Query         048248
Match_columns 316
No_of_seqs    155 out of 1639
Neff          10.3
Searched_HMMs 46136
Date          Fri Mar 29 07:46:08 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048248.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/048248hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02874 ankyrin repeat protei 100.0 3.2E-43   7E-48  318.0  32.5  296    5-315     2-312 (434)
  2 PHA02946 ankyin-like protein;  100.0 8.5E-43 1.9E-47  313.4  29.5  289    4-314    37-377 (446)
  3 PHA02946 ankyin-like protein;  100.0 1.3E-42 2.9E-47  312.2  30.6  283    6-315    11-320 (446)
  4 PHA02876 ankyrin repeat protei 100.0 8.9E-43 1.9E-47  331.5  28.9  300    4-316    41-467 (682)
  5 PHA03095 ankyrin-like protein; 100.0 1.1E-41 2.3E-46  312.0  30.4  283    9-315    19-313 (471)
  6 KOG0510 Ankyrin repeat protein 100.0 2.5E-42 5.5E-47  308.7  23.1  297    4-316    88-401 (929)
  7 PHA02716 CPXV016; CPX019; EVM0 100.0 2.7E-41 5.9E-46  313.2  29.3  281   13-315   151-563 (764)
  8 PHA03100 ankyrin repeat protei 100.0 8.8E-41 1.9E-45  306.6  27.1  278   15-316    13-307 (480)
  9 KOG0510 Ankyrin repeat protein 100.0 8.1E-41 1.7E-45  299.2  20.5  284    4-298   121-416 (929)
 10 PHA02876 ankyrin repeat protei 100.0 2.9E-39 6.2E-44  307.5  31.7  294    6-315   147-497 (682)
 11 PHA02874 ankyrin repeat protei 100.0 1.9E-38 4.2E-43  286.9  30.6  283    4-311    35-342 (434)
 12 PHA02716 CPXV016; CPX019; EVM0 100.0 5.7E-38 1.2E-42  291.1  28.8  293    4-315   177-590 (764)
 13 PHA02878 ankyrin repeat protei 100.0 4.1E-38 8.9E-43  287.9  27.3  279    6-314    39-323 (477)
 14 PHA02791 ankyrin-like protein; 100.0 6.9E-38 1.5E-42  263.6  24.6  231   14-278     9-242 (284)
 15 PHA03100 ankyrin repeat protei 100.0 1.1E-37 2.3E-42  286.1  26.6  257    4-281    35-308 (480)
 16 PHA03095 ankyrin-like protein; 100.0   5E-37 1.1E-41  281.1  27.5  257    4-281    47-315 (471)
 17 PHA02875 ankyrin repeat protei 100.0 6.8E-37 1.5E-41  275.5  27.8  244   38-300     2-246 (413)
 18 PHA02989 ankyrin repeat protei 100.0 1.6E-36 3.5E-41  278.2  29.3  279   11-315    10-312 (494)
 19 PHA02791 ankyrin-like protein; 100.0   1E-36 2.2E-41  256.6  24.5  231   48-314     9-242 (284)
 20 PHA02878 ankyrin repeat protei 100.0 3.2E-36 6.9E-41  275.4  27.6  281    7-316     3-291 (477)
 21 KOG4412 26S proteasome regulat 100.0   4E-37 8.6E-42  229.4  14.4  218   72-309     3-221 (226)
 22 KOG4412 26S proteasome regulat 100.0 3.3E-37 7.1E-42  229.8  13.9  207    7-265     6-213 (226)
 23 PHA02730 ankyrin-like protein; 100.0 4.1E-35 8.8E-40  267.4  28.7  132    4-141    41-181 (672)
 24 PHA02875 ankyrin repeat protei 100.0 6.7E-35 1.4E-39  262.6  27.9  252    5-276     3-261 (413)
 25 PHA02917 ankyrin-like protein; 100.0 4.3E-34 9.3E-39  266.6  28.9  287    6-315   105-509 (661)
 26 PHA02917 ankyrin-like protein; 100.0 7.4E-34 1.6E-38  265.0  29.7  294    4-316    32-476 (661)
 27 PHA02798 ankyrin-like protein; 100.0 2.7E-34 5.9E-39  263.3  26.4  273   16-315    17-314 (489)
 28 KOG4177 Ankyrin [Cell wall/mem 100.0 6.8E-36 1.5E-40  282.5  16.1  303    4-313   209-627 (1143)
 29 KOG4177 Ankyrin [Cell wall/mem 100.0 2.2E-35 4.7E-40  279.1  15.6  280    2-302   372-654 (1143)
 30 PHA02989 ankyrin repeat protei 100.0 2.4E-33 5.3E-38  257.3  27.2  256    4-280    35-313 (494)
 31 PHA02798 ankyrin-like protein; 100.0 4.4E-33 9.6E-38  255.2  25.5  250   11-281    45-316 (489)
 32 PHA02730 ankyrin-like protein; 100.0 1.5E-32 3.2E-37  250.7  27.6  307    4-316    77-522 (672)
 33 KOG0508 Ankyrin repeat protein 100.0   3E-33 6.6E-38  236.9  20.5  216    8-242     8-235 (615)
 34 KOG0509 Ankyrin repeat and DHH 100.0 9.9E-34 2.2E-38  249.0  16.6  211   39-266    45-255 (600)
 35 KOG0509 Ankyrin repeat and DHH 100.0 9.7E-32 2.1E-36  236.5  16.8  212   71-302    43-255 (600)
 36 PHA02792 ankyrin-like protein; 100.0 3.8E-29 8.2E-34  226.2  21.6  290    7-315    74-476 (631)
 37 KOG0508 Ankyrin repeat protein 100.0 2.8E-29   6E-34  213.0  14.8  198  111-315    38-238 (615)
 38 PHA02859 ankyrin repeat protei 100.0 8.6E-28 1.9E-32  195.4  18.8  177  112-303    18-203 (209)
 39 PHA02859 ankyrin repeat protei 100.0 2.3E-27 5.1E-32  192.8  18.6  176   70-267    19-203 (209)
 40 PHA02792 ankyrin-like protein; 100.0 3.4E-26 7.4E-31  207.1  25.8  274   29-316    62-434 (631)
 41 PHA02795 ankyrin-like protein;  99.9 7.7E-26 1.7E-30  197.9  19.3  212   16-246    60-286 (437)
 42 PHA02795 ankyrin-like protein;  99.9 8.1E-26 1.8E-30  197.7  18.4  188  121-315    83-285 (437)
 43 TIGR00870 trp transient-recept  99.9 8.7E-26 1.9E-30  216.9  18.8  254    4-265    17-299 (743)
 44 KOG4369 RTK signaling protein   99.9 1.2E-26 2.6E-31  213.7   8.3  302    1-313   754-1081(2131)
 45 TIGR00870 trp transient-recept  99.9 2.1E-25 4.5E-30  214.3  17.1   92  221-313   174-278 (743)
 46 KOG0502 Integral membrane anky  99.9   2E-25 4.2E-30  172.1  10.0  249    5-278    32-280 (296)
 47 KOG0502 Integral membrane anky  99.9 1.6E-25 3.4E-30  172.6   7.3  233    6-261    64-296 (296)
 48 PLN03192 Voltage-dependent pot  99.9 1.8E-23 3.9E-28  202.2  19.0  174  114-301   524-698 (823)
 49 PLN03192 Voltage-dependent pot  99.9 1.2E-23 2.7E-28  203.3  17.4  158  151-316   522-679 (823)
 50 KOG0507 CASK-interacting adapt  99.9 7.9E-24 1.7E-28  189.3  14.6  242    4-265     3-263 (854)
 51 KOG0514 Ankyrin repeat protein  99.9 5.8E-24 1.3E-28  175.4  10.6  163  108-278   261-429 (452)
 52 KOG0514 Ankyrin repeat protein  99.9 6.4E-24 1.4E-28  175.2  10.3  162  148-313   262-428 (452)
 53 KOG0507 CASK-interacting adapt  99.9 3.6E-23 7.7E-28  185.2  14.8  240   40-301     5-263 (854)
 54 PHA02741 hypothetical protein;  99.9 5.9E-23 1.3E-27  161.7  12.7  128  183-313    16-153 (169)
 55 KOG4369 RTK signaling protein   99.9 2.1E-23 4.6E-28  192.5   8.9  262   36-315   755-1050(2131)
 56 KOG0505 Myosin phosphatase, re  99.9 1.6E-22 3.5E-27  175.0  13.3  228    6-265    42-273 (527)
 57 PHA02736 Viral ankyrin protein  99.9 1.9E-22 4.1E-27  156.6   9.9  131  182-315    11-149 (154)
 58 PHA02741 hypothetical protein;  99.9   1E-21 2.2E-26  154.6  13.6  129  151-280    18-156 (169)
 59 PHA02743 Viral ankyrin protein  99.9 2.1E-21 4.5E-26  152.2  12.8  140  150-293    16-162 (166)
 60 PHA02743 Viral ankyrin protein  99.9   1E-20 2.2E-25  148.3  13.8  131  180-315    12-151 (166)
 61 PHA02736 Viral ankyrin protein  99.9 4.3E-21 9.3E-26  149.0  10.5  129  151-280    14-150 (154)
 62 KOG0505 Myosin phosphatase, re  99.9 6.8E-21 1.5E-25  165.0  12.6  229   41-302    43-274 (527)
 63 KOG0512 Fetal globin-inducing   99.8   2E-20 4.4E-25  139.3  12.4  145  156-304    65-210 (228)
 64 PHA02884 ankyrin repeat protei  99.8 9.5E-20 2.1E-24  153.7  15.3  157  109-278    26-184 (300)
 65 KOG0512 Fetal globin-inducing   99.8 3.4E-19 7.4E-24  132.8  13.4  143   42-200    67-210 (228)
 66 PHA02884 ankyrin repeat protei  99.8 1.5E-18 3.2E-23  146.5  15.6  150  151-314    29-184 (300)
 67 KOG0195 Integrin-linked kinase  99.8 3.2E-19 6.9E-24  143.4   4.7  111  150-263    30-140 (448)
 68 cd00204 ANK ankyrin repeats;    99.7 6.8E-17 1.5E-21  120.4  13.6  124  184-312     3-126 (126)
 69 KOG0195 Integrin-linked kinase  99.7 1.9E-17 4.2E-22  133.2   8.2  115  107-229    26-140 (448)
 70 cd00204 ANK ankyrin repeats;    99.7 8.6E-16 1.9E-20  114.4  13.8  123  151-276     4-126 (126)
 71 KOG3676 Ca2+-permeable cation   99.7 5.5E-16 1.2E-20  141.0  13.5  212    6-244   103-330 (782)
 72 PF12796 Ank_2:  Ankyrin repeat  99.7 3.6E-16 7.9E-21  109.5   9.4   82  192-279     1-82  (89)
 73 PF12796 Ank_2:  Ankyrin repeat  99.7 6.9E-16 1.5E-20  108.1   9.6   82  226-315     1-82  (89)
 74 KOG3676 Ca2+-permeable cation   99.6 2.3E-15   5E-20  137.0  13.4  219   74-314   103-330 (782)
 75 COG0666 Arp FOG: Ankyrin repea  99.6   1E-14 2.3E-19  120.2  14.3  127  183-313    68-201 (235)
 76 COG0666 Arp FOG: Ankyrin repea  99.6 2.6E-14 5.7E-19  117.8  12.0  127  151-279    70-203 (235)
 77 KOG4214 Myotrophin and similar  99.5 3.8E-14 8.2E-19   94.7   6.7  106  188-299     2-107 (117)
 78 KOG4214 Myotrophin and similar  99.5 1.2E-13 2.5E-18   92.4   8.6  102  156-261     4-105 (117)
 79 PF13857 Ank_5:  Ankyrin repeat  99.5 3.5E-14 7.6E-19   89.6   4.3   50  213-263     7-56  (56)
 80 PF13637 Ank_4:  Ankyrin repeat  99.5 9.3E-14   2E-18   87.2   6.2   53  256-311     1-53  (54)
 81 PF13637 Ank_4:  Ankyrin repeat  99.5   1E-13 2.2E-18   87.0   6.1   54  222-276     1-54  (54)
 82 PF13857 Ank_5:  Ankyrin repeat  99.5 5.4E-14 1.2E-18   88.7   4.2   56  241-299     1-56  (56)
 83 KOG1710 MYND Zn-finger and ank  99.4 3.2E-12   7E-17  103.3  10.0  123  154-278    12-134 (396)
 84 PTZ00322 6-phosphofructo-2-kin  99.4 2.3E-12   5E-17  122.0  10.3  106  156-263    84-195 (664)
 85 KOG1710 MYND Zn-finger and ank  99.4 7.2E-12 1.6E-16  101.3  10.7  124  114-244    11-134 (396)
 86 KOG0515 p53-interacting protei  99.4 2.4E-12 5.1E-17  112.0   8.3  113  195-311   557-671 (752)
 87 PTZ00322 6-phosphofructo-2-kin  99.3 5.3E-12 1.2E-16  119.5  10.6  107  117-230    84-196 (664)
 88 KOG0515 p53-interacting protei  99.3 1.3E-11 2.8E-16  107.5   8.7  119  157-277   553-673 (752)
 89 KOG0506 Glutaminase (contains   98.8 3.3E-09 7.1E-14   91.6   4.5   92  186-278   504-595 (622)
 90 KOG0506 Glutaminase (contains   98.7 9.1E-09   2E-13   88.9   4.3   93  219-314   503-595 (622)
 91 KOG0782 Predicted diacylglycer  98.7 5.6E-08 1.2E-12   85.9   8.6  121    6-137   868-989 (1004)
 92 KOG0783 Uncharacterized conser  98.7 1.8E-08 3.9E-13   92.7   5.2   89  180-270    44-133 (1267)
 93 KOG0818 GTPase-activating prot  98.7 6.6E-08 1.4E-12   84.1   8.4   86  157-244   136-222 (669)
 94 KOG0782 Predicted diacylglycer  98.7 6.9E-08 1.5E-12   85.4   8.5  116  193-312   871-987 (1004)
 95 PF13606 Ank_3:  Ankyrin repeat  98.6 5.2E-08 1.1E-12   52.4   3.9   27   37-63      1-27  (30)
 96 KOG0818 GTPase-activating prot  98.6 1.5E-07 3.2E-12   82.0   8.0   85  192-277   137-221 (669)
 97 KOG0783 Uncharacterized conser  98.6   3E-08 6.5E-13   91.3   4.0   89  210-302    40-129 (1267)
 98 PF13606 Ank_3:  Ankyrin repeat  98.6 5.6E-08 1.2E-12   52.3   3.2   24  292-315     2-25  (30)
 99 KOG0522 Ankyrin repeat protein  98.6 1.3E-07 2.7E-12   83.3   7.0   88  157-245    23-111 (560)
100 PF00023 Ank:  Ankyrin repeat H  98.6 9.8E-08 2.1E-12   52.8   4.0   32  221-253     1-32  (33)
101 KOG0522 Ankyrin repeat protein  98.6   2E-07 4.3E-12   82.0   7.3   88    6-94     22-110 (560)
102 KOG0520 Uncharacterized conser  98.5 9.3E-08   2E-12   90.5   5.2  130  183-313   569-701 (975)
103 PF00023 Ank:  Ankyrin repeat H  98.5   2E-07 4.4E-12   51.5   4.3   28   37-64      1-28  (33)
104 KOG0520 Uncharacterized conser  98.4 4.5E-07 9.8E-12   86.0   6.7  128  150-278   570-702 (975)
105 KOG0705 GTPase-activating prot  98.3 1.7E-06 3.8E-11   76.9   7.4   86  194-280   630-718 (749)
106 KOG0705 GTPase-activating prot  98.3   2E-06 4.4E-11   76.5   6.8   87  226-315   628-717 (749)
107 KOG3609 Receptor-activated Ca2  98.2   5E-06 1.1E-10   77.6   7.5   82  156-245    27-111 (822)
108 KOG2384 Major histocompatibili  98.1 5.9E-06 1.3E-10   63.5   5.4   68  180-247     4-71  (223)
109 KOG2384 Major histocompatibili  98.1   1E-05 2.2E-10   62.2   6.2   66  147-212     5-70  (223)
110 KOG3609 Receptor-activated Ca2  98.0 2.6E-05 5.7E-10   72.9   9.0  130    4-141    25-157 (822)
111 KOG0521 Putative GTPase activa  98.0 8.8E-06 1.9E-10   77.7   5.2   86  187-274   655-740 (785)
112 KOG0511 Ankyrin repeat protein  98.0 2.8E-05 6.2E-10   66.0   7.3   74    6-82     38-111 (516)
113 KOG0521 Putative GTPase activa  97.9 1.1E-05 2.3E-10   77.2   5.0   88  220-311   654-741 (785)
114 KOG0511 Ankyrin repeat protein  97.8 2.6E-05 5.7E-10   66.2   5.2   70  224-297    38-107 (516)
115 smart00248 ANK ankyrin repeats  96.7  0.0026 5.6E-08   32.7   3.3   23  292-314     2-24  (30)
116 smart00248 ANK ankyrin repeats  96.7  0.0037   8E-08   32.1   3.7   25   38-62      2-26  (30)
117 KOG2505 Ankyrin repeat protein  95.5   0.031 6.6E-07   49.9   5.7   47   33-80    425-471 (591)
118 KOG2505 Ankyrin repeat protein  94.8   0.064 1.4E-06   47.9   5.5   43  187-230   429-471 (591)
119 PF06128 Shigella_OspC:  Shigel  94.4     0.4 8.7E-06   38.6   8.5   45  236-280   231-278 (284)
120 PF06128 Shigella_OspC:  Shigel  92.1     1.5 3.2E-05   35.5   8.5   44  202-245   231-277 (284)
121 PF03158 DUF249:  Multigene fam  90.9     3.9 8.3E-05   32.1   9.4   51   39-93     47-97  (192)
122 PF11929 DUF3447:  Domain of un  87.3    0.81 1.8E-05   30.4   3.2   47  224-278     8-54  (76)
123 PF11929 DUF3447:  Domain of un  87.2     1.2 2.6E-05   29.5   4.0   49  190-246     8-56  (76)
124 PF03158 DUF249:  Multigene fam  83.4      20 0.00044   28.2  11.3   74    5-88     47-120 (192)
125 KOG4335 FERM domain-containing  58.1     8.5 0.00018   35.1   2.5   30  249-278   170-199 (558)
126 KOG4591 Uncharacterized conser  55.2     9.6 0.00021   30.3   2.1   49  254-302   220-270 (280)
127 KOG0513 Ca2+-independent phosp  38.3     7.3 0.00016   36.1  -1.0   24   68-91     51-74  (503)
128 KOG4591 Uncharacterized conser  29.6      35 0.00075   27.3   1.6   47  220-266   220-270 (280)
129 PF04053 Coatomer_WDAD:  Coatom  26.9 1.9E+02  0.0041   26.6   6.1  158    7-208   267-426 (443)
130 KOG1595 CCCH-type Zn-finger pr  24.6      21 0.00045   32.9  -0.4   70  221-295    57-129 (528)
131 KOG4335 FERM domain-containing  21.9      75  0.0016   29.3   2.4   67   14-80    153-219 (558)
132 PF09722 DUF2384:  Protein of u  21.9 1.2E+02  0.0026   18.2   2.7   40   15-59      9-48  (54)
133 KOG0513 Ca2+-independent phosp  20.8      46   0.001   31.0   1.0   46  223-269   137-182 (503)

No 1  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.2e-43  Score=317.97  Aligned_cols=296  Identities=23%  Similarity=0.256  Sum_probs=250.5

Q ss_pred             cHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC
Q 048248            5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      +..|+.|+..|+.+.++.++...+..++..+..|.||||.|+..|+.++|++|++.|++. +..+..|.||||.|+..|+
T Consensus         2 ~~~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~-n~~~~~~~t~L~~A~~~~~   80 (434)
T PHA02874          2 SQDLRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADI-NHINTKIPHPLLTAIKIGA   80 (434)
T ss_pred             cHHHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCC
Confidence            457899999999999999998888878888889999999999999999999999999874 4567789999999999999


Q ss_pred             hhHHHHhhccCCCCCCCC------c-------chhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCC
Q 048248           85 FGAAQIFMRPHGNGNNTG------T-------FDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQG  151 (316)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~------~-------~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~  151 (316)
                      .+++++|++.+.......      .       ....+..++..|.||||+|+..++.++++.|+..++++      +..+
T Consensus        81 ~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~------n~~d  154 (434)
T PHA02874         81 HDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV------NIED  154 (434)
T ss_pred             HHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC------CCcC
Confidence            999999998765432100      0       00023456889999999999999999999999988664      2356


Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHh
Q 048248          152 PNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQ  231 (316)
Q Consensus       152 ~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~  231 (316)
                      ..|.||||+|+..++.++++.|+..+. .++..|..|.||||+|+..|+.++++.|++.+.. ++.++..|+||||.|+.
T Consensus       155 ~~g~tpLh~A~~~~~~~iv~~Ll~~g~-~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~-i~~~~~~g~TpL~~A~~  232 (434)
T PHA02874        155 DNGCYPIHIAIKHNFFDIIKLLLEKGA-YANVKDNNGESPLHNAAEYGDYACIKLLIDHGNH-IMNKCKNGFTPLHNAII  232 (434)
T ss_pred             CCCCCHHHHHHHCCcHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHH
Confidence            689999999999999999999997764 5788999999999999999999999999977654 56688899999999999


Q ss_pred             cCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC-ChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcC-ChhHHH
Q 048248          232 NGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG-HADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINN-HFNIIL  309 (316)
Q Consensus       232 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~-~~~~~~  309 (316)
                      .+. ++++.|+.  +..++.+|..|+||||+|+..+ +.+++++|+..+.   .++.+|.+|.||||+|++.+ +..+++
T Consensus       233 ~~~-~~i~~Ll~--~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~ga---d~n~~d~~g~TpL~~A~~~~~~~~~ik  306 (434)
T PHA02874        233 HNR-SAIELLIN--NASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKA---DISIKDNKGENPIDTAFKYINKDPVIK  306 (434)
T ss_pred             CCh-HHHHHHHc--CCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcC---CCCCCCCCCCCHHHHHHHhCCccHHHH
Confidence            876 56676763  3457899999999999999876 7899999998864   47888999999999999887 678888


Q ss_pred             HHhhcC
Q 048248          310 VLARNM  315 (316)
Q Consensus       310 ~Ll~~~  315 (316)
                      .|+.++
T Consensus       307 ~ll~~~  312 (434)
T PHA02874        307 DIIANA  312 (434)
T ss_pred             HHHHhc
Confidence            888754


No 2  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=8.5e-43  Score=313.44  Aligned_cols=289  Identities=17%  Similarity=0.182  Sum_probs=201.2

Q ss_pred             ccHHHHHHHh--cCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH
Q 048248            4 VDHKLFRALR--HGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAAR   81 (316)
Q Consensus         4 ~~~~l~~a~~--~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~   81 (316)
                      ...+||.++.  .++.+.++.++. .|.+++.++..|+||||+|++.|+.++|++|++.|++. +..|.+|+||||+|+.
T Consensus        37 ~~~~Lh~~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdi-n~~d~~g~TpLh~A~~  114 (446)
T PHA02946         37 NYHILHAYCGIKGLDERFVEELLH-RGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADP-NACDKQHKTPLYYLSG  114 (446)
T ss_pred             CChHHHHHHHhcCCCHHHHHHHHH-CcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHH
Confidence            3467777653  335566766654 45778888999999999999999999999999988764 5678889999999887


Q ss_pred             hCC--hhHHHHhhccCCCCCCCC---cc--------------------hhhhhccCCCCCcHHHHHHhcCC--hhHHHHH
Q 048248           82 AGN--FGAAQIFMRPHGNGNNTG---TF--------------------DDILRKRDEEGNTPLHNAVRKCD--GKMAFTM  134 (316)
Q Consensus        82 ~g~--~~~~~~l~~~~~~~~~~~---~~--------------------~~~~~~~~~~g~t~L~~a~~~~~--~~~~~~l  134 (316)
                      .+.  .+++++|+..++..+...   +.                    ...++.+|..|+||||+|+..++  .++++.|
T Consensus       115 ~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~L  194 (446)
T PHA02946        115 TDDEVIERINLLVQYGAKINNSVDEEGCGPLLACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWM  194 (446)
T ss_pred             cCCchHHHHHHHHHcCCCcccccCCCCCcHHHHHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHH
Confidence            654  778888888776543210   00                    00123356777777777766544  3667777


Q ss_pred             HhhCCCcccccccccCCCCCchHHHHHHHhC--cHHHHHHHHHhccccccccccCCCcHHHHHHHhCc-HHHHHHhhcCC
Q 048248          135 IKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS--QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH-FKIACRLSDED  211 (316)
Q Consensus       135 l~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~--~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~-~~~~~~ll~~~  211 (316)
                      +..+.++      +.++..|.||||+|+..+  +.++++.|+.  +.+++.+|..|.||||+|++.++ .++++.|+..+
T Consensus       195 l~~Gadi------n~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~--gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g  266 (446)
T PHA02946        195 MKLGISP------SKPDHDGNTPLHIVCSKTVKNVDIINLLLP--STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTS  266 (446)
T ss_pred             HHcCCCC------cccCCCCCCHHHHHHHcCCCcHHHHHHHHc--CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCC
Confidence            7766554      234567778888888765  5666666653  35577888888888888888776 36666666554


Q ss_pred             CCc-------------------ccccC-CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH
Q 048248          212 DSL-------------------VYQHD-CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV  271 (316)
Q Consensus       212 ~~~-------------------~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~  271 (316)
                      +..                   .+..+ ..|.||||+|+..|+.++|++|++++        ..|+||||+|+.+|+.++
T Consensus       267 ~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~--------~~~~t~L~~A~~~~~~~~  338 (446)
T PHA02946        267 NVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDND--------IICEDAMYYAVLSEYETM  338 (446)
T ss_pred             CCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCC--------CccccHHHHHHHhCHHHH
Confidence            321                   11111 24668888888888888888888653        246788888888888888


Q ss_pred             HHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248          272 VVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARN  314 (316)
Q Consensus       272 ~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~  314 (316)
                      +++|+..+..   ++.. .+|+||||+|++.++.++++.|+.+
T Consensus       339 v~~Ll~~ga~---~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~  377 (446)
T PHA02946        339 VDYLLFNHFS---VDSV-VNGHTCMSECVRLNNPVILSKLMLH  377 (446)
T ss_pred             HHHHHHCCCC---CCCc-cccccHHHHHHHcCCHHHHHHHHhc
Confidence            8888877643   4553 4788888888888888888888764


No 3  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=1.3e-42  Score=312.16  Aligned_cols=283  Identities=16%  Similarity=0.154  Sum_probs=209.3

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHh--CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARF--GHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG   83 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g   83 (316)
                      -+++.+...++.+.++.++.....      ..+.++||.++..  .+.++|++|++.|++. +..|.+|+||||+|+..|
T Consensus        11 ~sl~~~~~~~n~~~~~~~l~~~~~------~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~G~TpLh~Aa~~g   83 (446)
T PHA02946         11 LSLYAKYNSKNLDVFRNMLQAIEP------SGNYHILHAYCGIKGLDERFVEELLHRGYSP-NETDDDGNYPLHIASKIN   83 (446)
T ss_pred             HHHHHHHccCcHHHHHHHHhccCC------CCCChHHHHHHHhcCCCHHHHHHHHHCcCCC-CccCCCCCCHHHHHHHcC
Confidence            367889999999999888854211      1247999988753  4678999999999874 567889999999999999


Q ss_pred             ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCC--hhHHHHHHhhCCCcccccccccCCCCCchHHHHH
Q 048248           84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCD--GKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSA  161 (316)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~--~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A  161 (316)
                      +.+++++|++.+++.          +.+|.+|+||||+|+..+.  .++++.|+..++++..     ..+..|.|||| |
T Consensus        84 ~~eiv~lLL~~GAdi----------n~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~-----~~d~~g~tpL~-a  147 (446)
T PHA02946         84 NNRIVAMLLTHGADP----------NACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINN-----SVDEEGCGPLL-A  147 (446)
T ss_pred             CHHHHHHHHHCcCCC----------CCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccc-----ccCCCCCcHHH-H
Confidence            999999999987653          3468899999999887653  6788899988876531     23556788887 5


Q ss_pred             HHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCc--HHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC--CHhH
Q 048248          162 IIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH--FKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG--QLSI  237 (316)
Q Consensus       162 ~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~--~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g--~~~i  237 (316)
                      +..++.++++.|+..+ .+++.+|..|+||||+|+..++  .++++.|++. +.+++.+|.+|.||||+|+..|  +.++
T Consensus       148 a~~~~~~vv~~Ll~~g-ad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~d~~G~TpLH~Aa~~~~~~~~i  225 (446)
T PHA02946        148 CTDPSERVFKKIMSIG-FEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKPDHDGNTPLHIVCSKTVKNVDI  225 (446)
T ss_pred             HHCCChHHHHHHHhcc-ccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCCcHHH
Confidence            5567778777777654 4577888888888888776544  4666666655 4455667888888888888775  6778


Q ss_pred             HHHHHhhCCCCccccccCCCcHHHHHHHcCC-hhHHHHHhcCcccc-----------------cccccCC-CCCCcHHHH
Q 048248          238 LENLLHSYPDSIEFIDNKNRNILHLAAQNGH-ADVVVFILKQPEVE-----------------DLINSSD-VDGNTPLHL  298 (316)
Q Consensus       238 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~-~~~~~~Ll~~~~~~-----------------~~~~~~d-~~g~t~L~~  298 (316)
                      +++|+.  +.+++.+|..|+||||+|+..++ .+++++|+..+...                 ..++..+ ..|.||||+
T Consensus       226 v~lLl~--gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~  303 (446)
T PHA02946        226 INLLLP--STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKM  303 (446)
T ss_pred             HHHHHc--CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHH
Confidence            887774  35578888888888888888777 47777777764321                 0122222 357788888


Q ss_pred             HHHcCChhHHHHHhhcC
Q 048248          299 AAINNHFNIILVLARNM  315 (316)
Q Consensus       299 A~~~~~~~~~~~Ll~~~  315 (316)
                      |++.|+.++|++|++++
T Consensus       304 Aa~~g~~eivk~Ll~~~  320 (446)
T PHA02946        304 AVEVGSIRCVKYLLDND  320 (446)
T ss_pred             HHHcCCHHHHHHHHHCC
Confidence            88888888888888764


No 4  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.9e-43  Score=331.46  Aligned_cols=300  Identities=22%  Similarity=0.249  Sum_probs=203.9

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHH-------------------------------------
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAA-------------------------------------   46 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~-------------------------------------   46 (316)
                      ..+|||+|+..|+.+.|+.++...+..+...+..|.||||+|+                                     
T Consensus        41 ~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  120 (682)
T PHA02876         41 PFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEA  120 (682)
T ss_pred             cchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHH
Confidence            4679999999999999988888877767777888999999666                                     


Q ss_pred             ---------------------------------HhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhc
Q 048248           47 ---------------------------------RFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMR   93 (316)
Q Consensus        47 ---------------------------------~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~   93 (316)
                                                       ..|+.+++++|++.|++. +..|..|+||||+|+..|+.+++++|++
T Consensus       121 ~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadv-n~~d~~G~TpLh~Aa~~G~~~iv~~LL~  199 (682)
T PHA02876        121 CIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEGGADV-NAKDIYCITPIHYAAERGNAKMVNLLLS  199 (682)
T ss_pred             HHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence                                             346677888888888764 5677889999999999999999999998


Q ss_pred             cCCCCCCCC--cc-----------hh---------------------------------------hhhccCCCCCcHHHH
Q 048248           94 PHGNGNNTG--TF-----------DD---------------------------------------ILRKRDEEGNTPLHN  121 (316)
Q Consensus        94 ~~~~~~~~~--~~-----------~~---------------------------------------~~~~~~~~g~t~L~~  121 (316)
                      .+++.+...  +.           .+                                       .++..|..|.||||+
T Consensus       200 ~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~  279 (682)
T PHA02876        200 YGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHH  279 (682)
T ss_pred             CCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence            765432110  00           00                                       011234456666666


Q ss_pred             HHhcCCh-hHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC-cHHHHHHHHHhccccccccccCCCcHHHHHHHhC
Q 048248          122 AVRKCDG-KMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS-QFVVMAKILEAKRDLINVRDERNRNPLRYAAALG  199 (316)
Q Consensus       122 a~~~~~~-~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~-~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g  199 (316)
                      |+..++. ++++.|+..+.++      +.++..|.||||+|+..| ..+.++.|+..+ .+++.+|..|.||||+|+..+
T Consensus       280 Aa~~~~~~~iv~lLl~~gadi------n~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~g-adin~~d~~g~TpLh~A~~~~  352 (682)
T PHA02876        280 ASQAPSLSRLVPKLLERGADV------NAKNIKGETPLYLMAKNGYDTENIRTLIMLG-ADVNAADRLYITPLHQASTLD  352 (682)
T ss_pred             HHhCCCHHHHHHHHHHCCCCC------CCcCCCCCCHHHHHHHhCCCHHHHHHHHHcC-CCCCCcccCCCcHHHHHHHhC
Confidence            6666654 3555555555443      234455666666666666 355555555443 345666666777777766654


Q ss_pred             c-HHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCC-hhHHHHHhc
Q 048248          200 H-FKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGH-ADVVVFILK  277 (316)
Q Consensus       200 ~-~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~-~~~~~~Ll~  277 (316)
                      . .+++..|+ ..+.+++.+|..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..+. ..++++|++
T Consensus       353 ~~~~iv~lLl-~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ga-d~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~  430 (682)
T PHA02876        353 RNKDIVITLL-ELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGA-DIEALSQKIGTALHFALCGTNPYMSVKTLID  430 (682)
T ss_pred             CcHHHHHHHH-HcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CccccCCCCCchHHHHHHcCCHHHHHHHHHh
Confidence            3 34444443 4445556677777777777777777777777776543 356677777777777776554 345667776


Q ss_pred             CcccccccccCCCCCCcHHHHHHHcC-ChhHHHHHhhcCC
Q 048248          278 QPEVEDLINSSDVDGNTPLHLAAINN-HFNIILVLARNMS  316 (316)
Q Consensus       278 ~~~~~~~~~~~d~~g~t~L~~A~~~~-~~~~~~~Ll~~~~  316 (316)
                      .+.   .++.+|.+|+||||+|+..+ +.+++++|++.++
T Consensus       431 ~ga---din~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Ga  467 (682)
T PHA02876        431 RGA---NVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGA  467 (682)
T ss_pred             CCC---CCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCC
Confidence            653   46788999999999999877 6899999998763


No 5  
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.1e-41  Score=312.01  Aligned_cols=283  Identities=20%  Similarity=0.247  Sum_probs=241.2

Q ss_pred             HHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhC---CHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC-C
Q 048248            9 FRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFG---HEILVMEILKHQSDLVSVPNHKSETPMHVAARAG-N   84 (316)
Q Consensus         9 ~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g-~   84 (316)
                      +.++..++.+.++.++.. |.+++..+..|.||||+|+..+   +.+++++|++.|++. +..+..|+||||+|+..| .
T Consensus        19 ~~~~~~~~~~~v~~Ll~~-ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadi-n~~~~~g~TpLh~A~~~~~~   96 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAA-GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADV-NAPERCGFTPLHLYLYNATT   96 (471)
T ss_pred             HHcCCCCCHHHHHHHHHc-CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCc
Confidence            456788899999888765 5778999999999999999998   899999999999875 567789999999999999 5


