPFLID-AICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV---HYIV 242
GNYVVQ VL+ DP + +C A GH+V LS K S VV+K ++ I
Sbjct: 300 YGNYVVQCVLHHMDPEAVTVVVCHAFAGHWVALSCNKFASNVVEKVVRVLEGPARRALIA 359
Query: 243 EELLNSDQILQVASDKYGNYVIQ 265
E + + + ++ +D +GN+V+Q
Sbjct: 360 ETVCDPVNLRRLMNDCFGNFVLQ 382
>gi|294656065|ref|XP_458303.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
gi|199430829|emb|CAG86381.2| DEHA2C14278p [Debaryomyces hansenii CBS767]
Length = 658
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 40/294 (13%)
Query: 3 GSQYLQEKLSSG---DSRILDKLFWV----VSGFTFELMSGQYGRFVFGKFIESCNESQL 55
G ++LQ+K+ S+I + F V V F +EL+ +G ++ K I+ C+++ L
Sbjct: 147 GCRFLQKKIDENVIPSSQIRTENFKVIFKEVYPFIYELIIDPFGNYLVQKLIDYCDDANL 206
Query: 56 ALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
+L IL+I Q LF + S+++ G+ +++K+I + L ++S L L+
Sbjct: 207 SL-ILEI-LQYNLFQI-SINQHGTRALQKIINSLNNDYQLSL-LISGLNPFIIELIKDLN 262
Query: 116 GSSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLN---NFIDNMKGSRRKQI 171
G+ VI K L Y+ +N FIY + + +A H+ GC L N +++M+ + Q
Sbjct: 263 GNHVIQKILN-KYSPENCQFIYDSIINDLYVVATHKHGCCVLQKCLNHVNSMQLVQFSQK 321
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGH-------YVDLSLTKCG 224
+ + L+ + GNYV+Q++++ I++I L+ + +L K
Sbjct: 322 ILMFDT-FRKLTNDQFGNYVLQYLIS------INSISINLKMYENFMKFGVNNLCNLKFS 374
Query: 225 SFVVQKFLK--YQNAVHYIVEELLNSDQILQVA--------SDKYGNYVIQTAL 268
S VV+KFLK Y N + L + LQV +D +GNYVIQT +
Sbjct: 375 SNVVEKFLKNCYVNEPNSPAFSNLKLELCLQVMQGDLNKMINDPFGNYVIQTLI 428
>gi|145509346|ref|XP_001440614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407837|emb|CAK73217.1| unnamed protein product [Paramecium tetraurelia]
Length = 648
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 143/300 (47%), Gaps = 15/300 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q+ ++ LD+L + +LM Y ++FG +SC Q L IL
Sbjct: 342 QHGSRLIQKYFTTCTQIELDQLLQEIGPHLPDLMIDPYANYMFGSLSQSCAPHQ-RLYIL 400
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ T ++L +A DK G+ +++ L+ +++ Q + V +++K L + G+
Sbjct: 401 Q-TIGNRLVDIA-CDKKGTHAIQSLVSLISCKQEEEM---VENSIKNNIIPLTLDSQGTH 455
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQ--ILHLIS 176
+I K + + ++I+ ++ + + H+ G L + I K + K I++ +
Sbjct: 456 LIKKIIARFSEDRLNYIFHKLMDRFIQVVNHQFGLCVLKDLITKFKNNLEKSAIIINRMK 515
Query: 177 VNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK-FLKYQ 235
+ + + GNY VQHV+++ + I + + LS+ K S VV+K L+
Sbjct: 516 DHLDEIIQDPFGNYGVQHVIDVYGDLRCNCIIDKILLKLIQLSIHKYSSNVVEKCILETS 575
Query: 236 NAVHYIVEELLNSDQI-LQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAAL 294
+ L+ D I L++ +K+G +V+Q AL E D+LS L L ++L ++
Sbjct: 576 PKTQKRFIKQLSQDIICLELMKNKFGTFVLQKALQEA---DKLSETDSLQQALYRNLPSI 632
>gi|336367609|gb|EGN95953.1| hypothetical protein SERLA73DRAFT_111921 [Serpula lacrymans var.
lacrymans S7.3]
Length = 372
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL + S +F +V T +L+ +G +V K E + +Q+ +
Sbjct: 47 QHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQKLFE--HGTQVQKTV 104
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMT 113
L T + + L S+ +G V+K ++ V A L HV+ +K
Sbjct: 105 LANTMEGHVLPL-SLQMYGCRVVQKAVEYVLPEQQGAFVKELEPHVLKCVK--------D 155
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI K +E + FI + +Y L+ H GC L +++ + + +L
Sbjct: 156 ANGNHVIQKLIERVSPERLAFI--NSFRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPLL 213
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ +L + + GNYVVQ VL + LRG + ++ K S V +K L
Sbjct: 214 DELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASNVCEKAL 273
Query: 233 KYQNA--VHYIVEELLNS-----DQILQVASDKYGNYVIQTAL--VETMRQDRL 277
+A ++EE++ I+ + D++ NYV+Q AL VE +++RL
Sbjct: 274 MTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGVVEGEQRERL 327
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + H L L+ GC + ++ + ++ + +
Sbjct: 86 GNYVIQKLFEHGTQVQKTVLANTMEGHVLPLSLQMYGCRVVQKAVEYVLPEQQGAFVKEL 145
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + +GN+V+Q ++ P + A + RG+ DLS G V+Q+ ++
Sbjct: 146 EPHVLKCVKDANGNHVIQKLIERVSPERL-AFINSFRGNVYDLSTHPYGCRVLQRCFEHL 204
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ +++EL ++ + D++GNYV+Q L DR V + KL+ +
Sbjct: 205 PEDQTRPLLDEL--HRYMINLMQDQFGNYVVQFVLEHGKATDRAQV----ILKLRGQILQ 258
Query: 294 LRVMKYGSN 302
+ K+ SN
Sbjct: 259 MARHKFASN 267
>gi|336380323|gb|EGO21476.1| hypothetical protein SERLADRAFT_473873 [Serpula lacrymans var.
lacrymans S7.9]
Length = 360
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 30/294 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL + S +F +V T +L+ +G +V K E + +Q+ +
Sbjct: 35 QHGSRFIQQKLETATSEEKQLMFDEIVPNNTLQLIQDVFGNYVIQKLFE--HGTQVQKTV 92
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMT 113
L T + + L S+ +G V+K ++ V A L HV+ +K
Sbjct: 93 LANTMEGHVLPL-SLQMYGCRVVQKAVEYVLPEQQGAFVKELEPHVLKCVK--------D 143
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI K +E + FI + +Y L+ H GC L +++ + + +L
Sbjct: 144 ANGNHVIQKLIERVSPERLAFI--NSFRGNVYDLSTHPYGCRVLQRCFEHLPEDQTRPLL 201
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ +L + + GNYVVQ VL + LRG + ++ K S V +K L
Sbjct: 202 DELHRYMINLMQDQFGNYVVQFVLEHGKATDRAQVILKLRGQILQMARHKFASNVCEKAL 261
Query: 233 KYQNA--VHYIVEELLNS-----DQILQVASDKYGNYVIQTAL--VETMRQDRL 277
+A ++EE++ I+ + D++ NYV+Q AL VE +++RL
Sbjct: 262 MTADADSRRILIEEIMTPKADGVSPIVTMMKDQFANYVLQRALGVVEGEQRERL 315
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 83/189 (43%), Gaps = 9/189 (4%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + H L L+ GC + ++ + ++ + +
Sbjct: 74 GNYVIQKLFEHGTQVQKTVLANTMEGHVLPLSLQMYGCRVVQKAVEYVLPEQQGAFVKEL 133
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY- 234
+ + +GN+V+Q ++ P + A + RG+ DLS G V+Q+ ++
Sbjct: 134 EPHVLKCVKDANGNHVIQKLIERVSPERL-AFINSFRGNVYDLSTHPYGCRVLQRCFEHL 192
Query: 235 -QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAA 293
++ +++EL ++ + D++GNYV+Q L DR V + KL+ +
Sbjct: 193 PEDQTRPLLDEL--HRYMINLMQDQFGNYVVQFVLEHGKATDRAQV----ILKLRGQILQ 246
Query: 294 LRVMKYGSN 302
+ K+ SN
Sbjct: 247 MARHKFASN 255
>gi|388583020|gb|EIM23323.1| ARM repeat-containing protein [Wallemia sebi CBS 633.66]
Length = 373
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 126/274 (45%), Gaps = 13/274 (4%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL + L ++F + T EL S +G +V K E + Q ++ KI
Sbjct: 53 GSRFIQQKLDNAPPESLMRVFEEIFPNTVELSSDVFGNYVIQKLFEHGTQDQRLRLVNKI 112
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILK 122
+D + L S +G V+K I+ V ++ L ++ ++ + + + + + VI +
Sbjct: 113 --KDCVPTL-SFQMYGCRVVQKAIECVEEAEQL--ELVKRVETITERAVQDQNANHVIQR 167
Query: 123 CLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASL 182
+E K + + LA H GC L +++ +R ++++ + + +L
Sbjct: 168 IIERVDPDKLGNFPEVFANNAKELATHPYGCRVLQRSFEHIGQARSRELIEQLHESVDNL 227
Query: 183 SRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA----- 237
GNYVVQ++L I + + +L+ K S V +K L N
Sbjct: 228 VVDMFGNYVVQYLLEFGTDEDRSRIVVKINQRFFELARHKFASNVCEKALIKANEKDKEM 287
Query: 238 -VHYIVE--ELLNSDQILQVASDKYGNYVIQTAL 268
++ +++ + + D I + D++GNYV+Q A+
Sbjct: 288 LIYRLIDRSDEASVDGIPSLMKDQFGNYVLQRAI 321
>gi|409194216|gb|AFV31434.1| pumilio [Hydractinia echinata]
Length = 979
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 1 EEGSQYLQEKLSSGDSRILDK--LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI 58
+ GS+++Q+KL + IL+K +F + + LM+ +G +V KF E + Q L+
Sbjct: 736 QHGSRFIQQKLER--ASILEKNMVFNEILTAAYSLMTDVFGNYVIQKFFEFGSPEQKLLL 793
Query: 59 ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+I L ++ +G ++K ++ + + ++ L + + G+
Sbjct: 794 AQRIKGH---VLPLALQMYGCRVIQKALETIPPEMTIHSELVRELDGHVLKCVKDQNGNH 850
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ KC+E + + FI A L+ H GC + +++ + IL + +
Sbjct: 851 VVQKCIECVDSVQLQFIIDAFQGQVFALSTHPYGCRVIQRILEHCTTEQTSPILGELHEH 910
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK 230
L + + GNYV+QHVL I +RG+ + LS K S V++K
Sbjct: 911 TERLIQDQYGNYVIQHVLEHGSADDKSTIVNIVRGNVLLLSQHKFASNVIEK 962
Score = 44.7 bits (104), Expect = 0.059, Method: Composition-based stats.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNM--KGSR 167
LM G+ VI K E + + Q H L LA GC + ++ + + +
Sbjct: 768 LMTDVFGNYVIQKFFEFGSPEQKLLLAQRIKGHVLPLALQMYGCRVIQKALETIPPEMTI 827
Query: 168 RKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFV 227
+++ + + + ++GN+VVQ + D + I A +G LS G V
Sbjct: 828 HSELVRELDGHVLKCVKDQNGNHVVQKCIECVDSVQLQFIIDAFQGQVFALSTHPYGCRV 887
Query: 228 VQKFLKY--QNAVHYIVEELL-NSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV 284
+Q+ L++ I+ EL ++++++Q D+YGNYVIQ L D+ ++ V
Sbjct: 888 IQRILEHCTTEQTSPILGELHEHTERLIQ---DQYGNYVIQHVLEHGSADDKSTI----V 940
Query: 285 TKLQQHLAALRVMKYGSN 302
++ ++ L K+ SN
Sbjct: 941 NIVRGNVLLLSQHKFASN 958
>gi|302410901|ref|XP_003003284.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
gi|261358308|gb|EEY20736.1| pumilio domain-containing protein [Verticillium albo-atrum
VaMs.102]
Length = 852
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 138/309 (44%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S D++F + +LM +G +V KF E N Q+ +L
Sbjct: 463 QHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGN--QVQKKVL 520
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ ++ L S+ + V+K ++ +V Q L+ + + ++ K + G+
Sbjct: 521 AAQMKGKVVDL-SMQMYACRVVQKALEHVLVEQQAELVDELQPDIVKVVK----DQNGNH 575
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DF+ + LA H GC + ++ ++ IL + +
Sbjct: 576 VVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQDKEVILTELHNS 635
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
A L + GNYV QHV+ P + + V LS K S VV+K +++ +