Q ss_pred             hhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHH--hcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHH
Q 048248           85 FGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAV--RKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAI  162 (316)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~  162 (316)
                      .+++++|++.+++          ++..|..|.||||+|+  ..++.++++.|+..++++.      ..+..|.||||+|+
T Consensus        97 ~~iv~lLl~~ga~----------in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~------~~d~~g~tpL~~a~  160 (471)
T PHA03095         97 LDVIKLLIKAGAD----------VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN------ALDLYGMTPLAVLL  160 (471)
T ss_pred             HHHHHHHHHcCCC----------CCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC------ccCCCCCCHHHHHH
Confidence            9999999987654          3456889999999999  4457889999999887653      34667899999998


Q ss_pred             HhC--cHHHHHHHHHhccccccccccCCCcHHHHHHHh--CcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH--h
Q 048248          163 IKS--QFVVMAKILEAKRDLINVRDERNRNPLRYAAAL--GHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL--S  236 (316)
Q Consensus       163 ~~~--~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~--g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~--~  236 (316)
                      ..+  +.++++.|+..+.+ ++..|..|.||||+|+..  +..++++.|+..+ .+++.+|..|+||||+|+..|+.  .
T Consensus       161 ~~~~~~~~iv~~Ll~~g~~-~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~  238 (471)
T PHA03095        161 KSRNANVELLRLLIDAGAD-VYAVDDRFRSLLHHHLQSFKPRARIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRS  238 (471)
T ss_pred             HcCCCCHHHHHHHHHcCCC-CcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHH
Confidence            765  57888888877654 666799999999999975  5567787777665 55678999999999999999975  5


Q ss_pred             HHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          237 ILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       237 iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      +++.|+..+ .+++.+|..|+||||+|+..|+.+++++|++.|.   .++.+|.+|+||||+|++.|+.++++.|++++
T Consensus       239 ~v~~ll~~g-~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~ga---d~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~  313 (471)
T PHA03095        239 LVLPLLIAG-ISINARNRYGQTPLHYAAVFNNPRACRRLIALGA---DINAVSSDGNTPLSLMVRNNNGRAVRAALAKN  313 (471)
T ss_pred             HHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCcccCCCCCCHHHHHHHhCCHHHHHHHHHhC
Confidence            788888765 5579999999999999999999999999998864   46788999999999999999999999999864


No 6  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=2.5e-42  Score=308.74  Aligned_cols=297  Identities=26%  Similarity=0.340  Sum_probs=252.5

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG   83 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g   83 (316)
                      ...|||.|+.....+.++.++.. |.++.-.+.++.+|+|+|+..|..++++.|++.+.+ ++..|..|.||||+||..+
T Consensus        88 ~n~~l~~a~~~~~~~~i~~Lls~-gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~d-vnl~de~~~TpLh~A~~~~  165 (929)
T KOG0510|consen   88 DNTPLHAAVEYNQGDKIQVLLSY-GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGAD-VNLEDENGFTPLHLAARKN  165 (929)
T ss_pred             cCchhHHHhhcchHHHHHHHHhc-CCCCChhhhhccCchhhccccchHHHHHHHHHhcCC-ccccccCCCchhhHHHhcC
Confidence            45789999999999999666654 567777888999999999999999999999999965 5678888999999999999


Q ss_pred             ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH
Q 048248           84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII  163 (316)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~  163 (316)
                      +.+..+.|+..++++          .+.|.+|++|+|.|++++..+..+.++.+.+.. +....+..++.+.||||.|+.
T Consensus       166 ~~E~~k~Li~~~a~~----------~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~-r~~~in~~~n~~~~pLhlAve  234 (929)
T KOG0510|consen  166 KVEAKKELINKGADP----------CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYE-RQTHINFDNNEKATPLHLAVE  234 (929)
T ss_pred             hHHHHHHHHhcCCCC----------CcccCcCCchHHHHHHhcchhhhhhhhccccch-hhcccccccCCCCcchhhhhh
Confidence            999888888876653          346889999999999999999999988844322 223334456678899999999


Q ss_pred             hCcHHHHHHHHHhcccc--------------ccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248          164 KSQFVVMAKILEAKRDL--------------INVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA  229 (316)
Q Consensus       164 ~~~~~~~~~ll~~~~~~--------------~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A  229 (316)
                      .|+.+.++.+|+.+...              ++..|++|.||||+|+++|+.+.+..|+..+.+ ++.+++++.||||.|
T Consensus       235 ~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~-I~~kn~d~~spLH~A  313 (929)
T KOG0510|consen  235 GGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGAS-INSKNKDEESPLHFA  313 (929)
T ss_pred             cCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCc-ccccCCCCCCchHHH
Confidence            99999999999865422              345689999999999999999999988876665 567899999999999


Q ss_pred             HhcCCHhHHHHHHh-hCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccc--cCCCCCCcHHHHHHHcCChh
Q 048248          230 SQNGQLSILENLLH-SYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLIN--SSDVDGNTPLHLAAINNHFN  306 (316)
Q Consensus       230 ~~~g~~~iv~~Ll~-~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~--~~d~~g~t~L~~A~~~~~~~  306 (316)
                      |++|+.++|+.|++ .+...++..|..|.||||.|+++||.++++.|+.+|+..  .+  ..|.+|+||||+|+..|+..
T Consensus       314 A~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~--~~~~e~D~dg~TaLH~Aa~~g~~~  391 (929)
T KOG0510|consen  314 AIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF--LNMSEADSDGNTALHLAAKYGNTS  391 (929)
T ss_pred             HHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh--hcccccccCCchhhhHHHHhccHH
Confidence            99999999999998 555567888999999999999999999999999998753  33  34999999999999999999


Q ss_pred             HHHHHhhcCC
Q 048248          307 IILVLARNMS  316 (316)
Q Consensus       307 ~~~~Ll~~~~  316 (316)
                      +|.+|+.+|.
T Consensus       392 av~~Li~~Ga  401 (929)
T KOG0510|consen  392 AVQKLISHGA  401 (929)
T ss_pred             HHHHHHHcCC
Confidence            9999998764


No 7  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=2.7e-41  Score=313.19  Aligned_cols=281  Identities=17%  Similarity=0.187  Sum_probs=220.2

Q ss_pred             hcCChHHHHHHHHhcCCccccc-cCCCChHHHHHHH--hCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh--hH
Q 048248           13 RHGYTDKVREFARLNGNRILGT-SQNGDTALHIAAR--FGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF--GA   87 (316)
Q Consensus        13 ~~g~~~~~~~ll~~~~~~~~~~-~~~g~t~Lh~A~~--~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~--~~   87 (316)
                      ..++.+.++.|+..+..+++.. +..|.||||+|+.  +++.++|++|++.|++ ++..|.+|.||||+|+..|+.  ++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-VN~kD~~G~TPLH~Aa~~g~~~~eI  229 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVN-VNLQNNHLITPLHTYLITGNVCASV  229 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHHHHcCCCCHHH
Confidence            3578888877776653778887 8889999998864  3568999999998877 456788899999999999864  88


Q ss_pred             HHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHH-------------------------------------hcCChhH
Q 048248           88 AQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAV-------------------------------------RKCDGKM  130 (316)
Q Consensus        88 ~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~-------------------------------------~~~~~~~  130 (316)
                      +++|++.+++.          +.+|..|+||||+|+                                     +.++.++
T Consensus       230 VklLLe~GADV----------N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~lei  299 (764)
T PHA02716        230 IKKIIELGGDM----------DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISV  299 (764)
T ss_pred             HHHHHHcCCCC----------CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHH
Confidence            99999876653          345788999998764                                     3355666


Q ss_pred             HHHHHhhCCCcccccccccCCCCCchHHHHHHH--hCcHHHHHHHHHhccccccccccCCCcHHHHHHHh----------
Q 048248          131 AFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII--KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAAL----------  198 (316)
Q Consensus       131 ~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~--~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~----------  198 (316)
                      ++.|++.++++      +.++..|.||||+|+.  .++.++++.|++.+ ++++.+|..|+||||+|+..          
T Consensus       300 VklLLe~GAdI------N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~G-ADIN~kD~~G~TPLH~A~~~lav~~~ld~~  372 (764)
T PHA02716        300 VYSFLQPGVKL------HYKDSAGRTCLHQYILRHNISTDIIKLLHEYG-NDLNEPDNIGNTVLHTYLSMLSVVNILDPE  372 (764)
T ss_pred             HHHHHhCCCce------eccCCCCCCHHHHHHHHhCCCchHHHHHHHcC-CCCccCCCCCCCHHHHHHHhhhhhcccccc
Confidence            77777766543      3457789999999864  45788999888765 56899999999999998752          


Q ss_pred             ----CcHHHHHHhhcCCCCcccccCCCCCcHHHH----HHhcCCHhHHHHHHhhCCC-----------------------
Q 048248          199 ----GHFKIACRLSDEDDSLVYQHDCNGQSPLHL----ASQNGQLSILENLLHSYPD-----------------------  247 (316)
Q Consensus       199 ----g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~----A~~~g~~~iv~~Ll~~~~~-----------------------  247 (316)
                          ++.++++.|++.+ ++++.+|..|+||||.    |...++.+++++|++.+..                       
T Consensus       373 ~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lh  451 (764)
T PHA02716        373 TDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIH  451 (764)
T ss_pred             ccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHH
Confidence                5788999898764 5677899999999994    2235788999988874210                       


Q ss_pred             -------------------------------------CccccccCCCcHHHHHHHcCChh-----HHHHHhcCccccccc
Q 048248          248 -------------------------------------SIEFIDNKNRNILHLAAQNGHAD-----VVVFILKQPEVEDLI  285 (316)
Q Consensus       248 -------------------------------------~~~~~d~~g~tpLh~A~~~g~~~-----~~~~Ll~~~~~~~~~  285 (316)
                                                           .++.+|..|+||||+|+..|+.+     ++++|++.|.   .+
T Consensus       452 h~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GA---DI  528 (764)
T PHA02716        452 HIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQY---NI  528 (764)
T ss_pred             HHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCC---CC
Confidence                                                 12334778999999999998874     4599998864   47


Q ss_pred             ccCCCCCCcHHHHHHHcCCh-----hHHHHHhhcC
Q 048248          286 NSSDVDGNTPLHLAAINNHF-----NIILVLARNM  315 (316)
Q Consensus       286 ~~~d~~g~t~L~~A~~~~~~-----~~~~~Ll~~~  315 (316)
                      +.+|.+|+||||+|+++|+.     ++++.|++++
T Consensus       529 N~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~g  563 (764)
T PHA02716        529 NIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKR  563 (764)
T ss_pred             cccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcC
Confidence            88999999999999999987     9999999876


No 8  
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=8.8e-41  Score=306.58  Aligned_cols=278  Identities=19%  Similarity=0.241  Sum_probs=241.8

Q ss_pred             CChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHH-----HHHhCChhHHH
Q 048248           15 GYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHV-----AARAGNFGAAQ   89 (316)
Q Consensus        15 g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~-----A~~~g~~~~~~   89 (316)
                      ...+.++.++.. +...+..+..+.||||+|++.++.++|++|++.|++. ...+..|.||||+     |+..++.++++
T Consensus        13 ~~~~~~~~~~~~-~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~-~~~~~~~~t~L~~~~~~~a~~~~~~~iv~   90 (480)
T PHA03100         13 IKVKNIKYIIME-DDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADI-NSSTKNNSTPLHYLSNIKYNLTDVKEIVK   90 (480)
T ss_pred             HHHHHHHHHHhc-CccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCC-CCccccCcCHHHHHHHHHHHhhchHHHHH
Confidence            344566666644 4556667889999999999999999999999998874 4567789999999     99999999999


Q ss_pred             HhhccCCCCCCCCcchhhhhccCCCCCcHHHHHH--hcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC--
Q 048248           90 IFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAV--RKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS--  165 (316)
Q Consensus        90 ~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~--  165 (316)
                      +|++.++..          +..|..|.||||+|+  ..++.++++.|++.+++.      ...+..|.||||+|+..+  
T Consensus        91 ~Ll~~ga~i----------~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~  154 (480)
T PHA03100         91 LLLEYGANV----------NAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV------NIKNSDGENLLHLYLESNKI  154 (480)
T ss_pred             HHHHCCCCC----------CCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCC------CccCCCCCcHHHHHHHcCCC
Confidence            999876542          446889999999999  999999999999988664      235668899999999999  


Q ss_pred             cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCC------CcHHHHHHhcCC--HhH
Q 048248          166 QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNG------QSPLHLASQNGQ--LSI  237 (316)
Q Consensus       166 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g------~tpLh~A~~~g~--~~i  237 (316)
                      +.++++.|+..+. +++.+|..|.||||+|+..|+.++++.|++.+.. ++..+..|      .||||.|+..|+  .++
T Consensus       155 ~~~iv~~Ll~~g~-din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~i  232 (480)
T PHA03100        155 DLKILKLLIDKGV-DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGAD-INAGDIETLLFTIFETPLHIAACYNEITLEV  232 (480)
T ss_pred             hHHHHHHHHHCCC-CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCC-ccCCCCCCCcHHHHHhHHHHHHHhCcCcHHH
Confidence            9999999988765 4788999999999999999999999999977654 55677778      899999999999  999


Q ss_pred             HHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248          238 LENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS  316 (316)
Q Consensus       238 v~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~  316 (316)
                      +++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+.   .++.+|..|.||||+|+..++.+++++|+++++
T Consensus       233 v~~Ll~~g-~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga---d~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        233 VNYLLSYG-VPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA---NPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             HHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence            99999875 4578999999999999999999999999999875   478889999999999999999999999998764


No 9  
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=8.1e-41  Score=299.15  Aligned_cols=284  Identities=24%  Similarity=0.315  Sum_probs=244.4

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG   83 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g   83 (316)
                      ...|+|.|+..|+.+.++.++..+ .+++..+..|.||||+||..++.+..+.|++.+++. ...|.+|.+|+|.|+.+|
T Consensus       121 ~~aplh~A~~~~~~s~L~~Ll~~~-~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~-~K~~~~~~~~iH~aa~s~  198 (929)
T KOG0510|consen  121 KNAPLHLAADSGNYSCLKLLLDYG-ADVNLEDENGFTPLHLAARKNKVEAKKELINKGADP-CKSDIDGNFPIHEAARSG  198 (929)
T ss_pred             ccCchhhccccchHHHHHHHHHhc-CCccccccCCCchhhHHHhcChHHHHHHHHhcCCCC-CcccCcCCchHHHHHHhc
Confidence            456999999999999998888765 889999999999999999999999888888888875 557899999999999999


Q ss_pred             ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccc---------cccccCCCCC
Q 048248           84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRY---------NNKAKQGPNN  154 (316)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~---------~~~~~~~~~~  154 (316)
                      ..++.++++..++..-     ...++.-+.+|.||||.|+..|+.++++.+++.+......         .-.+..|.+|
T Consensus       199 s~e~mEi~l~~~g~~r-----~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg  273 (929)
T KOG0510|consen  199 SKECMEIFLPEHGYER-----QTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDG  273 (929)
T ss_pred             chhhhhhhhccccchh-----hcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccC
Confidence            9999999998543311     1135556889999999999999999999999987644211         1224568899


Q ss_pred             chHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhc-CCCCcccccCCCCCcHHHHHHhcC
Q 048248          155 LTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSD-EDDSLVYQHDCNGQSPLHLASQNG  233 (316)
Q Consensus       155 ~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~-~~~~~~~~~d~~g~tpLh~A~~~g  233 (316)
                      .||||+|++.|+.+.+..|+..+. .++.++.++.||||+|+..|....++.|++ .+-.+.+..|-.|+||||+|+++|
T Consensus       274 ~tpLH~a~r~G~~~svd~Ll~~Ga-~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~g  352 (929)
T KOG0510|consen  274 CTPLHYAARQGGPESVDNLLGFGA-SINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSG  352 (929)
T ss_pred             CchHHHHHHcCChhHHHHHHHcCC-cccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcC
Confidence            999999999999999999887765 489999999999999999999999999999 566677888899999999999999


Q ss_pred             CHhHHHHHHhhCCCCcc--ccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHH
Q 048248          234 QLSILENLLHSYPDSIE--FIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHL  298 (316)
Q Consensus       234 ~~~iv~~Ll~~~~~~~~--~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~  298 (316)
                      |..+++.|++++....+  ..|.+|.||||+|+.+|+..++++|+..|..   +..+|+.|.|++++
T Consensus       353 H~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~---I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  353 HDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGAD---IGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCc---eeeccccccccccc
Confidence            99999999998766543  5699999999999999999999999999753   56678889998884


No 10 
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.9e-39  Score=307.47  Aligned_cols=294  Identities=18%  Similarity=0.196  Sum_probs=214.7

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF   85 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~   85 (316)
                      .+++.++..|+.+.++.|+ ..|.+++..+..|+||||+|++.|+.++|++|++.|++. +..+.+|.||||+|+..|+.
T Consensus       147 ~~l~~~i~~~~~~i~k~Ll-~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~-n~~~~~g~t~L~~A~~~~~~  224 (682)
T PHA02876        147 KLIKERIQQDELLIAEMLL-EGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADV-NIIALDDLSVLECAVDSKNI  224 (682)
T ss_pred             HHHHHHHHCCcHHHHHHHH-hCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-CccCCCCCCHHHHHHHcCCH
Confidence            4566666667776664444 334566666667777777777777777777777766553 33445566666666666665


Q ss_pred             hHHHHhhccCCC-----------------------------CCCC---C-----------cchh----------hhhccC
Q 048248           86 GAAQIFMRPHGN-----------------------------GNNT---G-----------TFDD----------ILRKRD  112 (316)
Q Consensus        86 ~~~~~l~~~~~~-----------------------------~~~~---~-----------~~~~----------~~~~~~  112 (316)
                      ++++.+++....                             .+..   +           ....          .+...|
T Consensus       225 ~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d  304 (682)
T PHA02876        225 DTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN  304 (682)
T ss_pred             HHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcC
Confidence            555554432211                             0000   0           0000          123468


Q ss_pred             CCCCcHHHHHHhcC-ChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC-cHHHHHHHHHhccccccccccCCCc
Q 048248          113 EEGNTPLHNAVRKC-DGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS-QFVVMAKILEAKRDLINVRDERNRN  190 (316)
Q Consensus       113 ~~g~t~L~~a~~~~-~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~-~~~~~~~ll~~~~~~~~~~d~~g~t  190 (316)
                      ..|.||||+|+..+ +.++++.|+..+.++      +..+..|.||||+|+..+ +.++++.|+. .+.+++.+|..|.|
T Consensus       305 ~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadi------n~~d~~g~TpLh~A~~~~~~~~iv~lLl~-~gadin~~d~~G~T  377 (682)
T PHA02876        305 IKGETPLYLMAKNGYDTENIRTLIMLGADV------NAADRLYITPLHQASTLDRNKDIVITLLE-LGANVNARDYCDKT  377 (682)
T ss_pred             CCCCCHHHHHHHhCCCHHHHHHHHHcCCCC------CCcccCCCcHHHHHHHhCCcHHHHHHHHH-cCCCCccCCCCCCC
Confidence            89999999999998 588999999887664      335668899999999865 4555555554 45668999999999


Q ss_pred             HHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC-HhHHHHHHhhCCCCccccccCCCcHHHHHHHcC-C
Q 048248          191 PLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ-LSILENLLHSYPDSIEFIDNKNRNILHLAAQNG-H  268 (316)
Q Consensus       191 pLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~-~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g-~  268 (316)
                      |||+|+..|+.++++.|++.++ +++..+..|.||||+|+..++ ..++++|++.+ .+++.+|..|+||||+|+..| +
T Consensus       378 pLh~Aa~~~~~~iv~~Ll~~ga-d~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~g-adin~~d~~G~TpLh~Aa~~~~~  455 (682)
T PHA02876        378 PIHYAAVRNNVVIINTLLDYGA-DIEALSQKIGTALHFALCGTNPYMSVKTLIDRG-ANVNSKNKDLSTPLHYACKKNCK  455 (682)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCC-CccccCCCCCchHHHHHHcCCHHHHHHHHHhCC-CCCCcCCCCCChHHHHHHHhCCc
Confidence            9999999999999999997665 456788899999999997765 56788888765 557999999999999999977 6


Q ss_pred             hhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          269 ADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       269 ~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      .+++++|++.|.   .++.+|..|.|||++|+..+  +++++|+..+
T Consensus       456 ~~iv~lLl~~Ga---d~n~~d~~g~tpl~~a~~~~--~~v~~Ll~~~  497 (682)
T PHA02876        456 LDVIEMLLDNGA---DVNAINIQNQYPLLIALEYH--GIVNILLHYG  497 (682)
T ss_pred             HHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHhC--CHHHHHHHCC
Confidence            899999999874   47788999999999999765  5788887654


No 11 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.9e-38  Score=286.86  Aligned_cols=283  Identities=19%  Similarity=0.246  Sum_probs=231.9

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCc-------------------
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDL-------------------   64 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~-------------------   64 (316)
                      ..+|||.|+..|+.+.++.|+.. |.+++..+..|.||||+|+..|+.+++++|++.+++.                   
T Consensus        35 ~~tpL~~A~~~g~~~iv~~Ll~~-Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~  113 (434)
T PHA02874         35 TTTPLIDAIRSGDAKIVELFIKH-GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDC  113 (434)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHC
Confidence            46899999999999999877754 5678888899999999999999999999999876542                   


Q ss_pred             ---cccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCc
Q 048248           65 ---VSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEP  141 (316)
Q Consensus        65 ---~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~  141 (316)
                         ++..+..|.||||+|+..|+.+++++|++.+.+.          +.+|..|.||||+|+..++.++++.|+..+...
T Consensus       114 g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~----------n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~  183 (434)
T PHA02874        114 GIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV----------NIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYA  183 (434)
T ss_pred             cCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCC----------CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC
Confidence               3346778999999999999999999999876543          346889999999999999999999999987654


Q ss_pred             ccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCC
Q 048248          142 IRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCN  221 (316)
Q Consensus       142 ~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~  221 (316)
                            ...+..|.||||+|+..|+.++++.|+..+. .++.++..|.||||+|+..+. +.+..|+.  +..++.+|.+
T Consensus       184 ------n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~-~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll~--~~~in~~d~~  253 (434)
T PHA02874        184 ------NVKDNNGESPLHNAAEYGDYACIKLLIDHGN-HIMNKCKNGFTPLHNAIIHNR-SAIELLIN--NASINDQDID  253 (434)
T ss_pred             ------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCcCCCCCCCCHHHHHHHCCh-HHHHHHHc--CCCCCCcCCC
Confidence                  2346678999999999999999999998765 478889999999999999765 45555553  4556788999


Q ss_pred             CCcHHHHHHhcC-CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC-ChhHHHHHhcCcccccccccCCCC-CCcHHHH
Q 048248          222 GQSPLHLASQNG-QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG-HADVVVFILKQPEVEDLINSSDVD-GNTPLHL  298 (316)
Q Consensus       222 g~tpLh~A~~~g-~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g-~~~~~~~Ll~~~~~~~~~~~~d~~-g~t~L~~  298 (316)
                      |+||||+|+..+ +.+++++|++.+. +++.+|..|.||||+|+.++ +.++++.|+.....   ++..+.. +.+++..
T Consensus       254 G~TpLh~A~~~~~~~~iv~~Ll~~ga-d~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~---~~~~~~~~~~~~~~~  329 (434)
T PHA02874        254 GSTPLHHAINPPCDIDIIDILLYHKA-DISIKDNKGENPIDTAFKYINKDPVIKDIIANAVL---IKEADKLKDSDFLEH  329 (434)
T ss_pred             CCCHHHHHHhcCCcHHHHHHHHHCcC-CCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhcCc---hhhccccchhHHHHH
Confidence            999999999875 8899999998764 47999999999999999987 67888988877543   2222332 3566777


Q ss_pred             HHHcCChhHHHHH
Q 048248          299 AAINNHFNIILVL  311 (316)
Q Consensus       299 A~~~~~~~~~~~L  311 (316)
                      +...++..+-.++
T Consensus       330 ~~i~~~~~~~~~~  342 (434)
T PHA02874        330 IEIKDNKEFSDFI  342 (434)
T ss_pred             HHHhccchHHHHH
Confidence            7776666555444


No 12 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=5.7e-38  Score=291.15  Aligned_cols=293  Identities=15%  Similarity=0.087  Sum_probs=217.9

Q ss_pred             ccHHHHHHHhc--CChHHHHHHHHhcCCccccccCCCChHHHHHHHhCC--HHHHHHHHhcCCCccccCCCCCCcHHHHH
Q 048248            4 VDHKLFRALRH--GYTDKVREFARLNGNRILGTSQNGDTALHIAARFGH--EILVMEILKHQSDLVSVPNHKSETPMHVA   79 (316)
Q Consensus         4 ~~~~l~~a~~~--g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A   79 (316)
                      ..+|||.|+..  ++.+.++.|++ .|.+++..+..|.||||+|++.|+  .++|++|++.|++ ++.++..|+||||+|
T Consensus       177 G~TpLH~A~~n~~~~~eIVklLLe-~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GAD-VN~kD~~G~TPLh~A  254 (764)
T PHA02716        177 GYGILHAYLGNMYVDIDILEWLCN-NGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGD-MDMKCVNGMSPIMTY  254 (764)
T ss_pred             CCcHHHHHHHhccCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCC-CCCCCCCCCCHHHHH
Confidence            56799987644  56788866665 467899999999999999999995  5899999999987 466888999999986


Q ss_pred             HH---hCChhHHHHhhccCCCCCCC---------------C--c-------chhhhhccCCCCCcHHHHHHhc--CChhH
Q 048248           80 AR---AGNFGAAQIFMRPHGNGNNT---------------G--T-------FDDILRKRDEEGNTPLHNAVRK--CDGKM  130 (316)
Q Consensus        80 ~~---~g~~~~~~~l~~~~~~~~~~---------------~--~-------~~~~~~~~~~~g~t~L~~a~~~--~~~~~  130 (316)
                      +.   .++.++++.+++........               +  .       .+..++.+|..|+||||+|+..  ++.++
T Consensus       255 i~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eI  334 (764)
T PHA02716        255 IINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDI  334 (764)
T ss_pred             HHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchH
Confidence            42   33444444443321110000               0  0       0002345789999999998754  56789


Q ss_pred             HHHHHhhCCCcccccccccCCCCCchHHHHHHH--------------hCcHHHHHHHHHhccccccccccCCCcHHHHH-
Q 048248          131 AFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII--------------KSQFVVMAKILEAKRDLINVRDERNRNPLRYA-  195 (316)
Q Consensus       131 ~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~--------------~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A-  195 (316)
                      +++|++.|+++      +.++..|.||||+|+.              .++.++++.|+..+ ++++.+|..|.||||.+ 
T Consensus       335 VklLLe~GADI------N~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~G-ADIn~kn~~G~TPLh~y~  407 (764)
T PHA02716        335 IKLLHEYGNDL------NEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLG-ADITAVNCLGYTPLTSYI  407 (764)
T ss_pred             HHHHHHcCCCC------ccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCC-CCCCCcCCCCCChHHHHH
Confidence            99999988664      3456789999999875              36789999988765 56899999999999942 


Q ss_pred             ---HHhCcHHHHHHhhcCCCC-----------------------------------------------------------
Q 048248          196 ---AALGHFKIACRLSDEDDS-----------------------------------------------------------  213 (316)
Q Consensus       196 ---~~~g~~~~~~~ll~~~~~-----------------------------------------------------------  213 (316)
                         ...++.++++.|+..+..                                                           
T Consensus       408 ~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~  487 (764)
T PHA02716        408 CTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIER  487 (764)
T ss_pred             HHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhh
Confidence               223556777776653210                                                           


Q ss_pred             -cccccCCCCCcHHHHHHhcCCHh-----HHHHHHhhCCCCccccccCCCcHHHHHHHcCCh-----hHHHHHhcCcccc
Q 048248          214 -LVYQHDCNGQSPLHLASQNGQLS-----ILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA-----DVVVFILKQPEVE  282 (316)
Q Consensus       214 -~~~~~d~~g~tpLh~A~~~g~~~-----iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~-----~~~~~Ll~~~~~~  282 (316)
                       ..+..|..|+||||+|+..|+.+     ++++|++.+ ++++.+|..|+||||+|+++|+.     ++++.|++.++..
T Consensus       488 ~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~G-ADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~  566 (764)
T PHA02716        488 YNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQ-YNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNV  566 (764)
T ss_pred             ccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCC-CCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCc
Confidence             11334678999999999998874     459999775 55899999999999999999977     9999999876532


Q ss_pred             cccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          283 DLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       283 ~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                               +.+.|++|...++.+++.+|..++
T Consensus       567 ---------~~~~l~~~~~~~~~~~~~ll~~~~  590 (764)
T PHA02716        567 ---------DIVIIFLDKCYANGKFPSLLLSED  590 (764)
T ss_pred             ---------chHHHHHHhhhhhhHHHHHHHHcc
Confidence                     334689999999999999887654


No 13 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.1e-38  Score=287.88  Aligned_cols=279  Identities=18%  Similarity=0.164  Sum_probs=194.2

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF   85 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~   85 (316)
                      .|||.|+..|+.+.++.|+.. |.+++.++..|+||||+||..|+.+++++|+..+.....   ..+.+|++.|+..++.
T Consensus        39 tPLh~A~~~g~~e~vk~Ll~~-gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~l~~a~~~~~~  114 (477)
T PHA02878         39 IPLHQAVEARNLDVVKSLLTR-GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV---FYTLVAIKDAFNNRNV  114 (477)
T ss_pred             chHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc---ccchhhHHHHHHcCCH
Confidence            356666666666666555543 345555666666666666666666666666654432211   3455666666666666


Q ss_pred             hHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhc--CChhHHHHHHhhCCCcccccccccCCCC-CchHHHHHH
Q 048248           86 GAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRK--CDGKMAFTMIKKDPEPIRYNNKAKQGPN-NLTLLHSAI  162 (316)
Q Consensus        86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~~~~~-~~t~lh~A~  162 (316)
                      +++++|+..+.........            ..+......  ...++++.|+..++++      +..+.. |.||||+|+
T Consensus       115 ei~~~Ll~~~~~~~~~~~~------------~~~~~~~~~~~~~~~iv~~Ll~~gadi------n~~~~~~g~tpLh~A~  176 (477)
T PHA02878        115 EIFKIILTNRYKNIQTIDL------------VYIDKKSKDDIIEAEITKLLLSYGADI------NMKDRHKGNTALHYAT  176 (477)
T ss_pred             HHHHHHHhCcccCcccCcH------------HHHhhccchhhHHHHHHHHHHHcCCCC------CccCCCCCCCHHHHHH
Confidence            6666665432211100000            000000000  1123666666666544      234445 899999999


Q ss_pred             HhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc-CCHhHHHHH
Q 048248          163 IKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN-GQLSILENL  241 (316)
Q Consensus       163 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~-g~~~iv~~L  241 (316)
                      ..|+.++++.|+..+. +++.+|..|.||||+|+..|+.++++.|+..+ .+++.+|..|.||||+|+.. ++.+++++|
T Consensus       177 ~~~~~~iv~~Ll~~ga-d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g-a~in~~d~~g~TpLh~A~~~~~~~~iv~~L  254 (477)
T PHA02878        177 ENKDQRLTELLLSYGA-NVNIPDKTNNSPLHHAVKHYNKPIVHILLENG-ASTDARDKCGNTPLHISVGYCKDYDILKLL  254 (477)
T ss_pred             hCCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHhcCCHHHHHHH
Confidence            9999999999998764 58999999999999999999999999999765 45677899999999999975 799999999


Q ss_pred             HhhCCCCcccccc-CCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcC-ChhHHHHHhhc
Q 048248          242 LHSYPDSIEFIDN-KNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINN-HFNIILVLARN  314 (316)
Q Consensus       242 l~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~-~~~~~~~Ll~~  314 (316)
                      ++.+. +++.++. .|.||||+|  .++.+++++|++.+.   .++..|.+|.||||+|+..+ +.+++++|+.+
T Consensus       255 l~~ga-dvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~ga---din~~d~~g~TpL~~A~~~~~~~~~~~~li~~  323 (477)
T PHA02878        255 LEHGV-DVNAKSYILGLTALHSS--IKSERKLKLLLEYGA---DINSLNSYKLTPLSSAVKQYLCINIGRILISN  323 (477)
T ss_pred             HHcCC-CCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHHcCccchHHHHHHH
Confidence            98765 4677775 799999999  577899999999874   47888999999999999864 46788887754


No 14 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=6.9e-38  Score=263.64  Aligned_cols=231  Identities=18%  Similarity=0.160  Sum_probs=173.7

Q ss_pred             cCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhc
Q 048248           14 HGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMR   93 (316)
Q Consensus        14 ~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~   93 (316)
                      +++.+.++.|+.. +.  +..|..|+||||+|+..|+.+++++|++.++... .  .+|+||||+|+..|+.+++++|+.
T Consensus         9 ~~~~~~~~~Lis~-~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n-~--~d~~TpLh~Aa~~g~~eiV~lLL~   82 (284)
T PHA02791          9 WKSKQLKSFLSSK-DA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKN-L--LENEFPLHQAATLEDTKIVKILLF   82 (284)
T ss_pred             cCHHHHHHHHHhC-CC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCc-C--CCCCCHHHHHHHCCCHHHHHHHHH
Confidence            4555666555443 33  3567889999999999999999999998886532 2  347899999999999999999987


Q ss_pred             cCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCC-chHHHHHHHhCcHHHHHH
Q 048248           94 PHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNN-LTLLHSAIIKSQFVVMAK  172 (316)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~t~lh~A~~~~~~~~~~~  172 (316)
                      .+..          +..+|..|+||||+|+..++.++++.|+..+++..      .++..| .||||+|+..|+.+++++
T Consensus        83 ~Gad----------vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin------~~~~~g~~TpL~~Aa~~g~~eivk~  146 (284)
T PHA02791         83 SGMD----------DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM------FYGKTGWKTSFYHAVMLNDVSIVSY  146 (284)
T ss_pred             CCCC----------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC------ccCCCCCcHHHHHHHHcCCHHHHHH
Confidence            6543          33467888899999998888888888888876542      233345 488898888888888888


Q ss_pred             HHHhccccccccc-cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcH-HHHHHhcCCHhHHHHHHhhCCCCcc
Q 048248          173 ILEAKRDLINVRD-ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSP-LHLASQNGQLSILENLLHSYPDSIE  250 (316)
Q Consensus       173 ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tp-Lh~A~~~g~~~iv~~Ll~~~~~~~~  250 (316)
                      |+..++..   .| ..|.||||+|++.|+.++++.|++.++ +++.+|..|.|| ||+|+..|+.++|++|++.+ ++++
T Consensus       147 LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA-d~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~G-a~in  221 (284)
T PHA02791        147 FLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMT-STNTNNSLLFIPDIKLAIDNKDLEMLQALFKYD-INIY  221 (284)
T ss_pred             HHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCcccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCc
Confidence            88765432   23 357888888888888888888887654 456677788876 88888888888888888765 4467


Q ss_pred             ccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          251 FIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       251 ~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      .+|. +.+||      |+.|++++||+.
T Consensus       222 ~~~~-~~~~l------~~~e~~~~ll~~  242 (284)
T PHA02791        222 SVNL-ENVLL------DDAEIAKMIIEK  242 (284)
T ss_pred             cCcc-cCccC------CCHHHHHHHHHh
Confidence            7777 44666      788888888865


No 15 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.1e-37  Score=286.13  Aligned_cols=257  Identities=21%  Similarity=0.272  Sum_probs=229.1

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHH-----HHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHH
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHI-----AARFGHEILVMEILKHQSDLVSVPNHKSETPMHV   78 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~-----A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~   78 (316)
                      ..+|||.|+..|+.+.++.++.. |.+++..+..|.||||+     |+..++.+++++|++.++.. +..+..|.||||+
T Consensus        35 ~~t~L~~A~~~~~~~ivk~Ll~~-g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i-~~~d~~g~tpL~~  112 (480)
T PHA03100         35 PVLPLYLAKEARNIDVVKILLDN-GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANV-NAPDNNGITPLLY  112 (480)
T ss_pred             cchhhhhhhccCCHHHHHHHHHc-CCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCC-CCCCCCCCchhhH
Confidence            46799999999999999888865 56788888999999999     99999999999999999886 6788899999999


Q ss_pred             HH--HhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcC--ChhHHHHHHhhCCCcccccccccCCCCC
Q 048248           79 AA--RAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKC--DGKMAFTMIKKDPEPIRYNNKAKQGPNN  154 (316)
Q Consensus        79 A~--~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~  154 (316)
                      |+  ..|+.+++++|++.+..          +...+..|.||||+|+..+  +.++++.|++.++++.      ..+..|
T Consensus       113 A~~~~~~~~~iv~~Ll~~g~~----------~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din------~~d~~g  176 (480)
T PHA03100        113 AISKKSNSYSIVEYLLDNGAN----------VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN------AKNRYG  176 (480)
T ss_pred             HHhcccChHHHHHHHHHcCCC----------CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc------cccCCC
Confidence            99  99999999999987654          3346889999999999999  9999999999987652      345578


Q ss_pred             chHHHHHHHhCcHHHHHHHHHhccccccccccCC------CcHHHHHHHhCc--HHHHHHhhcCCCCcccccCCCCCcHH
Q 048248          155 LTLLHSAIIKSQFVVMAKILEAKRDLINVRDERN------RNPLRYAAALGH--FKIACRLSDEDDSLVYQHDCNGQSPL  226 (316)
Q Consensus       155 ~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g------~tpLh~A~~~g~--~~~~~~ll~~~~~~~~~~d~~g~tpL  226 (316)
                      .||||+|+..|+.++++.|+..+. +++..+..|      .||||+|+..|+  .++++.|++.+ .+++.+|..|.|||
T Consensus       177 ~tpL~~A~~~~~~~iv~~Ll~~ga-~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g-~din~~d~~g~TpL  254 (480)
T PHA03100        177 YTPLHIAVEKGNIDVIKFLLDNGA-DINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYG-VPINIKDVYGFTPL  254 (480)
T ss_pred             CCHHHHHHHhCCHHHHHHHHHcCC-CccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcC-CCCCCCCCCCCCHH
Confidence            999999999999999999998765 478888888      999999999999  99999999775 45677899999999


Q ss_pred             HHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccc
Q 048248          227 HLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEV  281 (316)
Q Consensus       227 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~  281 (316)
                      |+|+..|+.+++++|++.+. +++.+|..|.||||+|+..++.+++++|++.+..
T Consensus       255 ~~A~~~~~~~iv~~Ll~~ga-d~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~  308 (480)
T PHA03100        255 HYAVYNNNPEFVKYLLDLGA-NPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS  308 (480)
T ss_pred             HHHHHcCCHHHHHHHHHcCC-CCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence            99999999999999998876 6799999999999999999999999999998764


No 16 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=5e-37  Score=281.13  Aligned_cols=257  Identities=18%  Similarity=0.171  Sum_probs=217.3

Q ss_pred             ccHHHHHHHhcC---ChHHHHHHHHhcCCccccccCCCChHHHHHHHhC-CHHHHHHHHhcCCCccccCCCCCCcHHHHH
Q 048248            4 VDHKLFRALRHG---YTDKVREFARLNGNRILGTSQNGDTALHIAARFG-HEILVMEILKHQSDLVSVPNHKSETPMHVA   79 (316)
Q Consensus         4 ~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~-~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A   79 (316)
                      ..+|||.|+..|   +.+.++.++. .|.+++..+..|+||||+|+..| +.+++++|++.+++. +..+..|+||||+|
T Consensus        47 g~t~Lh~a~~~~~~~~~~iv~~Ll~-~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~i-n~~~~~g~tpLh~a  124 (471)
T PHA03095         47 GKTPLHLYLHYSSEKVKDIVRLLLE-AGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADV-NAKDKVGRTPLHVY  124 (471)
T ss_pred             CCCHHHHHHHhcCCChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence            468999999999   8888866664 56789999999999999999999 599999999999874 56788999999999


Q ss_pred             H--HhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcC--ChhHHHHHHhhCCCcccccccccCCCCCc
Q 048248           80 A--RAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKC--DGKMAFTMIKKDPEPIRYNNKAKQGPNNL  155 (316)
Q Consensus        80 ~--~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~~~~~~  155 (316)
                      +  ..++.+++++|++.+++.          ...|..|.||||+|+..+  +.++++.|+..+++...      .+..|.
T Consensus       125 ~~~~~~~~~iv~~Ll~~gad~----------~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~------~d~~g~  188 (471)
T PHA03095        125 LSGFNINPKVIRLLLRKGADV----------NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYA------VDDRFR  188 (471)
T ss_pred             hhCCcCCHHHHHHHHHcCCCC----------CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcc------cCCCCC
Confidence            9  556789999999876543          346889999999998876  56889999998876532      356789


Q ss_pred             hHHHHHHHh--CcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcH--HHHHHhhcCCCCcccccCCCCCcHHHHHHh
Q 048248          156 TLLHSAIIK--SQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHF--KIACRLSDEDDSLVYQHDCNGQSPLHLASQ  231 (316)
Q Consensus       156 t~lh~A~~~--~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~--~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~  231 (316)
                      ||||+++..  +...+++.|+..+ .+++.+|..|.||||+|+..|..  .++..|+. .+.+++.+|..|+||||+|+.
T Consensus       189 t~Lh~~~~~~~~~~~i~~~Ll~~g-~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~-~g~din~~d~~g~TpLh~A~~  266 (471)
T PHA03095        189 SLLHHHLQSFKPRARIVRELIRAG-CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLI-AGISINARNRYGQTPLHYAAV  266 (471)
T ss_pred             CHHHHHHHHCCCcHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence            999999865  6677888887765 45899999999999999998875  35555554 456678889999999999999


Q ss_pred             cCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccc
Q 048248          232 NGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEV  281 (316)
Q Consensus       232 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~  281 (316)
                      .|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++..|++.+..
T Consensus       267 ~~~~~~v~~LL~~g-ad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~  315 (471)
T PHA03095        267 FNNPRACRRLIALG-ADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPS  315 (471)
T ss_pred             cCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence            99999999999875 45799999999999999999999999999987543


No 17 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.8e-37  Score=275.48  Aligned_cols=244  Identities=20%  Similarity=0.239  Sum_probs=137.5

Q ss_pred             CChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCc
Q 048248           38 GDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNT  117 (316)
Q Consensus        38 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t  117 (316)
                      .+++||.|+..|+.+++++|++.|.+. +..+.+|.||||+|+..|+.+++++|++.++..          ...+.++.|
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~-n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~----------~~~~~~~~t   70 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINP-NFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP----------DVKYPDIES   70 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc----------cccCCCccc
Confidence            345566666666666666666555442 234445566666666666666666665543321          112345556


Q ss_pred             HHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHH
Q 048248          118 PLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAA  197 (316)
Q Consensus       118 ~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~  197 (316)
                      |||.|+..|+.++++.|+..+.....     ..+..|.||||+|+..|+.++++.|+..+. +++.++..|.||||+|+.
T Consensus        71 ~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~g~tpL~~A~~~~~~~iv~~Ll~~ga-d~~~~~~~g~tpLh~A~~  144 (413)
T PHA02875         71 ELHDAVEEGDVKAVEELLDLGKFADD-----VFYKDGMTPLHLATILKKLDIMKLLIARGA-DPDIPNTDKFSPLHLAVM  144 (413)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccc-----cccCCCCCHHHHHHHhCCHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHH
Confidence            66666666666666666655433211     122345666666666666666666665543 356666666666666666


Q ss_pred             hCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCC-CcHHHHHHHcCChhHHHHHh
Q 048248          198 LGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKN-RNILHLAAQNGHADVVVFIL  276 (316)
Q Consensus       198 ~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~~~~~Ll  276 (316)
                      .|+.++++.|+..+. +++.+|..|+||||+|+..|+.+++++|++.+.. ++..+..| .||+|+|+..|+.+++++|+
T Consensus       145 ~~~~~~v~~Ll~~g~-~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~-~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll  222 (413)
T PHA02875        145 MGDIKGIELLIDHKA-CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGAN-IDYFGKNGCVAALCYAIENNKIDIVRLFI  222 (413)
T ss_pred             cCCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-CCcCCCCCCchHHHHHHHcCCHHHHHHHH
Confidence            666666666665433 3445566666666666666666666666655433 45555554 35666666666666666666


Q ss_pred             cCcccccccccCCCCCCcHHHHHH
Q 048248          277 KQPEVEDLINSSDVDGNTPLHLAA  300 (316)
Q Consensus       277 ~~~~~~~~~~~~d~~g~t~L~~A~  300 (316)
                      +.|.........+..+.||+++++
T Consensus       223 ~~gad~n~~~~~~~~~~t~l~~~~  246 (413)
T PHA02875        223 KRGADCNIMFMIEGEECTILDMIC  246 (413)
T ss_pred             HCCcCcchHhhcCCCchHHHHHHH
Confidence            665443333334555666666554


No 18 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.6e-36  Score=278.24  Aligned_cols=279  Identities=15%  Similarity=0.148  Sum_probs=226.4

Q ss_pred             HHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHh--CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC-----
Q 048248           11 ALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARF--GHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG-----   83 (316)
Q Consensus        11 a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g-----   83 (316)
                      .+...+.+.++.|+.. |.+++.. ..|.||||+++..  ++.++|++|++.|++.. ..+ .+.||||.|+..+     
T Consensus        10 ~~~~~~~~~v~~LL~~-GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn-~~~-~~~tpL~~a~~~~~~~~~   85 (494)
T PHA02989         10 YSDTVDKNALEFLLRT-GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVN-YKG-YIETPLCAVLRNREITSN   85 (494)
T ss_pred             cCCcCcHHHHHHHHHc-CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCcc-CCC-CCCCcHHHHHhccCcchh
Confidence            4456889999877755 5778877 6799999876554  36899999999998753 344 5799999998754     


Q ss_pred             -ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhc---CChhHHHHHHhhCCCcccccccccCCCCCchHHH
Q 048248           84 -NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRK---CDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLH  159 (316)
Q Consensus        84 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh  159 (316)
                       ..+++++|++.+++          ++.+|..|.||||+|+..   ++.++++.|++.|+++.     ...+..|.||||
T Consensus        86 ~~~~iv~~Ll~~Gad----------in~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin-----~~~d~~g~tpLh  150 (494)
T PHA02989         86 KIKKIVKLLLKFGAD----------INLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN-----DVKNSRGYNLLH  150 (494)
T ss_pred             hHHHHHHHHHHCCCC----------CCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc-----cccCCCCCCHHH
Confidence             46799999988765          344688999999988765   57899999999987752     234668999999


Q ss_pred             HHHHh--CcHHHHHHHHHhccccccc-cccCCCcHHHHHHHhC----cHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248          160 SAIIK--SQFVVMAKILEAKRDLINV-RDERNRNPLRYAAALG----HFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN  232 (316)
Q Consensus       160 ~A~~~--~~~~~~~~ll~~~~~~~~~-~d~~g~tpLh~A~~~g----~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~  232 (316)
                      +|+..  ++.++++.|++.+.+ ++. .+..|.||||+|+..+    +.++++.|++.+. +++.+|..|.||||.++..
T Consensus       151 ~a~~~~~~~~~iv~~Ll~~Gad-i~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga-~vn~~~~~~~t~l~~~~~~  228 (494)
T PHA02989        151 MYLESFSVKKDVIKILLSFGVN-LFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGV-NIETNNNGSESVLESFLDN  228 (494)
T ss_pred             HHHHhccCCHHHHHHHHHcCCC-ccccccccCCChHHHHHhcccccccHHHHHHHHhCCC-CccccCCccccHHHHHHHh
Confidence            98754  578999999987754 566 6789999999998764    7899999997765 4566788899999987654


Q ss_pred             C------CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChh
Q 048248          233 G------QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFN  306 (316)
Q Consensus       233 g------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~  306 (316)
                      +      ..+++++|+. + .+++.+|..|+||||+|+..|+.+++++|++.|.   .++.+|..|.||||+|++.++.+
T Consensus       229 ~~~~~~~~~~il~~l~~-~-advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga---din~~d~~G~TpL~~A~~~~~~~  303 (494)
T PHA02989        229 NKILSKKEFKVLNFILK-Y-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGD---DIYNVSKDGDTVLTYAIKHGNID  303 (494)
T ss_pred             chhhcccchHHHHHHHh-C-CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCC---CccccCCCCCCHHHHHHHcCCHH
Confidence            3      4677887664 4 6689999999999999999999999999999875   47889999999999999999999


Q ss_pred             HHHHHhhcC
Q 048248          307 IILVLARNM  315 (316)
Q Consensus       307 ~~~~Ll~~~  315 (316)
                      +++.|+++.
T Consensus       304 iv~~LL~~~  312 (494)
T PHA02989        304 MLNRILQLK  312 (494)
T ss_pred             HHHHHHhcC
Confidence            999999864


No 19 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1e-36  Score=256.56  Aligned_cols=231  Identities=16%  Similarity=0.118  Sum_probs=196.7

Q ss_pred             hCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCC
Q 048248           48 FGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCD  127 (316)
Q Consensus        48 ~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~  127 (316)
                      .+..+++++|++.++.   ..|.+|+||||+|+..|+.+++++|+..++..+          .  .+|+||||+|+..++
T Consensus         9 ~~~~~~~~~Lis~~a~---~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n----------~--~d~~TpLh~Aa~~g~   73 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF---KADVHGHSALYYAIADNNVRLVCTLLNAGALKN----------L--LENEFPLHQAATLED   73 (284)
T ss_pred             cCHHHHHHHHHhCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCc----------C--CCCCCHHHHHHHCCC
Confidence            4567889999997764   468899999999999999999999998764422          1  247899999999999


Q ss_pred             hhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCC-cHHHHHHHhCcHHHHHH
Q 048248          128 GKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNR-NPLRYAAALGHFKIACR  206 (316)
Q Consensus       128 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~-tpLh~A~~~g~~~~~~~  206 (316)
                      .++++.|+..+..+      +.++..|.||||+|+..|+.++++.|+..+. +++.++..|+ ||||+|+..|+.++++.
T Consensus        74 ~eiV~lLL~~Gadv------n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga-din~~~~~g~~TpL~~Aa~~g~~eivk~  146 (284)
T PHA02791         74 TKIVKILLFSGMDD------SQFDDKGNTALYYAVDSGNMQTVKLFVKKNW-RLMFYGKTGWKTSFYHAVMLNDVSIVSY  146 (284)
T ss_pred             HHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CcCccCCCCCcHHHHHHHHcCCHHHHHH
Confidence            99999999987654      3356789999999999999999999987764 4788888885 89999999999999999


Q ss_pred             hhcCCCCcccccC-CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcH-HHHHHHcCChhHHHHHhcCcccccc
Q 048248          207 LSDEDDSLVYQHD-CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNI-LHLAAQNGHADVVVFILKQPEVEDL  284 (316)
Q Consensus       207 ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp-Lh~A~~~g~~~~~~~Ll~~~~~~~~  284 (316)
                      |+..++..   .| ..|.||||+|+..|+.+++++|++.++ +++.+|..|.|| ||+|+..|+.+++++|++.+.   .
T Consensus       147 LL~~~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gA-d~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga---~  219 (284)
T PHA02791        147 FLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYMT-STNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDI---N  219 (284)
T ss_pred             HHhcCCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCC---C
Confidence            99876543   23 358999999999999999999998764 578999999987 999999999999999999874   3


Q ss_pred             cccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248          285 INSSDVDGNTPLHLAAINNHFNIILVLARN  314 (316)
Q Consensus       285 ~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~  314 (316)
                      ++.+|. +.|||      ++.|++++||++
T Consensus       220 in~~~~-~~~~l------~~~e~~~~ll~~  242 (284)
T PHA02791        220 IYSVNL-ENVLL------DDAEIAKMIIEK  242 (284)
T ss_pred             CccCcc-cCccC------CCHHHHHHHHHh
Confidence            688888 44888      788999999986


No 20 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.2e-36  Score=275.43  Aligned_cols=281  Identities=17%  Similarity=0.180  Sum_probs=219.2

Q ss_pred             HHHHHHhcCChHHHHHHHHhc---CCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248            7 KLFRALRHGYTDKVREFARLN---GNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG   83 (316)
Q Consensus         7 ~l~~a~~~g~~~~~~~ll~~~---~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g   83 (316)
                      .|+.+......+.+...+..-   +...+.....+.||||+|++.|+.++|++|++.|++. +..+.+|+||||+|+..|
T Consensus         3 ~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadv-n~~d~~g~TpLh~A~~~g   81 (477)
T PHA02878          3 KLYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHNV-NQPDHRDLTPLHIICKEP   81 (477)
T ss_pred             hHHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCc
Confidence            467777777766665655542   2222334557899999999999999999999998764 568889999999999999


Q ss_pred             ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH
Q 048248           84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII  163 (316)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~  163 (316)
                      +.+.++.|+.......            -..+.+|++.|+..++.++++.|+..+......        .....+.....
T Consensus        82 ~~~~v~~Ll~~~~~~~------------~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~--------~~~~~~~~~~~  141 (477)
T PHA02878         82 NKLGMKEMIRSINKCS------------VFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQT--------IDLVYIDKKSK  141 (477)
T ss_pred             cHhHHHHHHHHHhccc------------cccchhhHHHHHHcCCHHHHHHHHhCcccCccc--------CcHHHHhhccc
Confidence            9999999997542211            145778999999999999999999864322110        00111111111


Q ss_pred             h--CcHHHHHHHHHhccccccccccC-CCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHH
Q 048248          164 K--SQFVVMAKILEAKRDLINVRDER-NRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILEN  240 (316)
Q Consensus       164 ~--~~~~~~~~ll~~~~~~~~~~d~~-g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~  240 (316)
                      .  ...++++.|+..+ .+++.++.. |.||||+|+..|+.++++.|+..++ +++..|..|+||||.|+..|+.+++++
T Consensus       142 ~~~~~~~iv~~Ll~~g-adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~ga-d~n~~d~~g~tpLh~A~~~~~~~iv~~  219 (477)
T PHA02878        142 DDIIEAEITKLLLSYG-ADINMKDRHKGNTALHYATENKDQRLTELLLSYGA-NVNIPDKTNNSPLHHAVKHYNKPIVHI  219 (477)
T ss_pred             hhhHHHHHHHHHHHcC-CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHhCCHHHHHH
Confidence            1  1235788877765 458999988 9999999999999999999997654 567789999999999999999999999


Q ss_pred             HHhhCCCCccccccCCCcHHHHHHHc-CChhHHHHHhcCcccccccccCCC-CCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248          241 LLHSYPDSIEFIDNKNRNILHLAAQN-GHADVVVFILKQPEVEDLINSSDV-DGNTPLHLAAINNHFNIILVLARNMS  316 (316)
Q Consensus       241 Ll~~~~~~~~~~d~~g~tpLh~A~~~-g~~~~~~~Ll~~~~~~~~~~~~d~-~g~t~L~~A~~~~~~~~~~~Ll~~~~  316 (316)
                      |++.+ .+++.+|..|+||||+|+.. ++.+++++|++.+.   .++.++. .|.||||+|  .++.+++++|++.++
T Consensus       220 Ll~~g-a~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~ga---dvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~ga  291 (477)
T PHA02878        220 LLENG-ASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGV---DVNAKSYILGLTALHSS--IKSERKLKLLLEYGA  291 (477)
T ss_pred             HHHcC-CCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCC---CCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCC
Confidence            99876 45799999999999999976 78999999999875   3566664 799999999  578899999998864


No 21 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=4e-37  Score=229.40  Aligned_cols=218  Identities=22%  Similarity=0.291  Sum_probs=180.7

Q ss_pred             CCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhc-cCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccC
Q 048248           72 SETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRK-RDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQ  150 (316)
Q Consensus        72 g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~  150 (316)
                      +.++.+.+++...+..++.++.+..         ..++. .|.+|+||||+|++.|+.+++.+|+... .+    ..+.+
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~---------kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~-nv----~~ddk   68 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDP---------KSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQP-NV----KPDDK   68 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcCh---------hhhhccccccCCceeeeeeecCchhHHHHHHhcC-CC----CCCCc
Confidence            4677788888777777777775421         12333 4559999999999999999999999732 21    12345


Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  230 (316)
                      |..|+||||+|+..|+.++|+.|+.+.+.++|..++.|.|+||||+..|.++++..|+..+ +.+..+|+.|.||||-|+
T Consensus        69 DdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~g-a~i~~kD~~~qtplHRAA  147 (226)
T KOG4412|consen   69 DDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKG-ALIRIKDKQGQTPLHRAA  147 (226)
T ss_pred             cccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcC-CCCcccccccCchhHHHH
Confidence            7789999999999999999999999977789999999999999999999999999888776 567789999999999999


Q ss_pred             hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHH
Q 048248          231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIIL  309 (316)
Q Consensus       231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~  309 (316)
                      ..|+.+++++|+..+ +.+|..|+.|+||||.|.-.|+.++..+|++.+.   .++..|++| ||+-.|+-.=...+.+
T Consensus       148 avGklkvie~Li~~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gA---d~~~edke~-t~~~~a~~~l~~alk~  221 (226)
T KOG4412|consen  148 AVGKLKVIEYLISQG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGA---DTDREDKEG-TALRIACNELLEALKE  221 (226)
T ss_pred             hccchhhHHHHHhcC-CCCCcccccCccHHHHHHhccCchHHHHHHHhcc---ceeeccccC-chHHHHHHHHHHHHHH
Confidence            999999999999876 6679999999999999988899999999999874   356778888 9988886544433333


No 22 
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=3.3e-37  Score=229.85  Aligned_cols=207  Identities=24%  Similarity=0.301  Sum_probs=123.1

Q ss_pred             HHHHHHhcCChHHHHHHHHhcCCccccc-cCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh
Q 048248            7 KLFRALRHGYTDKVREFARLNGNRILGT-SQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF   85 (316)
Q Consensus         7 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~   85 (316)
                      +.+..+.......+++++...+..++.+ |++|+||||+||++|+.++|.+|++...-.++-.|..||||||+|+..|+.
T Consensus         6 ~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~   85 (226)
T KOG4412|consen    6 LGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGND   85 (226)
T ss_pred             hHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcH
Confidence            4455555556666666665555444443 336666666666666666666666422222222344566666666666655


Q ss_pred             hHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC
Q 048248           86 GAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS  165 (316)
Q Consensus        86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~  165 (316)
                      ++++.|+...                                          ++++      +..+..|.||||+|+.+|
T Consensus        86 evVk~Ll~r~------------------------------------------~adv------na~tn~G~T~LHyAagK~  117 (226)
T KOG4412|consen   86 EVVKELLNRS------------------------------------------GADV------NATTNGGQTCLHYAAGKG  117 (226)
T ss_pred             HHHHHHhcCC------------------------------------------CCCc------ceecCCCcceehhhhcCC
Confidence            5555555431                                          2221      122335666666666666


Q ss_pred             cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhC
Q 048248          166 QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSY  245 (316)
Q Consensus       166 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~  245 (316)
                      .+++++.|++.+ +.++.+|..|.||||.|+..|..+++++|+..+ +..+..|+.|+||||.|...|+.++...|+..+
T Consensus       118 r~eIaqlLle~g-a~i~~kD~~~qtplHRAAavGklkvie~Li~~~-a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~g  195 (226)
T KOG4412|consen  118 RLEIAQLLLEKG-ALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG-APLNTQDKYGFTPLHHALAEGHPDVAVLLVRAG  195 (226)
T ss_pred             hhhHHHHHHhcC-CCCcccccccCchhHHHHhccchhhHHHHHhcC-CCCCcccccCccHHHHHHhccCchHHHHHHHhc
Confidence            667666666555 446677777777777777777777777776655 334556777777777776666777766666665


Q ss_pred             CCCccccccCCCcHHHHHHH
Q 048248          246 PDSIEFIDNKNRNILHLAAQ  265 (316)
Q Consensus       246 ~~~~~~~d~~g~tpLh~A~~  265 (316)
                       ++++..|+.| ||+..|+.
T Consensus       196 -Ad~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  196 -ADTDREDKEG-TALRIACN  213 (226)
T ss_pred             -cceeeccccC-chHHHHHH
Confidence             4456666666 77666554


No 23 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.1e-35  Score=267.43  Aligned_cols=132  Identities=9%  Similarity=0.012  Sum_probs=93.5

Q ss_pred             ccHHHHHHHhcC---ChHHHHHHHHhcCCccccccCCCChHHHHHHHhC--CHHHHHHHHhcCCCc-cccCCCCCCcHHH
Q 048248            4 VDHKLFRALRHG---YTDKVREFARLNGNRILGTSQNGDTALHIAARFG--HEILVMEILKHQSDL-VSVPNHKSETPMH   77 (316)
Q Consensus         4 ~~~~l~~a~~~g---~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~--~~~~v~~Ll~~~~~~-~~~~~~~g~tpLh   77 (316)
                      ..+|||.|+..|   +.+.++.|+ ..|++++.++..|+||||+|+..+  +.++|++|++.+++. ....++.+.+|||
T Consensus        41 G~TaLh~A~~~~~~~~~eivklLL-s~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~  119 (672)
T PHA02730         41 GNNALHCYVSNKCDTDIKIVRLLL-SRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLY  119 (672)
T ss_pred             CCcHHHHHHHcCCcCcHHHHHHHH-hCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHH
Confidence            468999999997   488886666 567889999999999999999977  799999999987542 2335666899999


Q ss_pred             HHHH--hCChhHHHHhhccCCCCCCCCcchhhhhccC-CCCCcHHHHHHhcCChhHHHHHHhhCCCc
Q 048248           78 VAAR--AGNFGAAQIFMRPHGNGNNTGTFDDILRKRD-EEGNTPLHNAVRKCDGKMAFTMIKKDPEP  141 (316)
Q Consensus        78 ~A~~--~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~g~t~L~~a~~~~~~~~~~~ll~~~~~~  141 (316)
                      .++.  .++.+++++|+..++...+..     .+..+ ..|.+|++++...++.++++.|++.|+.+
T Consensus       120 ~y~~s~n~~~~~vk~Li~~~~~~~~~~-----~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v  181 (672)
T PHA02730        120 SYMSSDNIDLRLLKYLIVDKRIRPSKN-----TNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYS  181 (672)
T ss_pred             HHHHhcCCcHHHHHHHHHhcCCChhhh-----hhhhccccchhhhhHhcCCCchHHHHHHHHcCCcc
Confidence            9888  888999999996443221100     00011 24555666665555566666666555544


No 24 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.7e-35  Score=262.55  Aligned_cols=252  Identities=19%  Similarity=0.247  Sum_probs=210.9

Q ss_pred             cHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC
Q 048248            5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      ..+|+.|+..|+.+.++.|+.. |.+++..+..|.||||+|+..|+.+++++|++.++.. ...+.++.||||.|+..|+
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~-g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~~t~L~~A~~~g~   80 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDI-GINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDIESELHDAVEEGD   80 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCc-cccCCCcccHHHHHHHCCC
Confidence            4689999999999999888865 5677888889999999999999999999999998763 4566789999999999999


Q ss_pred             hhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHh
Q 048248           85 FGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIK  164 (316)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~  164 (316)
                      .+++++|++.+....         ...+.+|+||||+|+..++.++++.|++.|+++.      ..+..|.||||+|+..
T Consensus        81 ~~~v~~Ll~~~~~~~---------~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~------~~~~~g~tpLh~A~~~  145 (413)
T PHA02875         81 VKAVEELLDLGKFAD---------DVFYKDGMTPLHLATILKKLDIMKLLIARGADPD------IPNTDKFSPLHLAVMM  145 (413)
T ss_pred             HHHHHHHHHcCCccc---------ccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC------CCCCCCCCHHHHHHHc
Confidence            999999998754322         2246689999999999999999999999987652      3456789999999999


Q ss_pred             CcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCC-CcHHHHHHhcCCHhHHHHHHh
Q 048248          165 SQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNG-QSPLHLASQNGQLSILENLLH  243 (316)
Q Consensus       165 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~iv~~Ll~  243 (316)
                      |+.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|++.++.. +..+..| .||+|+|+..|+.+++++|++
T Consensus       146 ~~~~~v~~Ll~~g~-~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~-n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~  223 (413)
T PHA02875        146 GDIKGIELLIDHKA-CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI-DYFGKNGCVAALCYAIENNKIDIVRLFIK  223 (413)
T ss_pred             CCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CcCCCCCCchHHHHHHHcCCHHHHHHHHH
Confidence            99999999997765 58999999999999999999999999999877654 4556655 589999999999999999999


Q ss_pred             hCCCCccc---cccCCCcHHHHHHHc---CChhHHHHHh
Q 048248          244 SYPDSIEF---IDNKNRNILHLAAQN---GHADVVVFIL  276 (316)
Q Consensus       244 ~~~~~~~~---~d~~g~tpLh~A~~~---g~~~~~~~Ll  276 (316)
                      .+++ ++.   .+..+.|||++.+..   ...+++..++
T Consensus       224 ~gad-~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li  261 (413)
T PHA02875        224 RGAD-CNIMFMIEGEECTILDMICNMCTNLESEAIDALI  261 (413)
T ss_pred             CCcC-cchHhhcCCCchHHHHHHHhhcCCcccHHHHHHH
Confidence            8755 344   467899999988754   3345554444


No 25 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.3e-34  Score=266.57  Aligned_cols=287  Identities=12%  Similarity=0.083  Sum_probs=206.6

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHH--HhCCHHHHHHHHhcCCCccccCC---CCC--------
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAA--RFGHEILVMEILKHQSDLVSVPN---HKS--------   72 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~--~~~~~~~v~~Ll~~~~~~~~~~~---~~g--------   72 (316)
                      .+++.|+..|+.+.++.|+.. |.+++..+.+|+||||+|+  ..|+.++|++|++.|++.. ..|   ..|        
T Consensus       105 ~~~~~a~~~~~~e~vk~Ll~~-Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn-~~d~~~~~g~~~~~~~~  182 (661)
T PHA02917        105 IFSYMKSKNVDVDLIKVLVEH-GFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL-YEDEDDEYGYAYDDYQP  182 (661)
T ss_pred             hHHHHHhhcCCHHHHHHHHHc-CCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc-ccccccccccccccccc
Confidence            566778888899999777644 6889999999999999654  5689999999999998753 222   223        


Q ss_pred             ---CcHHHHHHH-----------hCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCCh--hHHHHHHh
Q 048248           73 ---ETPMHVAAR-----------AGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDG--KMAFTMIK  136 (316)
Q Consensus        73 ---~tpLh~A~~-----------~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~--~~~~~ll~  136 (316)
                         .||||+|+.           .++.+++++|+..+++          ++.+|.+|+||||+|+..++.  ++++.|+.
T Consensus       183 ~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gad----------vn~~d~~G~TpLh~A~~~g~~~~eivk~Li~  252 (661)
T PHA02917        183 RNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIK----------PSSIDKNYCTALQYYIKSSHIDIDIVKLLMK  252 (661)
T ss_pred             cccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCC----------cccCCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence               599999986           4588999999988765          345689999999999999885  68888875


Q ss_pred             hCCCcccccccccCCCCCchHHHHHHHhC---------cHHHHHHHHHhccc----------------------------
Q 048248          137 KDPEPIRYNNKAKQGPNNLTLLHSAIIKS---------QFVVMAKILEAKRD----------------------------  179 (316)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~t~lh~A~~~~---------~~~~~~~ll~~~~~----------------------------  179 (316)
                       +.+....  ....+..+.+|+|+|+..+         +.++++.||+.+.+                            
T Consensus       253 -g~d~~~~--~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (661)
T PHA02917        253 -GIDNTAY--SYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSD  329 (661)
T ss_pred             -CCccccc--ccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchH
Confidence             5443221  1123444555666665311         44555555554422                            


Q ss_pred             ----------------------------cccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHh
Q 048248          180 ----------------------------LINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQ  231 (316)
Q Consensus       180 ----------------------------~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~  231 (316)
                                                  +++.++..|.|+.    .....++++.|+...+++...++.+|+||||.|++
T Consensus       330 ~~~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~  405 (661)
T PHA02917        330 VLQHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCK  405 (661)
T ss_pred             HHHHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHH
Confidence                                        2333333333322    11223345555554444434456679999999875


Q ss_pred             cC-----------------------CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccC
Q 048248          232 NG-----------------------QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSS  288 (316)
Q Consensus       232 ~g-----------------------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~  288 (316)
                      ++                       ..+++++|+..+ ++++.+|..|+||||+|+..++.+++++|++.+.   .++.+
T Consensus       406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~G-AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GA---din~~  481 (661)
T PHA02917        406 SNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYL-KDINMIDKRGETLLHKAVRYNKQSLVSLLLESGS---DVNIR  481 (661)
T ss_pred             hcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcC---CCCCC
Confidence            43                       356789999876 4579999999999999999999999999999874   47889


Q ss_pred             CCCCCcHHHHHHH-cCChhHHHHHhhcC
Q 048248          289 DVDGNTPLHLAAI-NNHFNIILVLARNM  315 (316)
Q Consensus       289 d~~g~t~L~~A~~-~~~~~~~~~Ll~~~  315 (316)
                      |..|.||||+|+. .++.+++++|+..+
T Consensus       482 d~~G~T~L~~A~~~~~~~~iv~~LL~~g  509 (661)
T PHA02917        482 SNNGYTCIAIAINESRNIELLKMLLCHK  509 (661)
T ss_pred             CCCCCCHHHHHHHhCCCHHHHHHHHHcC
Confidence            9999999999996 68899999999765


No 26 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=7.4e-34  Score=264.99  Aligned_cols=294  Identities=16%  Similarity=0.097  Sum_probs=194.6

Q ss_pred             ccHHHHHHHhc---CChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHH----HHHHHHhcCCCccccCCCCCCcHH
Q 048248            4 VDHKLFRALRH---GYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEI----LVMEILKHQSDLVSVPNHKSETPM   76 (316)
Q Consensus         4 ~~~~l~~a~~~---g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~g~tpL   76 (316)
                      ..+|||.|+..   |+.+.++.|+. .|.+++..+..|+||||+|+..|+.+    +++.|+..++. .+..+  ..+++
T Consensus        32 g~t~Lh~a~~~~~~~~~~~v~~Ll~-~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-~n~~~--~~~~~  107 (661)
T PHA02917         32 KNNALHAYLFNEHCNNVEVVKLLLD-SGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-SNIND--FNIFS  107 (661)
T ss_pred             CCcHHHHHHHhhhcCcHHHHHHHHH-CCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-CCCCC--cchHH
Confidence            35678875444   77788866664 45666777777888888888777743    44555554332 12221  23556