Sbjct: 636 AQVLITDQYGNYVTQHVIQHGKPEDRAKMIHLVTSQLVTLSKHKFASNVVEKCIEHGSPE 695
Query: 239 HY--IVEELL----NSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
I E+L + LQ + D+YGNYVIQ L + DR + + +++
Sbjct: 696 ERKSIREQLTTMGPDGTSPLQLMMKDQYGNYVIQKLLNQLDGGDR----EAFIEEMKPQF 751
Query: 292 AALRVMKYG 300
AL+ G
Sbjct: 752 IALKKTSTG 760
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + QI I NA L + GNYV+Q +
Sbjct: 455 HVVEFSGDQHGSRFIQQKLETANSDEKDQIFREIEPNAVQLMKDVFGNYVIQKFFEHGNQ 514
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE---ELLNSDQ--ILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE EL++ Q I++V
Sbjct: 515 VQKKVLAAQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVDELQPDIVKVVK 569
Query: 257 DKYGNYVIQTALVETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNKE 304
D+ GN+V+Q + RQ D + + V++L H RV ++YG++++
Sbjct: 570 DQNGNHVVQKVIELVPRQYIDFVMDSFRGQVSQLAAHTYGCRVIQRMLEYGTDQD 624
>gi|238878269|gb|EEQ41907.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 965
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 32/286 (11%)
Query: 22 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 81
+F + +EL+ +G ++ K I CNES L L++ Q LF + S+++ G+ +
Sbjct: 322 IFNQIYSHVYELIVDPFGNYLIQKLIVYCNESNLDLLME--ILQYNLFQI-SINQHGTRA 378
Query: 82 VKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALE 141
++K+I + S L ++ LK L+ G+ VI K L FIY + ++
Sbjct: 379 LQKIIDSLNNSHQLGL-LIKGLKPYIIELIKDLNGNHVIQKILNKYEPPDCQFIYDSIID 437
Query: 142 HCLYLACHEQGCINLNNFIDNMK----GSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
+A H+ GC L ++++ G + IL N L + GNYV+Q++++
Sbjct: 438 DLYIVATHKHGCCVLQKCLNHVTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQYLIS 495
Query: 198 LEDPFLIDAICFALRGHYVDLSLT-----KCGSFVVQKFLK-----------YQNAVHYI 241
+ +D I F + ++V+ ++ K S VV+KFLK + N +
Sbjct: 496 INS---LD-INFQIFQNFVNFGISNLCNLKFSSNVVEKFLKNCYANESVNVSFSNLKFEL 551
Query: 242 VEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
+ +L SD + + +D YGNYVIQT +++ M +++ + KL
Sbjct: 552 IYIILVSD-LNVLINDPYGNYVIQT-MIDIMVNPQVNYQNNNIDKL 595
>gi|237840953|ref|XP_002369774.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|211967438|gb|EEB02634.1| pumilio-family RNA binding repeat domain-containing protein
[Toxoplasma gondii ME49]
gi|221483718|gb|EEE22030.1| pumilio, putative [Toxoplasma gondii GT1]
Length = 1913
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 119/271 (43%), Gaps = 20/271 (7%)
Query: 6 YLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQ 65
+LQE+L + + + + +L Q+G +V KF E+ + + + ++T
Sbjct: 1009 FLQEQLETCPLADRVPILFQLLPHALDLAVDQHGNYVLQKFFETGCDKEKEWLAAQLT-- 1066
Query: 66 DQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLE 125
D +F L S++ +G +++ ++ + P ++ LK + + G+ VI KC E
Sbjct: 1067 DHVFRL-SLEVYGCRVIQRAVESLPV--PAQLRLVRELKDHVITCVEDQHGNHVIQKCAE 1123
Query: 126 PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+ FI A ++ H GC + ++ S+ ++ ++ L R
Sbjct: 1124 RLPSPSVQFIIDAFKGQEARMSVHSYGCRVIQRLLEACPMSQVAALIDVVMAELCMLIRD 1183
Query: 186 RSGNYVVQHVLNL----EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ---NAV 238
+ GNYVVQHVL + +ID +C + + LS K VV++ L A
Sbjct: 1184 QFGNYVVQHVLEFGRDADKMKIIDFMCEDI----IALSTEKYACNVVERALTLNAMGRAR 1239
Query: 239 HYIVEELLNSDQILQ----VASDKYGNYVIQ 265
I+ L + + Q V D+YGNYV+Q
Sbjct: 1240 RRIITAALGPEMMGQPLKMVMLDRYGNYVVQ 1270
>gi|115504333|ref|XP_001218959.1| pumillio RNA binding protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|83642441|emb|CAJ16404.1| pumillio RNA binding protein, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 667
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHV---LNL 198
H YLA +QGCI+ + ++ +++KQ++ + A ++ GNYVVQ + + L
Sbjct: 367 HSRYLAATQQGCISFMHILEFCNEAQKKQLISPLVPYFAHVALDPFGNYVVQRIIQSIGL 426
Query: 199 EDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI----VEELLNSDQILQ- 253
+ I + CFA G +++S K GS VV++ +K V + +EEL++ LQ
Sbjct: 427 DASEYITS-CFA--GELLNMSCNKFGSNVVEETIKVCGGVPAVRRLLMEELISKPGALQR 483
Query: 254 VASDKYGNYVIQTALVETMRQDRLS-VHQRLVTKLQQHLAALRV 296
+ D +GN+V+QT + Q+ L V++RL LQ A R+
Sbjct: 484 LVQDSFGNFVVQTFIGSITDQNELKYVNERLRPVLQNSPYAARI 527
>gi|440299619|gb|ELP92171.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 408
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 118/271 (43%), Gaps = 13/271 (4%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q K+ + S D +F + L + +V K E Q + +
Sbjct: 99 QSGSRVVQHKIETSTSD-RDAIFDGIEAEAVHLSKDVFANYVIQKLFEFGTVWQKSQLTK 157
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++T F+ S+ +G V+K I+ V + + ++ + + G+ VI
Sbjct: 158 RLT---GCFVELSLHMYGCRVVQKAIEFVDDIDKRT--IFNEIEENIVACIQDQNGNHVI 212
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E D I A L + H GC + ++ + + +L I N
Sbjct: 213 QKCVEKGDTRIIDAIISAFQGRVLAFSQHPYGCRVIQRILEKIPTEKSYPLLQEILPNTL 272
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA--V 238
LS+ + GNYV+Q+++ P I AL+G +LS+ K S V++K NA
Sbjct: 273 ELSKDQYGNYVIQYIVE-RCPTERTKIRRALQGSIAELSMQKYSSNVIEKCFMCANAKGR 331
Query: 239 HYIVEELLNSDQ----ILQVASDKYGNYVIQ 265
+++E+ + + +L + D+Y NYV+Q
Sbjct: 332 QEMLKEIYGTKREGTPLLMMMRDQYANYVVQ 362
>gi|449488821|ref|XP_004176337.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1, partial
[Taeniopygia guttata]
Length = 1076
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 71/298 (23%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 3 GSQ-YLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN-ESQLALIIL 60
G+Q ++Q KL +F + ++LM +G +V KF E + E +LAL
Sbjct: 724 GTQGFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLAL--- 780
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP---------LLYHVMSALKRLFKFLM 111
+ + LA + +G ++K ++ + PP L HV+ +K
Sbjct: 781 AERIRGHVLSLA-LQMYGCRVIQKALEFI---PPDQQNEMVRELDGHVLKCVK------- 829
Query: 112 MTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
+ G+ V+ KC+E FI A L H GC + +++ + I
Sbjct: 830 -DQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALXTHPYGCRVIQRILEHCLPEQTLPI 888
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
L + + L + + GNYV+QHVL P I +RG+ + LS K S VV+K
Sbjct: 889 LEELLQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKC 948
Query: 232 LKYQNAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQ 281
+ + + +++E+ + + + D+Y NYV+Q + V Q ++ +H+
Sbjct: 949 VTHASRTERAMLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHK 1006
>gi|301777185|ref|XP_002924016.1| PREDICTED: pumilio homolog 1-like [Ailuropoda melanoleuca]
Length = 1114
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 133/314 (42%), Gaps = 30/314 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL +F + ++LM +G +V KF E + Q +
Sbjct: 788 QHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAE 847
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
+I L ++ +G ++K ++ + L HV+ +K +
Sbjct: 848 RIRGH---VLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVK--------DQ 896
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 897 NGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEE 956
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL P I +RG+ + LS K S VV+K + +
Sbjct: 957 LHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTH 1016
Query: 235 QNAVH--YIVEELLNSDQILQVA-----SDKYGNYVIQTAL-VETMRQDRLSVHQRLVTK 286
+ +++E+ + A D+Y NYV+Q + V Q ++ +H K
Sbjct: 1017 ASRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----K 1071
Query: 287 LQQHLAALRVMKYG 300
++ H+A LR YG
Sbjct: 1072 IRPHIATLRKYTYG 1085
>gi|261329647|emb|CBH12629.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 430
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 130 HKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
HK+D I +A + LA +QGCI + I+N +++ I+ + +L+ +
Sbjct: 240 HKSDALTPIVEAIAQDSQLLAQRQQGCITIIRTIENTLPHQQRFIISRLLPALPALTMNC 299
Query: 187 SGNYVVQHVLNLEDPFLID-AICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV---HYIV 242
GNYVVQ VL+ DP + +C A GH+V LS K S VV+K ++ I
Sbjct: 300 YGNYVVQCVLHHMDPEAVTVVVCQAFAGHWVALSCNKFASNVVEKVVRVLEGPARRALIA 359
Query: 243 EELLNSDQILQVASDKYGNYVIQ 265
E + + + ++ +D +GN+V+Q
Sbjct: 360 ETVCDPVNLRRLMNDCFGNFVLQ 382
>gi|349605218|gb|AEQ00529.1| Pumilio-like protein 1-like protein, partial [Equus caballus]
Length = 281
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 13/195 (6%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ KC+E FI A L+ H GC + +++ + IL +
Sbjct: 65 GNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPILEEL 124
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ L + + GNYV+QHVL P I +RG+ + LS K S VV+K + +
Sbjct: 125 HQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHA 184
Query: 236 NAVH--YIVEELLNSDQ-----ILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKL 287
+ +++E+ + + + D+Y NYV+Q + V Q ++ +H K+
Sbjct: 185 SRTERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMH-----KI 239
Query: 288 QQHLAALRVMKYGSN 302
+ H+A LR YG +
Sbjct: 240 RPHIATLRKYTYGKH 254
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/243 (20%), Positives = 103/243 (42%), Gaps = 18/243 (7%)
Query: 3 GSQYLQEKLS--SGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
G + +Q+ L D ++++++ + G + + Q G V K IE L II
Sbjct: 27 GCRVIQKALEFIPADQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFII- 85
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
F+ Q+F L S +G ++++++ + Q+ P+L L + + L+ + G+
Sbjct: 86 -DAFKGQVFAL-STHPYGCRVIQRILEHCLPDQTLPIL----EELHQHTEQLVQDQYGNY 139
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL-HLISV 177
VI LE I + L L+ H+ + + + + R ++ + ++
Sbjct: 140 VIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTM 199
Query: 178 NAA------SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