Q ss_pred             HHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHH--hcCChhHHHHHHhhCCCcccccccc------
Q 048248           77 HVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAV--RKCDGKMAFTMIKKDPEPIRYNNKA------  148 (316)
Q Consensus        77 h~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~--~~~~~~~~~~ll~~~~~~~~~~~~~------  148 (316)
                      |+|+..++.+++++|+..+++          ++.+|.+|+||||+++  ..++.++++.|++.|+++.......      
T Consensus       108 ~~a~~~~~~e~vk~Ll~~Gad----------in~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~  177 (661)
T PHA02917        108 YMKSKNVDVDLIKVLVEHGFD----------LSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAY  177 (661)
T ss_pred             HHHhhcCCHHHHHHHHHcCCC----------CCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccc
Confidence            667777777777777766544          3346788999998654  4578899999999887663211100      


Q ss_pred             --cCCCCCchHHHHHHH-----------hCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcH--HHHHHhhcCCCC
Q 048248          149 --KQGPNNLTLLHSAII-----------KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHF--KIACRLSDEDDS  213 (316)
Q Consensus       149 --~~~~~~~t~lh~A~~-----------~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~--~~~~~ll~~~~~  213 (316)
                        .+...+.||||+|+.           .++.++++.|+..+ ++++.+|.+|.||||+|++.|+.  ++++.|++ ++.
T Consensus       178 ~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~G-advn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d  255 (661)
T PHA02917        178 DDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHG-IKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GID  255 (661)
T ss_pred             ccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCC-CCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCc
Confidence              112234699999875           35778888888766 45888999999999999998875  67777764 332


Q ss_pred             cc---cccCCCCCcHHHHHH------------------------------------------------------------
Q 048248          214 LV---YQHDCNGQSPLHLAS------------------------------------------------------------  230 (316)
Q Consensus       214 ~~---~~~d~~g~tpLh~A~------------------------------------------------------------  230 (316)
                      ..   ...|..|.||+|+|+                                                            
T Consensus       256 ~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  335 (661)
T PHA02917        256 NTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHIL  335 (661)
T ss_pred             ccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHH
Confidence            21   112333344444443                                                            


Q ss_pred             ----hcCC--HhHHHHHHhhCC-----------------------------CCccccccCCCcHHHHHHHcC--------
Q 048248          231 ----QNGQ--LSILENLLHSYP-----------------------------DSIEFIDNKNRNILHLAAQNG--------  267 (316)
Q Consensus       231 ----~~g~--~~iv~~Ll~~~~-----------------------------~~~~~~d~~g~tpLh~A~~~g--------  267 (316)
                          ..|.  .+++++|++.|+                             +.++.++.+|+||||.|++.+        
T Consensus       336 ~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~  415 (661)
T PHA02917        336 IEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYT  415 (661)
T ss_pred             HHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhh
Confidence                2332  236666665532                             222344567999999998543        


Q ss_pred             ---------------ChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248          268 ---------------HADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS  316 (316)
Q Consensus       268 ---------------~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~  316 (316)
                                     ..+++++|++.+.   .++.+|..|+||||+|+..++.+++++|++.++
T Consensus       416 ~~~~~~~~~~~~~~~~~~~v~~Ll~~GA---dIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GA  476 (661)
T PHA02917        416 YTYKKGLCDMSYACPILSTINICLPYLK---DINMIDKRGETLLHKAVRYNKQSLVSLLLESGS  476 (661)
T ss_pred             hhhhhccchhhhhhhhHHHHHHHHHCCC---CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcC
Confidence                           2467789998874   478899999999999999999999999998763


No 27 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.7e-34  Score=263.26  Aligned_cols=273  Identities=15%  Similarity=0.160  Sum_probs=217.3

Q ss_pred             ChHHHHHHHHhcCCccccccCCCChHHHHHHH--hCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh-----CChhHH
Q 048248           16 YTDKVREFARLNGNRILGTSQNGDTALHIAAR--FGHEILVMEILKHQSDLVSVPNHKSETPMHVAARA-----GNFGAA   88 (316)
Q Consensus        16 ~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~--~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~-----g~~~~~   88 (316)
                      ..+.|+.++.. +. ++.. ..|.|+++....  .++.++|++|++.|++. +..+..|.||||.|+..     +..+++
T Consensus        17 ~~~~v~~ll~~-~~-~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpL~~~~~n~~~~~~~~~iv   92 (489)
T PHA02798         17 KLSTVKLLIKS-CN-PNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANV-NGLDNEYSTPLCTILSNIKDYKHMLDIV   92 (489)
T ss_pred             cHHHHHHHHhc-CC-hhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCC-CCCCCCCCChHHHHHHhHHhHHhHHHHH
Confidence            45678777743 33 3333 457787764443  34789999999999874 56778999999998864     668999


Q ss_pred             HHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcC---ChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC
Q 048248           89 QIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKC---DGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS  165 (316)
Q Consensus        89 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~---~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~  165 (316)
                      ++|++.+++          ++.+|..|+||||+|+..+   +.++++.|++.|+++      +..+..|.||||+|+..+
T Consensus        93 ~~Ll~~Gad----------iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadv------n~~d~~g~tpL~~a~~~~  156 (489)
T PHA02798         93 KILIENGAD----------INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADT------TLLDKDGFTMLQVYLQSN  156 (489)
T ss_pred             HHHHHCCCC----------CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCc------cccCCCCCcHHHHHHHcC
Confidence            999987655          3456889999999999875   678999999988765      345678999999999988


Q ss_pred             c---HHHHHHHHHhccccccccc-cCCCcHHHHHHHh----CcHHHHHHhhcCCCCcccccCCCCCcHHH-------HHH
Q 048248          166 Q---FVVMAKILEAKRDLINVRD-ERNRNPLRYAAAL----GHFKIACRLSDEDDSLVYQHDCNGQSPLH-------LAS  230 (316)
Q Consensus       166 ~---~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~----g~~~~~~~ll~~~~~~~~~~d~~g~tpLh-------~A~  230 (316)
                      +   .++++.|++.+. +++.++ ..|.||||.++..    ++.++++.|++.+. +++..+..|.|+++       .+.
T Consensus       157 ~~~~~~vv~~Ll~~ga-din~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga-~i~~~~~~~~~~~~~~l~~l~~~~  234 (489)
T PHA02798        157 HHIDIEIIKLLLEKGV-DINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGF-IINKENKSHKKKFMEYLNSLLYDN  234 (489)
T ss_pred             CcchHHHHHHHHHhCC-CcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCC-CcccCCccccchHHHHHHHHHhhc
Confidence            7   899999888764 467664 5799999998764    36788888887654 45667788888877       245


Q ss_pred             hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 048248          231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILV  310 (316)
Q Consensus       231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~  310 (316)
                      ..++.+++.+|+. + .+++.+|..|+||||+|+.+|+.+++++|++.|.   .++.+|..|+||||+|+.+++.++++.
T Consensus       235 ~~~~~~i~~~l~~-~-~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GA---din~~d~~G~TpL~~A~~~~~~~iv~~  309 (489)
T PHA02798        235 KRFKKNILDFIFS-Y-IDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGG---DINIITELGNTCLFTAFENESKFIFNS  309 (489)
T ss_pred             ccchHHHHHHHHh-c-CCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCC---cccccCCCCCcHHHHHHHcCcHHHHHH
Confidence            5677888988775 3 5689999999999999999999999999999875   478889999999999999999999999


Q ss_pred             HhhcC
Q 048248          311 LARNM  315 (316)
Q Consensus       311 Ll~~~  315 (316)
                      |++.+
T Consensus       310 lL~~~  314 (489)
T PHA02798        310 ILNKK  314 (489)
T ss_pred             HHccC
Confidence            98864


No 28 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=6.8e-36  Score=282.46  Aligned_cols=303  Identities=26%  Similarity=0.356  Sum_probs=193.8

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG   83 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g   83 (316)
                      ..+|+|.|+..+..+.+ +++...|.++...+..|.||||.|+..|+.+++.+++..++.. .+.+..|.||+|.|++.+
T Consensus       209 ~~tpl~~a~~~nri~~~-eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~-~~~~vr~~tplh~AA~~~  286 (1143)
T KOG4177|consen  209 GFTPLHIACKKNRIKVV-ELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASV-NVSTVRGETPLHMAARAG  286 (1143)
T ss_pred             CCCchhhhcccccccee-eeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhccccc-CcccccccCcchhhhccc
Confidence            34577777777777777 4445556667777777777777777777777777777766653 445666777777777777


Q ss_pred             ChhHHHHhhccCCCCCCCC-----------------------------------c-----------chh----------h
Q 048248           84 NFGAAQIFMRPHGNGNNTG-----------------------------------T-----------FDD----------I  107 (316)
Q Consensus        84 ~~~~~~~l~~~~~~~~~~~-----------------------------------~-----------~~~----------~  107 (316)
                      ..++++++++.+....-..                                   +           ..+          .
T Consensus       287 ~~e~~~~ll~~ga~~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~  366 (1143)
T KOG4177|consen  287 QVEVCKLLLQNGADVLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQ  366 (1143)
T ss_pred             hhhhHhhhhccCcccccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccc
Confidence            7777777776554321110                                   0           000          0


Q ss_pred             hhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccccc---------------------------ccccCCCCCchHHHH
Q 048248          108 LRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYN---------------------------NKAKQGPNNLTLLHS  160 (316)
Q Consensus       108 ~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~---------------------------~~~~~~~~~~t~lh~  160 (316)
                      -...+..|.||+|.|+..++.++++.++..+..+....                           ..+..+..|+||+|+
T Consensus       367 ~~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhv  446 (1143)
T KOG4177|consen  367 RRQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHV  446 (1143)
T ss_pred             cCcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhh
Confidence            01135567788888888888888888888776542111                           111223457788888


Q ss_pred             HHHhC-cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCC----------------------------
Q 048248          161 AIIKS-QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDED----------------------------  211 (316)
Q Consensus       161 A~~~~-~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~----------------------------  211 (316)
                      |+..| ..+....++ ..+.+++.....|.||||.|++.|+.+++..++...                            
T Consensus       447 aa~~g~~~~~~~~l~-~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~  525 (1143)
T KOG4177|consen  447 AAKKGRYLQIARLLL-QYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKI  525 (1143)
T ss_pred             hhhcccHhhhhhhHh-hcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHH
Confidence            88777 445444433 444557777788888888888888877776666533                            


Q ss_pred             ----CCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccccccccc
Q 048248          212 ----DSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINS  287 (316)
Q Consensus       212 ----~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~  287 (316)
                          +...+.++..|+||||.|+.+|+.++|++|++++. +++.+++.|+||||.||.+|+.+|+.+|+++|..   +|.
T Consensus       526 l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gA-dv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~---vna  601 (1143)
T KOG4177|consen  526 LLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGA-DVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGAS---VNA  601 (1143)
T ss_pred             HhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCc-cccccCCCCCChhhHHHHcChHHHHHHHHHcCCC---CCc
Confidence                22333445556677777777777777777776543 3566667777777777777777777777766543   566


Q ss_pred             CCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248          288 SDVDGNTPLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       288 ~d~~g~t~L~~A~~~~~~~~~~~Ll~  313 (316)
                      .|.+|.||||+|++.|+..+++.|+.
T Consensus       602 ~d~~g~TpL~iA~~lg~~~~~k~l~~  627 (1143)
T KOG4177|consen  602 ADLDGFTPLHIAVRLGYLSVVKLLKV  627 (1143)
T ss_pred             ccccCcchhHHHHHhcccchhhHHHh
Confidence            66777777777777777777776654


No 29 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=2.2e-35  Score=279.06  Aligned_cols=280  Identities=25%  Similarity=0.291  Sum_probs=212.1

Q ss_pred             CcccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH
Q 048248            2 STVDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAAR   81 (316)
Q Consensus         2 ~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~   81 (316)
                      +...+|+|.|++.|+.+.++.++.. +..++.....|.||||.|+.+++..+|+.+++.++.. +..+..|.||+|+|+.
T Consensus       372 ~k~~~pl~la~~~g~~~~v~Lll~~-ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~-~~~~~lG~T~lhvaa~  449 (1143)
T KOG4177|consen  372 EKGFTPLHLAVKSGRVSVVELLLEA-GADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASP-NAKAKLGYTPLHVAAK  449 (1143)
T ss_pred             ccCCcchhhhcccCchhHHHhhhhc-cCCcccCCCCCcceeeehhhccCcceEEEEeccCCCh-hhHhhcCCChhhhhhh
Confidence            4456677777777777777544443 4456677777777777777777777777777766653 4456667777777777


Q ss_pred             hC-ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHH
Q 048248           82 AG-NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHS  160 (316)
Q Consensus        82 ~g-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~  160 (316)
                      .| ..+.+..+...+..          ++.....|.||||.|+..|+.+++..+++.+...      ....+.+.|++|+
T Consensus       450 ~g~~~~~~~~l~~~g~~----------~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~------~~~~~~~l~~lhl  513 (1143)
T KOG4177|consen  450 KGRYLQIARLLLQYGAD----------PNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAND------NLDAKKGLTPLHL  513 (1143)
T ss_pred             cccHhhhhhhHhhcCCC----------cchhccccCcchhhhhccCCchHHHHhhhcCCcc------Cccchhccchhhh
Confidence            77 44555444443322          3345678888888888888888888888765322      2234467889999


Q ss_pred             HHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHH
Q 048248          161 AIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILEN  240 (316)
Q Consensus       161 A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~  240 (316)
                      |...+....++.++..+ ..++.++.+|.||||.|+..|+.++|+.|++.+. +.+.+++.|+||||.||..|+.+|+++
T Consensus       514 a~~~~~v~~~~~l~~~g-a~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gA-dv~ak~~~G~TPLH~Aa~~G~~~i~~L  591 (1143)
T KOG4177|consen  514 AADEDTVKVAKILLEHG-ANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGA-DVNAKDKLGYTPLHQAAQQGHNDIAEL  591 (1143)
T ss_pred             hhhhhhHHHHHHHhhcC-CceehhcccccchHHHHHhcCCchHHHHhhhCCc-cccccCCCCCChhhHHHHcChHHHHHH
Confidence            98888888887777665 4588999999999999999999999999996655 567789999999999999999999999


Q ss_pred             HHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccc--cccccCCCCCCcHHHHHHHc
Q 048248          241 LLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVE--DLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       241 Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~--~~~~~~d~~g~t~L~~A~~~  302 (316)
                      |++++. .+|..|.+|.||||+|+..|+.++++.|+..+...  .+....+.+|.+|..++...
T Consensus       592 Llk~GA-~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e~~  654 (1143)
T KOG4177|consen  592 LLKHGA-SVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAEEL  654 (1143)
T ss_pred             HHHcCC-CCCcccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHHHh
Confidence            998764 57999999999999999999999999999876431  12345678899998877544


No 30 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.4e-33  Score=257.28  Aligned_cols=256  Identities=15%  Similarity=0.164  Sum_probs=205.4

Q ss_pred             ccHHHHHHHhcC--ChHHHHHHHHhcCCccccccCCCChHHHHHHHhC------CHHHHHHHHhcCCCccccCCCCCCcH
Q 048248            4 VDHKLFRALRHG--YTDKVREFARLNGNRILGTSQNGDTALHIAARFG------HEILVMEILKHQSDLVSVPNHKSETP   75 (316)
Q Consensus         4 ~~~~l~~a~~~g--~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~------~~~~v~~Ll~~~~~~~~~~~~~g~tp   75 (316)
                      ..++++.++..+  +.+.++.|++ .|++++..+ .+.||||.|+..+      +.++|++|++.|++ ++..+..|.||
T Consensus        35 g~t~l~~~~~~~~~~~~iv~~Ll~-~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gad-in~~d~~g~tp  111 (494)
T PHA02989         35 GNSILLLYLKRKDVKIKIVKLLID-NGADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGAD-INLKTFNGVSP  111 (494)
T ss_pred             CCCHHHHHHhcCCCChHHHHHHHH-cCCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCC-CCCCCCCCCcH
Confidence            345776654443  5788866665 567888765 5799999998754      46899999999987 46678899999


Q ss_pred             HHHHHHh---CChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhc--CChhHHHHHHhhCCCcccccccccC
Q 048248           76 MHVAARA---GNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRK--CDGKMAFTMIKKDPEPIRYNNKAKQ  150 (316)
Q Consensus        76 Lh~A~~~---g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~--~~~~~~~~ll~~~~~~~~~~~~~~~  150 (316)
                      ||.|+..   ++.+++++|++.+++.+         ..+|..|+||||+|+..  ++.++++.|++.|+++...     .
T Consensus       112 L~~a~~~~~~~~~eiv~~Ll~~Gadin---------~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~-----~  177 (494)
T PHA02989        112 IVCFIYNSNINNCDMLRFLLSKGINVN---------DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK-----T  177 (494)
T ss_pred             HHHHHHhcccCcHHHHHHHHHCCCCcc---------cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc-----c
Confidence            9988765   67899999999876531         24588999999999865  5789999999998776321     3


Q ss_pred             CCCCchHHHHHHHhC----cHHHHHHHHHhccccccccccCCCcHHHHHHHhC------cHHHHHHhhcCCCCcccccCC
Q 048248          151 GPNNLTLLHSAIIKS----QFVVMAKILEAKRDLINVRDERNRNPLRYAAALG------HFKIACRLSDEDDSLVYQHDC  220 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~----~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g------~~~~~~~ll~~~~~~~~~~d~  220 (316)
                      +..|.||||+|+..+    +.++++.|+..+. +++.+|..|.||||.++..+      ..+++..++ .+ .+++.+|.
T Consensus       178 ~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga-~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~-advn~~d~  254 (494)
T PHA02989        178 SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGV-NIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KY-IKINKKDK  254 (494)
T ss_pred             cccCCChHHHHHhcccccccHHHHHHHHhCCC-CccccCCccccHHHHHHHhchhhcccchHHHHHHH-hC-CCCCCCCC
Confidence            457899999998754    8899999988765 58888989999999887643      345555444 44 67788999


Q ss_pred             CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248          221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE  280 (316)
Q Consensus       221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~  280 (316)
                      .|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.++++.|++..+
T Consensus       255 ~G~TpL~~Aa~~~~~~~v~~LL~~Ga-din~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p  313 (494)
T PHA02989        255 KGFNPLLISAKVDNYEAFNYLLKLGD-DIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP  313 (494)
T ss_pred             CCCCHHHHHHHhcCHHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence            99999999999999999999998764 579999999999999999999999999998653


No 31 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.4e-33  Score=255.24  Aligned_cols=250  Identities=17%  Similarity=0.138  Sum_probs=204.6

Q ss_pred             HHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHh-----CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC--
Q 048248           11 ALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARF-----GHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG--   83 (316)
Q Consensus        11 a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~-----~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g--   83 (316)
                      +...++.+.++.|+. .|.+++..+..|.||||+|+..     ++.+++++|++.|++ ++..+.+|+||||+|+..+  
T Consensus        45 ~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Gad-iN~~d~~G~TpLh~a~~~~~~  122 (489)
T PHA02798         45 QRDSPSTDIVKLFIN-LGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGAD-INKKNSDGETPLYCLLSNGYI  122 (489)
T ss_pred             hCCCCCHHHHHHHHH-CCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCC-CCCCCCCcCcHHHHHHHcCCc
Confidence            444557888877765 4678999999999999999864     568999999999987 4667889999999999876  


Q ss_pred             -ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCC---hhHHHHHHhhCCCcccccccccCCCCCchHHH
Q 048248           84 -NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCD---GKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLH  159 (316)
Q Consensus        84 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh  159 (316)
                       +.+++++|++.+++          +...|..|.||||+|++.++   .++++.|++.|.++..     ..+..|.||||
T Consensus       123 ~~~~iv~~Ll~~Gad----------vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~-----~~~~~~~t~Lh  187 (489)
T PHA02798        123 NNLEILLFMIENGAD----------TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINT-----HNNKEKYDTLH  187 (489)
T ss_pred             ChHHHHHHHHHcCCC----------ccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCccc-----ccCcCCCcHHH
Confidence             67999999987655          34568999999999999887   8999999999876532     11346789999


Q ss_pred             HHHHh----CcHHHHHHHHHhccccccccccCCCcHHHH-------HHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHH
Q 048248          160 SAIIK----SQFVVMAKILEAKRDLINVRDERNRNPLRY-------AAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHL  228 (316)
Q Consensus       160 ~A~~~----~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~-------A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~  228 (316)
                      .++..    ++.++++.|+..+. .++..+..|.++++.       +...+..+++..|+. + .+++.+|..|+||||+
T Consensus       188 ~~~~~~~~~~~~~ivk~Li~~Ga-~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~-~dvN~~d~~G~TPL~~  264 (489)
T PHA02798        188 CYFKYNIDRIDADILKLFVDNGF-IINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-Y-IDINQVDELGFNPLYY  264 (489)
T ss_pred             HHHHhccccCCHHHHHHHHHCCC-CcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-c-CCCCCcCcCCccHHHH
Confidence            98764    47899999887764 578888899999872       333455566666554 3 6778899999999999


Q ss_pred             HHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccc
Q 048248          229 ASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEV  281 (316)
Q Consensus       229 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~  281 (316)
                      |+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++..|++.+..
T Consensus       265 A~~~~~~~~v~~LL~~G-Adin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~  316 (489)
T PHA02798        265 SVSHNNRKIFEYLLQLG-GDINIITELGNTCLFTAFENESKFIFNSILNKKPN  316 (489)
T ss_pred             HHHcCcHHHHHHHHHcC-CcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCC
Confidence            99999999999999875 45799999999999999999999999999987643


No 32 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.5e-32  Score=250.71  Aligned_cols=307  Identities=13%  Similarity=0.073  Sum_probs=220.0

Q ss_pred             ccHHHHHHHhcC--ChHHHHHHHHhc-CCccccccCCCChHHHHHHH--hCCHHHHHHHHhcCCCccccC-C----CCCC
Q 048248            4 VDHKLFRALRHG--YTDKVREFARLN-GNRILGTSQNGDTALHIAAR--FGHEILVMEILKHQSDLVSVP-N----HKSE   73 (316)
Q Consensus         4 ~~~~l~~a~~~g--~~~~~~~ll~~~-~~~~~~~~~~g~t~Lh~A~~--~~~~~~v~~Ll~~~~~~~~~~-~----~~g~   73 (316)
                      ..+|||.|+..|  +.+.++.|+..+ +.+++..+.-+++|||.++.  .++.++|++|+..++..++.. +    ..|.
T Consensus        77 G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~  156 (672)
T PHA02730         77 GLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGL  156 (672)
T ss_pred             CCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccch
Confidence            567888888866  677786666553 34557777778888888887  677888888886433222222 1    2688


Q ss_pred             cHHHHHHHhCChhHHHHhhccCCCCCCC----C----cc----------h-------------------hhhhccCCCCC
Q 048248           74 TPMHVAARAGNFGAAQIFMRPHGNGNNT----G----TF----------D-------------------DILRKRDEEGN  116 (316)
Q Consensus        74 tpLh~A~~~g~~~~~~~l~~~~~~~~~~----~----~~----------~-------------------~~~~~~~~~g~  116 (316)
                      +|++++...++.+++++|++.++.++..    .    ..          .                   ..++.+|.+|.
T Consensus       157 ~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~  236 (672)
T PHA02730        157 VDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGS  236 (672)
T ss_pred             hhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCC
Confidence            8888888888888888888887765200    0    00          0                   01345788999


Q ss_pred             cHHHHHH--hcCChhHHHHHHh--------------------------------hCCCccc----------ccccc----
Q 048248          117 TPLHNAV--RKCDGKMAFTMIK--------------------------------KDPEPIR----------YNNKA----  148 (316)
Q Consensus       117 t~L~~a~--~~~~~~~~~~ll~--------------------------------~~~~~~~----------~~~~~----  148 (316)
                      ||||++.  ..++.+++++|+.                                .+.+..-          ..+..    
T Consensus       237 TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~  316 (672)
T PHA02730        237 LPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSIT  316 (672)
T ss_pred             CHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccc
Confidence            9999643  4466899999998                                2222100          00000    


Q ss_pred             cCCCCCch---------------------HHHHHHHhC---cHHHHHHHHHhccccccccccCCCcHHHHHHHhCc----
Q 048248          149 KQGPNNLT---------------------LLHSAIIKS---QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH----  200 (316)
Q Consensus       149 ~~~~~~~t---------------------~lh~A~~~~---~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~----  200 (316)
                      ..+..|++                     .||.=...+   +.++++.|+..+. +++.. ..|.||||+|+..+.    
T Consensus       317 ~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GA-dIN~k-~~G~TpLH~Aa~~nnn~i~  394 (672)
T PHA02730        317 SYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGA-TMDKT-TDNNYPLHDYFVNNNNIVD  394 (672)
T ss_pred             cccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCC-CCCcC-CCCCcHHHHHHHHcCCcch
Confidence            02223433                     455555544   5788888887764 57875 799999999998875    


Q ss_pred             HHHHHHhhcCCCC-cccccCCCCCcHHHH---HHhcC---------CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248          201 FKIACRLSDEDDS-LVYQHDCNGQSPLHL---ASQNG---------QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG  267 (316)
Q Consensus       201 ~~~~~~ll~~~~~-~~~~~d~~g~tpLh~---A~~~g---------~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g  267 (316)
                      .++++.|++.++. +++.+|.+|.||||.   |...+         ..+++++|+..+ ++++.+|..|+||||+|+..+
T Consensus       395 ~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~G-ADINakD~~G~TPLh~Aa~~~  473 (672)
T PHA02730        395 VNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYM-DDIDMIDNENKTLLYYAVDVN  473 (672)
T ss_pred             HHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcc-cchhccCCCCCCHHHHHHHhC
Confidence            7999999988763 677889999999994   33332         235689999765 457999999999999999999


Q ss_pred             ChhHHHHHhcCcccccccccCCC-CCCcHHHHHHHc--CChhHHHHHhhcCC
Q 048248          268 HADVVVFILKQPEVEDLINSSDV-DGNTPLHLAAIN--NHFNIILVLARNMS  316 (316)
Q Consensus       268 ~~~~~~~Ll~~~~~~~~~~~~d~-~g~t~L~~A~~~--~~~~~~~~Ll~~~~  316 (316)
                      +.+++++|++.|.   .++..|. .|+||||+|+..  ++.+++++|++++.
T Consensus       474 ~~eive~LI~~GA---dIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga  522 (672)
T PHA02730        474 NIQFARRLLEYGA---SVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHP  522 (672)
T ss_pred             CHHHHHHHHHCCC---CCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCC
Confidence            9999999999875   3677886 599999999984  78999999998763


No 33 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=3e-33  Score=236.93  Aligned_cols=216  Identities=25%  Similarity=0.329  Sum_probs=179.6

Q ss_pred             HHHHHhcCChHHHHHHHHhcCC----ccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCcccc--------CCCCCCcH
Q 048248            8 LFRALRHGYTDKVREFARLNGN----RILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSV--------PNHKSETP   75 (316)
Q Consensus         8 l~~a~~~g~~~~~~~ll~~~~~----~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~--------~~~~g~tp   75 (316)
                      .+.|++.|.+..+..|+....+    .......+|.|||-+||++||.++|++|++.......+        ...+|.+|
T Consensus         8 ~~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegapp   87 (615)
T KOG0508|consen    8 VINAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPP   87 (615)
T ss_pred             HHHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCch
Confidence            4588999999999888765432    12234678999999999999999999999843222221        23578899


Q ss_pred             HHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCc
Q 048248           76 MHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNL  155 (316)
Q Consensus        76 Lh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~  155 (316)
                      |+.|+..|++++|+.|++.+++++          .......|||..|+-.|+.+++++|+++++++      ...+..|.
T Consensus        88 LWaAsaAGHl~vVk~L~~~ga~VN----------~tT~TNStPLraACfDG~leivKyLvE~gad~------~IanrhGh  151 (615)
T KOG0508|consen   88 LWAASAAGHLEVVKLLLRRGASVN----------DTTRTNSTPLRAACFDGHLEIVKYLVEHGADP------EIANRHGH  151 (615)
T ss_pred             hhHHhccCcHHHHHHHHHhcCccc----------cccccCCccHHHHHhcchhHHHHHHHHcCCCC------cccccCCC
Confidence            999999999999999999875543          34567779999999999999999999988775      34566899


Q ss_pred             hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      |+||+||.+|+.+++++|++.+. ++|.++..|.|+||.+++.|+.++++.|++.+....  +|..|.|||..|+..|+.
T Consensus       152 TcLmIa~ykGh~~I~qyLle~gA-Dvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~--~d~~GmtPL~~Aa~tG~~  228 (615)
T KOG0508|consen  152 TCLMIACYKGHVDIAQYLLEQGA-DVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID--VDGHGMTPLLLAAVTGHT  228 (615)
T ss_pred             eeEEeeeccCchHHHHHHHHhCC-CcchhcccCchHHHhhhhcccHHHHHHHHhCCceee--ecCCCCchHHHHhhhcch
Confidence            99999999999999999998875 589999999999999999999999999998777653  688899999999999998


Q ss_pred             hHHHHHH
Q 048248          236 SILENLL  242 (316)
Q Consensus       236 ~iv~~Ll  242 (316)
                      ++|++|+
T Consensus       229 ~iVe~L~  235 (615)
T KOG0508|consen  229 DIVERLL  235 (615)
T ss_pred             HHHHHHh
Confidence            7777444


No 34 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00  E-value=9.9e-34  Score=248.96  Aligned_cols=211  Identities=25%  Similarity=0.345  Sum_probs=149.1

Q ss_pred             ChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcH
Q 048248           39 DTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTP  118 (316)
Q Consensus        39 ~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~  118 (316)
                      .+-++.|+..|..+.|+.|++.....++.+|.+|.|+||+|+.+++++++++|+..+++++..+         ..-+.||
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g---------G~l~stP  115 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG---------GVLGSTP  115 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC---------CCCCCCc
Confidence            3445666666666666666665233345566666677777777777777777776666544322         1345667


Q ss_pred             HHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHh
Q 048248          119 LHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAAL  198 (316)
Q Consensus       119 L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~  198 (316)
                      ||+|++.|+..++..|+++|+++.      ..|..|+||+|+|+..|+...+.++|.++ .+++.+|.+|+||||+|+.+
T Consensus       116 LHWAar~G~~~vv~lLlqhGAdpt------~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAayk  188 (600)
T KOG0509|consen  116 LHWAARNGHISVVDLLLQHGADPT------LKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAAYK  188 (600)
T ss_pred             chHHHHcCcHHHHHHHHHcCCCCc------eecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHHHh
Confidence            777777777777777777766652      34557788888888888888888888776 45788888888888888888


Q ss_pred             CcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248          199 GHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN  266 (316)
Q Consensus       199 g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~  266 (316)
                      |+...+..|++-++......|..|.||||+|+..|+..++. |+..++...+..|.+|.||+.+|.+.
T Consensus       189 g~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  189 GFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             cccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEe-hhhhcCCcccccccCCCCHHHHHHHh
Confidence            88766777777666655444578888888888888888888 66666666678888888888888766


No 35 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.98  E-value=9.7e-32  Score=236.48  Aligned_cols=212  Identities=24%  Similarity=0.299  Sum_probs=180.2

Q ss_pred             CCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccC
Q 048248           71 KSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQ  150 (316)
Q Consensus        71 ~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~  150 (316)
                      ...+.++.|+..|.++-++.+++..+..         ++..|++|.|+||+|+.+++.+++++|+++++++..     ..
T Consensus        43 ~~~~~~v~A~q~G~l~~v~~lve~~g~~---------v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~-----~g  108 (600)
T KOG0509|consen   43 SSLDDIVKATQYGELETVKELVESEGES---------VNNPDREGVTLLHWAAINNRLDVARYLISHGADVNA-----IG  108 (600)
T ss_pred             hhhhhhhhHhhcchHHHHHHHHhhcCcC---------CCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccc-----cC
Confidence            3556789999999999999999873221         334588999999999999999999999999988742     22


Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  230 (316)
                      +.-+.||||+|+++|+..+|..|++.++ +++.+|.+|.||||.|++.|+.-++.+++.++ .+++.+|.+|+||||+|+
T Consensus       109 G~l~stPLHWAar~G~~~vv~lLlqhGA-dpt~~D~~G~~~lHla~~~~~~~~vayll~~~-~d~d~~D~~grTpLmwAa  186 (600)
T KOG0509|consen  109 GVLGSTPLHWAARNGHISVVDLLLQHGA-DPTLKDKQGLTPLHLAAQFGHTALVAYLLSKG-ADIDLRDNNGRTPLMWAA  186 (600)
T ss_pred             CCCCCCcchHHHHcCcHHHHHHHHHcCC-CCceecCCCCcHHHHHHHhCchHHHHHHHHhc-ccCCCcCCCCCCHHHHHH
Confidence            3467899999999999999999887765 58999999999999999999999999999887 667889999999999999


Q ss_pred             hcCCHhHHHHHHhhCCCCccccc-cCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHc
Q 048248          231 QNGQLSILENLLHSYPDSIEFID-NKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       231 ~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~  302 (316)
                      .+|+...++.|+.-++. +..+| .+|.||||||+..|+..++. |+..++.  ..+..|.+|+||+.+|.+.
T Consensus       187 ykg~~~~v~~LL~f~a~-~~~~d~~~g~TpLHwa~~~gN~~~v~-Ll~~g~~--~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  187 YKGFALFVRRLLKFGAS-LLLTDDNHGNTPLHWAVVGGNLTAVK-LLLEGGA--DLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HhcccHHHHHHHHhccc-ccccccccCCchHHHHHhcCCcceEe-hhhhcCC--cccccccCCCCHHHHHHHh
Confidence            99999988989976654 56666 89999999999999999999 5544433  2566788899999999776


No 36 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.97  E-value=3.8e-29  Score=226.22  Aligned_cols=290  Identities=15%  Similarity=0.108  Sum_probs=212.5

Q ss_pred             HHH-HHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHH-hCCHHHHHHHHhcCCCc--------------------
Q 048248            7 KLF-RALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAAR-FGHEILVMEILKHQSDL--------------------   64 (316)
Q Consensus         7 ~l~-~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~-~~~~~~v~~Ll~~~~~~--------------------   64 (316)
                      +++ .|+..|+.+.++.|+.. |++++..+..|+||+|+|+. .++.+++++|++.|++.                    
T Consensus        74 ~~~~~~s~n~~lElvk~LI~~-GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~  152 (631)
T PHA02792         74 IFEYLCSDNIDIELLKLLISK-GLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEY  152 (631)
T ss_pred             HHHHHHHhcccHHHHHHHHHc-CCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccc
Confidence            443 47889999999877765 78899988889999999965 69999999999998652                    


Q ss_pred             ---------------cccCCCCCCcHHHHHHHhC-------ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHH
Q 048248           65 ---------------VSVPNHKSETPMHVAARAG-------NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNA  122 (316)
Q Consensus        65 ---------------~~~~~~~g~tpLh~A~~~g-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a  122 (316)
                                     .+..+..|.||||+|+.++       +.++++.|+..++..          +..|..|.||||+|
T Consensus       153 ~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~----------~~~d~~g~t~l~~~  222 (631)
T PHA02792        153 YNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEM----------RYYTYREHTTLYYY  222 (631)
T ss_pred             cchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCc----------CccCCCCChHHHHH
Confidence                           1134556999999999999       899999999886653          34678899999999


Q ss_pred             HhcC--ChhHHHHHHhhCCCcc------------cccccc-cCCC-------CCch------------------------
Q 048248          123 VRKC--DGKMAFTMIKKDPEPI------------RYNNKA-KQGP-------NNLT------------------------  156 (316)
Q Consensus       123 ~~~~--~~~~~~~ll~~~~~~~------------~~~~~~-~~~~-------~~~t------------------------  156 (316)
                      +.++  +.++++.|+...-+-.            .+.+.+ .-|.       .|.+                        
T Consensus       223 ~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~  302 (631)
T PHA02792        223 VDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRY  302 (631)
T ss_pred             HHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHH
Confidence            9999  7888888877522110            000000 0000       0111                        


Q ss_pred             ------HHHHHHHhC--cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCC--CcHH
Q 048248          157 ------LLHSAIIKS--QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNG--QSPL  226 (316)
Q Consensus       157 ------~lh~A~~~~--~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g--~tpL  226 (316)
                            .||.=...+  +.++++.|+..+... + + .....+++.|+..|..++++.|++.++ +++.+|.+|  .|||
T Consensus       303 ~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~-~-r-~~~~n~~~~Aa~~gn~eIVelLIs~GA-DIN~kD~~g~~~TpL  378 (631)
T PHA02792        303 TDSIQDLLSEYVSYHTVYINVIKCMIDEGATL-Y-R-FKHINKYFQKFDNRDPKVVEYILKNGN-VVVEDDDNIINIMPL  378 (631)
T ss_pred             hHHHHHHHHHHHhcCCccHHHHHHHHHCCCcc-c-c-CCcchHHHHHHHcCCHHHHHHHHHcCC-chhhhcCCCCChhHH
Confidence                  122222333  456777777766542 1 2 235667999999999999999998764 456677765  6999


Q ss_pred             HHHHhcCCHh---HHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHH--
Q 048248          227 HLASQNGQLS---ILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAI--  301 (316)
Q Consensus       227 h~A~~~g~~~---iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~--  301 (316)
                      |+|+.....+   ++++|++.+ ++++.+|..|+||||+|+..++.+++++|++.|.   .++.+|..|+||||+|+.  
T Consensus       379 h~A~~n~~~~v~~IlklLIs~G-ADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA---DIN~kD~~G~TpL~~A~~~~  454 (631)
T PHA02792        379 FPTLSIHESDVLSILKLCKPYI-DDINKIDKHGRSILYYCIESHSVSLVEWLIDNGA---DINITTKYGSTCIGICVILA  454 (631)
T ss_pred             HHHHHhccHhHHHHHHHHHhcC-CccccccccCcchHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHHH
Confidence            9987766543   577778765 4579999999999999999999999999999864   478899999999999976  


Q ss_pred             -cC-------ChhHHHHHhhcC
Q 048248          302 -NN-------HFNIILVLARNM  315 (316)
Q Consensus       302 -~~-------~~~~~~~Ll~~~  315 (316)
                       .+       ..++++.|+.++
T Consensus       455 ~~~~~~i~~~~~~il~lLLs~~  476 (631)
T PHA02792        455 HACIPEIAELYIKILEIILSKL  476 (631)
T ss_pred             hcccHHHHHHHHHHHHHHHhcC
Confidence             22       245567766653


No 37 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96  E-value=2.8e-29  Score=212.99  Aligned_cols=198  Identities=25%  Similarity=0.289  Sum_probs=169.4

Q ss_pred             cCCCCCcHHHHHHhcCChhHHHHHHhhC-CCccccc--ccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccC
Q 048248          111 RDEEGNTPLHNAVRKCDGKMAFTMIKKD-PEPIRYN--NKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDER  187 (316)
Q Consensus       111 ~~~~g~t~L~~a~~~~~~~~~~~ll~~~-~~~~~~~--~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~  187 (316)
                      .+.+|.|||..|++.|+.+++++|+++. .++...-  .-......|-+||..|+..|++++|+.|+..+ +.+|.....
T Consensus        38 ~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~g-a~VN~tT~T  116 (615)
T KOG0508|consen   38 EVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRG-ASVNDTTRT  116 (615)
T ss_pred             cccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhc-Ccccccccc
Confidence            4678889999999999999999999953 2221000  01122336789999999999999999999887 668888888


Q ss_pred             CCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248          188 NRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG  267 (316)
Q Consensus       188 g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g  267 (316)
                      ..|||..||.-|+++++++|+ ..+++++..|+.|.|.||+||..||.+|+++|++.+. +++.++..|.|+||.|++.|
T Consensus       117 NStPLraACfDG~leivKyLv-E~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA-Dvn~ks~kGNTALH~caEsG  194 (615)
T KOG0508|consen  117 NSTPLRAACFDGHLEIVKYLV-EHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA-DVNAKSYKGNTALHDCAESG  194 (615)
T ss_pred             CCccHHHHHhcchhHHHHHHH-HcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCC-CcchhcccCchHHHhhhhcc
Confidence            899999999999999999999 5566678899999999999999999999999998765 47999999999999999999


Q ss_pred             ChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          268 HADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       268 ~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      +.+++++|++++...    .+|..|.|||..|+..|+.++|+.|++.+
T Consensus       195 ~vdivq~Ll~~ga~i----~~d~~GmtPL~~Aa~tG~~~iVe~L~~~~  238 (615)
T KOG0508|consen  195 SVDIVQLLLKHGAKI----DVDGHGMTPLLLAAVTGHTDIVERLLQCE  238 (615)
T ss_pred             cHHHHHHHHhCCcee----eecCCCCchHHHHhhhcchHHHHHHhcCC
Confidence            999999999997643    35778999999999999999999998643


No 38 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=8.6e-28  Score=195.39  Aligned_cols=177  Identities=21%  Similarity=0.144  Sum_probs=147.7

Q ss_pred             CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC--cHHHHHHHHHhccccccccc-cCC
Q 048248          112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS--QFVVMAKILEAKRDLINVRD-ERN  188 (316)
Q Consensus       112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~--~~~~~~~ll~~~~~~~~~~d-~~g  188 (316)
                      ...++||||.|++.++.+.++.|+...         +..+..|.||||+|+..+  +.++++.|++.+. +++.++ ..|
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~---------n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~ga-dvn~~~~~~g   87 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFV---------NDCNDLYETPIFSCLEKDKVNVEILKFLIENGA-DVNFKTRDNN   87 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhh---------hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCC-CCCccCCCCC
Confidence            456799999999999999999998742         224567899999999754  8899999998765 578886 489


Q ss_pred             CcHHHHHHHh---CcHHHHHHhhcCCCCcccccCCCCCcHHHHHHh--cCCHhHHHHHHhhCCCCccccccCCCcHHHH-
Q 048248          189 RNPLRYAAAL---GHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQ--NGQLSILENLLHSYPDSIEFIDNKNRNILHL-  262 (316)
Q Consensus       189 ~tpLh~A~~~---g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~--~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~-  262 (316)
                      .||||+|+..   +..++++.|++. +.+++.+|..|.||||+|+.  .++.+++++|++.+ .+++.+|..|.||||. 
T Consensus        88 ~TpLh~a~~~~~~~~~eiv~~Ll~~-gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g-adin~~d~~g~t~Lh~~  165 (209)
T PHA02859         88 LSALHHYLSFNKNVEPEILKILIDS-GSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG-VSFLNKDFDNNNILYSY  165 (209)
T ss_pred             CCHHHHHHHhCccccHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC-CCcccccCCCCcHHHHH
Confidence            9999998764   467888888865 55677899999999999876  47899999999876 4578999999999996 


Q ss_pred             HHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcC
Q 048248          263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINN  303 (316)
Q Consensus       263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~  303 (316)
                      |+..++.+++++|++.+.   .++.+|..|+||||+|..++
T Consensus       166 a~~~~~~~iv~~Ll~~Ga---di~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        166 ILFHSDKKIFDFLTSLGI---DINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHhcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHhhhh
Confidence            567889999999998864   46788999999999998765


No 39 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.96  E-value=2.3e-27  Score=192.83  Aligned_cols=176  Identities=14%  Similarity=0.137  Sum_probs=145.4

Q ss_pred             CCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcC--ChhHHHHHHhhCCCccccccc
Q 048248           70 HKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKC--DGKMAFTMIKKDPEPIRYNNK  147 (316)
Q Consensus        70 ~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~--~~~~~~~ll~~~~~~~~~~~~  147 (316)
                      ..++||||+|+..|+.+.++.|+..             ++..|..|.||||+|+..+  +.++++.|++.++++..    
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~-------------~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~----   81 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF-------------VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNF----   81 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh-------------hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCc----
Confidence            4578999999999999999999853             2345789999999999754  78999999999877632    


Q ss_pred             ccCC-CCCchHHHHHHHh---CcHHHHHHHHHhccccccccccCCCcHHHHHHH--hCcHHHHHHhhcCCCCcccccCCC
Q 048248          148 AKQG-PNNLTLLHSAIIK---SQFVVMAKILEAKRDLINVRDERNRNPLRYAAA--LGHFKIACRLSDEDDSLVYQHDCN  221 (316)
Q Consensus       148 ~~~~-~~~~t~lh~A~~~---~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~--~g~~~~~~~ll~~~~~~~~~~d~~  221 (316)
                        .+ ..|.||||+|+..   ++.++++.|+..+ .+++.+|.+|.||||+|+.  .++.++++.|++.+ .+++.+|.+
T Consensus        82 --~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~g-adin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~g-adin~~d~~  157 (209)
T PHA02859         82 --KTRDNNLSALHHYLSFNKNVEPEILKILIDSG-SSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSG-VSFLNKDFD  157 (209)
T ss_pred             --cCCCCCCCHHHHHHHhCccccHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcC-CCcccccCC
Confidence              22 3689999998764   4688888888665 5689999999999999986  45789999998666 456678999


Q ss_pred             CCcHHHH-HHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248          222 GQSPLHL-ASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG  267 (316)
Q Consensus       222 g~tpLh~-A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g  267 (316)
                      |.||||. |+..++.+++++|++.+. +++.+|..|+||||+|+.++
T Consensus       158 g~t~Lh~~a~~~~~~~iv~~Ll~~Ga-di~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        158 NNNILYSYILFHSDKKIFDFLTSLGI-DINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CCcHHHHHHHhcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHhhhh
Confidence            9999995 567899999999998754 57999999999999998763


No 40 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95  E-value=3.4e-26  Score=207.14  Aligned_cols=274  Identities=12%  Similarity=0.023  Sum_probs=203.3

Q ss_pred             CccccccCCCChHHHHHHH-hCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH-hCChhHHHHhhccCCCCCC--CCc-
Q 048248           29 NRILGTSQNGDTALHIAAR-FGHEILVMEILKHQSDLVSVPNHKSETPMHVAAR-AGNFGAAQIFMRPHGNGNN--TGT-  103 (316)
Q Consensus        29 ~~~~~~~~~g~t~Lh~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~-~g~~~~~~~l~~~~~~~~~--~~~-  103 (316)
                      ..++..+-+|.+++|+-+. .|+.++|++|+.+|++. +..+..|.||+|+|+. .++.+++++|++.+++.+.  ..+ 
T Consensus        62 ~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdv-N~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~  140 (631)
T PHA02792         62 SSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEI-NSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGY  140 (631)
T ss_pred             hCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCc-ccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCc
Confidence            3445566788899988765 57899999999999875 4566678999999976 5999999999999875321  111 


Q ss_pred             -----------------------chhhhhccCCCCCcHHHHHHhcC-------ChhHHHHHHhhCCCcccccccccCCCC
Q 048248          104 -----------------------FDDILRKRDEEGNTPLHNAVRKC-------DGKMAFTMIKKDPEPIRYNNKAKQGPN  153 (316)
Q Consensus       104 -----------------------~~~~~~~~~~~g~t~L~~a~~~~-------~~~~~~~ll~~~~~~~~~~~~~~~~~~  153 (316)
                                             .+..++..|..|.||||+|+..+       +.++++.|+.++.+..      ..+..
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~------~~d~~  214 (631)
T PHA02792        141 KIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMR------YYTYR  214 (631)
T ss_pred             chhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcC------ccCCC
Confidence                                   11244567888999999999988       7999999999987753      34667


Q ss_pred             CchHHHHHHHhC--cHHHHHHHHHhcccccc------------c------cc-------cCCCcH---------------
Q 048248          154 NLTLLHSAIIKS--QFVVMAKILEAKRDLIN------------V------RD-------ERNRNP---------------  191 (316)
Q Consensus       154 ~~t~lh~A~~~~--~~~~~~~ll~~~~~~~~------------~------~d-------~~g~tp---------------  191 (316)
                      |.||||+|+...  ..++++.|+...-....            .      .|       -.|.+|               
T Consensus       215 g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~  294 (631)
T PHA02792        215 EHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNII  294 (631)
T ss_pred             CChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhH
Confidence            999999999998  78888888763210000            0      00       012332               


Q ss_pred             ---------------HHHHHHhC--cHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCcccccc
Q 048248          192 ---------------LRYAAALG--HFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDN  254 (316)
Q Consensus       192 ---------------Lh~A~~~g--~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~  254 (316)
                                     ||.=.+.+  +.++++.|++.+....   ......+++.|+..|+.++|++|+++| ++++.+|.
T Consensus       295 ~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~G-ADIN~kD~  370 (631)
T PHA02792        295 ISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNG-NVVVEDDD  370 (631)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcC-CchhhhcC
Confidence                           11111223  3566777887776542   223567899999999999999999886 45788887


Q ss_pred             CC--CcHHHHHHHcCChh---HHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248          255 KN--RNILHLAAQNGHAD---VVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS  316 (316)
Q Consensus       255 ~g--~tpLh~A~~~g~~~---~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~  316 (316)
                      .|  .||||+|+.....+   ++++|++.+.   .+|.+|..|+||||+|++.++.+++++|+++++
T Consensus       371 ~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA---DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA  434 (631)
T PHA02792        371 NIINIMPLFPTLSIHESDVLSILKLCKPYID---DINKIDKHGRSILYYCIESHSVSLVEWLIDNGA  434 (631)
T ss_pred             CCCChhHHHHHHHhccHhHHHHHHHHHhcCC---ccccccccCcchHHHHHHcCCHHHHHHHHHCCC
Confidence            75  69999988776654   5778888764   478899999999999999999999999998764


No 41 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=7.7e-26  Score=197.85  Aligned_cols=212  Identities=13%  Similarity=0.013  Sum_probs=145.5

Q ss_pred             ChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCcc-----ccCCCCCCcHHHHHHH--hCChhHH
Q 048248           16 YTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLV-----SVPNHKSETPMHVAAR--AGNFGAA   88 (316)
Q Consensus        16 ~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~-----~~~~~~g~tpLh~A~~--~g~~~~~   88 (316)
                      ..+.+-+++...|..++..+.+|     +|+..+..+++++|+..+.+..     -..+..++|+||+++.  .|+.+++
T Consensus        60 ~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV  134 (437)
T PHA02795         60 PVDVLYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIV  134 (437)
T ss_pred             HHHHHHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHH
Confidence            34455455555566666666666     7777788888888888777633     0255667888888888  7788888


Q ss_pred             HHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHH
Q 048248           89 QIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFV  168 (316)
Q Consensus        89 ~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~  168 (316)
                      ++|+..|++.+.            .++.||||.|+..++.++++.|+..|....+.......+..+.|++|.|...++.+
T Consensus       135 ~~LI~~GADIn~------------~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~e  202 (437)
T PHA02795        135 DFMVDHGAVIYK------------IECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLE  202 (437)
T ss_pred             HHHHHCCCCCCC------------CCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHH
Confidence            888877665321            24467888888888888888888877543222111111234667888888777778


Q ss_pred             HHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC--------CHhHHHH
Q 048248          169 VMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG--------QLSILEN  240 (316)
Q Consensus       169 ~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g--------~~~iv~~  240 (316)
                      +++.|+..+ ++++.+|..|.||||+|+..|+.++++.|++.+ ++++.+|..|+||||+|+..|        +.+++++
T Consensus       203 Ive~LIs~G-ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~G-AdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvel  280 (437)
T PHA02795        203 IYKLCIPYI-EDINQLDAGGRTLLYRAIYAGYIDLVSWLLENG-ANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEI  280 (437)
T ss_pred             HHHHHHhCc-CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHH
Confidence            877777655 457788888888888888888888877777554 455667778888888888777        3578887


Q ss_pred             HHhhCC
Q 048248          241 LLHSYP  246 (316)
Q Consensus       241 Ll~~~~  246 (316)
                      |+++++
T Consensus       281 LL~~ga  286 (437)
T PHA02795        281 LLREPL  286 (437)
T ss_pred             HHhCCC
Confidence            776554


No 42 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=8.1e-26  Score=197.70  Aligned_cols=188  Identities=14%  Similarity=0.052  Sum_probs=155.8

Q ss_pred             HHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH--hCcHHHHHHHHHhccccccccccCCCcHHHHHHHh
Q 048248          121 NAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII--KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAAL  198 (316)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~--~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~  198 (316)
                      +|+..+..+++++|+..+..+.-....-..+.++.|+||.++.  .|+.++++.|++.+++ ++..  ++.||+|.|+..
T Consensus        83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GAD-In~~--~~~t~lh~A~~~  159 (437)
T PHA02795         83 LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAV-IYKI--ECLNAYFRGICK  159 (437)
T ss_pred             HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCC-CCCC--CCCCHHHHHHHc
Confidence            8888899999999999987753111111245578899999998  8999999999977754 6653  568999999999


Q ss_pred             CcHHHHHHhhcCCCCccccc-----CCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHH
Q 048248          199 GHFKIACRLSDEDDSLVYQH-----DCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVV  273 (316)
Q Consensus       199 g~~~~~~~ll~~~~~~~~~~-----d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~  273 (316)
                      ++.++++.|+..+..+.+..     +..|.||+|.|+..++.+++++|++.+ ++++.+|..|+||||+|+..|+.++++
T Consensus       160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~G-ADIN~kD~~G~TpLh~Aa~~g~~eiVe  238 (437)
T PHA02795        160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYI-EDINQLDAGGRTLLYRAIYAGYIDLVS  238 (437)
T ss_pred             CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCc-CCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence            99999999998876544332     134789999999999999999999876 457999999999999999999999999


Q ss_pred             HHhcCcccccccccCCCCCCcHHHHHHHcCC--------hhHHHHHhhcC
Q 048248          274 FILKQPEVEDLINSSDVDGNTPLHLAAINNH--------FNIILVLARNM  315 (316)
Q Consensus       274 ~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~--------~~~~~~Ll~~~  315 (316)
                      +|++.|.   .++.+|..|.||||+|+..|+        .+++++|++++
T Consensus       239 lLL~~GA---dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~g  285 (437)
T PHA02795        239 WLLENGA---NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREP  285 (437)
T ss_pred             HHHHCCC---CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCC
Confidence            9998874   478889999999999999984        68999999875


No 43 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.94  E-value=8.7e-26  Score=216.91  Aligned_cols=254  Identities=13%  Similarity=0.036  Sum_probs=175.9

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhc-CCccccccCCCChHHH-HHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH
Q 048248            4 VDHKLFRALRHGYTDKVREFARLN-GNRILGTSQNGDTALH-IAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAAR   81 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~g~t~Lh-~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~   81 (316)
                      .+.+++.|++.|+.+.++.++... +.+++..|..|+|||| .|+..++.++++.|++.+.     .+..|.||||.|+.
T Consensus        17 ~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----~~~~G~T~Lh~A~~   91 (743)
T TIGR00870        17 EEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC-----RGAVGDTLLHAISL   91 (743)
T ss_pred             HHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC-----CCCcChHHHHHHHh
Confidence            467899999999999999998652 4567788899999999 8888889999999998775     45679999999987


Q ss_pred             hCChh----HHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccc--------ccc
Q 048248           82 AGNFG----AAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNN--------KAK  149 (316)
Q Consensus        82 ~g~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~--------~~~  149 (316)
                      . ..+    ++..+..............+........|.||||+|+..++.++++.|++.|+++.....        ...
T Consensus        92 ~-~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~  170 (743)
T TIGR00870        92 E-YVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVD  170 (743)
T ss_pred             c-cHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCC
Confidence            2 223    333333322111000000000111235799999999999999999999999876642110        001


Q ss_pred             CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCc-----H----HHHHHhh---cCCCCc---
Q 048248          150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH-----F----KIACRLS---DEDDSL---  214 (316)
Q Consensus       150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~-----~----~~~~~ll---~~~~~~---  214 (316)
                      ....|.||||.|+..|+.++++.|++.+. +++.+|+.|+||||+|+..+.     .    .+...++   ......   
T Consensus       171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga-din~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el  249 (743)
T TIGR00870       171 SFYHGESPLNAAACLGSPSIVALLSEDPA-DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKEL  249 (743)
T ss_pred             cccccccHHHHHHHhCCHHHHHHHhcCCc-chhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhh
Confidence            12357899999999999999988887654 689999999999999998762     1    1222222   222111   


Q ss_pred             ccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHH
Q 048248          215 VYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQ  265 (316)
Q Consensus       215 ~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~  265 (316)
                      .+..|.+|.||||+|+..|+.++++.|++.... ..........|.+.+..
T Consensus       250 ~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~-~kk~~a~~~~~~~~~~~  299 (743)
T TIGR00870       250 EVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK-QKKFVAWPNGQQLLSLY  299 (743)
T ss_pred             hhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh-cceeeccCcchHhHhhh
Confidence            145688999999999999999999999974321 12233455666665554


No 44 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.93  E-value=1.2e-26  Score=213.70  Aligned_cols=302  Identities=19%  Similarity=0.252  Sum_probs=216.3

Q ss_pred             CCcccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHH
Q 048248            1 ESTVDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAA   80 (316)
Q Consensus         1 ~~~~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~   80 (316)
                      |.+.+.+|-.||..|+-+.++.++ ..|..++.+|+.|.+||.+|+-.||..+|+.|+.+-+.+....|..+.|+|.+||
T Consensus       754 e~n~~t~LT~acaggh~e~vellv-~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlac  832 (2131)
T KOG4369|consen  754 EPNIKTNLTSACAGGHREEVELLV-VRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLAC  832 (2131)
T ss_pred             CccccccccccccCccHHHHHHHH-HhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEec
Confidence            455788999999999999995555 5567789999999999999999999999999999988887788899999999999


Q ss_pred             HhCChhHHHHhhccCCCCCCC-------------Ccchhhhhc------------cCCCCCcHHHHHHhcCChhHHHHHH
Q 048248           81 RAGNFGAAQIFMRPHGNGNNT-------------GTFDDILRK------------RDEEGNTPLHNAVRKCDGKMAFTMI  135 (316)
Q Consensus        81 ~~g~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~------------~~~~g~t~L~~a~~~~~~~~~~~ll  135 (316)
                      ..|..+++++|+..+++..-.             +++.++++.            -.+-|-+||+.|...++...++.|+
T Consensus       833 sggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll  912 (2131)
T KOG4369|consen  833 SGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLL  912 (2131)
T ss_pred             CCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHh
Confidence            999999999999876543210             011111110            1223444555555555555555555


Q ss_pred             hhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcc
Q 048248          136 KKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLV  215 (316)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~  215 (316)
                      +.+.++..    +. ..+-.|.|-+|+..|..+++..||... ..+..+-+.|.|||+-++..|+.++-..|+..+++..
T Consensus       913 ~~gsdiNa----qI-eTNrnTaltla~fqgr~evv~lLLa~~-anvehRaktgltplme~AsgGyvdvg~~li~~gad~n  986 (2131)
T KOG4369|consen  913 QPGSDINA----QI-ETNRNTALTLALFQGRPEVVFLLLAAQ-ANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTN  986 (2131)
T ss_pred             cccchhcc----cc-ccccccceeeccccCcchHHHHHHHHh-hhhhhhcccCCcccchhhcCCccccchhhhhcccccc
Confidence            54433211    11 112346666666666666665555443 3466677778888888888888777666666554432


Q ss_pred             cccCCC-CCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCc
Q 048248          216 YQHDCN-GQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNT  294 (316)
Q Consensus       216 ~~~d~~-g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t  294 (316)
                      ...-.+ --|+|-+++..||...|+.|+. +.+.++..+++|.|+|..|+..|+..++.+|++...   +++..|..-.|
T Consensus       987 asPvp~T~dtalti~a~kGh~kfv~~lln-~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~a---d~d~qdnr~~S 1062 (2131)
T KOG4369|consen  987 ASPVPNTWDTALTIPANKGHTKFVPKLLN-GDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVA---DADQQDNRTNS 1062 (2131)
T ss_pred             cCCCCCcCCccceeecCCCchhhhHHhhC-CccceecccCCCCcccchhccCCccccchHHhhccc---Chhhhhccccc
Confidence            211122 2377888888888899888884 455678899999999999999999999999998764   35677888889


Q ss_pred             HHHHHHHcCChhHHHHHhh
Q 048248          295 PLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       295 ~L~~A~~~~~~~~~~~Ll~  313 (316)
                      +++-|.+.||++||++.+.
T Consensus      1063 ~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1063 RTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred             ccHHHHHhchhheeccccC
Confidence            9999999999999998764


No 45 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93  E-value=2.1e-25  Score=214.31  Aligned_cols=92  Identities=26%  Similarity=0.273  Sum_probs=51.7

Q ss_pred             CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC---------ChhHHHHHhcCccccc----cccc
Q 048248          221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG---------HADVVVFILKQPEVED----LINS  287 (316)
Q Consensus       221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g---------~~~~~~~Ll~~~~~~~----~~~~  287 (316)
                      .|.||||.|+..|+.+++++|++++ ++++.+|..|+||||+|+..+         ...+..+++..+....    ..+.
T Consensus       174 ~g~tpL~~Aa~~~~~~iv~lLl~~g-adin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i  252 (743)
T TIGR00870       174 HGESPLNAAACLGSPSIVALLSEDP-ADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVI  252 (743)
T ss_pred             ccccHHHHHHHhCCHHHHHHHhcCC-cchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhh
Confidence            4666666666666666666666543 345666666666666666654         1223333433322111    1134


Q ss_pred             CCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248          288 SDVDGNTPLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       288 ~d~~g~t~L~~A~~~~~~~~~~~Ll~  313 (316)
                      .|.+|.||||+|+..|+.+++++|++
T Consensus       253 ~N~~g~TPL~~A~~~g~~~l~~lLL~  278 (743)
T TIGR00870       253 LNHQGLTPLKLAAKEGRIVLFRLKLA  278 (743)
T ss_pred             cCCCCCCchhhhhhcCCccHHHHHHH
Confidence            45666666666666666666666665


No 46 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.93  E-value=2e-25  Score=172.06  Aligned_cols=249  Identities=19%  Similarity=0.195  Sum_probs=160.3

Q ss_pred             cHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC
Q 048248            5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      -..++.+...|..+..+.+.......   ++..|..-+--+.+.++.+++...+...+..+.-++.+|+..++.++-.++
T Consensus        32 ~a~~~~~~~m~~t~p~~~l~~~~s~~---~~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s  108 (296)
T KOG0502|consen   32 IAELFEQVEMGTTEPRCALTAEISAL---RNALGESLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGS  108 (296)
T ss_pred             HHHHHHHhhccccchhHHHHHHHHHH---HHhcCCcccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCC
Confidence            34556666666666655554433222   234677777777788887777777766655555567778888888888887


Q ss_pred             hhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHh
Q 048248           85 FGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIK  164 (316)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~  164 (316)
                      ...+...+..+..++.          .+.-+++|+.+++.....+....+...        -.+..|..|+|||++|+.+
T Consensus       109 ~~k~sttltN~~rgne----------vs~~p~s~~slsVhql~L~~~~~~~~n--------~VN~~De~GfTpLiWAaa~  170 (296)
T KOG0502|consen  109 VDKVSTTLTNGARGNE----------VSLMPWSPLSLSVHQLHLDVVDLLVNN--------KVNACDEFGFTPLIWAAAK  170 (296)
T ss_pred             cceeeeeecccccCCc----------cccccCChhhHHHHHHHHHHHHHHhhc--------cccCccccCchHhHHHHhc
Confidence            7777777766554432          345667777777765544433332221        1233456677777777777


Q ss_pred             CcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhh
Q 048248          165 SQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHS  244 (316)
Q Consensus       165 ~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~  244 (316)
                      |++.+|+.||+.+. +++..-++..++|.+|+..|+.++++.|+.+.. ++|..|-+|-|||.+|++.+|.+|++.|++.
T Consensus       171 G~i~vV~fLL~~GA-dp~~lgk~resALsLAt~ggytdiV~lLL~r~v-dVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s  248 (296)
T KOG0502|consen  171 GHIPVVQFLLNSGA-DPDALGKYRESALSLATRGGYTDIVELLLTREV-DVNVYDWNGGTPLLYAVRGNHVKCVESLLNS  248 (296)
T ss_pred             CchHHHHHHHHcCC-ChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCC-CcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence            77777777666554 466666677777777777777777776665544 3456677777777777777777777777765


Q ss_pred             CCCCccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          245 YPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       245 ~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      +.. ++..+..|.+++..|+..|+. +|+..++.
T Consensus       249 GAd-~t~e~dsGy~~mdlAValGyr-~Vqqvie~  280 (296)
T KOG0502|consen  249 GAD-VTQEDDSGYWIMDLAVALGYR-IVQQVIEK  280 (296)
T ss_pred             CCC-cccccccCCcHHHHHHHhhhH-HHHHHHHH
Confidence            443 567777777777777777776 55555543


No 47 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.92  E-value=1.6e-25  Score=172.57  Aligned_cols=233  Identities=23%  Similarity=0.208  Sum_probs=192.6

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF   85 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~   85 (316)
                      +.+-.+...|+.+..+....-....+..++..|++++|.++-+++.+.+..++.++..- +..+..+++|+.+++.+-++
T Consensus        64 ~~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rg-nevs~~p~s~~slsVhql~L  142 (296)
T KOG0502|consen   64 SLLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARG-NEVSLMPWSPLSLSVHQLHL  142 (296)
T ss_pred             cccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccC-CccccccCChhhHHHHHHHH
Confidence            33445667788888877665555556778888999999999999999999999887764 44667899999999999888


Q ss_pred             hHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC
Q 048248           86 GAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS  165 (316)
Q Consensus        86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~  165 (316)
                      +.+..+.+.            .++..|+.|.|||.+|++.|...++++|+..|+++.      .-.+...|+|++|++.|
T Consensus       143 ~~~~~~~~n------------~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~------~lgk~resALsLAt~gg  204 (296)
T KOG0502|consen  143 DVVDLLVNN------------KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPD------ALGKYRESALSLATRGG  204 (296)
T ss_pred             HHHHHHhhc------------cccCccccCchHhHHHHhcCchHHHHHHHHcCCChh------hhhhhhhhhHhHHhcCC
Confidence            877776653            366779999999999999999999999999988763      22445679999999999


Q ss_pred             cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhC
Q 048248          166 QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSY  245 (316)
Q Consensus       166 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~  245 (316)
                      ..++|+.||.+..+ +|.-|-+|.|||-||+..++.++++.|+..++ ++++.+..|++++-.|+..|+. +|+..+++.
T Consensus       205 ytdiV~lLL~r~vd-VNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA-d~t~e~dsGy~~mdlAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  205 YTDIVELLLTREVD-VNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA-DVTQEDDSGYWIMDLAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             hHHHHHHHHhcCCC-cceeccCCCceeeeeecCChHHHHHHHHhcCC-CcccccccCCcHHHHHHHhhhH-HHHHHHHHH
Confidence            99999999988764 89999999999999999999999999997765 4677899999999999999998 888888875


Q ss_pred             CCCccccccCCCcHHH
Q 048248          246 PDSIEFIDNKNRNILH  261 (316)
Q Consensus       246 ~~~~~~~d~~g~tpLh  261 (316)
                      .. ....|..-++|+|
T Consensus       282 ~l-kl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  282 AL-KLCQDSEKRTPLH  296 (296)
T ss_pred             HH-HHhhcccCCCCCC
Confidence            43 3556666666664


No 48 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91  E-value=1.8e-23  Score=202.22  Aligned_cols=174  Identities=18%  Similarity=0.214  Sum_probs=119.5

Q ss_pred             CCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHH
Q 048248          114 EGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLR  193 (316)
Q Consensus       114 ~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh  193 (316)
                      ++.++|+.|+..|+.++++.|+..+.++      +..+..|.||||+|+..|+.++++.|+..+ .+++.+|.+|+||||
T Consensus       524 ~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~------n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~g-adin~~d~~G~TpL~  596 (823)
T PLN03192        524 NMASNLLTVASTGNAALLEELLKAKLDP------DIGDSKGRTPLHIAASKGYEDCVLVLLKHA-CNVHIRDANGNTALW  596 (823)
T ss_pred             cchhHHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcChHHHHHHHHhcC-CCCCCcCCCCCCHHH
Confidence            4556777777777777777777766553      234556777777777777777777766654 446777777777777


Q ss_pred             HHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHH
Q 048248          194 YAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVV  273 (316)
Q Consensus       194 ~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~  273 (316)
                      +|+..|+.++++.|+..... .  ....|.+|||.|+..|+.++++.|++.+. +++.+|.+|+||||+|+..|+.++++
T Consensus       597 ~A~~~g~~~iv~~L~~~~~~-~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Ga-din~~d~~G~TpLh~A~~~g~~~iv~  672 (823)
T PLN03192        597 NAISAKHHKIFRILYHFASI-S--DPHAAGDLLCTAAKRNDLTAMKELLKQGL-NVDSEDHQGATALQVAMAEDHVDMVR  672 (823)
T ss_pred             HHHHhCCHHHHHHHHhcCcc-c--CcccCchHHHHHHHhCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence            77777777777777654332 1  22345677777777777777777776644 45777777777777777777777777


Q ss_pred             HHhcCcccccccccCCCCC-CcHHHHHHH
Q 048248          274 FILKQPEVEDLINSSDVDG-NTPLHLAAI  301 (316)
Q Consensus       274 ~Ll~~~~~~~~~~~~d~~g-~t~L~~A~~  301 (316)
                      +|++.+..   ++..|..| .||++++..
T Consensus       673 ~Ll~~GAd---v~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        673 LLIMNGAD---VDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHHcCCC---CCCCCCCCCCCHHHHHHH
Confidence            77776542   45556666 777776644


No 49 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.91  E-value=1.2e-23  Score=203.31  Aligned_cols=158  Identities=24%  Similarity=0.260  Sum_probs=139.2

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  230 (316)
                      +....++||.|+..|+.+.++.|+..+. +++.+|..|+||||+|+..|+.++++.|+.. +.+++.+|.+|+||||+|+
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~-gadin~~d~~G~TpL~~A~  599 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAKL-DPDIGDSKGRTPLHIAASKGYEDCVLVLLKH-ACNVHIRDANGNTALWNAI  599 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcChHHHHHHHHhc-CCCCCCcCCCCCCHHHHHH
Confidence            3356799999999999999999997764 5899999999999999999999999988875 5567789999999999999


Q ss_pred             hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 048248          231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILV  310 (316)
Q Consensus       231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~  310 (316)
                      ..|+.+++++|+..+..   .....|.+|||+|+..|+.+++++|++.+.   .++.+|.+|+||||+|+..|+.+++++
T Consensus       600 ~~g~~~iv~~L~~~~~~---~~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Ga---din~~d~~G~TpLh~A~~~g~~~iv~~  673 (823)
T PLN03192        600 SAKHHKIFRILYHFASI---SDPHAAGDLLCTAAKRNDLTAMKELLKQGL---NVDSEDHQGATALQVAMAEDHVDMVRL  673 (823)
T ss_pred             HhCCHHHHHHHHhcCcc---cCcccCchHHHHHHHhCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHCCcHHHHHH
Confidence            99999999999965432   234568899999999999999999998864   478899999999999999999999999