N ++ + + NYVVQ ++++ +P + +R H L G ++ K
Sbjct: 200 NDGPHSALYTMMKDQYANYVVQKMIDVAEPAQRKIVMHKIRPHIATLRKYTYGKHILAKL 259
Query: 232 LKY 234
KY
Sbjct: 260 EKY 262
>gi|261326153|emb|CBH08979.1| pumillio RNA binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 676
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 16/166 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H YLA +QGCI+ + ++ +++KQ++ + A ++ GNYVVQ ++
Sbjct: 371 HSRYLAATQQGCISFMHILEFCNEAQKKQLISPLVPYFAHVALDPFGNYVVQRIIQS--- 427
Query: 202 FLIDA-----ICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYI----VEELLNSDQIL 252
+DA CFA G +++S K GS VV++ +K V + +EEL++ L
Sbjct: 428 IGLDASEYITSCFA--GELLNMSCNKFGSNVVEETIKVCGGVPAVRRLLMEELISKPGAL 485
Query: 253 Q-VASDKYGNYVIQTALVETMRQDRLS-VHQRLVTKLQQHLAALRV 296
Q + D +GN+V+QT + Q L V++RL LQ A R+
Sbjct: 486 QRLVQDSFGNFVVQTFIGSITDQSELKYVNERLRPVLQNSPYAARI 531
>gi|68489418|ref|XP_711460.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
gi|68489451|ref|XP_711443.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432746|gb|EAK92215.1| hypothetical protein CaO19.1795 [Candida albicans SC5314]
gi|46432764|gb|EAK92232.1| hypothetical protein CaO19.9361 [Candida albicans SC5314]
Length = 929
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 30/313 (9%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + ++ELM+ +G +V K+ E +Q +++
Sbjct: 596 QHGSRFIQQKLPEATEEEKETIFNEIWEISYELMTDVFGNYVIQKYFEYGTTTQKQVLLE 655
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ S+ +G V++ ++ + L ++ LK + G+ VI
Sbjct: 656 SMIGHIHEL---SLQMYGCRVVQRALEAIDNEGQL--RIIEELKDHILICCKDQNGNHVI 710
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVNA 179
K +E +L++ +Y L+ H GC + ++ +K IL ++
Sbjct: 711 QKSIEKIKPFSQIRYILTSLDNQIYHLSTHPYGCRVIQRLLEYSDIDDQKLILSQLNNFL 770
Query: 180 ASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY----- 234
L + GNYV+QH+L + I + G V S K S V++K +K+
Sbjct: 771 YYLILDQYGNYVIQHILENGTQEEKEPILEIVLGSVVQFSKHKFASNVIEKCIKFGDINQ 830
Query: 235 -QNAVHYIV---EELLNSDQI-----------LQVASDKYGNYVIQTALVETMRQDRLSV 279
+ +H ++ E +L D I + D++GNYVIQ LVE D
Sbjct: 831 RKRILHEVMLGNETILGDDDIDGEPVKEDSPLALMVKDQFGNYVIQK-LVEAFDGDE--- 886
Query: 280 HQRLVTKLQQHLA 292
+ L+ K+++ L+
Sbjct: 887 RKLLIIKIKKCLS 899
>gi|195572367|ref|XP_002104167.1| GD20820 [Drosophila simulans]
gi|194200094|gb|EDX13670.1| GD20820 [Drosophila simulans]
Length = 701
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI K E + + + H L LA GC + ++++ ++++I+H +
Sbjct: 502 GNYVIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL 561
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ + ++GN+VVQ + DP + I A +G LS G V+Q+ L++
Sbjct: 562 DGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHC 621
Query: 236 NA--VHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDR 276
A I++EL +++Q++Q D+YGNYVIQ L ++D+
Sbjct: 622 TAEQTTPILDELHEHTEQLIQ---DQYGNYVIQHVLEHGKQEDK 662
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 5/196 (2%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + + LM+ +G +V KF E Q + +
Sbjct: 464 QHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGM 523
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
++ + + LA + +G ++K ++ + SP ++ L + + G+ V+
Sbjct: 524 QV--KGHVLQLA-LQMYGCRVIQKALESI--SPEQQQEIVHELDGHVLKCVKDQNGNHVV 578
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ + IL + +
Sbjct: 579 QKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTE 638
Query: 181 SLSRHRSGNYVVQHVL 196
L + + GNYV+QHVL
Sbjct: 639 QLIQDQYGNYVIQHVL 654
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + ++ + I A SL GNYV+Q P
Sbjct: 456 HIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTP 515
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQILQVASDKY 259
+ + ++GH + L+L G V+QK L+ IV EL +L+ D+
Sbjct: 516 EQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHEL--DGHVLKCVKDQN 573
Query: 260 GNYVIQ 265
GN+V+Q
Sbjct: 574 GNHVVQ 579
>gi|145488749|ref|XP_001430378.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397475|emb|CAK62980.1| unnamed protein product [Paramecium tetraurelia]
Length = 452
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 7 LQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQD 66
+Q+ G+ DK+F + L ++G +V K IE+ N++ LI ++
Sbjct: 153 IQQSFIQGNDFQKDKIFKALVDDLPLLSKHKFGNYVIQKIIENSNQNIRTLIFEQLH--- 209
Query: 67 QLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEP 126
+ DKFG +++L++ + + ++ ++K L+ + G+ VI K ++
Sbjct: 210 PFIIEMCYDKFGCRVIQRLLEFIQNHQKI--QLIQSIKSQVLNLIFDQCGNHVIQKIIDL 267
Query: 127 SYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHR 186
+ + +FI + ++ H GC ++ + +Q+ + LS +
Sbjct: 268 ASDA--EFIIDIVTNNVDHIVSHSYGCRIAQKCLEIFPNQKLQQLYVSLIPLCERLSFCQ 325
Query: 187 SGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEE 244
GNY+VQH++N P ++ I ++ V++S K S V QK++ + + I +
Sbjct: 326 YGNYIVQHMINQGPPKGLEVIGKYIKARIVEVSQDKYASIVAQKYITVASDDDIASICKV 385
Query: 245 LLNS---DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
L+N +L + ++++GNYV+Q + + + S+ Q + K + H
Sbjct: 386 LINDCYPPMLLILINNQFGNYVMQNFYQKCNDKQKQSI-QIQINKFEDH 433
>gi|344232856|gb|EGV64729.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 782
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 149/311 (47%), Gaps = 33/311 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +F + ++ELM+ +G +V K+ E + +Q +++
Sbjct: 452 QHGSRFIQQKLPHSSEEEKEVIFNEIRVISYELMTDVFGNYVIQKYFEHGSMTQKKILLE 511
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ ++ L S+ +G V++ ++ + + +++ LK + G+ VI
Sbjct: 512 SML--GHIYEL-SLQMYGCRVVQRALEALELDGQI--KIITELKNHILICAKDQNGNHVI 566
Query: 121 LKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
K +E P N + FI +A +L+ H GC + +++ + + +IL ++
Sbjct: 567 QKSIERIPFENVR--FILEALESQVYHLSTHPYGCRVIQRLLEHSDVADQDKILAELNRF 624
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY---- 234
L + + GNYV+QH+L + +AI + G V+ S K S V++K +K+
Sbjct: 625 IFYLIQDQYGNYVMQHILERGNMVDREAILKVVLGSVVNFSKHKFASNVIEKCIKFGTFE 684
Query: 235 --QNAVHYI--------VEELLNSDQILQVASDKYGNYVIQTALVETM----RQDRLSVH 280
+ +H + +E++ + + + D+Y NYVIQ LVE ++ RL
Sbjct: 685 QRKKILHEVLLGNEDLSIEDVEDDSPLALMMKDQYANYVIQK-LVEGFSSKSQEKRL--- 740
Query: 281 QRLVTKLQQHL 291
LV KL+Q+L
Sbjct: 741 --LVLKLRQYL 749
>gi|326433440|gb|EGD79010.1| hypothetical protein PTSG_11819 [Salpingoeca sp. ATCC 50818]
Length = 903
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 145/316 (45%), Gaps = 28/316 (8%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+ +Q + S + KL V +++M+ +G +V K ++ + + I+
Sbjct: 585 QHGSRMIQHCIESATPAEMHKLLEEVGEQLYQVMTDVFGNYVIQKLLQYGDGTVQHAIVN 644
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKF----LMMTKPG 116
+ + ++ L S+ +G V++++ V + L +++ LK L + L+M +
Sbjct: 645 GM--RGRVPAL-SMHNYGCRVVQEVLATVTSA--ELRNIV--LKELEAYNVSDLIMDQHA 697
Query: 117 SSVILKCLEPSYNHKN-DFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
+ VI KC+ S + N F+ A ++ H GC + I+ + ++ + +
Sbjct: 698 NHVIQKCVT-SLSPDNLGFVISACERQASAMSRHLYGCRVIQRLIEQCESTQLALVYKNV 756
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ ASL ++ GNYV+QHVL D + + G+ + LS K S V++KFL+
Sbjct: 757 LDDCASLMKNAYGNYVIQHVLEHGKQEHRDVVMDCVSGNLLTLSQHKFASNVIEKFLRVA 816
Query: 236 NA--VHYIVEELLNSDQILQVAS---------DKYGNYVIQTALVETMRQDRLSVHQRLV 284
A + +V EL S + + DKY NYVIQT + RQ +++ L+
Sbjct: 817 RADQISSLVAELCRSTALPDGTTAAPLHIMMKDKYANYVIQTLMQFAPRQTQMA----LL 872
Query: 285 TKLQQHLAALRVMKYG 300
+ + LR YG
Sbjct: 873 DYIHANREVLRGYNYG 888
>gi|300123698|emb|CBK24970.2| unnamed protein product [Blastocystis hominis]
Length = 389
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 108/253 (42%), Gaps = 45/253 (17%)
Query: 31 FELMSGQYGRFVFGKFIESCNES-QLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVV 89
+E+ + G F F I+ ES +L II+K L SV G+ + + +I
Sbjct: 122 YEISVKKTGNFAFQNIIDYMKESAKLGQIIVKA-------LQHSVVNSGTGATEDVIL-- 172
Query: 90 AQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACH 149
PL+ H + G+ VI + ++ IY LE C +A
Sbjct: 173 ----PLIEH---------------ERGTHVIQRIIKTFDISLWTPIYSILLEKCYDVARD 213
Query: 150 EQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF------- 202
G + L + R++ + +I +A LS GNYVVQH+L L D +
Sbjct: 214 RNGSMVLRLCYGQVDIDRKEDLARVIIQHAKDLSADPVGNYVVQHILMLPDAYSEEKLAR 273
Query: 203 ---LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV----HYIVEELLNSDQILQVA 255
+I I L GHY++LS K S VV+K + N+V + I ELL + Q+
Sbjct: 274 YYSIIRGILSKLAGHYLELSKQKYSSNVVEKSIT--NSVMLGDNTIFRELLTVSAVQQLL 331
Query: 256 SDKYGNYVIQTAL 268
+ YG +V+Q L
Sbjct: 332 DNHYGMFVLQKLL 344
>gi|154331005|ref|XP_001561942.1| putative pumillio protein 5 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059264|emb|CAM36963.1| putative pumillio protein 5 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 481
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 129 NHKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+HK+D I + C L+ +QGCI + I+ K ++++ ++ + ++L+++
Sbjct: 278 HHKSDALMPIVEVVTSDCQLLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPLLSTLAKN 337
Query: 186 RSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIV 242
+ GNYVVQ +L N+E ++ + + +GH+V+LS K S V++K + IV
Sbjct: 338 QFGNYVVQCILKNIEGYVSLNDLVGSFQGHWVELSCDKYSSNVMEKIVGMLKGTLRQRIV 397
Query: 243 EELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
EL+ LQ + + +GNYV+Q + + Q + VT L L YG
Sbjct: 398 NELIFDVTHLQCLMQNSFGNYVLQAMIGSAVNQYEYGLIYDAVTPL------LHTSPYGH 451
Query: 302 NKEIQKK 308
E + K
Sbjct: 452 RIEAKLK 458
>gi|260942643|ref|XP_002615620.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
gi|238850910|gb|EEQ40374.1| hypothetical protein CLUG_04502 [Clavispora lusitaniae ATCC 42720]