Q ss_pred             HhhcCC
Q 048248          311 LARNMS  316 (316)
Q Consensus       311 Ll~~~~  316 (316)
                      |+++++
T Consensus       674 Ll~~GA  679 (823)
T PLN03192        674 LIMNGA  679 (823)
T ss_pred             HHHcCC
Confidence            999764


No 50 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.91  E-value=7.9e-24  Score=189.32  Aligned_cols=242  Identities=22%  Similarity=0.249  Sum_probs=177.8

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCC------------ccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCC
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGN------------RILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHK   71 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~------------~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~   71 (316)
                      ++..+..|++.|+.+.+..++...+.            ..+..|.+|.|+||.||..|+..+++.|++..+-. .+.+..
T Consensus         3 k~qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~l-dl~d~k   81 (854)
T KOG0507|consen    3 KKQELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALL-DLCDTK   81 (854)
T ss_pred             hhhhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhh-hhhhcc
Confidence            45678899999999999888864321            23445779999999999999999999999987754 456689


Q ss_pred             CCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCC
Q 048248           72 SETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQG  151 (316)
Q Consensus        72 g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~  151 (316)
                      |.+|||+|++.|+.+++++++....          .++.....|.||||.|+++|+.+++.+|+..+.+...      .+
T Consensus        82 g~~plhlaaw~g~~e~vkmll~q~d----------~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i------~n  145 (854)
T KOG0507|consen   82 GILPLHLAAWNGNLEIVKMLLLQTD----------ILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFI------RN  145 (854)
T ss_pred             CcceEEehhhcCcchHHHHHHhccc----------CCCcccccCcCccchhhhhcchHHHHHHHhcCCCccc------cC
Confidence            9999999999999999999997542          2445577899999999999999999999999877643      35


Q ss_pred             CCCchHHHHHHHhCcHHHHHHHHHhcccc-------ccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCc
Q 048248          152 PNNLTLLHSAIIKSQFVVMAKILEAKRDL-------INVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQS  224 (316)
Q Consensus       152 ~~~~t~lh~A~~~~~~~~~~~ll~~~~~~-------~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~t  224 (316)
                      +++.|+|-+|+..|..++++.|+...-..       -..++-.+-+|||.|++.|+.++++.|+..+-+ ++.....| |
T Consensus       146 ns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~d-in~~t~~g-t  223 (854)
T KOG0507|consen  146 NSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFD-INYTTEDG-T  223 (854)
T ss_pred             cccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCC-cccccccc-h
Confidence            56789999999999999998888752100       011233456667777777777776666654433 33333334 6


Q ss_pred             HHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHH
Q 048248          225 PLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQ  265 (316)
Q Consensus       225 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~  265 (316)
                      +||-|+..|..++|.+|++.+.. ...++.+|+|.|.+-..
T Consensus       224 alheaalcgk~evvr~ll~~gin-~h~~n~~~qtaldil~d  263 (854)
T KOG0507|consen  224 ALHEAALCGKAEVVRFLLEIGIN-THIKNQHGQTALDIIID  263 (854)
T ss_pred             hhhhHhhcCcchhhhHHHhhccc-cccccccchHHHHHHHh
Confidence            77777777777777777765433 46666677777655443


No 51 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.91  E-value=5.8e-24  Score=175.39  Aligned_cols=163  Identities=20%  Similarity=0.292  Sum_probs=98.1

Q ss_pred             hhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHh-----CcHHHHHHHHHhcccccc
Q 048248          108 LRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIK-----SQFVVMAKILEAKRDLIN  182 (316)
Q Consensus       108 ~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~-----~~~~~~~~ll~~~~~~~~  182 (316)
                      ++..|.+|+|+|||++.+.+.+++..|++.+...+     ..+++-|+||+++++..     .+..+|..|...+  ++|
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~V-----D~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg--nVN  333 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDV-----DQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG--DVN  333 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccc-----cccccccccHHHHHHHHhhcchhhHHHHHHHHhcc--Ccc
Confidence            34456666666666666666666666666654433     23444566666665532     3345555555443  245


Q ss_pred             cccc-CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHH
Q 048248          183 VRDE-RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILH  261 (316)
Q Consensus       183 ~~d~-~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh  261 (316)
                      .+-+ .|.|+|++|+.+|..++++.||.. ++++|..|.+|.|+|++||..||.||+++||....+++...|.+|.|+|.
T Consensus       334 aKAsQ~gQTALMLAVSHGr~d~vk~LLac-gAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~  412 (452)
T KOG0514|consen  334 AKASQHGQTALMLAVSHGRVDMVKALLAC-GADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALS  412 (452)
T ss_pred             hhhhhhcchhhhhhhhcCcHHHHHHHHHc-cCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhh
Confidence            5433 466666666666666666666643 33455566666666666666666666666666655566666666666666


Q ss_pred             HHHHcCChhHHHHHhcC
Q 048248          262 LAAQNGHADVVVFILKQ  278 (316)
Q Consensus       262 ~A~~~g~~~~~~~Ll~~  278 (316)
                      +|...|+.||..+|+.+
T Consensus       413 IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  413 IALEAGHREIAVMLYAH  429 (452)
T ss_pred             hHHhcCchHHHHHHHHH
Confidence            66666666666666644


No 52 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90  E-value=6.4e-24  Score=175.15  Aligned_cols=162  Identities=26%  Similarity=0.376  Sum_probs=141.0

Q ss_pred             ccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHH-----hCcHHHHHHhhcCCCCcccccCCCC
Q 048248          148 AKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAA-----LGHFKIACRLSDEDDSLVYQHDCNG  222 (316)
Q Consensus       148 ~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~-----~g~~~~~~~ll~~~~~~~~~~d~~g  222 (316)
                      +..|.+|.|+||||+.++++++|+.||+.+.++++.+|+-|.||+++|+-     ..+.++|..|+..+.... ....-|
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNa-KAsQ~g  340 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNA-KASQHG  340 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcch-hhhhhc
Confidence            34577899999999999999999999999999999999999999999875     244678888886654332 234579


Q ss_pred             CcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHc
Q 048248          223 QSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       223 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~  302 (316)
                      +|+|++|+..|..++|+.||..+ +++|..|.+|.|+|+.||+.||.+++.+||..+.+.  +...|.+|.|+|.+|-..
T Consensus       341 QTALMLAVSHGr~d~vk~LLacg-AdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd--~sLtD~DgSTAl~IAlea  417 (452)
T KOG0514|consen  341 QTALMLAVSHGRVDMVKALLACG-ADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCD--ISLTDVDGSTALSIALEA  417 (452)
T ss_pred             chhhhhhhhcCcHHHHHHHHHcc-CCCccccCCccHHHhhhhhhChHHHHHHHhccCccc--ceeecCCCchhhhhHHhc
Confidence            99999999999999999999765 568999999999999999999999999999998765  567899999999999999


Q ss_pred             CChhHHHHHhh
Q 048248          303 NHFNIILVLAR  313 (316)
Q Consensus       303 ~~~~~~~~Ll~  313 (316)
                      ||.+|.-+|--
T Consensus       418 gh~eIa~mlYa  428 (452)
T KOG0514|consen  418 GHREIAVMLYA  428 (452)
T ss_pred             CchHHHHHHHH
Confidence            99999877743


No 53 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.90  E-value=3.6e-23  Score=185.17  Aligned_cols=240  Identities=22%  Similarity=0.241  Sum_probs=194.8

Q ss_pred             hHHHHHHHhCCHHHHHHHHhcCC------------CccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhh
Q 048248           40 TALHIAARFGHEILVMEILKHQS------------DLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDI  107 (316)
Q Consensus        40 t~Lh~A~~~~~~~~v~~Ll~~~~------------~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~  107 (316)
                      +-|--||+.|..+.|..||+...            ...+..|.+|.|.||.|+..|+..++++|++..+          .
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea----------~   74 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEA----------L   74 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchh----------h
Confidence            44667899999999999997521            1234567789999999999999999999997533          2


Q ss_pred             hhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccC
Q 048248          108 LRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDER  187 (316)
Q Consensus       108 ~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~  187 (316)
                      +...|..|++|||+|++.|+.++++.++.++...      +.....|.||||.|+..|+++++.+|+..+. +.-.+|+.
T Consensus        75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~------na~~~e~~tplhlaaqhgh~dvv~~Ll~~~a-dp~i~nns  147 (854)
T KOG0507|consen   75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDIL------NAVNIENETPLHLAAQHGHLEVVFYLLKKNA-DPFIRNNS  147 (854)
T ss_pred             hhhhhccCcceEEehhhcCcchHHHHHHhcccCC------CcccccCcCccchhhhhcchHHHHHHHhcCC-CccccCcc
Confidence            4456789999999999999999999999987332      3455578999999999999999999987765 47889999


Q ss_pred             CCcHHHHHHHhCcHHHHHHhhcCCCCc-------ccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHH
Q 048248          188 NRNPLRYAAALGHFKIACRLSDEDDSL-------VYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNIL  260 (316)
Q Consensus       188 g~tpLh~A~~~g~~~~~~~ll~~~~~~-------~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL  260 (316)
                      +.|+|-.|++-|..+++..|+...-..       ...++-.+.+|||+|+++||.++++.|++.+- +++....+ .|+|
T Consensus       148 ~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~-din~~t~~-gtal  225 (854)
T KOG0507|consen  148 KETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF-DINYTTED-GTAL  225 (854)
T ss_pred             cccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC-Cccccccc-chhh
Confidence            999999999999999888887652111       12355678899999999999999999998754 45766655 4899


Q ss_pred             HHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHH
Q 048248          261 HLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAI  301 (316)
Q Consensus       261 h~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~  301 (316)
                      |-|+-.|..++|.+|++.+..   .+.+|.+|+|+|.+-..
T Consensus       226 heaalcgk~evvr~ll~~gin---~h~~n~~~qtaldil~d  263 (854)
T KOG0507|consen  226 HEAALCGKAEVVRFLLEIGIN---THIKNQHGQTALDIIID  263 (854)
T ss_pred             hhHhhcCcchhhhHHHhhccc---cccccccchHHHHHHHh
Confidence            999999999999999988643   56788999999876543


No 54 
>PHA02741 hypothetical protein; Provisional
Probab=99.90  E-value=5.9e-23  Score=161.67  Aligned_cols=128  Identities=23%  Similarity=0.339  Sum_probs=69.1

Q ss_pred             ccccCCCcHHHHHHHhCcHHHHHHhhcC-----CCCcccccCCCCCcHHHHHHhcCC----HhHHHHHHhhCCCCccccc
Q 048248          183 VRDERNRNPLRYAAALGHFKIACRLSDE-----DDSLVYQHDCNGQSPLHLASQNGQ----LSILENLLHSYPDSIEFID  253 (316)
Q Consensus       183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~-----~~~~~~~~d~~g~tpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d  253 (316)
                      .+|..|.||||+|++.|+.++++.|+..     .+.+.+.+|..|+||||+|+..|+    .+++++|++.+ .+++.++
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adin~~~   94 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADINAQE   94 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCCCCCC
Confidence            3455566666666666665555554321     123344555556666666666655    35555555443 2345555


Q ss_pred             c-CCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248          254 N-KNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       254 ~-~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~  313 (316)
                      . .|+||||+|+..++.+++++|+....  ..++..|.+|+||||+|+..++.+++++|++
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g--~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~  153 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPG--IDLHFCNADNKSPFELAIDNEDVAMMQILRE  153 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCC--CCCCcCCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            3 56666666666666666666654311  1244455556666666666666666666554


No 55 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.89  E-value=2.1e-23  Score=192.54  Aligned_cols=262  Identities=20%  Similarity=0.207  Sum_probs=217.0

Q ss_pred             CCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCC
Q 048248           36 QNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEG  115 (316)
Q Consensus        36 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g  115 (316)
                      .+-.|+|..||..||.++|..|+..|++. .-+|..|.+||.+|+..|+..+++.|+..+++..         ...|+.+
T Consensus       755 ~n~~t~LT~acaggh~e~vellv~rgani-ehrdkkgf~plImaatagh~tvV~~llk~ha~ve---------aQsdrtk  824 (2131)
T KOG4369|consen  755 PNIKTNLTSACAGGHREEVELLVVRGANI-EHRDKKGFVPLIMAATAGHITVVQDLLKAHADVE---------AQSDRTK  824 (2131)
T ss_pred             ccccccccccccCccHHHHHHHHHhcccc-cccccccchhhhhhcccCchHHHHHHHhhhhhhh---------hhccccc
Confidence            46689999999999999999999999874 5688999999999999999999999998776532         3468999


Q ss_pred             CcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccc--ccCCCcHHH
Q 048248          116 NTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVR--DERNRNPLR  193 (316)
Q Consensus       116 ~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~--d~~g~tpLh  193 (316)
                      .|+|.+|+..|..++++.|+..+....      .++...+|||.+|..-|..+++..||..+. .+|.+  .+.|-.||+
T Consensus       825 dt~lSlacsggr~~vvelLl~~ganke------hrnvsDytPlsla~Sggy~~iI~~llS~Gs-eInSrtgSklgisPLm  897 (2131)
T KOG4369|consen  825 DTMLSLACSGGRTRVVELLLNAGANKE------HRNVSDYTPLSLARSGGYTKIIHALLSSGS-EINSRTGSKLGISPLM  897 (2131)
T ss_pred             CceEEEecCCCcchHHHHHHHhhcccc------ccchhhcCchhhhcCcchHHHHHHHhhccc-ccccccccccCcchhh
Confidence            999999999999999999999876542      234456799999999999999988887664 46655  457999999


Q ss_pred             HHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHH
Q 048248          194 YAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVV  273 (316)
Q Consensus       194 ~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~  273 (316)
                      +|...|+...+..|++.+.++.-..--+-+|+|-+|+..|..++|..||... ..+..+-+.|-|||+-++..|.+|+-.
T Consensus       898 latmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~-anvehRaktgltplme~AsgGyvdvg~  976 (2131)
T KOG4369|consen  898 LATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQ-ANVEHRAKTGLTPLMEMASGGYVDVGN  976 (2131)
T ss_pred             hhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHh-hhhhhhcccCCcccchhhcCCccccch
Confidence            9999999998888888776665444456679999999999999999888754 446788889999999999999999999


Q ss_pred             HHhcCccccc--------------------------------ccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          274 FILKQPEVED--------------------------------LINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       274 ~Ll~~~~~~~--------------------------------~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      +|+..|....                                .+..+|++|.|+|-+|+..|+...|.+|++..
T Consensus       977 ~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ 1050 (2131)
T KOG4369|consen  977 LLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSV 1050 (2131)
T ss_pred             hhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcc
Confidence            9987653211                                13456889999999999999999999998754


No 56 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.89  E-value=1.6e-22  Score=174.98  Aligned_cols=228  Identities=22%  Similarity=0.257  Sum_probs=169.2

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCCh
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNF   85 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~   85 (316)
                      -.++.|+..|+.+.++.|+..+ ..++..+.+|.|+||-+|.-.+.+||++|++.++++ +..|..||||||.|+..|+.
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~g-a~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~V-n~~d~e~wtPlhaaascg~~  119 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNRG-ASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANV-NAQDNEGWTPLHAAASCGYL  119 (527)
T ss_pred             HHHHhccccccHHHHHHHhccC-CCccccCCccchhHHHHHhcccHHHHHHHHHhcCCc-cccccccCCcchhhcccccH
Confidence            3567899999999999998766 456888999999999999999999999999999885 66889999999999999999


Q ss_pred             hHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC
Q 048248           86 GAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS  165 (316)
Q Consensus        86 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~  165 (316)
                      .++.+|+..+++          +...+.+|..|+-.+...-..+++...+...               |.+  .-|++..
T Consensus       120 ~i~~~li~~gA~----------~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~---------------gi~--iea~R~~  172 (527)
T KOG0505|consen  120 NIVEYLIQHGAN----------LLAVNSDGNMPYDLAEDEATLDVLETEMARQ---------------GID--IEAARKA  172 (527)
T ss_pred             HHHHHHHHhhhh----------hhhccCCCCCccccccCcchhHHHHHHHHHh---------------ccc--HHHHhhh
Confidence            999999987654          2234566666665554333333333322221               111  1111111


Q ss_pred             c----HHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHH
Q 048248          166 Q----FVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENL  241 (316)
Q Consensus       166 ~----~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L  241 (316)
                      -    +.-+...+. .+...++++..|.|.||.|+..|+.++...|+..+.. ++.+|.+||||||.|+..|+.+++++|
T Consensus       173 ~e~~ml~D~~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~~~elL  250 (527)
T KOG0505|consen  173 EEQTMLDDARQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQEDACELL  250 (527)
T ss_pred             hHHHHHHHHHHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHhHHHHH
Confidence            1    111223333 3445677777799999999999999988888766554 567899999999999999999999988


Q ss_pred             HhhCCCCccccccCCCcHHHHHHH
Q 048248          242 LHSYPDSIEFIDNKNRNILHLAAQ  265 (316)
Q Consensus       242 l~~~~~~~~~~d~~g~tpLh~A~~  265 (316)
                      +++++. .+.+...|.||+-+|..
T Consensus       251 ~~~ga~-~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  251 VEHGAD-MDAKTKMGETPLDVADE  273 (527)
T ss_pred             HHhhcc-cchhhhcCCCCccchhh
Confidence            877654 68888999999988876


No 57 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.88  E-value=1.9e-22  Score=156.62  Aligned_cols=131  Identities=18%  Similarity=0.200  Sum_probs=74.8

Q ss_pred             cccccCCCcHHHHHHHhCcHHHHHHhh----cCCCCcccccCCCCCcHHHHHHhcCCHh---HHHHHHhhCCCCccccc-
Q 048248          182 NVRDERNRNPLRYAAALGHFKIACRLS----DEDDSLVYQHDCNGQSPLHLASQNGQLS---ILENLLHSYPDSIEFID-  253 (316)
Q Consensus       182 ~~~d~~g~tpLh~A~~~g~~~~~~~ll----~~~~~~~~~~d~~g~tpLh~A~~~g~~~---iv~~Ll~~~~~~~~~~d-  253 (316)
                      +.+|.+|.||||+|+..|+...+..+.    ...+.....+|.+|.||||+|+..|+.+   ++++|++.+. +++.++ 
T Consensus        11 ~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga-din~~~~   89 (154)
T PHA02736         11 SEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA-DINGKER   89 (154)
T ss_pred             HhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCC-CccccCC
Confidence            344555666666666666521111110    0111112334666777777777666653   4566665543 456665 


Q ss_pred             cCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          254 NKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       254 ~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      ..|+||||+|+..|+.+++++|+....  ..++.+|..|.||||+|+..++.+++++|++++
T Consensus        90 ~~g~T~Lh~A~~~~~~~i~~~Ll~~~g--~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~g  149 (154)
T PHA02736         90 VFGNTPLHIAVYTQNYELATWLCNQPG--VNMEILNYAFKTPYYVACERHDAKMMNILRAKG  149 (154)
T ss_pred             CCCCcHHHHHHHhCCHHHHHHHHhCCC--CCCccccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            367777777777777777777765321  224566667777777777777777777776654


No 58 
>PHA02741 hypothetical protein; Provisional
Probab=99.88  E-value=1e-21  Score=154.59  Aligned_cols=129  Identities=17%  Similarity=0.219  Sum_probs=107.4

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHh-----ccccccccccCCCcHHHHHHHhCc----HHHHHHhhcCCCCcccccCC-
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEA-----KRDLINVRDERNRNPLRYAAALGH----FKIACRLSDEDDSLVYQHDC-  220 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~-----~~~~~~~~d~~g~tpLh~A~~~g~----~~~~~~ll~~~~~~~~~~d~-  220 (316)
                      +..|.||||+|+..|+.++++.|+..     .+..++.+|..|+||||+|+..|+    .++++.|+..+ .+++.++. 
T Consensus        18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g-adin~~~~~   96 (169)
T PHA02741         18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELG-ADINAQEML   96 (169)
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcC-CCCCCCCcC
Confidence            44678999999999999888887542     235578899999999999999998    46777777654 45566674 


Q ss_pred             CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248          221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE  280 (316)
Q Consensus       221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~  280 (316)
                      .|+||||+|+..++.+++++|+...+..++.+|..|+||||+|+..|+.+++++|++...
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            899999999999999999999975455678899999999999999999999999998753


No 59 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.87  E-value=2.1e-21  Score=152.18  Aligned_cols=140  Identities=11%  Similarity=0.122  Sum_probs=99.9

Q ss_pred             CCCCCchHHHHHHHhCcHHHHHHH---HHhccccccccccCCCcHHHHHHHhCcHHH---HHHhhcCCCCcccccC-CCC
Q 048248          150 QGPNNLTLLHSAIIKSQFVVMAKI---LEAKRDLINVRDERNRNPLRYAAALGHFKI---ACRLSDEDDSLVYQHD-CNG  222 (316)
Q Consensus       150 ~~~~~~t~lh~A~~~~~~~~~~~l---l~~~~~~~~~~d~~g~tpLh~A~~~g~~~~---~~~ll~~~~~~~~~~d-~~g  222 (316)
                      .+..+.+++|.|++.|+.+.++.+   +...+..++.+|..|+||||+|+..|..+.   ++.|+..+ .+++.++ ..|
T Consensus        16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-adin~~d~~~g   94 (166)
T PHA02743         16 IDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-ADINARELGTG   94 (166)
T ss_pred             hccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CCCCCCCCCCC
Confidence            345667888888888887443332   223344567788888888888888877543   55666544 4556666 478


Q ss_pred             CcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCC
Q 048248          223 QSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGN  293 (316)
Q Consensus       223 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~  293 (316)
                      .||||+|+..|+.+++++|+...+..++.++..|+||||+|+..++.+++++|+..+..   ++.++..|.
T Consensus        95 ~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~---~~~~~~~~~  162 (166)
T PHA02743         95 NTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAV---CDDPLSIGL  162 (166)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcccCCc
Confidence            88888888888888888888544455678888888888888888888888888887643   455555554


No 60 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.86  E-value=1e-20  Score=148.31  Aligned_cols=131  Identities=18%  Similarity=0.202  Sum_probs=95.8

Q ss_pred             cccccccCCCcHHHHHHHhCcHH----HHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhH---HHHHHhhCCCCcccc
Q 048248          180 LINVRDERNRNPLRYAAALGHFK----IACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSI---LENLLHSYPDSIEFI  252 (316)
Q Consensus       180 ~~~~~d~~g~tpLh~A~~~g~~~----~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~i---v~~Ll~~~~~~~~~~  252 (316)
                      +++..+.++.+++|.|++.|+.+    +++.|+ ..+...+.+|..|+||||+|+..|+.++   +++|++.+ ..++.+
T Consensus        12 ~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~-~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G-adin~~   89 (166)
T PHA02743         12 GAVEIDEDEQNTFLRICRTGNIYELMEVAPFIS-GDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMG-ADINAR   89 (166)
T ss_pred             HHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHh-hcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcC-CCCCCC
Confidence            34556677788888888888763    333333 3444556678888888888888877654   67777654 456777


Q ss_pred             c-cCCCcHHHHHHHcCChhHHHHHhc-CcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248          253 D-NKNRNILHLAAQNGHADVVVFILK-QPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       253 d-~~g~tpLh~A~~~g~~~~~~~Ll~-~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      + ..|+||||+|+..|+.+++++|+. .+   ..++.+|..|+||||+|+..++.+++++|++.+
T Consensus        90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~g---ad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~g  151 (166)
T PHA02743         90 ELGTGNTLLHIAASTKNYELAEWLCRQLG---VNLGAINYQHETAYHIAYKMRDRRMMEILRANG  151 (166)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhccC---CCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence            7 478888888888888888888884 43   235667888888888888888888888888765


No 61 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.85  E-value=4.3e-21  Score=148.98  Aligned_cols=129  Identities=12%  Similarity=0.109  Sum_probs=92.2

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHh----ccccccccccCCCcHHHHHHHhCcHH---HHHHhhcCCCCcccccC-CCC
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEA----KRDLINVRDERNRNPLRYAAALGHFK---IACRLSDEDDSLVYQHD-CNG  222 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~----~~~~~~~~d~~g~tpLh~A~~~g~~~---~~~~ll~~~~~~~~~~d-~~g  222 (316)
                      +..|.||||+|+..|+...+......    .+..++.+|.+|.||||+|+..|+.+   +++.|+..+ .+++.++ ..|
T Consensus        14 d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g-adin~~~~~~g   92 (154)
T PHA02736         14 DIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWG-ADINGKERVFG   92 (154)
T ss_pred             CCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcC-CCccccCCCCC
Confidence            44566666666666653211111100    01113456888999999999988764   456666555 4566676 489


Q ss_pred             CcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248          223 QSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE  280 (316)
Q Consensus       223 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~  280 (316)
                      +||||+|+..|+.+++++|+...+.+++.+|..|+||||+|+..|+.+++++|+..+.
T Consensus        93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         93 NTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            9999999999999999999875456678889999999999999999999999988764


No 62 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.85  E-value=6.8e-21  Score=164.99  Aligned_cols=229  Identities=19%  Similarity=0.213  Sum_probs=170.5

Q ss_pred             HHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHH
Q 048248           41 ALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLH  120 (316)
Q Consensus        41 ~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  120 (316)
                      .+.-||..|..+-|..|+..++.. +..+-+|.|+||-|+...+.++++++++.+++          ++..|.+||||||
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~-~~~n~DglTalhq~~id~~~e~v~~l~e~ga~----------Vn~~d~e~wtPlh  111 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASP-NLCNVDGLTALHQACIDDNLEMVKFLVENGAN----------VNAQDNEGWTPLH  111 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCc-cccCCccchhHHHHHhcccHHHHHHHHHhcCC----------ccccccccCCcch
Confidence            356677889999999999988775 66788999999999999999999999987665          4557999999999


Q ss_pred             HHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH---H
Q 048248          121 NAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA---A  197 (316)
Q Consensus       121 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~---~  197 (316)
                      -|+..++..++++++..++.....      +.+|..|+-.+.......++.......+          -+ +-.+=   .
T Consensus       112 aaascg~~~i~~~li~~gA~~~av------Nsdg~~P~dl~e~ea~~~~l~~~~~r~g----------i~-iea~R~~~e  174 (527)
T KOG0505|consen  112 AAASCGYLNIVEYLIQHGANLLAV------NSDGNMPYDLAEDEATLDVLETEMARQG----------ID-IEAARKAEE  174 (527)
T ss_pred             hhcccccHHHHHHHHHhhhhhhhc------cCCCCCccccccCcchhHHHHHHHHHhc----------cc-HHHHhhhhH
Confidence            999999999999999998876432      2244556655544333333322222211          11 11111   1


Q ss_pred             hCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhc
Q 048248          198 LGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILK  277 (316)
Q Consensus       198 ~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~  277 (316)
                      +-..+-+...+. .+......+..|.|.||.|+..|..++.++|+..+.. ++.+|.+||||||.|+.+|..+++++|+.
T Consensus       175 ~~ml~D~~q~l~-~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~-~~~~D~dgWtPlHAAA~Wg~~~~~elL~~  252 (527)
T KOG0505|consen  175 QTMLDDARQWLN-AGAELDARHARGATALHVAAANGYTEVAALLLQAGYS-VNIKDYDGWTPLHAAAHWGQEDACELLVE  252 (527)
T ss_pred             HHHHHHHHHHHh-ccccccccccccchHHHHHHhhhHHHHHHHHHHhccC-cccccccCCCcccHHHHhhhHhHHHHHHH
Confidence            111222333333 4444555666699999999999999999999987654 69999999999999999999999999998


Q ss_pred             CcccccccccCCCCCCcHHHHHHHc
Q 048248          278 QPEVEDLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       278 ~~~~~~~~~~~d~~g~t~L~~A~~~  302 (316)
                      ++..   .+.....|.||+.+|...
T Consensus       253 ~ga~---~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  253 HGAD---MDAKTKMGETPLDVADEE  274 (527)
T ss_pred             hhcc---cchhhhcCCCCccchhhh
Confidence            8754   456677899999998653


No 63 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.85  E-value=2e-20  Score=139.27  Aligned_cols=145  Identities=23%  Similarity=0.266  Sum_probs=121.6

Q ss_pred             hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      -.+..|+..+.+..|+.||...+..+|.+|.+|.||||.|+.+|+.+++..|+..++. .+.+...||||||.||...+.
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn-~~a~T~~GWTPLhSAckWnN~  143 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGAN-KEAKTNEGWTPLHSACKWNNF  143 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCC-cccccccCccchhhhhcccch
Confidence            3466788888899999999999889999999999999999999999999999976654 567889999999999999999


Q ss_pred             hHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH-HHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248          236 SILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV-VVFILKQPEVEDLINSSDVDGNTPLHLAAINNH  304 (316)
Q Consensus       236 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~-~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~  304 (316)
                      +++-+|++.+ ++++...+...||||+||...+..+ +.+|+......  .-..+..+.||+.+|.+.+-
T Consensus       144 ~va~~LLqhg-aDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~--pg~~nn~eeta~~iARRT~~  210 (228)
T KOG0512|consen  144 EVAGRLLQHG-ADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIH--PGLKNNLEETAFDIARRTSM  210 (228)
T ss_pred             hHHHHHHhcc-CcccccccccchhhHHhhcccchHHHHHHHhhccccC--hhhhcCccchHHHHHHHhhh
Confidence            9999999875 4579999999999999998876654 55666543322  22356789999999998754


No 64 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83  E-value=9.5e-20  Score=153.74  Aligned_cols=157  Identities=13%  Similarity=0.043  Sum_probs=81.3

Q ss_pred             hccCCCCCcH-HHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccc-cc
Q 048248          109 RKRDEEGNTP-LHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVR-DE  186 (316)
Q Consensus       109 ~~~~~~g~t~-L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~-d~  186 (316)
                      +.+|..|+|+ ||.|+..++.++++.|++.|+++.....  ..+..|.||||+|+..++.++++.|+..+ ++++.+ +.
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~--~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~~~~  102 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP--LSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRYAEE  102 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc--ccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcccCC
Confidence            3455555553 3444455566666666666554421100  01234566666666666666665555443 335553 33


Q ss_pred             CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248          187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN  266 (316)
Q Consensus       187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~  266 (316)
                      .|.||||+|+..++.++++.|+..+ ++++.+|..|+||||+|+..++.+++..+..      ...+..+.+|++++   
T Consensus       103 ~g~TpLh~Aa~~~~~eivklLL~~G-Adin~kd~~G~TpL~~A~~~~~~~~~~~~~~------~~~~~~~~~~~~~~---  172 (300)
T PHA02884        103 AKITPLYISVLHGCLKCLEILLSYG-ADINIQTNDMVTPIELALMICNNFLAFMICD------NEISNFYKHPKKIL---  172 (300)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHhCChhHHHHhcC------CcccccccChhhhh---
Confidence            5666666666666666655555443 3344455666666666666555555443321      11344455555543   


Q ss_pred             CChhHHHHHhcC
Q 048248          267 GHADVVVFILKQ  278 (316)
Q Consensus       267 g~~~~~~~Ll~~  278 (316)
                      ++.+++++|+++
T Consensus       173 ~n~ei~~~Lish  184 (300)
T PHA02884        173 INFDILKILVSH  184 (300)
T ss_pred             ccHHHHHHHHHH
Confidence            245566655554


No 65 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.82  E-value=3.4e-19  Score=132.77  Aligned_cols=143  Identities=20%  Similarity=0.221  Sum_probs=98.0

Q ss_pred             HHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHH
Q 048248           42 LHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHN  121 (316)
Q Consensus        42 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~  121 (316)
                      +.+|+..+....|+.||+..++.++.+|.+|+||||-|+++|+.++++.|+..+++..          .+...||||||-
T Consensus        67 ~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~----------a~T~~GWTPLhS  136 (228)
T KOG0512|consen   67 LLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE----------AKTNEGWTPLHS  136 (228)
T ss_pred             HHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcc----------cccccCccchhh
Confidence            5567777777777777777777777777777777777777777777777776665532          345677777777


Q ss_pred             HHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcH-HHHHHHHHhccccccccccCCCcHHHHHHHhCc
Q 048248          122 AVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQF-VVMAKILEAKRDLINVRDERNRNPLRYAAALGH  200 (316)
Q Consensus       122 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~-~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~  200 (316)
                      |+..++.+++..|+++++++      +.+.++..||||+|+...+. ..+.+||......+-..+..+.||+.+|-+.+.
T Consensus       137 AckWnN~~va~~LLqhgaDV------nA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~  210 (228)
T KOG0512|consen  137 ACKWNNFEVAGRLLQHGADV------NAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM  210 (228)
T ss_pred             hhcccchhHHHHHHhccCcc------cccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence            77777777777777777665      23444567788887765443 445555555444556667778888888776544


No 66 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.80  E-value=1.5e-18  Score=146.52  Aligned_cols=150  Identities=21%  Similarity=0.176  Sum_probs=119.9

Q ss_pred             CCCCc-hHHHHHHHhCcHHHHHHHHHhcccccccc----ccCCCcHHHHHHHhCcHHHHHHhhcCCCCccccc-CCCCCc
Q 048248          151 GPNNL-TLLHSAIIKSQFVVMAKILEAKRDLINVR----DERNRNPLRYAAALGHFKIACRLSDEDDSLVYQH-DCNGQS  224 (316)
Q Consensus       151 ~~~~~-t~lh~A~~~~~~~~~~~ll~~~~~~~~~~----d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~-d~~g~t  224 (316)
                      +..+. ++||.|+..++.++++.|++.+. +++.+    +..|.||||+|+..++.++++.|++.+ ++++.+ +..|.|
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~~GA-diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~G-ADVN~~~~~~g~T  106 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILKLGA-DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYG-ADVNRYAEEAKIT  106 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHHCCC-CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCcCcccCCCCCC
Confidence            33444 46677777789999999998775 57876    468999999999999999999998755 566654 467999


Q ss_pred             HHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248          225 PLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNH  304 (316)
Q Consensus       225 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~  304 (316)
                      |||+|+..|+.+++++|+..+ ++++.+|..|.||||+|+..++.+++.++....     ++..   +.+|.+++   ++
T Consensus       107 pLh~Aa~~~~~eivklLL~~G-Adin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~-----~~~~---~~~~~~~~---~n  174 (300)
T PHA02884        107 PLYISVLHGCLKCLEILLSYG-ADINIQTNDMVTPIELALMICNNFLAFMICDNE-----ISNF---YKHPKKIL---IN  174 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCc-----cccc---ccChhhhh---cc
Confidence            999999999999999999876 457999999999999999999988887666432     2222   56777765   46


Q ss_pred             hhHHHHHhhc
Q 048248          305 FNIILVLARN  314 (316)
Q Consensus       305 ~~~~~~Ll~~  314 (316)
                      .+++++|+.+
T Consensus       175 ~ei~~~Lish  184 (300)
T PHA02884        175 FDILKILVSH  184 (300)
T ss_pred             HHHHHHHHHH
Confidence            8899988765


No 67 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.76  E-value=3.2e-19  Score=143.42  Aligned_cols=111  Identities=24%  Similarity=0.309  Sum_probs=63.0

Q ss_pred             CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248          150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA  229 (316)
Q Consensus       150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A  229 (316)
                      .|..|++|||+|++.|+..+++.||.++. .+|..+.-..||||+|+.+|+.+++..|+++.+ +++..+..|+||||+|
T Consensus        30 gddhgfsplhwaakegh~aivemll~rga-rvn~tnmgddtplhlaaahghrdivqkll~~ka-dvnavnehgntplhya  107 (448)
T KOG0195|consen   30 GDDHGFSPLHWAAKEGHVAIVEMLLSRGA-RVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKA-DVNAVNEHGNTPLHYA  107 (448)
T ss_pred             ccccCcchhhhhhhcccHHHHHHHHhccc-ccccccCCCCcchhhhhhcccHHHHHHHHHHhc-ccchhhccCCCchhhh
Confidence            34455666666666666666655555543 355555555666666666666666665554443 3345555666666666


Q ss_pred             HhcCCHhHHHHHHhhCCCCccccccCCCcHHHHH
Q 048248          230 SQNGQLSILENLLHSYPDSIEFIDNKNRNILHLA  263 (316)
Q Consensus       230 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A  263 (316)
                      |..|...|.+-|+..+. .++..+++|.|||-.|
T Consensus       108 cfwgydqiaedli~~ga-~v~icnk~g~tpldka  140 (448)
T KOG0195|consen  108 CFWGYDQIAEDLISCGA-AVNICNKKGMTPLDKA  140 (448)
T ss_pred             hhhcHHHHHHHHHhccc-eeeecccCCCCchhhh
Confidence            66666666666665433 3455666666666544


No 68 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.74  E-value=6.8e-17  Score=120.40  Aligned_cols=124  Identities=41%  Similarity=0.655  Sum_probs=96.5

Q ss_pred             cccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHH
Q 048248          184 RDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLA  263 (316)
Q Consensus       184 ~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A  263 (316)
                      +|.+|.||||+|+..++.++++.|+..+... +.++..|.||||.|+..+..++++.|+..+. .++..+..|.||+|+|
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~-~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~a   80 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLA   80 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHH
Confidence            4567888888888888888888887666543 4567788888888888888888888887654 3566777888888888


Q ss_pred             HHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHh
Q 048248          264 AQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLA  312 (316)
Q Consensus       264 ~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll  312 (316)
                      +..++.+++++|++.+.   .++..|..|.||+++|...++.+++++|+
T Consensus        81 ~~~~~~~~~~~L~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          81 ARNGNLDVVKLLLKHGA---DVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHcCcHHHHHHHHHcCC---CCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            88888888888887652   24556777888888888888888888874


No 69 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.72  E-value=1.9e-17  Score=133.25  Aligned_cols=115  Identities=25%  Similarity=0.287  Sum_probs=95.2

Q ss_pred             hhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccccc
Q 048248          107 ILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDE  186 (316)
Q Consensus       107 ~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~  186 (316)
                      .++.-|..|.+|||+|++.|+..+++.|+..|+.+..      .+....||||+|+..|+.++|+.||.... ++|..++
T Consensus        26 dln~gddhgfsplhwaakegh~aivemll~rgarvn~------tnmgddtplhlaaahghrdivqkll~~ka-dvnavne   98 (448)
T KOG0195|consen   26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNS------TNMGDDTPLHLAAAHGHRDIVQKLLSRKA-DVNAVNE   98 (448)
T ss_pred             ccccccccCcchhhhhhhcccHHHHHHHHhccccccc------ccCCCCcchhhhhhcccHHHHHHHHHHhc-ccchhhc
Confidence            4555688899999999999999999999998876532      23345699999999999999999998765 4899999


Q ss_pred             CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248          187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA  229 (316)
Q Consensus       187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A  229 (316)
                      .|.|||||||.=|+..+++-|+..++. ++..++.|.|||--|
T Consensus        99 hgntplhyacfwgydqiaedli~~ga~-v~icnk~g~tpldka  140 (448)
T KOG0195|consen   99 HGNTPLHYACFWGYDQIAEDLISCGAA-VNICNKKGMTPLDKA  140 (448)
T ss_pred             cCCCchhhhhhhcHHHHHHHHHhccce-eeecccCCCCchhhh
Confidence            999999999999998888888866554 567889999998876


No 70 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.69  E-value=8.6e-16  Score=114.39  Aligned_cols=123  Identities=37%  Similarity=0.551  Sum_probs=103.7

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  230 (316)
                      +..|.||||+|+..++.+.++.|+..+.. .+.++..|.||+|+|+..+..++++.|+..+. ..+..+..|.||+|+|+
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~-~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLAA   81 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHHH
Confidence            35688999999999999999888877653 47788899999999999999999988887764 34556788999999999


Q ss_pred             hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248          231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL  276 (316)
Q Consensus       231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll  276 (316)
                      ..++.++++.|+..+. .++..+..|.||+++|...++.+++++|+
T Consensus        82 ~~~~~~~~~~L~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          82 RNGNLDVVKLLLKHGA-DVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HcCcHHHHHHHHHcCC-CCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999998653 35778888999999999999999998874


No 71 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.68  E-value=5.5e-16  Score=141.04  Aligned_cols=212  Identities=16%  Similarity=0.160  Sum_probs=154.0

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcC--------CccccccCCCChHHHHHHHh---CCHHHHHHHHhcCCCcccc----CCC
Q 048248            6 HKLFRALRHGYTDKVREFARLNG--------NRILGTSQNGDTALHIAARF---GHEILVMEILKHQSDLVSV----PNH   70 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~--------~~~~~~~~~g~t~Lh~A~~~---~~~~~v~~Ll~~~~~~~~~----~~~   70 (316)
                      .+++.+...+..+.+..++....        ..++.+...|.|.||.|..+   ++.++++.|++.-+..++.    ...
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY  182 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEY  182 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhh
Confidence            56677777777777755554331        34556677899999999974   4568899998865543322    234


Q ss_pred             CCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccC
Q 048248           71 KSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQ  150 (316)
Q Consensus        71 ~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~  150 (316)
                      .|+||||+|+.+.+.++|++|++.++++... ..+.+....|..+..                  ..    .++   ...
T Consensus       183 ~GqSaLHiAIv~~~~~~V~lLl~~gADV~aR-a~G~FF~~~dqk~~r------------------k~----T~Y---~G~  236 (782)
T KOG3676|consen  183 YGQSALHIAIVNRDAELVRLLLAAGADVHAR-ACGAFFCPDDQKASR------------------KS----TNY---TGY  236 (782)
T ss_pred             cCcchHHHHHHhccHHHHHHHHHcCCchhhH-hhccccCcccccccc------------------cc----cCC---cce
Confidence            6999999999999999999999988765421 112223222221111                  00    000   112


Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCC-cccccCCCCCcHHHHH
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDS-LVYQHDCNGQSPLHLA  229 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~-~~~~~d~~g~tpLh~A  229 (316)
                      -.-|..||.+|+..++.+++..|++.+ ++++.+|+.|+|.||..+..-..++-..++..++. +...+|++|.|||-+|
T Consensus       237 ~YfGEyPLSfAAC~nq~eivrlLl~~g-Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLA  315 (782)
T KOG3676|consen  237 FYFGEYPLSFAACTNQPEIVRLLLAHG-ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLA  315 (782)
T ss_pred             eeeccCchHHHHHcCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHH
Confidence            235789999999999999999999865 56899999999999999987666777777776665 3457899999999999


Q ss_pred             HhcCCHhHHHHHHhh
Q 048248          230 SQNGQLSILENLLHS  244 (316)
Q Consensus       230 ~~~g~~~iv~~Ll~~  244 (316)
                      ++.|..++++.+++.
T Consensus       316 aklGk~emf~~ile~  330 (782)
T KOG3676|consen  316 AKLGKKEMFQHILER  330 (782)
T ss_pred             HHhhhHHHHHHHHHh
Confidence            999999999999987


No 72 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.67  E-value=3.6e-16  Score=109.49  Aligned_cols=82  Identities=32%  Similarity=0.489  Sum_probs=51.0

Q ss_pred             HHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH
Q 048248          192 LRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV  271 (316)
Q Consensus       192 Lh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~  271 (316)
                      ||+|++.|+.++++.|++.+.. .+.    |.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+.+|+.++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~   74 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGA-DINSQDKNGNTALHYAAENGNLEI   74 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTT-CTT-BSTTSSBHHHHHHHTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcc-cccccCCCCCCHHHHHHHcCCHHH
Confidence            5666666666666666664322 211    6667777776666777766666543 346666666666666666666666


Q ss_pred             HHHHhcCc
Q 048248          272 VVFILKQP  279 (316)
Q Consensus       272 ~~~Ll~~~  279 (316)
                      +++|++.+
T Consensus        75 ~~~Ll~~g   82 (89)
T PF12796_consen   75 VKLLLEHG   82 (89)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHcC
Confidence            66666654


No 73 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.66  E-value=6.9e-16  Score=108.06  Aligned_cols=82  Identities=43%  Similarity=0.624  Sum_probs=45.0

Q ss_pred             HHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCCh
Q 048248          226 LHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHF  305 (316)
Q Consensus       226 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~  305 (316)
                      ||+|++.|+.++++.|++.+.. ++.    |+||||+|+..|+.+++++|++.+.   .++.+|.+|+||||+|+..|+.
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~-~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGAD-INL----GNTALHYAAENGNLEIVKLLLENGA---DINSQDKNGNTALHYAAENGNL   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTST-TTS----SSBHHHHHHHTTTHHHHHHHHHTTT---CTT-BSTTSSBHHHHHHHTTHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCC-CCC----CCCHHHHHHHcCCHHHHHHHHHhcc---cccccCCCCCCHHHHHHHcCCH
Confidence            4556666666666666653322 222    5556666666666666666665543   2344555566666666666666


Q ss_pred             hHHHHHhhcC
Q 048248          306 NIILVLARNM  315 (316)
Q Consensus       306 ~~~~~Ll~~~  315 (316)
                      +++++|++.+
T Consensus        73 ~~~~~Ll~~g   82 (89)
T PF12796_consen   73 EIVKLLLEHG   82 (89)
T ss_dssp             HHHHHHHHTT
T ss_pred             HHHHHHHHcC
Confidence            6666665543


No 74 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.64  E-value=2.3e-15  Score=137.04  Aligned_cols=219  Identities=20%  Similarity=0.241  Sum_probs=150.0

Q ss_pred             cHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhc---CChhHHHHHHhhCCCcccccccccC
Q 048248           74 TPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRK---CDGKMAFTMIKKDPEPIRYNNKAKQ  150 (316)
Q Consensus        74 tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~---~~~~~~~~ll~~~~~~~~~~~~~~~  150 (316)
                      -++..|...+..+....++...... .....+..++.+..-|.|.||.|+.+   +..+++..|++..+..++..-. ..
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~-k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~-~e  180 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKS-KYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYT-SE  180 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhh-hhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhh-hH
Confidence            5666777777766666555432110 00001112455677899999999863   4567888888887655432211 22


Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCC-CcccccCC-----CCCc
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDD-SLVYQHDC-----NGQS  224 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~-~~~~~~d~-----~g~t  224 (316)
                      ...|.||||+|+.+.+.+.|..|+..+++ ++.+-           . |.+     +..... .....+|.     -|..
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~gAD-V~aRa-----------~-G~F-----F~~~dqk~~rk~T~Y~G~~YfGEy  242 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAGAD-VHARA-----------C-GAF-----FCPDDQKASRKSTNYTGYFYFGEY  242 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcCCc-hhhHh-----------h-ccc-----cCcccccccccccCCcceeeeccC
Confidence            34688999999999999999888877654 54431           1 110     000000 00001122     3789


Q ss_pred             HHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248          225 PLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNH  304 (316)
Q Consensus       225 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~  304 (316)
                      ||.+||..++.+|+++|++. +++++.+|..|+|.||..+..-..+|..++++.++. .+...+|+.|.|||-+|+.-|+
T Consensus       243 PLSfAAC~nq~eivrlLl~~-gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~-~l~~v~N~qgLTPLtLAaklGk  320 (782)
T KOG3676|consen  243 PLSFAACTNQPEIVRLLLAH-GADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN-ALEHVRNNQGLTPLTLAAKLGK  320 (782)
T ss_pred             chHHHHHcCCHHHHHHHHhc-CCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC-ccccccccCCCChHHHHHHhhh
Confidence            99999999999999999985 456799999999999999998888899999988876 4456678889999999999999


Q ss_pred             hhHHHHHhhc
Q 048248          305 FNIILVLARN  314 (316)
Q Consensus       305 ~~~~~~Ll~~  314 (316)
                      .++.+.++++
T Consensus       321 ~emf~~ile~  330 (782)
T KOG3676|consen  321 KEMFQHILER  330 (782)
T ss_pred             HHHHHHHHHh
Confidence            9999998876


No 75 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.62  E-value=1e-14  Score=120.25  Aligned_cols=127  Identities=34%  Similarity=0.434  Sum_probs=75.0

Q ss_pred             ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC-----HhHHHHHHhhCC--CCccccccC
Q 048248          183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ-----LSILENLLHSYP--DSIEFIDNK  255 (316)
Q Consensus       183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~-----~~iv~~Ll~~~~--~~~~~~d~~  255 (316)
                      ..+..+.+++|.++..+..+++..++..+... +.+|..|.||||+|+..|+     .++++.|++.+.  ...+..|..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADV-NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCc-ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            34445666666666666655555555444433 5566666666666666666     666666666555  344555666


Q ss_pred             CCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248          256 NRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       256 g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~  313 (316)
                      |.||||+|+..|+.+++.+|++.+..   ++.++..|.|+++.|+..++..+++.|++
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~l~~  201 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGAD---PNSRNSYGVTALDPAAKNGRIELVKLLLD  201 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCC---CcccccCCCcchhhhcccchHHHHHHHHh
Confidence            66666666666666666666655432   34445566666666666666666666654


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.57  E-value=2.6e-14  Score=117.81  Aligned_cols=127  Identities=28%  Similarity=0.377  Sum_probs=110.9

Q ss_pred             CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCc-----HHHHHHhhcCCC--CcccccCCCCC
Q 048248          151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH-----FKIACRLSDEDD--SLVYQHDCNGQ  223 (316)
Q Consensus       151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~-----~~~~~~ll~~~~--~~~~~~d~~g~  223 (316)
                      +..+.+++|.++..+....+..++..+.+ ++.+|..|.||||+|+..++     .++++.|+..+.  .....+|..|+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~  148 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGN  148 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHcCCC-cccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCC
Confidence            44577999999999998888777777655 59999999999999999999     899999998888  57777799999


Q ss_pred             cHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248          224 SPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP  279 (316)
Q Consensus       224 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~  279 (316)
                      ||||+|+..|+.++++.|++.++. ++.++..|.|++++|+..++.+++..++..+
T Consensus       149 tpl~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         149 TPLHWAALNGDADIVELLLEAGAD-PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             chhHHHHHcCchHHHHHHHhcCCC-CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            999999999999999999987544 5788999999999999999999999999853


No 77 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.52  E-value=3.8e-14  Score=94.68  Aligned_cols=106  Identities=26%  Similarity=0.311  Sum_probs=85.4

Q ss_pred             CCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248          188 NRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG  267 (316)
Q Consensus       188 g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g  267 (316)
                      |.--+.|++++|..+.++..+..+- +++ .-..|+||||+|+..|..+++++|+..+ +.++.+|+.|-|||--|++.|
T Consensus         2 ~d~~~~W~vkNG~~DeVk~~v~~g~-nVn-~~~ggR~plhyAAD~GQl~ilefli~iG-A~i~~kDKygITPLLsAvwEG   78 (117)
T KOG4214|consen    2 GDMSVAWNVKNGEIDEVKQSVNEGL-NVN-EIYGGRTPLHYAADYGQLSILEFLISIG-ANIQDKDKYGITPLLSAVWEG   78 (117)
T ss_pred             cchhHhhhhccCcHHHHHHHHHccc-cHH-HHhCCcccchHhhhcchHHHHHHHHHhc-cccCCccccCCcHHHHHHHHh
Confidence            3456789999999999999887773 333 3348999999999999999999999765 457999999999999999999


Q ss_pred             ChhHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248          268 HADVVVFILKQPEVEDLINSSDVDGNTPLHLA  299 (316)
Q Consensus       268 ~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A  299 (316)
                      |.++|++|++.+.... +..+  +|.+.+..+
T Consensus        79 H~~cVklLL~~GAdrt-~~~P--dG~~~~eat  107 (117)
T KOG4214|consen   79 HRDCVKLLLQNGADRT-IHAP--DGTALIEAT  107 (117)
T ss_pred             hHHHHHHHHHcCcccc-eeCC--CchhHHhhc
Confidence            9999999999987543 3333  466655544


No 78 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.51  E-value=1.2e-13  Score=92.36  Aligned_cols=102  Identities=19%  Similarity=0.201  Sum_probs=83.8

Q ss_pred             hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      .-+.+++.+|.++.|+..+..+ .++|.. ..|++|||+|+..|+.++++.|+..++. ++.+|+.|.|||..|+..||.
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g-~nVn~~-~ggR~plhyAAD~GQl~ilefli~iGA~-i~~kDKygITPLLsAvwEGH~   80 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEG-LNVNEI-YGGRTPLHYAADYGQLSILEFLISIGAN-IQDKDKYGITPLLSAVWEGHR   80 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcc-ccHHHH-hCCcccchHhhhcchHHHHHHHHHhccc-cCCccccCCcHHHHHHHHhhH
Confidence            3567889999999999888776 334443 3799999999999999999999987765 457899999999999999999


Q ss_pred             hHHHHHHhhCCCCccccccCCCcHHH
Q 048248          236 SILENLLHSYPDSIEFIDNKNRNILH  261 (316)
Q Consensus       236 ~iv~~Ll~~~~~~~~~~d~~g~tpLh  261 (316)
                      ++|++|+.++.+ -..+..+|.+.+-
T Consensus        81 ~cVklLL~~GAd-rt~~~PdG~~~~e  105 (117)
T KOG4214|consen   81 DCVKLLLQNGAD-RTIHAPDGTALIE  105 (117)
T ss_pred             HHHHHHHHcCcc-cceeCCCchhHHh
Confidence            999999988765 3667778877663


No 79 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.48  E-value=3.5e-14  Score=89.58  Aligned_cols=50  Identities=28%  Similarity=0.372  Sum_probs=16.7

Q ss_pred             CcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHH
Q 048248          213 SLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLA  263 (316)
Q Consensus       213 ~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A  263 (316)
                      .+++.+|..|+||||+|+..|+.+++++|+ ..+.+++.+|..|+||||+|
T Consensus         7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll-~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLL-QNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             --TT---TTS--HHHHHHHHT-HHHHHHHH-HCT--TT---TTS--HHHH-
T ss_pred             CCCcCcCCCCCcHHHHHHHcCcHHHHHHHH-HCcCCCCCCcCCCCCHHHhC
Confidence            334444555555555555555555555555 22333445555555555544


No 80 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.48  E-value=9.3e-14  Score=87.19  Aligned_cols=53  Identities=42%  Similarity=0.649  Sum_probs=21.2

Q ss_pred             CCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248          256 NRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL  311 (316)
Q Consensus       256 g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L  311 (316)
                      |+||||+|+..|+.+++++|++.+.   .++.+|.+|.||||+|++.|+.+++++|
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~---din~~d~~g~t~lh~A~~~g~~~~~~~L   53 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGA---DINAQDEDGRTPLHYAAKNGNIDIVKFL   53 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTS---GTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence            3444444444444444444444321   1344444444444444444444444444


No 81 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.48  E-value=1e-13  Score=87.04  Aligned_cols=54  Identities=43%  Similarity=0.695  Sum_probs=44.7

Q ss_pred             CCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248          222 GQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL  276 (316)
Q Consensus       222 g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll  276 (316)
                      |+||||+|++.|+.++++.|++.+ .+++.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~-~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHG-ADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTT-SGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            789999999999999999999885 557999999999999999999999999986


No 82 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.47  E-value=5.4e-14  Score=88.72  Aligned_cols=56  Identities=39%  Similarity=0.561  Sum_probs=32.5

Q ss_pred             HHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248          241 LLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLA  299 (316)
Q Consensus       241 Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A  299 (316)
                      ||+.++.+++.+|..|.||||+|+.+|+.+++++|++.+   ..++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g---~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNG---ADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT-----TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCc---CCCCCCcCCCCCHHHhC
Confidence            566666778999999999999999999999999999665   34788999999999997


No 83 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.38  E-value=3.2e-12  Score=103.30  Aligned_cols=123  Identities=21%  Similarity=0.225  Sum_probs=104.7

Q ss_pred             CchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC
Q 048248          154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG  233 (316)
Q Consensus       154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g  233 (316)
                      ...||.-++.+++.+.+..||.. ...+|.+|..|.+||..|+..|+.+.++.+++.+++.....+..++||||+|+.+|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG   90 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG   90 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC
Confidence            35799999999999998888865 44589999999999999999999999998887776655555667899999999999


Q ss_pred             CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          234 QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       234 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      +.++.+.|++.+.. ....+.-|+|+-.+|+.-|+.++|..+-.+
T Consensus        91 n~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   91 NQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             CchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            99999999987655 477888899999999999999999887654


No 84 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.37  E-value=2.3e-12  Score=121.96  Aligned_cols=106  Identities=22%  Similarity=0.169  Sum_probs=77.0

Q ss_pred             hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      +.|+.|+..|+.+.++.|+..+. +++.+|..|+||||+|+..|+.++++.|+..+ .+++.+|.+|.||||+|+..|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Ga-din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~G-advn~~d~~G~TpLh~A~~~g~~  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGA-DPNCRDYDGRTPLHIACANGHVQVVRVLLEFG-ADPTLLDKDGKTPLELAEENGFR  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCcH
Confidence            45777888888888877776553 47778888888888888888888888777664 44566788888888888888888


Q ss_pred             hHHHHHHhh------CCCCccccccCCCcHHHHH
Q 048248          236 SILENLLHS------YPDSIEFIDNKNRNILHLA  263 (316)
Q Consensus       236 ~iv~~Ll~~------~~~~~~~~d~~g~tpLh~A  263 (316)
                      +++++|+..      .++..+..+..|.+|+..+
T Consensus       162 ~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        162 EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            888888865      1233455566677776544


No 85 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.36  E-value=7.2e-12  Score=101.29  Aligned_cols=124  Identities=19%  Similarity=0.319  Sum_probs=101.9

Q ss_pred             CCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHH
Q 048248          114 EGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLR  193 (316)
Q Consensus       114 ~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh  193 (316)
                      .-..||.-++..++.+-...|+..      ..+.+..|++|+|||..|+..|++++++.||+.+.+....++..+.||||
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~------vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLm   84 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLST------VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLM   84 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHH------hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHH
Confidence            346899999999999988888885      22345678899999999999999999999998887644456778999999


Q ss_pred             HHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhh
Q 048248          194 YAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHS  244 (316)
Q Consensus       194 ~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~  244 (316)
                      +|+-.|+.++.+.|++.+.. ....|.-|+|+-..|+.-|+-++|..+-..
T Consensus        85 FAALSGn~dvcrllldaGa~-~~~vNsvgrTAaqmAAFVG~H~CV~iINN~  134 (396)
T KOG1710|consen   85 FAALSGNQDVCRLLLDAGAR-MYLVNSVGRTAAQMAAFVGHHECVAIINNH  134 (396)
T ss_pred             HHHHcCCchHHHHHHhccCc-cccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence            99999999887777766554 456788899999999999999999955543


No 86 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36  E-value=2.4e-12  Score=111.96  Aligned_cols=113  Identities=19%  Similarity=0.123  Sum_probs=77.0

Q ss_pred             HHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHH
Q 048248          195 AAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVF  274 (316)
Q Consensus       195 A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~  274 (316)
                      |+-.|.+++|...+.+-. ++.+.|.+|.|+||.|+..||.+||+||++.+ +++|..|.+||||||.|+..++..+++.
T Consensus       557 aaLeGEldlVq~~i~ev~-DpSqpNdEGITaLHNAiCaghyeIVkFLi~~g-anVNa~DSdGWTPLHCAASCNnv~~ckq  634 (752)
T KOG0515|consen  557 AALEGELDLVQRIIYEVT-DPSQPNDEGITALHNAICAGHYEIVKFLIEFG-ANVNAADSDGWTPLHCAASCNNVPMCKQ  634 (752)
T ss_pred             hhhcchHHHHHHHHHhhc-CCCCCCccchhHHhhhhhcchhHHHHHHHhcC-CcccCccCCCCchhhhhhhcCchHHHHH
Confidence            666677777777765433 34556777888888888888888888888664 4467888888888888888888888888


Q ss_pred             HhcCcccccccccCCCCCCcHHHHH--HHcCChhHHHHH
Q 048248          275 ILKQPEVEDLINSSDVDGNTPLHLA--AINNHFNIILVL  311 (316)
Q Consensus       275 Ll~~~~~~~~~~~~d~~g~t~L~~A--~~~~~~~~~~~L  311 (316)
                      |++.|.+.  +-..=.++.||..-+  -..|..+|.++|
T Consensus       635 LVe~Gaav--fAsTlSDmeTa~eKCee~eeGY~~CsqyL  671 (752)
T KOG0515|consen  635 LVESGAAV--FASTLSDMETAAEKCEEMEEGYDQCSQYL  671 (752)
T ss_pred             HHhccceE--EeeecccccchhhhcchhhhhHHHHHHHH
Confidence            88777543  222234566665533  234555666665


No 87 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.34  E-value=5.3e-12  Score=119.50  Aligned_cols=107  Identities=20%  Similarity=0.174  Sum_probs=79.2

Q ss_pred             cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248          117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA  196 (316)
Q Consensus       117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  196 (316)
                      ..|+.|+..|+.+.++.|+..+.++      +..+..|.||||+|+..|+.++++.|+..+. +++.+|..|.||||+|+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadi------n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga-dvn~~d~~G~TpLh~A~  156 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADP------NCRDYDGRTPLHIACANGHVQVVRVLLEFGA-DPTLLDKDGKTPLELAE  156 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCC------CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHH
Confidence            3577888888888888888877654      3356678888888888888888888887654 47888888888888888


Q ss_pred             HhCcHHHHHHhhcC------CCCcccccCCCCCcHHHHHH
Q 048248          197 ALGHFKIACRLSDE------DDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       197 ~~g~~~~~~~ll~~------~~~~~~~~d~~g~tpLh~A~  230 (316)
                      ..|+.++++.|+..      .++.....+..|.+|+..+.
T Consensus       157 ~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        157 ENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            88888888888765      23333445556777766543


No 88 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28  E-value=1.3e-11  Score=107.49  Aligned_cols=119  Identities=17%  Similarity=0.229  Sum_probs=98.1

Q ss_pred             HHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHh
Q 048248          157 LLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLS  236 (316)
Q Consensus       157 ~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~  236 (316)
                      .|.-|+..|.+++|+.++..-. ++...|..|-|+||-|+-.||.+||+.|+..+ .++|..|.+||||||+|+.+++..
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~-DpSqpNdEGITaLHNAiCaghyeIVkFLi~~g-anVNa~DSdGWTPLHCAASCNnv~  630 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVT-DPSQPNDEGITALHNAICAGHYEIVKFLIEFG-ANVNAADSDGWTPLHCAASCNNVP  630 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhc-CCCCCCccchhHHhhhhhcchhHHHHHHHhcC-CcccCccCCCCchhhhhhhcCchH
Confidence            3445788899999999887654 46777889999999999999999999888655 557889999999999999999999


Q ss_pred             HHHHHHhhCCCCccccccCCCcHHHHHH--HcCChhHHHHHhc
Q 048248          237 ILENLLHSYPDSIEFIDNKNRNILHLAA--QNGHADVVVFILK  277 (316)
Q Consensus       237 iv~~Ll~~~~~~~~~~d~~g~tpLh~A~--~~g~~~~~~~Ll~  277 (316)
                      +++.|++.+++..-..-.++.|+.--+-  +.|+.+|..||..
T Consensus       631 ~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  631 MCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            9999999887743334557888876654  3589999999884


No 89 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.83  E-value=3.3e-09  Score=91.60  Aligned_cols=92  Identities=21%  Similarity=0.264  Sum_probs=68.9

Q ss_pred             cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHH
Q 048248          186 ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQ  265 (316)
Q Consensus       186 ~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~  265 (316)
                      .++..++.+|++.|....++++...+.+ .+.+|.+.+|+||.|+..|+.+++++|++....+.+.+|..|+|||.-|-.
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D-~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~  582 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMD-LETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKH  582 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhccc-ccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHh
Confidence            4456677788888887777777655443 456777788888888888888888888877777777788888888888888


Q ss_pred             cCChhHHHHHhcC
Q 048248          266 NGHADVVVFILKQ  278 (316)
Q Consensus       266 ~g~~~~~~~Ll~~  278 (316)
                      .+|.+++++|-+.
T Consensus       583 F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  583 FKHKEVVKLLEEA  595 (622)
T ss_pred             cCcHHHHHHHHHH
Confidence            8888888777654


No 90 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.74  E-value=9.1e-09  Score=88.92  Aligned_cols=93  Identities=29%  Similarity=0.357  Sum_probs=80.7

Q ss_pred             CCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHH
Q 048248          219 DCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHL  298 (316)
Q Consensus       219 d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~  298 (316)
                      ..++..++.+|++.|....++.+.-.+ .+++.+|.+.+|+||.||..|+.+++++|+..-+  ...+.+|.+|+|||.-
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g-~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~k--v~~~~kDRw~rtPlDd  579 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQG-MDLETKDYDDRTALHVAAAEGHVEVVKFLLNACK--VDPDPKDRWGRTPLDD  579 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhc-ccccccccccchhheeecccCceeHHHHHHHHHc--CCCChhhccCCCcchH
Confidence            345678899999999999998777554 5579999999999999999999999999998654  3366789999999999


Q ss_pred             HHHcCChhHHHHHhhc
Q 048248          299 AAINNHFNIILVLARN  314 (316)
Q Consensus       299 A~~~~~~~~~~~Ll~~  314 (316)
                      |...+|.+++++|-+-
T Consensus       580 A~~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  580 AKHFKHKEVVKLLEEA  595 (622)
T ss_pred             hHhcCcHHHHHHHHHH
Confidence            9999999999998653


No 91 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.72  E-value=5.6e-08  Score=85.93  Aligned_cols=121  Identities=27%  Similarity=0.354  Sum_probs=102.4

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCC-ccccCCCCCCcHHHHHHHhCC
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSD-LVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      ..+..|+..+++-.+++....+|. +-..+.+..|.||+|++-|+-++|+|+|++++. .....|..|.|+||-|+..++
T Consensus       868 eeil~av~~~D~~klqE~h~~gg~-ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  868 EEILRAVLSSDLMKLQETHLNGGS-LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRN  946 (1004)
T ss_pred             HHHHHHHHhccHHHHHHHHhcCCc-eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcc
Confidence            457889999998888888777664 456778889999999999999999999999874 344566789999999999999


Q ss_pred             hhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhh
Q 048248           85 FGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKK  137 (316)
Q Consensus        85 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~  137 (316)
                      ..+++++++.++          .+.+.|..|.||-..|-+.++.+++.+|-..
T Consensus       947 r~vc~~lvdaga----------sl~ktd~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  947 RAVCQLLVDAGA----------SLRKTDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             hHHHHHHHhcch----------hheecccCCCChHHHHHhcCCchHHHHHhhh
Confidence            999999998653          3778899999999999999999888777654


No 92 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.70  E-value=1.8e-08  Score=92.69  Aligned_cols=89  Identities=21%  Similarity=0.221  Sum_probs=75.5

Q ss_pred             cccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCC-CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCc
Q 048248          180 LINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDC-NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRN  258 (316)
Q Consensus       180 ~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t  258 (316)
                      ..|+.|..|+|+||+|+..+...+++.|++.+. ++..+|. .|+||||-|..+|+.+++-.|+..+ .....+|++|.+
T Consensus        44 ~anikD~~GR~alH~~~S~~k~~~l~wLlqhGi-dv~vqD~ESG~taLHRaiyyG~idca~lLL~~g-~SL~i~Dkegls  121 (1267)
T KOG0783|consen   44 LANIKDRYGRTALHIAVSENKNSFLRWLLQHGI-DVFVQDEESGYTALHRAIYYGNIDCASLLLSKG-RSLRIKDKEGLS  121 (1267)
T ss_pred             hhhHHHhhccceeeeeeccchhHHHHHHHhcCc-eeeeccccccchHhhHhhhhchHHHHHHHHhcC-CceEEecccCCC
Confidence            478899999999999999999999999998854 4555564 7999999999999999999999776 557899999999


Q ss_pred             HHHHHHHcCChh
Q 048248          259 ILHLAAQNGHAD  270 (316)
Q Consensus       259 pLh~A~~~g~~~  270 (316)
                      ||..-++-....
T Consensus       122 plq~~~r~~~~~  133 (1267)
T KOG0783|consen  122 PLQFLSRVLSST  133 (1267)
T ss_pred             HHHHHhhccccc
Confidence            999888744433


No 93 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.70  E-value=6.6e-08  Score=84.09  Aligned_cols=86  Identities=24%  Similarity=0.308  Sum_probs=72.7

Q ss_pred             HHHHHHHhCcHHHHHHHHHhcccccccc-ccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          157 LLHSAIIKSQFVVMAKILEAKRDLINVR-DERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       157 ~lh~A~~~~~~~~~~~ll~~~~~~~~~~-d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      .||..++.|+.+....||..+++ +|.. -..|.||||.|++.|+.-.++.|+ .+|+++...|.+|+||+-+|-..||-
T Consensus       136 QLhasvRt~nlet~LRll~lGA~-~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~-vYGAD~~a~d~~GmtP~~~AR~~gH~  213 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQ-ANFFHPEKGNTPLHVAAKAGQILQAELLA-VYGADPGAQDSSGMTPVDYARQGGHH  213 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccc-cCCCCcccCCchhHHHHhccchhhhhHHh-hccCCCCCCCCCCCcHHHHHHhcCch
Confidence            68999999999999999887765 5655 457999999999999988787776 45566778999999999999999999


Q ss_pred             hHHHHHHhh
Q 048248          236 SILENLLHS  244 (316)
Q Consensus       236 ~iv~~Ll~~  244 (316)
                      ++.+.|++.
T Consensus       214 ~laeRl~e~  222 (669)
T KOG0818|consen  214 ELAERLVEI  222 (669)
T ss_pred             HHHHHHHHH
Confidence            988888764


No 94 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.69  E-value=6.9e-08  Score=85.36  Aligned_cols=116  Identities=20%  Similarity=0.225  Sum_probs=93.5

Q ss_pred             HHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCC-CccccccCCCcHHHHHHHcCChhH
Q 048248          193 RYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPD-SIEFIDNKNRNILHLAAQNGHADV  271 (316)
Q Consensus       193 h~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~-~~~~~d~~g~tpLh~A~~~g~~~~  271 (316)
                      ..|+..+.+--+......+++.. .++.+..|.||+|+..|+-+||++++.+++. .++..|..|.|+||.|+-.++.-+
T Consensus       871 l~av~~~D~~klqE~h~~gg~ll-~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~v  949 (1004)
T KOG0782|consen  871 LRAVLSSDLMKLQETHLNGGSLL-IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAV  949 (1004)
T ss_pred             HHHHHhccHHHHHHHHhcCCceE-eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHH
Confidence            34555555433444444566654 4788888999999999999999999998865 467788999999999999999999


Q ss_pred             HHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHh
Q 048248          272 VVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLA  312 (316)
Q Consensus       272 ~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll  312 (316)
                      +.+|++.+..   +-..|..|.||-..|-+.|+.+++-+|-
T Consensus       950 c~~lvdagas---l~ktd~kg~tp~eraqqa~d~dlaayle  987 (1004)
T KOG0782|consen  950 CQLLVDAGAS---LRKTDSKGKTPQERAQQAGDPDLAAYLE  987 (1004)
T ss_pred             HHHHHhcchh---heecccCCCChHHHHHhcCCchHHHHHh
Confidence            9999988753   3456889999999999999999998874