Length = 780
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 147/323 (45%), Gaps = 38/323 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII- 59
+ GS+++Q+KL S + + +F + +++LM+ +G +V KF E ++SQ +++
Sbjct: 450 QHGSRFIQQKLPSATAEEKEMVFSEIQDISYDLMTDVFGNYVIQKFFEFGSDSQRQILLG 509
Query: 60 -LKITFQD---QLFLLASVDK-FGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTK 114
+K + Q++ V + + ++ I++V + L HV+S K +
Sbjct: 510 YMKGNIHELSLQMYGCRVVQRALEAIPLEDQIEIVEE---LKDHVLSCAK--------DQ 558
Query: 115 PGSSVILKCLE--PSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI K +E P N + FI + H +L+ H GC + ++ ++ IL
Sbjct: 559 NGNHVIQKSIEKIPFENVR--FILDSLDSHIYHLSTHPYGCRVIQRLLEYSDIEDQQHIL 616
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
++ L + + GNYV+QH+L P + I V+ S K S V++K +
Sbjct: 617 AELNRFLFYLIQDQYGNYVIQHILERGTPSEKEEIFEVAFSSIVNFSKHKFASNVIEKCI 676
Query: 233 KYQN-------------AVHYIVEELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLS 278
K+ + +E + D L + D+Y NYVIQ LVE +
Sbjct: 677 KHGTLEQRKRIWREVMLGNEDLEKETVADDSPLALMMKDQYANYVIQ-KLVECFHA-KSK 734
Query: 279 VHQRLVTKLQQHLAALRVMK-YG 300
+ LV KL+Q+L L + YG
Sbjct: 735 EKKDLVVKLRQYLKQLSMKNSYG 757
>gi|344302253|gb|EGW32558.1| hypothetical protein SPAPADRAFT_67158 [Spathaspora passalidarum
NRRL Y-27907]
Length = 926
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 151/305 (49%), Gaps = 33/305 (10%)
Query: 22 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 81
+F + + ++L+ +G ++ K I CNE+ L L+ L+I Q+ LF + S+ + G+ +
Sbjct: 257 IFKQIYPYMYDLIIDPFGNYLIQKLIIYCNEANLNLL-LEI-LQENLFQI-SISQHGTRA 313
Query: 82 VKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALE 141
++K+I + S L ++ LK L+ G+ VI K L FIY + ++
Sbjct: 314 LQKIIDNLNNSYQLEL-LIKGLKPYIIDLIKDLNGNHVIQKILNKYQPQDCQFIYDSIID 372
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI--SVNAASLSRHRSGNYVVQHVLNLE 199
+A H+ GC L ++++ ++ +Q I N L + GNYV+Q+++++
Sbjct: 373 DLYIVATHKHGCCVLQKCLNHVTPAQLQQFSAAILRFDNFKLLINDQFGNYVLQYLISIN 432
Query: 200 DPFLIDAICFA--LRGHYVDLSLTKCGSFVVQKFLK-----------YQNAVHYIVEELL 246
F ++ F ++ + +L K S VV+KFLK + N ++ +L
Sbjct: 433 S-FEMNYKIFENFVQFNIGNLCNLKFSSNVVEKFLKNCFNNETMDMSFSNLKFELIYNIL 491
Query: 247 NSDQILQVASDKYGNYVIQTAL-------VETMRQDRLSV-----HQRLVTKLQQHLAAL 294
+D + ++ +D YGNYVIQT + V+ + ++LS+ Q+ +L+Q+ +
Sbjct: 492 IND-LNKLINDPYGNYVIQTLIDILINPHVDNNQVEKLSLVLPDKQQQQSHELEQNSLQI 550
Query: 295 RVMKY 299
++KY
Sbjct: 551 MIIKY 555
>gi|255728835|ref|XP_002549343.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240133659|gb|EER33215.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 970
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 38/292 (13%)
Query: 19 LDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFG 78
D +F + +EL+ +G ++ K I CNES L L++ Q LF + S+++ G
Sbjct: 334 FDIIFNQTYQYMYELIIDPFGNYLIQKLIAYCNESNLDLLME--ILQYNLFQI-SINQHG 390
Query: 79 SSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQA 138
+ +++K+I + S L ++ LK L+ G+ VI K L FIY +
Sbjct: 391 TRALQKIIDNLNNSHQLGL-LIKGLKPYIIELIKDLNGNHVIQKILNKYQPPDCQFIYDS 449
Query: 139 ALEHCLYLACHEQGCINLNNFIDNMK----GSRRKQILHLISVNAASLSRHRSGNYVVQH 194
++ +A H+ GC L ++++ G + IL N L + GNYV+Q+
Sbjct: 450 IIDDLYIVATHKHGCCVLQKCLNHVTLQQLGEFSRAILKF--ENFKLLINDQFGNYVLQY 507
Query: 195 VLNLEDPFLIDAICFALRGHYVDLSLT-----KCGSFVVQKFLK--YQNAVH-------- 239
++++ +D I F + +++ ++ K S VV+KFLK Y N
Sbjct: 508 LISINS---LD-INFKIFQNFITFGISNLCNLKFSSNVVEKFLKNCYTNETVNSSFANLK 563
Query: 240 ----YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
YI+ L+N +L +D YGNYVIQT +++ + +++ + KL
Sbjct: 564 FELIYII--LINDLNVL--INDPYGNYVIQT-MIDIIVNPQVNYQNANIDKL 610
>gi|389629662|ref|XP_003712484.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
gi|351644816|gb|EHA52677.1| hypothetical protein MGG_04985 [Magnaporthe oryzae 70-15]
Length = 888
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 139/309 (44%), Gaps = 20/309 (6%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S D++F + +LM +G +V KF E N+ Q +
Sbjct: 504 QHGSRFIQSKLETANSDEKDQIFKELEPNAVQLMKDVFGNYVIQKFFEHGNQVQKKALAS 563
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + + S + + V+K ++ +V Q L+ + + R+ K G+
Sbjct: 564 QMKGK---MVSLSTEMYACRVVQKALEHVLVEQQAELVKELEVEIVRIIKDAN----GNH 616
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E F+ + + L+ H GC + +++ + + I+H + +
Sbjct: 617 VVQKIIELVPRQYISFVMDSIRGQVIQLSQHNYGCRVIQRMMEHGSDADKATIMHELHQH 676
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL-----K 233
A L+ GNYV+QH++ P + + G V LS K S VV++ + +
Sbjct: 677 APMLTTDPYGNYVIQHIITHGKPEDRQKVISIVLGQIVLLSKHKLASNVVERCIVSGTAE 736
Query: 234 YQNAVHYIVEEL-LNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHL 291
+ A+ I+ ++ LQ + D+Y NYV+Q L + +R Q V +++
Sbjct: 737 DRTAIRKIITTPGIDGTSPLQLMMKDQYANYVVQKLLEKLNGAER----QAFVEEMKPQF 792
Query: 292 AALRVMKYG 300
+L+ + G
Sbjct: 793 NSLKKVSNG 801
>gi|449438629|ref|XP_004137090.1| PREDICTED: pumilio homolog 12-like [Cucumis sativus]
Length = 192
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 141 EHCLYLA------CHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 194
++CL LA C Q CI +N +N++ + I LI + LS+H GNYV+Q
Sbjct: 10 QNCLELARGQASCCILQECIEYSN--NNLRQLQEVLISPLIQ-DVYDLSKHPYGNYVIQF 66
Query: 195 VLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV-HYIVEELLNS---DQ 250
++ L+ + I L +V+LS+ K GS VV+K L + + I+ E+L D+
Sbjct: 67 MIQLDGTNIGRRIIKELTHKFVELSMDKYGSNVVEKCLSCCEGISNDIIFEILEGNGRDR 126
Query: 251 ILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
++Q+ +++YGN+V+QT M + + + L ++ H L+ YG N
Sbjct: 127 LIQICTNQYGNFVVQT----VMSIAKGKIRKLLEKAIKSHWLVLQQHLYGRN 174
>gi|378756380|gb|EHY66404.1| hypothetical protein NERG_00044 [Nematocida sp. 1 ERTm2]
Length = 461
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 20/276 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+EGS+++Q+KL + + F + + +L++ +G +V KF+E Q I
Sbjct: 155 QEGSRFIQKKLDGASAEEIAMTFEEICPWIGDLIADLFGNYVVQKFLEIGTHEQREKI-- 212
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+ + + ++ +G ++K + + + ++ +K L+ + G+ V+
Sbjct: 213 -FSAMEGTIIPLALHMYGCRVIQKAL----ECKDINRKIVERIKGHVIDLVCDQNGNHVV 267
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E +DF+ + E + L+ H GC + +N ++ + I NA
Sbjct: 268 QKCVECV---DSDFVIKEFEEDAVSLSRHRYGCRVIQRIFEN--STKCASAIDKIISNAK 322
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQK--FLKYQNAV 238
L + GNYV+QH+L I L + + S K S V++K
Sbjct: 323 LLVEDQYGNYVIQHILEKGTHAHKRKIITDLSDNIAEYSTHKFASNVMEKCVICGTMEDR 382
Query: 239 HYIVEELLNS------DQILQVASDKYGNYVIQTAL 268
+++++L ++ D ++ + DK+GNYVIQ L
Sbjct: 383 KHMLKQLKSAVGPSGEDMLIHITMDKFGNYVIQRLL 418
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 188 GNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLN 247
GNYVVQ L + + I A+ G + L+L G V+QK L+ ++ IVE +
Sbjct: 193 GNYVVQKFLEIGTHEQREKIFSAMEGTIIPLALHMYGCRVIQKALECKDINRKIVERI-- 250
Query: 248 SDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
++ + D+ GN+V+Q VE + D ++ + ++ +L +YG
Sbjct: 251 KGHVIDLVCDQNGNHVVQKC-VECVDSD------FVIKEFEEDAVSLSRHRYG 296
>gi|427794829|gb|JAA62866.1| Putative translational repressor pumilio/puf3, partial
[Rhipicephalus pulchellus]
Length = 332
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 130/310 (41%), Gaps = 38/310 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + G + LM+ +G +V KF E + Q + L
Sbjct: 22 QHGSRFIQQKLERATLAEKQLVFSEILGAAYNLMTDVFGNYVIQKFFEFGSAEQKQALAL 81
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ L ++ +G ++K ++ + SP V+ L + + G+ V+
Sbjct: 82 KVKGH---VLPLALQMYGCRVIQKALESI--SPDQQKEVVKELDGHVLKCVKDQNGNHVV 136
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
KC+E FI A L+ H GC + +++ G + +L +
Sbjct: 137 QKCIECVDPSALQFIINAFQGQVFCLSTHPYGCRVIQRILEHCTGEQTGPVLEEL----- 191
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAV 238
H+ +VQ D A+RG + LS K S VV+K + + ++
Sbjct: 192 ----HQHTEQLVQ-----------DQYGXAVRGRVLPLSQHKFASNVVEKCVTHASRSER 236
Query: 239 HYIVEELL-----NSDQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQHLA 292
++EE+ + + D+Y NYV+Q + V Q +L +H K++ H+
Sbjct: 237 ALLIEEVCAYVDGPHSALYTMMKDQYANYVVQKMIEVAEPPQRKLLLH-----KIRPHVP 291
Query: 293 ALRVMKYGSN 302
+LR YG +
Sbjct: 292 SLRKYTYGKH 301
>gi|408398948|gb|EKJ78073.1| hypothetical protein FPSE_01534 [Fusarium pseudograminearum CS3096]
Length = 739
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 125/295 (42%), Gaps = 21/295 (7%)
Query: 4 SQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKIT 63
S+++Q KL S K+F + LM YG +V K IE+ + +Q +I +
Sbjct: 357 SRFIQNKLQQAKSEDKQKMFDEIGSDMINLMKDLYGNYVCQKLIENGSMAQKRHVIQAVK 416
Query: 64 FQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRL-----FKFLMMTKPGSS 118
+ S++ +G +K++ PP H++ L + K L + G+
Sbjct: 417 GH---IVQLSLNVYGCRVFQKIVDCC---PP--SHIVGILDEIHSYDVIKSLSQDECGNH 468
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K ++ FI A EH L+ + C L ++ + RKQ++ + +
Sbjct: 469 VIQKLVQTMPPRDVKFITVACQEHARELSANSFSCRILQRVLEYAEEDDRKQLVESLILM 528
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV 238
L + GNYV H++ P D + +L K GS VV+K +K+
Sbjct: 529 MDKLVTDQWGNYVAGHIIEHRGPEDRDRFFEHVMSRLFELCHHKLGSHVVEKCIKFGTPE 588
Query: 239 HY------IVEELLNSDQILQVASDKYGNYVIQTAL--VETMRQDRLSVHQRLVT 285
+ + D++ D++GNYV+ + L +E Q+R+ + + ++T
Sbjct: 589 QRTQIRKQLSPDDDTEDRLENTLKDQFGNYVVASLLKHLEWGSQERIQLKRAILT 643
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V K +E + + QA H + L+ + GC +D S IL I
Sbjct: 392 GNYVCQKLIENGSMAQKRHVIQAVKGHIVQLSLNVYGCRVFQKIVDCCPPSHIVGILDEI 451
Query: 176 SVNAA--SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK 233
SLS+ GN+V+Q ++ P + I A + H +LS ++Q+ L+