No 95 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.64  E-value=5.2e-08  Score=52.40  Aligned_cols=27  Identities=44%  Similarity=0.655  Sum_probs=22.4

Q ss_pred             CCChHHHHHHHhCCHHHHHHHHhcCCC
Q 048248           37 NGDTALHIAARFGHEILVMEILKHQSD   63 (316)
Q Consensus        37 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~   63 (316)
                      +|+||||+||+.|+.++|++|++.+++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            478888888888888888888887765


No 96 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.61  E-value=1.5e-07  Score=82.03  Aligned_cols=85  Identities=22%  Similarity=0.294  Sum_probs=54.4

Q ss_pred             HHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH
Q 048248          192 LRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV  271 (316)
Q Consensus       192 Lh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~  271 (316)
                      ||..+..|+.+...+|+..++...+-.-..|.||||.|++.|+..=+++|+-. ++++...|.+|.||+.+|=..||.++
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vY-GAD~~a~d~~GmtP~~~AR~~gH~~l  215 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVY-GADPGAQDSSGMTPVDYARQGGHHEL  215 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhc-cCCCCCCCCCCCcHHHHHHhcCchHH
Confidence            66666777777666666665554443334566777777777777666666543 34456667777777777766777666


Q ss_pred             HHHHhc
Q 048248          272 VVFILK  277 (316)
Q Consensus       272 ~~~Ll~  277 (316)
                      ...|++
T Consensus       216 aeRl~e  221 (669)
T KOG0818|consen  216 AERLVE  221 (669)
T ss_pred             HHHHHH
Confidence            666664


No 97 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.61  E-value=3e-08  Score=91.30  Aligned_cols=89  Identities=24%  Similarity=0.302  Sum_probs=76.8

Q ss_pred             CCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCcccccc-CCCcHHHHHHHcCChhHHHHHhcCcccccccccC
Q 048248          210 EDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDN-KNRNILHLAAQNGHADVVVFILKQPEVEDLINSS  288 (316)
Q Consensus       210 ~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~  288 (316)
                      .+....+++|.-|+|+||+|+..+..++++-|+.+| .+++.+|. .|+||||-|..+|++|++..||+++..   +...
T Consensus        40 ~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhG-idv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~S---L~i~  115 (1267)
T KOG0783|consen   40 SCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHG-IDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRS---LRIK  115 (1267)
T ss_pred             hhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcC-ceeeeccccccchHhhHhhhhchHHHHHHHHhcCCc---eEEe
Confidence            344456789999999999999999999999999885 45677776 799999999999999999999999843   5568


Q ss_pred             CCCCCcHHHHHHHc
Q 048248          289 DVDGNTPLHLAAIN  302 (316)
Q Consensus       289 d~~g~t~L~~A~~~  302 (316)
                      |++|.+||.+-++.
T Consensus       116 Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen  116 DKEGLSPLQFLSRV  129 (1267)
T ss_pred             cccCCCHHHHHhhc
Confidence            99999999988774


No 98 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.59  E-value=5.6e-08  Score=52.27  Aligned_cols=24  Identities=50%  Similarity=0.689  Sum_probs=14.5

Q ss_pred             CCcHHHHHHHcCChhHHHHHhhcC
Q 048248          292 GNTPLHLAAINNHFNIILVLARNM  315 (316)
Q Consensus       292 g~t~L~~A~~~~~~~~~~~Ll~~~  315 (316)
                      |+||||+|++.|+.+++++|++++
T Consensus         2 G~T~Lh~A~~~g~~e~v~~Ll~~g   25 (30)
T PF13606_consen    2 GNTPLHLAASNGNIEIVKYLLEHG   25 (30)
T ss_pred             CCCHHHHHHHhCCHHHHHHHHHcC
Confidence            556666666666666666666554


No 99 
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.59  E-value=1.3e-07  Score=83.27  Aligned_cols=88  Identities=31%  Similarity=0.389  Sum_probs=59.4

Q ss_pred             HHHHHHHhCcHHHHHHHHHh-ccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248          157 LLHSAIIKSQFVVMAKILEA-KRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL  235 (316)
Q Consensus       157 ~lh~A~~~~~~~~~~~ll~~-~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  235 (316)
                      |+|.++.....+-+...+.. ....++.+|..|+||||+|+..|+.+.+..|+..+++ ...+|+.||+|||-|+..|+.
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad-v~~kN~~gWs~L~EAv~~g~~  101 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD-VSIKNNEGWSPLHEAVSTGNE  101 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCC-ccccccccccHHHHHHHcCCH
Confidence            46666666555554443332 2334677777788888888888887777777765554 345777888888888888888


Q ss_pred             hHHHHHHhhC
Q 048248          236 SILENLLHSY  245 (316)
Q Consensus       236 ~iv~~Ll~~~  245 (316)
                      +++..++.++
T Consensus       102 q~i~~vlr~~  111 (560)
T KOG0522|consen  102 QIITEVLRHL  111 (560)
T ss_pred             HHHHHHHHHh
Confidence            7777777654


No 100
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.57  E-value=9.8e-08  Score=52.82  Aligned_cols=32  Identities=38%  Similarity=0.576  Sum_probs=18.1

Q ss_pred             CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccc
Q 048248          221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFID  253 (316)
Q Consensus       221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d  253 (316)
                      +|.||||+|+..|+.+++++|++.+. +++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga-~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGA-DINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTS-CTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcC-CCCCCC
Confidence            35666666666666666666665432 234443


No 101
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.55  E-value=2e-07  Score=82.05  Aligned_cols=88  Identities=25%  Similarity=0.291  Sum_probs=75.6

Q ss_pred             HHHHHHHhcCChHHHHHHHHhc-CCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC
Q 048248            6 HKLFRALRHGYTDKVREFARLN-GNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~-~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      .++|.+....+.+.+...+... ...++..|..|+||||+|+..|+.+.+..|+..++.+ ...|++|++|||.|+..|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv-~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADV-SIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCc-cccccccccHHHHHHHcCC
Confidence            4699999999999997766544 3357788999999999999999999999999999874 6688999999999999999


Q ss_pred             hhHHHHhhcc
Q 048248           85 FGAAQIFMRP   94 (316)
Q Consensus        85 ~~~~~~l~~~   94 (316)
                      -.++..++..
T Consensus       101 ~q~i~~vlr~  110 (560)
T KOG0522|consen  101 EQIITEVLRH  110 (560)
T ss_pred             HHHHHHHHHH
Confidence            9888777754


No 102
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.53  E-value=9.3e-08  Score=90.50  Aligned_cols=130  Identities=19%  Similarity=0.108  Sum_probs=96.2

Q ss_pred             ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHH
Q 048248          183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHL  262 (316)
Q Consensus       183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~  262 (316)
                      ...-.|.|-+|+++..++...++.+++..+.....-|.+|...+|+ |..++.++..+|+...+..++++|..|||||||
T Consensus       569 ~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~w  647 (975)
T KOG0520|consen  569 SVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHW  647 (975)
T ss_pred             cCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccch
Confidence            3455789999999999998888888885333333455666666777 555666666666665566689999999999999


Q ss_pred             HHHcCChhHHHHHhcCcccccc---cccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248          263 AAQNGHADVVVFILKQPEVEDL---INSSDVDGNTPLHLAAINNHFNIILVLAR  313 (316)
Q Consensus       263 A~~~g~~~~~~~Ll~~~~~~~~---~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~  313 (316)
                      |+..|+..++.-|++.+.....   .....-.|.|+-.+|..+|+..+.-+|-+
T Consensus       648 Aa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse  701 (975)
T KOG0520|consen  648 AAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSE  701 (975)
T ss_pred             HhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhh
Confidence            9999999999998866543221   12223458999999999999988887754


No 103
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.51  E-value=2e-07  Score=51.52  Aligned_cols=28  Identities=46%  Similarity=0.716  Sum_probs=24.3

Q ss_pred             CCChHHHHHHHhCCHHHHHHHHhcCCCc
Q 048248           37 NGDTALHIAARFGHEILVMEILKHQSDL   64 (316)
Q Consensus        37 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~   64 (316)
                      +|+||||+|+..|+.+++++|++.+++.
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~   28 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADI   28 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence            5889999999999999999999988764


No 104
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.43  E-value=4.5e-07  Score=86.00  Aligned_cols=128  Identities=19%  Similarity=0.186  Sum_probs=101.8

Q ss_pred             CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248          150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA  229 (316)
Q Consensus       150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A  229 (316)
                      ....|+|.+|+++..+.--.++.+++..+......|.+|...+|+ |..++.+.+..++.-.+..++.+|..||||||+|
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wA  648 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPLHWA  648 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCcccchH
Confidence            344688999999999998889998875334456778889999999 5556677888888777777888999999999999


Q ss_pred             HhcCCHhHHHHHHhhCCCCc-----cccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          230 SQNGQLSILENLLHSYPDSI-----EFIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       230 ~~~g~~~iv~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      +..|+..++..|++-+...-     ...+..|.|+--.|..+|+..+.-+|-+.
T Consensus       649 a~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  649 AFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             hhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999999997654321     12244699999999999998887776643


No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.32  E-value=1.7e-06  Score=76.87  Aligned_cols=86  Identities=22%  Similarity=0.270  Sum_probs=53.7

Q ss_pred             HHHHhCcHHHHHHhhcCCCCcc---cccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChh
Q 048248          194 YAAALGHFKIACRLSDEDDSLV---YQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHAD  270 (316)
Q Consensus       194 ~A~~~g~~~~~~~ll~~~~~~~---~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~  270 (316)
                      .|+...+...+..||..+....   ..-+.+|.|+||+||+.|++.+.+.|+ -++.++-.+|..|+|+|+||=..|..+
T Consensus       630 ~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLi-Wyg~dv~~rda~g~t~l~yar~a~sqe  708 (749)
T KOG0705|consen  630 RAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLI-WYGVDVMARDAHGRTALFYARQAGSQE  708 (749)
T ss_pred             HHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHH-HhCccceecccCCchhhhhHhhcccHH
Confidence            3444444444444444332211   112345677777777777777777666 555666777777777777777777777


Q ss_pred             HHHHHhcCcc
Q 048248          271 VVVFILKQPE  280 (316)
Q Consensus       271 ~~~~Ll~~~~  280 (316)
                      |+.+|+.+|.
T Consensus       709 c~d~llq~gc  718 (749)
T KOG0705|consen  709 CIDVLLQYGC  718 (749)
T ss_pred             HHHHHHHcCC
Confidence            7777777653


No 106
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.27  E-value=2e-06  Score=76.46  Aligned_cols=87  Identities=23%  Similarity=0.181  Sum_probs=68.7

Q ss_pred             HHHHHhcCCHhHHHHHHhhCCC-Cccc--cccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHc
Q 048248          226 LHLASQNGQLSILENLLHSYPD-SIEF--IDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       226 Lh~A~~~g~~~iv~~Ll~~~~~-~~~~--~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~  302 (316)
                      |.-|+.......+-+||.++.. .++.  -+.+|+|+||+||..|++.+.++|+=++.   ++-.+|..|+|||.||.+.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~---dv~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGV---DVMARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCc---cceecccCCchhhhhHhhc
Confidence            4456666666677778877632 2232  35678999999999999999999996653   3567899999999999999


Q ss_pred             CChhHHHHHhhcC
Q 048248          303 NHFNIILVLARNM  315 (316)
Q Consensus       303 ~~~~~~~~Ll~~~  315 (316)
                      |..+|+.+|++.|
T Consensus       705 ~sqec~d~llq~g  717 (749)
T KOG0705|consen  705 GSQECIDVLLQYG  717 (749)
T ss_pred             ccHHHHHHHHHcC
Confidence            9999999999865


No 107
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.18  E-value=5e-06  Score=77.56  Aligned_cols=82  Identities=27%  Similarity=0.230  Sum_probs=65.6

Q ss_pred             hHHHHHHHhCcHHHHHHHHHhccc---cccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248          156 TLLHSAIIKSQFVVMAKILEAKRD---LINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN  232 (316)
Q Consensus       156 t~lh~A~~~~~~~~~~~ll~~~~~---~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~  232 (316)
                      --...|+..|+...|+..++....   .+|.+|.-|+++|+.|+.+.+.++.+.|++.....        ..+|.+|+..
T Consensus        27 ~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI~~   98 (822)
T KOG3609|consen   27 KGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAIAV   98 (822)
T ss_pred             HHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHHHH
Confidence            346678999999999999976543   36778889999999999999999988887553221        2588999999


Q ss_pred             CCHhHHHHHHhhC
Q 048248          233 GQLSILENLLHSY  245 (316)
Q Consensus       233 g~~~iv~~Ll~~~  245 (316)
                      |..++|+.++...
T Consensus        99 ~~v~~VE~ll~~~  111 (822)
T KOG3609|consen   99 GSVPLVELLLVHF  111 (822)
T ss_pred             HHHHHHHHHHhcc
Confidence            9999999998753


No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.11  E-value=5.9e-06  Score=63.47  Aligned_cols=68  Identities=22%  Similarity=0.214  Sum_probs=54.6

Q ss_pred             cccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCC
Q 048248          180 LINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPD  247 (316)
Q Consensus       180 ~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~  247 (316)
                      ++|.+|..|+||++.|+..|..+.+.+|+.++.+.+...|..|.+++-+|-+.|+.+++..|.+....
T Consensus         4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            46788888888888888888888888888887777777888888888888888888888888776544


No 109
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.08  E-value=1e-05  Score=62.21  Aligned_cols=66  Identities=17%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             cccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCC
Q 048248          147 KAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDD  212 (316)
Q Consensus       147 ~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~  212 (316)
                      .+..|..|+|+++.|+..|+.+.+.+|+..+.+.+..+|+.|.+++.+|-+.|..+.+..|.+...
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            456778899999999999999999999999878899999999999999999999888888876543


No 110
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.03  E-value=2.6e-05  Score=72.87  Aligned_cols=130  Identities=15%  Similarity=0.075  Sum_probs=97.3

Q ss_pred             ccHHHHHHHhcCChHHHHHHHHhcCC---ccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHH
Q 048248            4 VDHKLFRALRHGYTDKVREFARLNGN---RILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAA   80 (316)
Q Consensus         4 ~~~~l~~a~~~g~~~~~~~ll~~~~~---~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~   80 (316)
                      .+.....|+.+|+.-.|+..+.....   .+|..|..|+++|++|..+.+.++++.|++.....        .-+|.+|+
T Consensus        25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--------gdALL~aI   96 (822)
T KOG3609|consen   25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--------GDALLLAI   96 (822)
T ss_pred             hhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--------chHHHHHH
Confidence            34566779999999999998876543   46778999999999999999999999999866331        35799999


Q ss_pred             HhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCc
Q 048248           81 RAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEP  141 (316)
Q Consensus        81 ~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~  141 (316)
                      ..|..+++++++.............+.-...-..+.|||..|+..+++++++.|+..+...
T Consensus        97 ~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i  157 (822)
T KOG3609|consen   97 AVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCI  157 (822)
T ss_pred             HHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCC
Confidence            9999999999997543221110000000011235779999999999999999999988644


No 111
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.98  E-value=8.8e-06  Score=77.70  Aligned_cols=86  Identities=27%  Similarity=0.309  Sum_probs=44.1

Q ss_pred             CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248          187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN  266 (316)
Q Consensus       187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~  266 (316)
                      .|.|+||.|+..|.....+.|++.++. ++..|..|.||||.+...|+...+..|++++.. .+..+.+|.+||++|...
T Consensus       655 ~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~-~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  655 IGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGAD-PNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             cccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccc-ccccCccCcchhhHHhhh
Confidence            355555555555554444444433332 455555555555555555555555555554332 355555555555555555


Q ss_pred             CChhHHHH
Q 048248          267 GHADVVVF  274 (316)
Q Consensus       267 g~~~~~~~  274 (316)
                      .+.+++.+
T Consensus       733 ~~~d~~~l  740 (785)
T KOG0521|consen  733 ANADIVLL  740 (785)
T ss_pred             ccccHHHH
Confidence            44444443


No 112
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.96  E-value=2.8e-05  Score=66.01  Aligned_cols=74  Identities=22%  Similarity=0.227  Sum_probs=60.2

Q ss_pred             HHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh
Q 048248            6 HKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARA   82 (316)
Q Consensus         6 ~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~   82 (316)
                      ..|+.||+.|+.+.|+.+++. |..+|++|....+||.+|+.+||..+|++||++|+-+. ....+|..++ +++.+
T Consensus        38 ~elceacR~GD~d~v~~LVet-gvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~-rdtf~G~RC~-YgaLn  111 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVET-GVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS-RDTFDGDRCH-YGALN  111 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHh-CCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc-ccccCcchhh-hhhhh
Confidence            468999999999999999884 56799999999999999999999999999999998643 2334565553 44443


No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.94  E-value=1.1e-05  Score=77.15  Aligned_cols=88  Identities=35%  Similarity=0.540  Sum_probs=73.5

Q ss_pred             CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248          220 CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLA  299 (316)
Q Consensus       220 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A  299 (316)
                      ..|-|+||.|+..|..-++++|+.++.. ++.+|..|+||||.+...|+...+..+++.++.   .+..+.+|++||++|
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~-vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~---~~a~~~~~~~~l~~a  729 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD-VNALDSKGRTPLHHATASGHTSIACLLLKRGAD---PNAFDPDGKLPLDIA  729 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc-chhhhccCCCcchhhhhhcccchhhhhcccccc---ccccCccCcchhhHH
Confidence            4677999999999999999999987655 799999999999999999999999999987653   456788899999999


Q ss_pred             HHcCChhHHHHH
Q 048248          300 AINNHFNIILVL  311 (316)
Q Consensus       300 ~~~~~~~~~~~L  311 (316)
                      ....+.+.+-+|
T Consensus       730 ~~~~~~d~~~l~  741 (785)
T KOG0521|consen  730 MEAANADIVLLL  741 (785)
T ss_pred             hhhccccHHHHH
Confidence            777777666554


No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.84  E-value=2.6e-05  Score=66.20  Aligned_cols=70  Identities=23%  Similarity=0.305  Sum_probs=58.5

Q ss_pred             cHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHH
Q 048248          224 SPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLH  297 (316)
Q Consensus       224 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~  297 (316)
                      --|..||+.|..+.|+.|++ .+..+|.+|....+||.+|+-.||.+++++|++.|....   .-..+|...+.
T Consensus        38 ~elceacR~GD~d~v~~LVe-tgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~---rdtf~G~RC~Y  107 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVE-TGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS---RDTFDGDRCHY  107 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHH-hCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc---ccccCcchhhh
Confidence            46889999999999999998 566789999999999999999999999999999987542   22355666643


No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.70  E-value=0.0026  Score=32.73  Aligned_cols=23  Identities=43%  Similarity=0.733  Sum_probs=11.6

Q ss_pred             CCcHHHHHHHcCChhHHHHHhhc
Q 048248          292 GNTPLHLAAINNHFNIILVLARN  314 (316)
Q Consensus       292 g~t~L~~A~~~~~~~~~~~Ll~~  314 (316)
                      |.||+|+|+..++.++++.|++.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~   24 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDK   24 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHc
Confidence            44555555555555555555443


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.65  E-value=0.0037  Score=32.11  Aligned_cols=25  Identities=36%  Similarity=0.472  Sum_probs=19.5

Q ss_pred             CChHHHHHHHhCCHHHHHHHHhcCC
Q 048248           38 GDTALHIAARFGHEILVMEILKHQS   62 (316)
Q Consensus        38 g~t~Lh~A~~~~~~~~v~~Ll~~~~   62 (316)
                      |.||||+|+..++.+++++|++.+.
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~   26 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGA   26 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            6788888888888888888887665


No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.53  E-value=0.031  Score=49.86  Aligned_cols=47  Identities=28%  Similarity=0.254  Sum_probs=40.2

Q ss_pred             cccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHH
Q 048248           33 GTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAA   80 (316)
Q Consensus        33 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~   80 (316)
                      ..+..--|+||+|+..|.-.+|.+||.++++ ....|..|+||..++.
T Consensus       425 ~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D-p~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  425 ANDYLTSTFLHYAAAQGARKCVKYFLEEGCD-PSTKDGAGRTPYSLSA  471 (591)
T ss_pred             ccccccchHHHHHHhcchHHHHHHHHHhcCC-chhcccCCCCcccccc
Confidence            3445567999999999999999999999965 5678889999999877


No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.81  E-value=0.064  Score=47.92  Aligned_cols=43  Identities=28%  Similarity=0.295  Sum_probs=25.5

Q ss_pred             CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248          187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS  230 (316)
Q Consensus       187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~  230 (316)
                      --.|+||+|+.+|..+++.+||..+ .++..+|..|.||..++.
T Consensus       429 ltsT~LH~aa~qg~~k~v~~~Leeg-~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  429 LTSTFLHYAAAQGARKCVKYFLEEG-CDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             ccchHHHHHHhcchHHHHHHHHHhc-CCchhcccCCCCcccccc
Confidence            3456666666666666666666555 444556666666666554


No 119
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=94.36  E-value=0.4  Score=38.64  Aligned_cols=45  Identities=18%  Similarity=0.265  Sum_probs=23.8

Q ss_pred             hHHHHHHhhCCCCcc---ccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248          236 SILENLLHSYPDSIE---FIDNKNRNILHLAAQNGHADVVVFILKQPE  280 (316)
Q Consensus       236 ~iv~~Ll~~~~~~~~---~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~  280 (316)
                      .|++..+++|-..++   .+-++|.|-|--|.+++..+++.+||++|.
T Consensus       231 kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  231 KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            345555554433332   234456666666666666666666666554


No 120
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=92.14  E-value=1.5  Score=35.49  Aligned_cols=44  Identities=16%  Similarity=0.049  Sum_probs=20.2

Q ss_pred             HHHHHhhcCCCCcccc---cCCCCCcHHHHHHhcCCHhHHHHHHhhC
Q 048248          202 KIACRLSDEDDSLVYQ---HDCNGQSPLHLASQNGQLSILENLLHSY  245 (316)
Q Consensus       202 ~~~~~ll~~~~~~~~~---~d~~g~tpLh~A~~~g~~~iv~~Ll~~~  245 (316)
                      .+++.++.++-.+++.   +-+.|.|-|--|.++++.+++.+|+++|
T Consensus       231 kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~G  277 (284)
T PF06128_consen  231 KVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYG  277 (284)
T ss_pred             HHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcC
Confidence            4444444444333321   2234555555555555555555555443


No 121
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=90.93  E-value=3.9  Score=32.09  Aligned_cols=51  Identities=6%  Similarity=0.038  Sum_probs=35.1

Q ss_pred             ChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhc
Q 048248           39 DTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMR   93 (316)
Q Consensus        39 ~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~   93 (316)
                      +..|-.|++.+-..+++++-+.....    -...++-+-.||+..++++++..-.
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~q   97 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQ   97 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhh
Confidence            34577788888888877766543321    1245667778999899999888754


No 122
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=87.34  E-value=0.81  Score=30.35  Aligned_cols=47  Identities=15%  Similarity=0.316  Sum_probs=38.7

Q ss_pred             cHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          224 SPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       224 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      .-+..|..+|+.||++.+++...        .....+..|+..-+-+++.+|++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~--------~~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNK--------PDNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhc--------cHHHHHHHHHHHhhHHHHHHHHHh
Confidence            45789999999999998886531        116779999999999999999975


No 123
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=87.19  E-value=1.2  Score=29.49  Aligned_cols=49  Identities=24%  Similarity=0.337  Sum_probs=39.0

Q ss_pred             cHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCC
Q 048248          190 NPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYP  246 (316)
Q Consensus       190 tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~  246 (316)
                      .-+..|+..|..+++...++....     +   ...+..|+...+-++++.|++++.
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~~~-----~---~~~l~~AI~~H~n~i~~~l~~~y~   56 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKNKP-----D---NDCLEYAIKSHNNEIADWLIENYN   56 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhcc-----H---HHHHHHHHHHhhHHHHHHHHHhcC
Confidence            357889999999999988854311     1   357999999999999999998753


No 124
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=83.43  E-value=20  Score=28.22  Aligned_cols=74  Identities=11%  Similarity=0.049  Sum_probs=49.1

Q ss_pred             cHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCC
Q 048248            5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGN   84 (316)
Q Consensus         5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~   84 (316)
                      .--+..|++.+-+..++++-+.....    -....+.+-.||+..+.++|+|+-++-.    +  .+-.+-+-+|...++
T Consensus        47 ~CLl~HAVk~nmL~ILqkyke~L~~~----~~~~q~LFElAC~~qkydiV~WI~qnL~----i--~~~~~iFdIA~~~kD  116 (192)
T PF03158_consen   47 WCLLYHAVKYNMLSILQKYKEDLENE----RYLNQELFELACEEQKYDIVKWIGQNLH----I--YNPEDIFDIAFAKKD  116 (192)
T ss_pred             HHHHHHHHHcCcHHHHHHHHHHhhcc----hhHHHHHHHHHHHHccccHHHHHhhccC----C--CCchhhhhhhhhccc
Confidence            34577899999999887765432211    2345788999999999999999844321    1  123345667777777


Q ss_pred             hhHH
Q 048248           85 FGAA   88 (316)
Q Consensus        85 ~~~~   88 (316)
                      +++.
T Consensus       117 lsLy  120 (192)
T PF03158_consen  117 LSLY  120 (192)
T ss_pred             hhHH
Confidence            6653


No 125
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=58.06  E-value=8.5  Score=35.05  Aligned_cols=30  Identities=17%  Similarity=0.096  Sum_probs=15.8

Q ss_pred             ccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248          249 IEFIDNKNRNILHLAAQNGHADVVVFILKQ  278 (316)
Q Consensus       249 ~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~  278 (316)
                      .+.....++.+|+++...++.+.+......
T Consensus       170 p~~l~gq~sp~lll~~~s~h~~~v~~d~~~  199 (558)
T KOG4335|consen  170 PNYLLGQQSPELLLRFTSAHDDDVAMDEPF  199 (558)
T ss_pred             CchhhccCCchhhhhccCCchhhhhccccc
Confidence            344555555555555555555555544433


No 126
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=55.20  E-value=9.6  Score=30.28  Aligned_cols=49  Identities=24%  Similarity=0.442  Sum_probs=35.1

Q ss_pred             cCCCcHHHHHHHcCChhHHH-HHhcCc-ccccccccCCCCCCcHHHHHHHc
Q 048248          254 NKNRNILHLAAQNGHADVVV-FILKQP-EVEDLINSSDVDGNTPLHLAAIN  302 (316)
Q Consensus       254 ~~g~tpLh~A~~~g~~~~~~-~Ll~~~-~~~~~~~~~d~~g~t~L~~A~~~  302 (316)
                      .+-..|||-|++-++.+++- ++++.. +....+|..|.+|..+|.+|.-+
T Consensus       220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            34567999999999988765 455442 23334677889999999988543


No 127
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=38.27  E-value=7.3  Score=36.09  Aligned_cols=24  Identities=13%  Similarity=0.068  Sum_probs=15.8

Q ss_pred             CCCCCCcHHHHHHHhCChhHHHHh
Q 048248           68 PNHKSETPMHVAARAGNFGAAQIF   91 (316)
Q Consensus        68 ~~~~g~tpLh~A~~~g~~~~~~~l   91 (316)
                      ....+.++.++....|....++..
T Consensus        51 ~~s~~~~~~~l~~~~g~~~~~~~a   74 (503)
T KOG0513|consen   51 GVSLAYLELRLQNIDGDPSAARLA   74 (503)
T ss_pred             hhhhcccHHHHHhccCChHhhHhh
Confidence            345677788888877776645433


No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=29.60  E-value=35  Score=27.26  Aligned_cols=47  Identities=19%  Similarity=0.227  Sum_probs=33.0

Q ss_pred             CCCCcHHHHHHhcCCHhHHH-HHHhh---CCCCccccccCCCcHHHHHHHc
Q 048248          220 CNGQSPLHLASQNGQLSILE-NLLHS---YPDSIEFIDNKNRNILHLAAQN  266 (316)
Q Consensus       220 ~~g~tpLh~A~~~g~~~iv~-~Ll~~---~~~~~~~~d~~g~tpLh~A~~~  266 (316)
                      .+-..|||-|+.-+..+++. ++++.   .|...|..|.+|..+|-+|...
T Consensus       220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            34457899998888888754 44443   2445577788899999888754


No 129
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=26.91  E-value=1.9e+02  Score=26.62  Aligned_cols=158  Identities=15%  Similarity=0.121  Sum_probs=80.0

Q ss_pred             HHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChh
Q 048248            7 KLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFG   86 (316)
Q Consensus         7 ~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~   86 (316)
                      ....|+..++.+.+..++....-.+.-....|.....+--+.|..++...+..           +-.+-+-+|...|+++
T Consensus       267 ~fk~av~~~d~~~v~~~i~~~~ll~~i~~~~~~~i~~fL~~~G~~e~AL~~~~-----------D~~~rFeLAl~lg~L~  335 (443)
T PF04053_consen  267 EFKTAVLRGDFEEVLRMIAASNLLPNIPKDQGQSIARFLEKKGYPELALQFVT-----------DPDHRFELALQLGNLD  335 (443)
T ss_dssp             HHHHHHHTT-HHH-----HHHHTGGG--HHHHHHHHHHHHHTT-HHHHHHHSS------------HHHHHHHHHHCT-HH
T ss_pred             HHHHHHHcCChhhhhhhhhhhhhcccCChhHHHHHHHHHHHCCCHHHHHhhcC-----------ChHHHhHHHHhcCCHH
Confidence            34568888888887676653322222222335555666666666665544321           2345678899999988


Q ss_pred             HHHHhhccCCCCCCCCcchhhhhccCCCCCcHH-HHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhC
Q 048248           87 AAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPL-HNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKS  165 (316)
Q Consensus        87 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L-~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~  165 (316)
                      .+.-......               +..-|.-| -.|...|+.++++.-+....+.             ...+.+....|
T Consensus       336 ~A~~~a~~~~---------------~~~~W~~Lg~~AL~~g~~~lAe~c~~k~~d~-------------~~L~lLy~~~g  387 (443)
T PF04053_consen  336 IALEIAKELD---------------DPEKWKQLGDEALRQGNIELAEECYQKAKDF-------------SGLLLLYSSTG  387 (443)
T ss_dssp             HHHHHCCCCS---------------THHHHHHHHHHHHHTTBHHHHHHHHHHCT-H-------------HHHHHHHHHCT
T ss_pred             HHHHHHHhcC---------------cHHHHHHHHHHHHHcCCHHHHHHHHHhhcCc-------------cccHHHHHHhC
Confidence            8766654311               11123333 3566778888888777754332             14555666778


Q ss_pred             cHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHH-HHHHhh
Q 048248          166 QFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFK-IACRLS  208 (316)
Q Consensus       166 ~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~-~~~~ll  208 (316)
                      +.+.++.|......     ..+-..+++.+...|+.+ ++..|.
T Consensus       388 ~~~~L~kl~~~a~~-----~~~~n~af~~~~~lgd~~~cv~lL~  426 (443)
T PF04053_consen  388 DREKLSKLAKIAEE-----RGDINIAFQAALLLGDVEECVDLLI  426 (443)
T ss_dssp             -HHHHHHHHHHHHH-----TT-HHHHHHHHHHHT-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH-----ccCHHHHHHHHHHcCCHHHHHHHHH
Confidence            88877777643211     111234556666667654 344333


No 130
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=24.62  E-value=21  Score=32.91  Aligned_cols=70  Identities=16%  Similarity=0.181  Sum_probs=41.5

Q ss_pred             CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc---CChhHHHHHhcCcccccccccCCCCCCcH
Q 048248          221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN---GHADVVVFILKQPEVEDLINSSDVDGNTP  295 (316)
Q Consensus       221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~---g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~  295 (316)
                      +.+||+..|+..|..+++..++...-++++-.-.+|..  |.++..   |..+....|..++..   .+..|..|+-+
T Consensus        57 ~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g~s~~~~e~~~hL~~~k~~---~~~tda~g~~~  129 (528)
T KOG1595|consen   57 NQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE--HCAVLGRSVGDTERTYHLRYYKTL---PCVTDARGNCV  129 (528)
T ss_pred             ccccccchhhhcCccccccceeecchhhccccCCCCcc--cchhcccccCCcceeEeccccccc---cCccccCCCcc
Confidence            45688888888888888887776554555555555555  544443   344455555544322   23355556554


No 131
>KOG4335 consensus FERM domain-containing protein KRIT1 [Signal transduction mechanisms]
Probab=21.90  E-value=75  Score=29.29  Aligned_cols=67  Identities=10%  Similarity=-0.138  Sum_probs=44.7

Q ss_pred             cCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHH
Q 048248           14 HGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAA   80 (316)
Q Consensus        14 ~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~   80 (316)
                      .|-...+.+...++...++.....++.+|+++...+|.+.|...........++..-.|+++..+..
T Consensus       153 lg~vs~l~~v~lk~k~~p~~l~gq~sp~lll~~~s~h~~~v~~d~~~~~~~rn~~~~~~re~~~~~e  219 (558)
T KOG4335|consen  153 LGLVSPLLEVQLKPKHQPNYLLGQQSPELLLRFTSAHDDDVAMDEPFLQFRRNVFFPKGRELQIIDE  219 (558)
T ss_pred             eeccCHHHHHhhccccCCchhhccCCchhhhhccCCchhhhhccccchHHhhhhhcccCcchhhhHH
Confidence            3344444455555555555566678999999998899988887776554444555667888876544


No 132
>PF09722 DUF2384:  Protein of unknown function (DUF2384);  InterPro: IPR024467 This domain is found predominantly in proteobacterial proteins. Its function in unknown.
Probab=21.90  E-value=1.2e+02  Score=18.18  Aligned_cols=40  Identities=28%  Similarity=0.352  Sum_probs=24.3

Q ss_pred             CChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHh
Q 048248           15 GYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILK   59 (316)
Q Consensus        15 g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~   59 (316)
                      |+.+..+.|+.. ++    ..-.|+||+-+.........|..+|.
T Consensus         9 gd~~~a~~Wl~~-p~----~~l~g~~Plel~~t~~G~~~V~~~L~   48 (54)
T PF09722_consen    9 GDEDKARRWLRT-PN----PALGGRTPLELLRTEAGAERVLDYLD   48 (54)
T ss_pred             CCHHHHHHHHHC-hH----HHhCCCCHHHHHcChHHHHHHHHHHH
Confidence            778888888863 22    12467888887764333445554443


No 133
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=20.84  E-value=46  Score=31.01  Aligned_cols=46  Identities=17%  Similarity=0.116  Sum_probs=25.3

Q ss_pred             CcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCCh
Q 048248          223 QSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA  269 (316)
Q Consensus       223 ~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~  269 (316)
                      .++++........+.++.++. .....+.....|.|+||.+...++.
T Consensus       137 ~~~~~~~~s~~~~~~~~~~l~-~~~~~~~~~~~g~t~L~~tl~~~~~  182 (503)
T KOG0513|consen  137 NLALRILVSGDKYSGAEVLLT-KYEIADAREVLGNTKLHLTLTKENL  182 (503)
T ss_pred             ccceeeeecCccccceeeccc-ccccchhhhhcCCceeeeeccCCCc
Confidence            455555555555555555554 2333344555666777666665554


Done!