Sbjct: 452 HSYDVIKSLSQDECGNHVIQKLVQTMPPRDVKFITVACQEHARELSANSFSCRILQRVLE 511
Query: 234 Y--QNAVHYIVEEL-LNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKL 287
Y ++ +VE L L D+++ +D++GNYV + +DR + ++++L
Sbjct: 512 YAEEDDRKQLVESLILMMDKLV---TDQWGNYVAGHIIEHRGPEDRDRFFEHVMSRL 565
>gi|157864120|ref|XP_001680774.1| putative pumillio protein 5 [Leishmania major strain Friedlin]
gi|68124066|emb|CAJ02048.1| putative pumillio protein 5 [Leishmania major strain Friedlin]
Length = 470
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 129 NHKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+HK+D I + C L+ +QGCI + I+ K ++++ ++ + ++L+++
Sbjct: 267 HHKSDALMPIVEVVTSDCQRLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPLLSTLAKN 326
Query: 186 RSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAV-HYIV 242
+ GNYVVQ +L N+E ++ + + +GH+V+LS K S V++K + Q ++ IV
Sbjct: 327 QFGNYVVQCILKNMEGYVSLNDLVGSFQGHWVELSCDKYSSNVMEKIVGMLQGSLRQRIV 386
Query: 243 EELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
EL+ LQ + + +GNYV+Q + + Q + VT L L YG
Sbjct: 387 NELIFDVAHLQCLMQNSFGNYVLQAVIGSAVNQYEYGLIYDAVTPL------LHTSPYGH 440
Query: 302 NKEIQKK 308
E + K
Sbjct: 441 RIEAKLK 447
>gi|344234445|gb|EGV66315.1| ARM repeat-containing protein [Candida tenuis ATCC 10573]
Length = 746
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 133/273 (48%), Gaps = 38/273 (13%)
Query: 31 FELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVA 90
+EL+ +G ++ K I+ + L L++ Q LF + S+++ G+ +++K+I+ +
Sbjct: 183 YELIIDPFGNYLIQKLIKYASNENLNLML--DILQSNLFQI-SINQHGTRALQKIIESL- 238
Query: 91 QSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHE 150
SP L + S LK L+ G+ VI K L + FIY + L + +A H+
Sbjct: 239 NSPYQLDLLTSGLKPFIIELIKDLNGNHVIQKILNKFKPLQCQFIYDSILNDLITVATHK 298
Query: 151 QGCINLNNFIDNMKGSRRKQILHLI--SVNAASLSRHRSGNYVVQHVLNLED-----PFL 203
GC L ++++ + Q ++ I N L + GNYV+Q+++++ D F
Sbjct: 299 HGCCVLQKCLNHVTYKQLNQFVNEILNDFNLNKLINDQFGNYVLQYLISINDYQIHYKFY 358
Query: 204 IDAICFALRGHYVDLSLTKCGSFVVQKFLK------YQNA-------------VHYIVEE 244
+ + F + HY +L K S V++KF+K ++N VH+I++
Sbjct: 359 SNLVRFDMI-HYCNL---KFSSNVIEKFIKNCANNEFKNNEVNIDFVNLKFEMVHHILKT 414
Query: 245 LLNSDQILQVASDKYGNYVIQTALVETMRQDRL 277
S + ++ +D +GNYVIQT L++ + +
Sbjct: 415 ---SASLNKLINDPFGNYVIQT-LIDNLTNPNI 443
>gi|294953151|ref|XP_002787620.1| pumilio, putative [Perkinsus marinus ATCC 50983]
gi|239902644|gb|EER19416.1| pumilio, putative [Perkinsus marinus ATCC 50983]
Length = 645
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 130/311 (41%), Gaps = 29/311 (9%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALI---- 58
GS++LQ L + +F V +L + +G +V K + E + ++
Sbjct: 307 GSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPEEHIVILSEQL 366
Query: 59 ---ILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKP 115
IL+++F +G V+K+++ V +L +++ LK + +
Sbjct: 367 LGDILRLSFH----------MYGCRVVQKVLENVNAEQQVL--IVNELKGHVVDCVEDQN 414
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ VI KC+E FI + ++ H GC + I+ + + ++ +
Sbjct: 415 GNHVIQKCIETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMSEPLMQEV 474
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--- 232
N LS+ + GNYVVQHV+ +A+ A+ + K S VV+K L
Sbjct: 475 VENLWMLSQDQYGNYVVQHVVEHGPNNFKNAVVKAVAANIEQYGCHKFASNVVEKALLSG 534
Query: 233 --KYQNAVHYIVEELLNSDQILQVAS-DKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQ 289
+ Q+ + V D L + DK+ NYV+Q L + +R + LV LQ
Sbjct: 535 SRQNQDEIIGAVIGSAGPDAPLHSMTVDKFANYVVQRCLELSQGTNR----EHLVNMLQL 590
Query: 290 HLAALRVMKYG 300
L LR + YG
Sbjct: 591 DLPNLRKVTYG 601
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 24/172 (13%)
Query: 143 CLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPF 202
+ LA + G L N ++ S R + + +A L+ GNYV+Q + +
Sbjct: 298 AVELAMDQYGSRFLQNALETATPSERHDVFLAVLSSAQQLTTDPFGNYVIQKLFDHLPEE 357
Query: 203 LIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY--IVEELLNSDQILQVASDKYG 260
I + L G + LS G VVQK L+ NA IV EL ++ D+ G
Sbjct: 358 HIVILSEQLLGDILRLSFHMYGCRVVQKVLENVNAEQQVLIVNEL--KGHVVDCVEDQNG 415
Query: 261 NYVIQTA-----------LVETMRQD--RLSVH-------QRLVTKLQQHLA 292
N+VIQ +V+ R + R+S+H QRL+ +L + ++
Sbjct: 416 NHVIQKCIETLPTQTLGFIVDEFRGNVTRMSLHCYGCRVVQRLIERLPEEMS 467
>gi|453087066|gb|EMF15107.1| ARM repeat-containing protein [Mycosphaerella populorum SO2202]
Length = 962
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 68/289 (23%), Positives = 125/289 (43%), Gaps = 36/289 (12%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +S + +F + LM+ +G +V KF E +++ ++
Sbjct: 549 QHGSRFIQTKLETANSDEKEHVFREIEPNAIPLMTDVFGNYVIQKFFEHGDQTHKKILAN 608
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLY----HVMSALKRLFKFLMMTK 114
K+ Q L S+ +G V+K + +V Q L+ HV+ +K +
Sbjct: 609 KMRGQ---VLALSLQTYGCRVVQKALDHVLVDQQRELITELENHVLKCVK--------DQ 657
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI K +E FI A L+ H GC + ++ + I+
Sbjct: 658 NGNHVIQKVIERCQATTIGFIVTALQGQVQQLSIHPYGCRVIQRCLEKSDLPSKSMIMAE 717
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLED-----PFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+ S+ GNYVVQHV+ + +++ + L G+ S K S VV+
Sbjct: 718 LMQGIPSMIADHFGNYVVQHVVEHDGGGEGRQQVLNIVASGLEGY----SKHKYASNVVE 773
Query: 230 KFLKYQNAV--HYIVEELLNSDQ--------ILQVASDKYGNYVIQTAL 268
L + + + ++ +LL ++ ++ + D+YGNYVIQ L
Sbjct: 774 ACLVHADDLWRQRVMYQLLEANARRTEGEGVLVGMIRDQYGNYVIQKFL 822
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 15/201 (7%)
Query: 109 FLMMTKPGSSVILKCLEPS--YNHKND-----FIYQAALEHCLYLACHEQGCINLNNFID 161
F M P S I C++ + Y K++ + + EH + + G + ++
Sbjct: 501 FDMPATPRDSPITDCVQSALMYEFKSNTKTKRYELRDIYEHIAEFSGDQHGSRFIQTKLE 560
Query: 162 NMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLT 221
++ + I NA L GNYV+Q D + +RG + LSL
Sbjct: 561 TANSDEKEHVFREIEPNAIPLMTDVFGNYVIQKFFEHGDQTHKKILANKMRGQVLALSLQ 620
Query: 222 KCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSV 279
G VVQK L + + ++ EL N +L+ D+ GN+VIQ ++E + +
Sbjct: 621 TYGCRVVQKALDHVLVDQQRELITELEN--HVLKCVKDQNGNHVIQK-VIERCQATTIGF 677
Query: 280 HQRLVTKLQQHLAALRVMKYG 300
+VT LQ + L + YG
Sbjct: 678 ---IVTALQGQVQQLSIHPYG 695
>gi|406607197|emb|CCH41458.1| hypothetical protein BN7_999 [Wickerhamomyces ciferrii]
Length = 893
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 131/279 (46%), Gaps = 23/279 (8%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q++L + +F + + ELM+ +G +V K+ E +++Q +++ ++
Sbjct: 568 GSRFIQQQLEISSDEENEVIFNEIREASLELMTDVFGNYVIQKYFEHGSDTQRQVLLEQM 627
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPL--LYHVMSALKRLFKFLMMTKPGSSVI 120
Q Q S+ +G V+K I+ V PL +++ LK + + G+ VI
Sbjct: 628 KNQVQHL---SMQMYGCRVVQKAIEYV----PLNDQISIITELKDSIVSCIKDQNGNHVI 680
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E K +FI + +L+ H GC + ++ K ++ IL+ ++
Sbjct: 681 QKSIEKIPIEKIEFILDSLKTQIYHLSTHTYGCRVIQRLLEFSKPKDQEYILNELNKFTY 740
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHY 240
L + + GNYV+QH++ P I + G VD S K S VV+K + + +
Sbjct: 741 FLIQDQFGNYVIQHIIEHGKPSERKLIVDTVLGSVVDFSKHKFASNVVEKCVIFGDDEQR 800
Query: 241 --IVEELL-----NSDQILQVAS-------DKYGNYVIQ 265
I++E+L + D+ + S D++ NYV+Q
Sbjct: 801 SLILDEVLKNNEKDDDKPVDDRSPLGLMMKDQFANYVVQ 839
>gi|310789326|gb|EFQ24859.1| hypothetical protein GLRG_00003 [Glomerella graminicola M1.001]
Length = 821
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 145/331 (43%), Gaps = 36/331 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 444 QHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLAS 503
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + + S+ + V+K ++ +V Q L+ + + ++ K + G+
Sbjct: 504 QMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVKELEPEILKVVK----DQNGNH 556
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DF+ + LA H C + ++ ++ IL + +
Sbjct: 557 VVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQDKETILAELHNS 616
Query: 179 AASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
L + GNYVVQH++ ED I + A V +S K S VV+K ++Y
Sbjct: 617 TQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIA---QLVTMSKHKFASNVVEKCIQYG 673
Query: 236 NAVHY------IVEELLNSDQILQ-VASDKYGNYVIQ-----------TALVETMRQDRL 277
+A I+ + + LQ + D+YGNYVIQ A VE MR
Sbjct: 674 SAEERKGIREQIISQSADGTSSLQLMMKDQYGNYVIQKLLNQLDGPEREAFVEEMRPQFN 733
Query: 278 SVHQRLVTKLQQHLAALRVMKYGSNKEIQKK 308
++ + T + LAA+ + Y + + K
Sbjct: 734 TLRK---TSTSRQLAAIDRLIYATQTQPPAK 761
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 17/175 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + Q+ I NA L + GNYV+Q +
Sbjct: 436 HVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQ 495
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE---ELLN--SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE EL+ +IL+V
Sbjct: 496 VQKKVLASQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVKELEPEILKVVK 550
Query: 257 DKYGNYVIQTALVETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNKE 304
D+ GN+V+Q + RQ D + + V++L H+ A RV ++YG++++
Sbjct: 551 DQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTDQD 605
>gi|301122711|ref|XP_002909082.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
gi|262099844|gb|EEY57896.1| pumilio-like mating protein M90 [Phytophthora infestans T30-4]
Length = 926
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 136/304 (44%), Gaps = 36/304 (11%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL D R+ F + + LM+ +G +V KF+E + Q L++
Sbjct: 595 QTGSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLEQQQLLVE 654
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGS 117
+T + LA + +G +++ ++V + ++ +++L +M + G+
Sbjct: 655 LMT--SNMISLA-LQVYGCRVIQRALEVTQ-----VEEQLALIRQLKGHVMKCVTDQNGN 706
Query: 118 SVILKCLEP-SYNHKND----------------FIYQAALEHCLYLACHEQGCINLNNFI 160
V+ KC+E S+ + FI + + L+ H GC + +
Sbjct: 707 HVLQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGCRVIQRVL 766
Query: 161 DNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSL 220
++ ++ + +L I L + + GNYVVQHV++ +P + + A+ S
Sbjct: 767 EHCAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLPEIARWSQ 826
Query: 221 TKCGSFVVQKFLKY--QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETM 272
K S VV+ L++ + + IV+ +L D+ +L + YGNYV+Q L
Sbjct: 827 HKYASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGNYVVQKLLERAD 886
Query: 273 RQDR 276
DR
Sbjct: 887 DHDR 890
>gi|301609979|ref|XP_002934529.1| PREDICTED: pumilio homolog 2-like [Xenopus (Silurana) tropicalis]
Length = 1175
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 136/315 (43%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL +F + ++LM+ +G +V KF E + Q +
Sbjct: 849 QHGSRFIQQKLERASPAERQLVFSEILQAAYQLMTDVFGNYVIQKFFEFGSMDQKLALAT 908
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA---QSP---PLLYHVMSALKRLFKFLMMTK 114
+I + + LA + +G ++K ++ ++ QS L HV+ +K +
Sbjct: 909 RI--RGHVLPLA-LQMYGCRVIQKALESISIDQQSEMVRELDGHVLKCVK--------DQ 957
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ V+ KC+E FI A L+ H GC + +++ + IL
Sbjct: 958 NGNHVVQKCIECVQPQSLQFIIDAFKGQVYVLSTHPYGCRVIQRILEHCTPEQTLPILEE 1017
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + L + + GNYV+QHVL I +RG + LS K S VV+K + +
Sbjct: 1018 LHQSTEQLVQDQYGNYVIQHVLEHGRSDDKSKIVSEVRGKVLALSQHKFASNVVEKCVTH 1077
Query: 235 QNAVHY--IVEELLNSDQILQVA-----SDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ +++E+ + A D+Y NYV+Q + D QR ++
Sbjct: 1078 SSRTERALLIDEICCQNDGPHCALYTMMKDQYANYVVQKMI------DMAEPAQRKIIMH 1131
Query: 286 KLQQHLAALRVMKYG 300
K++ H+ LR YG
Sbjct: 1132 KIRPHITTLRKYTYG 1146
>gi|23505401|gb|AAN37689.1| pumilio-like mating protein M90 [Phytophthora infestans]
Length = 875
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 135/302 (44%), Gaps = 36/302 (11%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
GS+++Q+KL D R+ F + + LM+ +G +V KF+E + Q L++ +
Sbjct: 546 GSRFIQQKLEKADERVKADAFNEIFPNSLLLMTDVFGNYVIQKFLEYGSLEQQQLLVELM 605
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLM---MTKPGSSV 119
T + LA + +G +++ ++V + ++ +++L +M + G+ V
Sbjct: 606 T--SNMISLA-LQVYGCRVIQRALEVTQ-----VEEQLALIRQLKGHVMKCVTDQNGNHV 657
Query: 120 ILKCLEP-SYNHKND----------------FIYQAALEHCLYLACHEQGCINLNNFIDN 162
+ KC+E S+ + FI + + L+ H GC + +++
Sbjct: 658 LQKCIEAASWKRAAECKGLRPQRFVTGEDIQFIIDSFVGQAASLSTHSYGCRVIQRVLEH 717
Query: 163 MKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTK 222
++ + +L I L + + GNYVVQHV++ +P + + A+ S K
Sbjct: 718 CAPNQIRPLLDEIIYKCRDLVKDQFGNYVVQHVISHGEPDQRNIVMQAVLPEIARWSQHK 777
Query: 223 CGSFVVQKFLKY--QNAVHYIVEELLNSDQ------ILQVASDKYGNYVIQTALVETMRQ 274
S VV+ L++ + + IV+ +L D+ +L + YGNYV+Q L
Sbjct: 778 YASNVVESCLEHATKEEISQIVDFILQCDESGASCALLPMMKHMYGNYVVQKLLERADDH 837
Query: 275 DR 276
DR
Sbjct: 838 DR 839
>gi|401415042|ref|XP_003872017.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488239|emb|CBZ23484.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 470
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 13/187 (6%)
Query: 129 NHKNDF---IYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRH 185
+HK+D I + C L+ +QGCI + I+ K ++++ ++ + ++L+++
Sbjct: 267 HHKSDALMPIVEVVTSDCQRLSVTQQGCIAIIRIIEYAKPAQKRTLISALVPLLSTLAKN 326
Query: 186 RSGNYVVQHVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY-QNAV-HYIV 242
+ GNYVVQ +L N+E ++ + + +GH+V+LS K S V++K + Q ++ IV
Sbjct: 327 QFGNYVVQCILKNMEGYVSLNDLVGSFQGHWVELSCDKYSSNVMEKIVGMLQGSLRQRIV 386
Query: 243 EELLNSDQILQ-VASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYGS 301
EL+ LQ + + +GNYV+Q + + Q + VT L L YG
Sbjct: 387 NELIFDVAHLQCLMQNSFGNYVLQAVIGSAVNQYEYGLIYDAVTPL------LHTSPYGH 440
Query: 302 NKEIQKK 308
E + K
Sbjct: 441 RIEAKLK 447
>gi|380488307|emb|CCF37468.1| hypothetical protein CH063_08789 [Colletotrichum higginsianum]
Length = 821
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 142/330 (43%), Gaps = 36/330 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + +S D++F + +LM +G +V KF E N+ Q ++
Sbjct: 444 QHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQVQKKVLAS 503
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSS 118
++ + + S+ + V+K ++ +V Q L+ + + ++ K + G+
Sbjct: 504 QMKGK---VVDLSMQMYACRVVQKALEHVLVEQQAELVKELEPEILKVVK----DQNGNH 556
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
V+ K +E DF+ + LA H C + ++ ++ IL + +
Sbjct: 557 VVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQDKETILAELHSS 616
Query: 179 AASLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
L + GNYVVQH++ ED I + A V LS K S VV+K ++Y
Sbjct: 617 TQVLITDQYGNYVVQHIIEHGKSEDRSRIIQLVIA---QLVTLSKHKFASNVVEKCIQYG 673
Query: 236 NAVHY------IVEELLNSDQILQ-VASDKYGNYVIQ-----------TALVETMRQDRL 277
A I+ + LQ + D+YGNYVIQ A VE MR
Sbjct: 674 TAEERKGIREQIISHAADGTSSLQLMMKDQYGNYVIQKLLNQLEGAEREAFVEEMRPQFN 733
Query: 278 SVHQRLVTKLQQHLAALRVMKYGSNKEIQK 307
++ + T + LAA+ + Y + K
Sbjct: 734 TLRK---TSTSRQLAAIDRLIYATQTPPSK 760
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDP 201
H + + + G + ++ + Q+ I NA L + GNYV+Q +
Sbjct: 436 HVVEFSGDQHGSRFIQQKLETANSDEKDQVFREIEPNAIQLMKDVFGNYVIQKFFEHGNQ 495
Query: 202 FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAVHYIVE---ELLN--SDQILQVAS 256
+ ++G VDLS+ VVQK L+ H +VE EL+ +IL+V
Sbjct: 496 VQKKVLASQMKGKVVDLSMQMYACRVVQKALE-----HVLVEQQAELVKELEPEILKVVK 550
Query: 257 DKYGNYVIQTALVETMRQ--D-RLSVHQRLVTKLQQHLAALRV----MKYGSNKE 304
D+ GN+V+Q + RQ D + + V++L H+ A RV ++YG+ ++
Sbjct: 551 DQNGNHVVQKIIELVPRQYIDFVMDSFRGQVSQLAAHMYACRVIQRMLEYGTEQD 605
>gi|440298987|gb|ELP91602.1| pumilio domain containing protein C6G9.14, putative [Entamoeba
invadens IP1]
Length = 486
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 136/305 (44%), Gaps = 31/305 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ L + ++++F +S +ELM +G +V K E +
Sbjct: 177 QQGSRRIQQFLDTASKAEVEEIFNFISNDIYELMLDLFGNYVIQKLFE------FGTKEI 230
Query: 61 KITFQDQL---FLLASVDKFGSSSVKKLIKVV-AQSPPLLYHVMSALKRLFKFLMMTKPG 116
+ F D + ++ S +G ++K ++ + A+ +L +K + + G
Sbjct: 231 RDVFMDVVKSRVVMLSTHTYGCRVIQKAVEFIDAKQMGIL---ADEIKGHIVAFVEDQNG 287
Query: 117 SSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL-- 174
+ VI + +E + + I + H + H GC + ++ RR+ ++H
Sbjct: 288 NHVIQRFIEFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQKLVE-----RREDVIHRTL 342
Query: 175 ---ISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ N L+ ++ GNYV+QH+L + + ++G + + S K S VV+K
Sbjct: 343 NKELENNIWDLAMNQYGNYVIQHLLEKGTRVQQNMVINEMKGKFCEFSTKKYSSNVVEKC 402
Query: 232 LKYQNAVHY--IVEELL---NSDQILQVASDKYGNYVIQTALVETM--RQDRLSVHQRLV 284
+ V E+ +++ +L++ D Y NYVIQT LVE M Q + + +R+
Sbjct: 403 MHCCTPTQRDGFVNEICGKKDNEMLLKLMKDPYANYVIQT-LVEVMDEEQRKCFIEKRVF 461
Query: 285 TKLQQ 289
+ Q
Sbjct: 462 PNINQ 466
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 8/195 (4%)
Query: 110 LMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRK 169
LM+ G+ VI K E D + L+ H GC + ++ + +
Sbjct: 209 LMLDLFGNYVIQKLFEFGTKEIRDVFMDVVKSRVVMLSTHTYGCRVIQKAVEFIDAKQMG 268
Query: 170 QILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQ 229
+ I + + ++GN+V+Q + I + GH V G VVQ
Sbjct: 269 ILADEIKGHIVAFVEDQNGNHVIQRFIEFMPSIYSSMISEEITGHVVSFGKHAYGCRVVQ 328
Query: 230 KFL-KYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLV-TKL 287
K + + ++ +H + + L ++ I +A ++YGNYVIQ L + R V Q +V ++
Sbjct: 329 KLVERREDVIHRTLNKELENN-IWDLAMNQYGNYVIQHLLEKGTR-----VQQNMVINEM 382
Query: 288 QQHLAALRVMKYGSN 302
+ KY SN
Sbjct: 383 KGKFCEFSTKKYSSN 397
>gi|71654531|ref|XP_815883.1| pumilio/PUF RNA binding protein 5 [Trypanosoma cruzi strain CL
Brener]
gi|70880972|gb|EAN94032.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma cruzi]
Length = 418
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 16 SRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVD 75
S +L++ F VV G GR + + + ++ +II ++ Q + ++D
Sbjct: 107 SNLLEQFFAVV-GNIPRTACTVTGRHLLVSVLRLQHTDKVQIIIDELLPQ---LNIVALD 162
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMS--ALKRLFKFLMMTKPGSSVILKCLEPSYNHKND 133
+ G V+ LI+++ S LL ++ A K + + + ++ V+ E +
Sbjct: 163 QQGCHVVRALIELI--STELLETILPHFAPKTIIELAVSSQHTRRVVQSIFERHKSEALT 220
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
I + LA +QGCI + I+N +R+ ++ ++ SL+ + GNYVVQ
Sbjct: 221 PIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYVVQ 280
Query: 194 HVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEEL-LNSD 249
+L +++ L+ +C GH++ LS K S V++K + + V +V+EL +++
Sbjct: 281 CLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMDAS 340
Query: 250 QILQVASDKYGNYVIQ 265
+ + D +GN+V+Q
Sbjct: 341 NLRCLMQDGFGNFVLQ 356
>gi|339246841|ref|XP_003375054.1| pumilio protein [Trichinella spiralis]
gi|316971694|gb|EFV55440.1| pumilio protein [Trichinella spiralis]
Length = 369
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 24/305 (7%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCN---ESQLALII 59
GS+++Q+KL + + +F + LM+ +G +V KF E +++LA ++
Sbjct: 57 GSRFIQQKLERANMQDRQMVFSEIIESAQMLMTDVFGNYVIQKFFEFGTVEQKNELARVL 116
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVV--AQSPPLLYHVMSALKRLFKFLMMTKPGS 117
L ++ +G ++K ++ V Q ++ + + + K + G+
Sbjct: 117 RPNV------LALALQMYGCRVIQKCLEAVDHEQQREIVKELEGNILKCVK----DQNGN 166
Query: 118 SVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISV 177
VI K +E F+ A + L+ H GC + +++ ++K IL +
Sbjct: 167 HVIQKIIETVDPKSLQFVIDAFKDQVFALSTHSYGCRVIQRILEHCMMEQKKPILEELHQ 226
Query: 178 NAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNA 237
+ SL + GNYV+QHVL I +R + S K S VV+K + + A
Sbjct: 227 HIKSLVCDQYGNYVIQHVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATA 286
Query: 238 VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVM 297
EE ++ + D+Y NYV+Q L R +RL+ ++ H+ LR
Sbjct: 287 -----EERNCLIILVAMMKDQYANYVVQKLLDVADPSQR----KRLMQNIRPHVPQLRRF 337
Query: 298 KYGSN 302
YG +
Sbjct: 338 TYGKH 342
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 99/234 (42%), Gaps = 14/234 (5%)
Query: 3 GSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKI 62
G + +Q+ L + D ++ + G + + Q G V K IE+ + L +I
Sbjct: 129 GCRVIQKCLEAVDHEQQREIVKELEGNILKCVKDQNGNHVIQKIIETVDPKSLQFVI--D 186
Query: 63 TFQDQLFLLASVDKFGSSSVKKLIK--VVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
F+DQ+F L S +G ++++++ ++ Q P+L L + K L+ + G+ VI
Sbjct: 187 AFKDQVFAL-STHSYGCRVIQRILEHCMMEQKKPIL----EELHQHIKSLVCDQYGNYVI 241
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
LE I + E L + H+ + + R ++ L++
Sbjct: 242 QHVLEHGQAEDKSRIIKEMREEILRYSQHKFASNVVEKCVCFATAEERNCLIILVA---- 297
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
+ + + NYVVQ +L++ DP + +R H L G ++ K KY
Sbjct: 298 -MMKDQYANYVVQKLLDVADPSQRKRLMQNIRPHVPQLRRFTYGKHILSKLEKY 350
>gi|407853402|gb|EKG06417.1| pumilio/PUF RNA binding protein 5, putative, partial [Trypanosoma
cruzi]
Length = 445
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 16 SRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVD 75
S +L++ F VV G GR + + + ++ +II ++ Q + ++D
Sbjct: 134 SNLLEQFFAVV-GNIPRTACTVTGRHLLVSVLRLQHTDKVQIIIDELLPQ---LNIVALD 189
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMS--ALKRLFKFLMMTKPGSSVILKCLEPSYNHKND 133
+ G V+ LI+++ S LL ++ A K + + + ++ V+ E +
Sbjct: 190 QQGCHVVRALIELI--STELLETILPHFAPKTIIELAVSSQHTRRVVQSIFERHKSEALT 247
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
I + LA +QGCI + I+N +R+ ++ ++ SL+ + GNYVVQ
Sbjct: 248 PIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYVVQ 307
Query: 194 HVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEEL-LNSD 249
+L +++ L+ +C GH++ LS K S V++K + + V +V+EL +++
Sbjct: 308 CLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMDAS 367
Query: 250 QILQVASDKYGNYVIQ 265
+ + D +GN+V+Q
Sbjct: 368 NLRCLMQDGFGNFVLQ 383
>gi|145480939|ref|XP_001426492.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393567|emb|CAK59094.1| unnamed protein product [Paramecium tetraurelia]
Length = 439
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 126/281 (44%), Gaps = 25/281 (8%)
Query: 38 YGRFVFGKFIESCNESQLALII---LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPP 94
+G +V K +SC + +L + LK F D S + FG ++KLI+
Sbjct: 153 FGNYVVQKIFDSCGDVKLKTRMFNKLKTHFYD-----LSKNPFGCRVMQKLIEYSQGKED 207
Query: 95 LLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCI 154
+ ++S L + + L+ G+ VI K LE K +F+ E Y+A GC
Sbjct: 208 IQNSILSQLVQNMRSLIYDSNGNYVIFKMLESYDKSKMEFLIPIVEESFHYMAQQIYGCK 267
Query: 155 NLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN--LEDPFLIDAICFALR 212
++ I + ++ N + LS+ GNY++QH+L + P I ++
Sbjct: 268 IIHKIIQQYPPNFIANLVKQSIANYSGLSQTEFGNYILQHILQFWIPSPEKTRLIQLVIQ 327
Query: 213 GHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQ-----------ILQVASDKY 259
Y LS+ K S V++ L+ ++ + ++ LL +Q +Q+A+ ++
Sbjct: 328 QFY-QLSINKYASNTVERALETLSKSELITVLNWLLFRNQTQQQFSYVATNFVQLANHQF 386
Query: 260 GNYVIQTALVETMRQDRLSVHQRLVTKLQQHLAALRVMKYG 300
NYVI+ L+ +Q + S+ L+ K QQ AL+ +G
Sbjct: 387 ANYVIKKFLILIDQQMQQSILNYLI-KNQQEYQALKTTLHG 426
>gi|35186944|gb|AAQ84134.1| pumilio protein 5 [Trypanosoma cruzi]
Length = 418
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 16 SRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVD 75
S +L++ F VV G GR + + + ++ +II ++ Q + ++D
Sbjct: 107 SNLLEQFFAVV-GNIPRTACTVTGRHLLVSVLRLQHTEKVQIIIDELLPQ---LNIVALD 162
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMS--ALKRLFKFLMMTKPGSSVILKCLEPSYNHKND 133
+ G V+ LI+++ S LL ++ A K + + + ++ V+ E +
Sbjct: 163 QQGCHVVRALIELI--STELLETILPHFAPKTIIELAVSSQHTRRVVQSIFERHKSEALT 220
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
I + LA +QGCI + I+N +R+ ++ ++ SL+ + GNYVVQ
Sbjct: 221 PIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYVVQ 280
Query: 194 HVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEEL-LNSD 249
+L +++ L+ +C GH++ LS K S V++K + + V +V+EL +++
Sbjct: 281 CLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMDAS 340
Query: 250 QILQVASDKYGNYVIQ 265
+ + D +GN+V+Q
Sbjct: 341 NLRCLMQDGFGNFVLQ 356
>gi|167378573|ref|XP_001734853.1| pumilio [Entamoeba dispar SAW760]
gi|165903440|gb|EDR28975.1| pumilio, putative [Entamoeba dispar SAW760]
Length = 184
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 139 ALEHCLYLAC-HEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLN 197
AL+ + C H GC + I+++ ++L +I ++ L+ + GNYVVQ+VL
Sbjct: 8 ALQGIVLECCKHPYGCRVVQRVIESVDYDCVTELLQVIEPHSLDLTEDQYGNYVVQNVLE 67
Query: 198 LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIVEELLNSDQILQVA 255
P I ++G+ V LS+ K S V++K K+ N I+EE+ ++ ILQ+
Sbjct: 68 RGYPNDRHNILQQIKGNIVRLSMGKYSSNVIEKCFKFATPNERQQILEEIYQNNGILQMM 127
Query: 256 SDKYGNYVIQTAL--VETMRQDRL 277
D++ NYV+Q + ++++ ++++
Sbjct: 128 QDQFANYVVQKIIEAIDSLEREKI 151
>gi|71655238|ref|XP_816225.1| pumilio/PUF RNA binding protein 5 [Trypanosoma cruzi strain CL
Brener]
gi|70881337|gb|EAN94374.1| pumilio/PUF RNA binding protein 5, putative [Trypanosoma cruzi]
Length = 418
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 123/256 (48%), Gaps = 12/256 (4%)
Query: 16 SRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVD 75
S +L++ F VV G GR + + + ++ +II ++ Q + ++D
Sbjct: 107 SNLLEQFFAVV-GNIPRTACTVTGRHLLVSVLRLQHTEKVQIIIDELLPQ---LNIVALD 162
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMS--ALKRLFKFLMMTKPGSSVILKCLEPSYNHKND 133
+ G V+ LI+++ S LL ++ A K + + + ++ V+ E +
Sbjct: 163 QQGCHVVRALIELI--STELLETILPHFAPKTIIELAVSSQHTRRVVQSIFERHKSEALT 220
Query: 134 FIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQ 193
I + LA +QGCI + I+N +R+ ++ ++ SL+ + GNYVVQ
Sbjct: 221 PIVTTIAQSGQQLAVSQQGCIAVIRTIENSLPHQRRSVISMLLPVLPSLTMNCYGNYVVQ 280
Query: 194 HVL-NLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQNAV--HYIVEEL-LNSD 249
+L +++ L+ +C GH++ LS K S V++K + + V +V+EL +++
Sbjct: 281 CLLQHMDHASLVSVVCHNFAGHWLTLSCNKFASNVIEKVVWQLDGVARKEVVDELVMDAS 340
Query: 250 QILQVASDKYGNYVIQ 265
+ + D +GN+V+Q
Sbjct: 341 NLRCLMQDGFGNFVLQ 356
>gi|354547070|emb|CCE43803.1| hypothetical protein CPAR2_500290 [Candida parapsilosis]
Length = 800
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 134/297 (45%), Gaps = 17/297 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q KL + +F + +F+LM+ +G +V K+ E +E Q +++
Sbjct: 492 QHGSRFIQTKLPQSSDEEKEVIFKEICDISFDLMTDVFGNYVMQKYFEYGSEQQKQILLQ 551
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
K+ ++ L S+ +G V++ ++ + + L ++ L+ + + VI
Sbjct: 552 KML--GHIYEL-SLQTYGCRVVQRALESLQEQDQL--KIILELQDKVLVCATDQNSNHVI 606
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K +E K FI H +L + GC + I ++ I + + +
Sbjct: 607 QKSIELIDFDKVRFILDVLTGHFYHLCTDQYGCRVVQRLIHFGNDKDKQMIYNEVESHLG 666
Query: 181 SLSRHRSGNYVVQHVLN---LEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQ 235
L H+ GNYV+Q L E +C + + K S V +K + Q
Sbjct: 667 FLITHKFGNYVIQACLENQLREQDIFTTVVC-----KFTHFATNKYASNVCEKLVDSATQ 721
Query: 236 NAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQHLA 292
+ I+E +++ +++ ++ D+YGNYV+Q + ++ S ++LV KLQQ L+
Sbjct: 722 LQLQKILEVVMHGNELERIMGDEYGNYVVQK--IVSVLDGNSSEKKQLVVKLQQLLS 776
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 80/192 (41%), Gaps = 16/192 (8%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLI 175
G+ V+ K E + + Q L H L+ GC + +++++ + +I+ +
Sbjct: 530 GNYVMQKYFEYGSEQQKQILLQKMLGHIYELSLQTYGCRVVQRALESLQEQDQLKIILEL 589
Query: 176 SVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKYQ 235
+ ++ N+V+Q + L D + I L GH+ L + G VVQ+ + +
Sbjct: 590 QDKVLVCATDQNSNHVIQKSIELIDFDKVRFILDVLTGHFYHLCTDQYGCRVVQRLIHFG 649
Query: 236 NA-----VHYIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVTKLQQH 290
N ++ VE L + + K+GNYVIQ L +R+ Q + T +
Sbjct: 650 NDKDKQMIYNEVESHLGF-----LITHKFGNYVIQACLENQLRE------QDIFTTVVCK 698
Query: 291 LAALRVMKYGSN 302
KY SN
Sbjct: 699 FTHFATNKYASN 710
>gi|67476332|ref|XP_653769.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|56470752|gb|EAL48383.1| pumilio family RNA-binding protein [Entamoeba histolytica
HM-1:IMSS]
gi|449702739|gb|EMD43320.1| pumilio domain containing protein [Entamoeba histolytica KU27]
Length = 435
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 10/206 (4%)
Query: 76 KFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFI 135
+FG +V+K+ + + + S + R +++ P ++ +++ L +N KN
Sbjct: 205 QFGGYTVQKIAPFMRER---HIQIWSPILRNNISILVIDPHANYVIQTLLKIFNEKNSNF 261
Query: 136 YQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQH 194
+ L+ C+ ++ + GC L + IDN + I + N L + + GN+V+QH
Sbjct: 262 FYGGLKDCVVRISKTKIGCSVLTHAIDNSTIQQINLIKPQLLSNCCDLIQDQYGNFVIQH 321
Query: 195 VLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQIL 252
++ DP +I I ++ V S K S VV+K LK +N +++ L + +
Sbjct: 322 LME-NDPTIISDIIQKIKDDVVFYSKQKFSSNVVEKCLKCSTENERQPLLDILSQPESLD 380
Query: 253 QVASDKYGNYVIQT---ALVETMRQD 275
+ D+YGN+VIQ AL E +++
Sbjct: 381 ALVEDQYGNFVIQAFLDALPEKTKEE 406
>gi|440300551|gb|ELP92998.1| pumilio, putative [Entamoeba invadens IP1]
Length = 427
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 15/282 (5%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
++GS+ +Q+ + + L ++F ++ +L +G +V K +E + +
Sbjct: 120 QQGSRKIQQFIEAATDDELSQIFIIIQPAILDLTIDLFGNYVVQKLLEYGPPKLIVDVFK 179
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVI 120
+I+ + S++ +G ++K++ V+ S L V +K + + G+ VI
Sbjct: 180 QISGS---IVRLSLNTYGCRVIQKMLDVLPSS--CLQDVADEMKSNVVLFIEDQNGNHVI 234
Query: 121 LKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVNAA 180
K ++ FI + E + + H GC + I+ K + LI N
Sbjct: 235 QKFIDAIPEIGLGFIIKEIKEKVVDFSKHAYGCRVVQRLIE--KAAFLPIAGKLIE-NVW 291
Query: 181 SLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLK--YQNAV 238
LS ++ GNYV+QH++ + AI ++G + ++ K S VV+K L+ +
Sbjct: 292 DLSVNQYGNYVIQHLVQHGNNSQRVAIVKNIKGKLYEYAMKKYSSNVVEKCLRCCEEKEQ 351
Query: 239 HYIVEELL----NSDQILQVASDKYGNYVIQTALVETMRQDR 276
+ V+EL + D++ ++ D Y NYV+Q +VE M ++
Sbjct: 352 NVFVDELFRMEGDGDKVKEMVCDAYANYVVQR-IVEMMTDNQ 392
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 126 PSYNHKNDFIYQAALEHCLYLACHEQ-GCINLNNFIDNMKGSRRKQILHLISVNAASLSR 184
PS+ KN H C +Q G + FI+ QI +I L+
Sbjct: 99 PSFQKKN----VKGKPHNFQTLCKDQQGSRKIQQFIEAATDDELSQIFIIIQPAILDLTI 154
Query: 185 HRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY--QNAVHYIV 242
GNYVVQ +L P LI + + G V LSL G V+QK L + + +
Sbjct: 155 DLFGNYVVQKLLEYGPPKLIVDVFKQISGSIVRLSLNTYGCRVIQKMLDVLPSSCLQDVA 214
Query: 243 EELLNSDQILQVASDKYGNYVIQ 265
+E+ ++ ++ D+ GN+VIQ
Sbjct: 215 DEMKSN--VVLFIEDQNGNHVIQ 235
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 48/270 (17%)
Query: 33 LMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSSVKKLIKVVAQS 92
L Q G +FIE+ + +L+ I + I L ++D FG+ V+KL++
Sbjct: 116 LCKDQQGSRKIQQFIEAATDDELSQIFIIIQ---PAILDLTIDLFGNYVVQKLLEY---G 169
Query: 93 PPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQG 152
PP L ++ K++ GS V L+ + G
Sbjct: 170 PPKL--IVDVFKQI--------SGSIV-------------------------RLSLNTYG 194
Query: 153 CINLNNFIDNMKGSRRKQILHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALR 212
C + +D + S + + + N ++GN+V+Q ++ + I ++
Sbjct: 195 CRVIQKMLDVLPSSCLQDVADEMKSNVVLFIEDQNGNHVIQKFIDAIPEIGLGFIIKEIK 254
Query: 213 GHYVDLSLTKCGSFVVQKFLKYQNAVHYIVEELLNSDQILQVASDKYGNYVIQTALVETM 272
VD S G VVQ+ ++ + A I +L+ + + ++ ++YGNYVIQ +
Sbjct: 255 EKVVDFSKHAYGCRVVQRLIE-KAAFLPIAGKLI--ENVWDLSVNQYGNYVIQHLVQHGN 311
Query: 273 RQDRLSVHQRLVTKLQQHLAALRVMKYGSN 302
R+++ + + KL ++ A++ KY SN
Sbjct: 312 NSQRVAIVKNIKGKLYEY--AMK--KYSSN 337
>gi|452821137|gb|EME28171.1| RNA-binding protein [Galdieria sulphuraria]
Length = 996
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 116 GSSVILKCLEPSYNHKNDFIYQ---AALE-HCLYLACHEQGCINLNNFIDNMKGSRRKQI 171
G+ V+ K LE H ++ I Q LE H L L+ H GC + ++ +KG+ R Q+
Sbjct: 724 GNYVVQKLLE----HGDENIRQLLTKKLEGHMLSLSLHMYGCRVVQKALEVLKGNERTQL 779
Query: 172 LHLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKF 231
+ + + R ++GN+V+Q + L +P I I +++G V L+ G VVQ+
Sbjct: 780 VQELDGHVLQCIRDQNGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRV 839
Query: 232 LKYQNAVH--YIVEELLNSDQILQVASDKYGNYVIQTALVETMRQDRLSVHQRL----VT 285
L++ H I+ E++ + L D+YGNYVIQ +VE D +V ++ V
Sbjct: 840 LEHCPKEHKAEILAEIMGCARDL--IRDQYGNYVIQ-HIVEKGDADNKAVIMKVVLNEVV 896
Query: 286 KLQQHLAAL----RVMKYGS 301
QH A R ++YGS
Sbjct: 897 AFAQHKFASNVVERCLQYGS 916
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 127/323 (39%), Gaps = 63/323 (19%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + L + L+ +G +V K +E +E+ L+
Sbjct: 686 QHGSRFIQQKLEGANLEEIRSLVAELGPDIDRLVIDVFGNYVVQKLLEHGDENIRQLLTK 745
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVAQSP------PLLYHVMSALKRLFKFLMMTK 114
K+ L S+ +G V+K ++V+ + L HV+ ++ +
Sbjct: 746 KLEGH---MLSLSLHMYGCRVVQKALEVLKGNERTQLVQELDGHVLQCIR--------DQ 794
Query: 115 PGSSVILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHL 174
G+ VI KC+E FI + + LA H GC + +++ + +IL
Sbjct: 795 NGNHVIQKCIELVEPENIVFIVDSVKGQAVALAEHAYGCRVVQRVLEHCPKEHKAEILAE 854
Query: 175 ISVNAASLSRHRSGNYVVQHVLNLEDP---------FLIDAICFAL-------------- 211
I A L R + GNYV+QH++ D L + + FA
Sbjct: 855 IMGCARDLIRDQYGNYVIQHIVEKGDADNKAVIMKVVLNEVVAFAQHKFASNVVERCLQY 914
Query: 212 -----RGHYVDL------SLTKC----------GSFVVQKFLKYQNAVHYIVEELLNSDQ 250
R ++++ S C G++VVQ+ L N H + +Q
Sbjct: 915 GSPVQRMDFIEVLVRGKDSAEDCPLSNLVKDQFGNYVVQRILDVANEDHLKRVVSILKEQ 974
Query: 251 ILQVASDKYGNYVIQTALVETMR 273
I + YG ++I A +E +R
Sbjct: 975 IPYLKKYSYGKHII--AKLENLR 995
>gi|393245475|gb|EJD52985.1| ARM repeat-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 503
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 142/312 (45%), Gaps = 24/312 (7%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL S S +F +V +L+ +G +V K E +Q+
Sbjct: 49 QHGSRFIQQKLESATSEEKQIVFDEIVPESALQLIQDVFGNYVIQKLFEYG--TQVQKTA 106
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSV 119
L T ++ + L S+ +G V+K I+ + P + L+ ++M G+ V
Sbjct: 107 LANTMENHILQL-SLQMYGCRVVQKAIEYIL--PEQQASFVKELEAHVLKIVMDANGNHV 163
Query: 120 ILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
I K +E + F++ + +Y L+ H GC L + + + + +L +
Sbjct: 164 IQKLIERVSPERLGFVH--SFRGSVYELSTHPFGCRVLQRCFEYLTDDQTRPLLDELHKY 221
Query: 179 AASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL--KYQN 236
++L + + GNYVVQ VL P I LRG + ++ K S V +K L +
Sbjct: 222 TSNLMQDQFGNYVVQFVLEHGKPEDRLLIISRLRGQMLHMAKHKFASNVCEKALITADEE 281
Query: 237 AVHYIVEELLNS-----DQILQVASDKYGNYVIQTAL-VETMRQDRLSVHQRLVTKLQQH 290
+++E++ ++ + D++ NYV+Q AL V T Q + +LV ++ H
Sbjct: 282 NQRLLIDEIMTPRADGFSPVVTMMKDQFANYVLQRALSVATGEQKK-----QLVALVRSH 336
Query: 291 LAALRVMKYGSN 302
L ++ +Y SN
Sbjct: 337 LTNMK--RYSSN 346
>gi|328767389|gb|EGF77439.1| hypothetical protein BATDEDRAFT_91666 [Batrachochytrium
dendrobatidis JAM81]
Length = 869
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 32/315 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIIL 60
+ GS+++Q+KL + + +F + +LM+ +G +V K E + +Q ++
Sbjct: 555 QHGSRFIQQKLETCTNDEKQLVFDEIMPNALQLMTDVFGNYVIQKIFEYGSAAQKQILA- 613
Query: 61 KITFQDQLFLLASVDKFGSSSVKKLIKVVA--QSPPLLYHVMSALKRLFKFLMMTKPGSS 118
+ L S+ +G V+K + V Q L++ + + + K + G+
Sbjct: 614 --ELMEGSVLELSLQMYGCRVVQKAFEHVPIEQQARLIHELDGNVLKCVK----DQNGNH 667
Query: 119 VILKCLEPSYNHKNDFIYQAALEHCLYLACHEQGCINLNNFIDNMKGSRRKQILHLISVN 178
VI K +E FI A LA H GC + ++ + +L +
Sbjct: 668 VIQKAIERVSAEHIKFIIDAFHGQVYALATHPYGCRVIQRIFEHCSEEETQPLLGELHRY 727
Query: 179 AASLSRHRSGNYVVQHVLNLEDP----FLIDAICFALRGHYVDLSLTKCGSFVVQKFLKY 234
A SL + + GNYV+QH+L P F+I+ + +G + +S K S VV+K + +
Sbjct: 728 AISLIQDQYGNYVIQHILERGRPSDKLFVINKV----KGQILTMSKHKFASNVVEKCVAF 783
Query: 235 QNAVHY--IVEELLNSDQ-----ILQVASDKYGNYVIQTALVETMRQDRLSVHQR--LVT 285
+ I++E+ + + + D++ NYV+Q L D S Q+ LVT
Sbjct: 784 GSPADRQDIIDEVATTKSDGTTALFTMMKDQFANYVVQKML------DVASEPQKVMLVT 837
Query: 286 KLQQHLAALRVMKYG 300
K++ L +L+ YG
Sbjct: 838 KIKPQLPSLKKFTYG 852
>gi|302692892|ref|XP_003036125.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
gi|300109821|gb|EFJ01223.1| hypothetical protein SCHCODRAFT_51963 [Schizophyllum commune H4-8]
Length = 361
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 34/316 (10%)
Query: 1 EEGSQYLQEKLSSGDSRILDKLF-WVVSGFTFELMSGQYGRFVFGKFIESCNESQLALII 59
+ GS+++Q+KL + + +F +V +L+ +G +V K E + +Q+ +
Sbjct: 47 QHGSRFIQQKLETASTEEKQIVFDEIVPDNALQLIQDVFGNYVIQKLFE--HGTQVQKTV 104
Query: 60 LKITFQDQLFLLASVDKFGSSSVKKLIKVV------AQSPPLLYHVMSALKRLFKFLMMT 113
L T + + L S+ +G V+K I+ + A L HV+ +K
Sbjct: 105 LASTMEGHILPL-SLQMYGCRVVQKAIECILPEQQGAFVRELEAHVLKCVK--------D 155
Query: 114 KPGSSVILKCLEPSYNHKNDFIYQAALEHCLY-LACHEQGCINLNNFIDNMKGSRRKQIL 172
G+ VI K +E + F+ + +Y L+ H GC L ++++ ++
Sbjct: 156 ANGNHVIQKLIERVPADRLQFV--STFRGNVYDLSTHPYGCRVLQRSLEHLPHDMTYPLM 213
Query: 173 HLISVNAASLSRHRSGNYVVQHVLNLEDPFLIDAICFALRGHYVDLSLTKCGSFVVQKFL 232
+ +L++ + GNYVVQ V+ P + +RG + L+ K S V +K L
Sbjct: 214 DELHKYVLNLAQDQFGNYVVQFVIEHGSPTDKALVLNQMRGQILALARHKFASNVCEKAL 273
Query: 233 KYQNA---VHYIVEELLNS----DQILQVASDKYGNYVIQTALVETMRQDRLSVHQRLVT 285
+ ++ H I E ++ + ++ + D++ NYV+Q AL + + + L+
Sbjct: 274 VFADSETRAHLIDEIMMPTADGVSPLVIMMKDQFANYVLQRALATAEGEQK----EMLIA 329
Query: 286 KLQQHLAALRVMKYGS 301
K++ H+A +R +Y S
Sbjct: 330 KVKPHIANMR--RYSS 343
>gi|149239210|ref|XP_001525481.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450974|gb|EDK45230.1| hypothetical protein LELG_03409 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1163
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 133/274 (48%), Gaps = 26/274 (9%)
Query: 22 LFWVVSGFTFELMSGQYGRFVFGKFIESCNESQLALIILKITFQDQLFLLASVDKFGSSS 81
+F + +EL+ +G ++ K I CN+S L +I+ + F LF + SV++ G+ +
Sbjct: 397 IFDEIHSHMYELIIDPFGNYLVQKMIAYCNQSNLDMILDTLQF--NLFKI-SVNQHGTRA 453
Query: 82 VKKLIKVVAQSPPLLYHVMSALKRLFKFLMMTKPGSSVILKCLEPSYNHKNDFIYQAALE 141
++K+I ++ S L ++ LK L+ G+ VI K L FIY + +E
Sbjct: 454 LQKIIDSLSTSAQLNV-LIRGLKPHIIDLIKDLNGNHVIQKILNKYEPADCQFIYDSIIE 512
Query: 142 HCLYLACHEQGCINLNNFIDNMKGSRRKQ--ILHLISVNAASLSRHRSGNYVVQHVLNLE 199
+A H+ GC L ++++ ++ Q + L N L + GNYV+Q+++++
Sbjct: 513 DLYIVATHKHGCCVLQKCLNHVTPAQLNQFSLAILQYDNFKVLINDQFGNYVLQYLISIN 572
Query: 200 DPFLIDAICFALRGHY-----VDLSLTKCGSFVVQKFLK--YQNAVHYIVEELLNSDQIL 252
+ F + ++ ++L +K S VV+K+LK Y N + L D I
Sbjct: 573 S----LEVSFQVLQNFHQYGIMNLCNSKFSSNVVEKYLKNCYNNESVNVAFANLKFDLIY 628
Query: 253 QV--------ASDKYGNYVIQTALVETMRQDRLS 278
++ +D +GNYVIQT L++ + R++
Sbjct: 629 RILIDDLNTLINDPFGNYVIQT-LIDFLVNPRVN 661
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,264,692,927
Number of Sequences: 23463169
Number of extensions: 156885291
Number of successful extensions: 484862
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 565
Number of HSP's that attempted gapping in prelim test: 473934
Number of HSP's gapped (non-prelim): 3806
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 76 (33.9 bits)