Query 048248
Match_columns 316
No_of_seqs 155 out of 1639
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 13:20:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-47 4.5E-52 335.1 33.6 291 5-316 26-325 (337)
2 1n11_A Ankyrin; clathrin, BAND 100.0 2.7E-47 9.1E-52 344.6 34.2 299 4-316 47-368 (437)
3 1n11_A Ankyrin; clathrin, BAND 100.0 6.9E-47 2.4E-51 341.9 34.0 298 4-315 14-334 (437)
4 1wdy_A 2-5A-dependent ribonucl 100.0 7.6E-45 2.6E-49 309.4 29.9 258 38-315 5-276 (285)
5 2fo1_E LIN-12 protein; beta-ba 100.0 2E-45 7E-50 325.5 19.1 290 4-316 37-370 (373)
6 3utm_A Tankyrase-1; tankyrase, 100.0 1.9E-43 6.4E-48 309.7 30.6 285 4-315 24-332 (351)
7 1wdy_A 2-5A-dependent ribonucl 100.0 5.8E-43 2E-47 297.7 30.3 265 4-281 5-278 (285)
8 4g8k_A 2-5A-dependent ribonucl 100.0 5.7E-43 1.9E-47 305.7 28.3 261 36-316 23-297 (337)
9 3ljn_A Hypothetical protein; a 100.0 1.4E-43 4.7E-48 312.9 16.3 270 30-314 12-311 (364)
10 3d9h_A CDNA FLJ77766, highly s 100.0 3.9E-42 1.3E-46 293.5 23.1 254 35-314 12-275 (285)
11 2xai_A ASB-9, ankyrin repeat a 100.0 4.1E-42 1.4E-46 289.7 21.5 253 37-313 2-259 (261)
12 1yyh_A HN1;, notch 1, ankyrin 100.0 1.1E-41 3.8E-46 285.8 21.5 230 30-313 2-244 (253)
13 3d9h_A CDNA FLJ77766, highly s 100.0 1.9E-41 6.4E-46 289.3 23.3 252 4-279 15-276 (285)
14 1oy3_D Transcription factor in 100.0 9.5E-42 3.2E-46 290.2 20.1 259 32-305 3-271 (282)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 2.3E-41 7.8E-46 283.9 21.9 212 65-316 3-214 (253)
16 3utm_A Tankyrase-1; tankyrase, 100.0 5.4E-41 1.9E-45 294.1 25.0 263 32-316 18-304 (351)
17 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-41 4.6E-46 301.1 16.4 257 4-280 94-370 (373)
18 3ljn_A Hypothetical protein; a 100.0 6.3E-40 2.1E-44 289.4 21.8 265 4-279 20-312 (364)
19 3b7b_A Euchromatic histone-lys 100.0 2.7E-39 9.1E-44 268.4 24.2 227 32-313 5-231 (237)
20 2xai_A ASB-9, ankyrin repeat a 100.0 1.2E-39 4E-44 274.7 22.3 250 4-277 3-259 (261)
21 1k1a_A B-cell lymphoma 3-encod 100.0 4.8E-40 1.6E-44 273.4 19.3 233 32-315 3-239 (241)
22 1k1a_A B-cell lymphoma 3-encod 100.0 8.1E-40 2.8E-44 272.0 20.3 226 3-277 8-237 (241)
23 2dzn_A Probable 26S proteasome 100.0 2.3E-39 7.7E-44 267.1 21.4 224 38-314 2-227 (228)
24 3b7b_A Euchromatic histone-lys 100.0 1E-38 3.5E-43 264.9 25.0 220 4-276 11-230 (237)
25 3aji_A 26S proteasome non-ATPa 100.0 1.2E-38 4.3E-43 263.3 22.3 224 37-315 5-228 (231)
26 1s70_B 130 kDa myosin-binding 100.0 1.7E-39 5.9E-44 278.8 16.7 274 10-313 4-285 (299)
27 4b93_B Ankyrin repeat domain-c 100.0 1.1E-39 3.9E-44 275.6 14.8 217 33-268 6-230 (269)
28 3aji_A 26S proteasome non-ATPa 100.0 2.4E-38 8.4E-43 261.5 22.0 193 113-316 4-196 (231)
29 4b93_B Ankyrin repeat domain-c 100.0 2E-39 6.8E-44 274.1 12.9 223 68-304 7-230 (269)
30 1oy3_D Transcription factor in 100.0 1.2E-37 4.2E-42 264.8 22.9 256 3-267 8-269 (282)
31 2dzn_A Probable 26S proteasome 100.0 2.6E-37 8.9E-42 254.8 21.7 222 5-277 3-226 (228)
32 3eu9_A Huntingtin-interacting 100.0 1.1E-36 3.8E-41 252.5 23.6 229 32-279 3-233 (240)
33 2f8y_A Notch homolog 1, transl 100.0 1E-36 3.6E-41 250.4 22.0 214 83-316 2-215 (223)
34 3eu9_A Huntingtin-interacting 100.0 2E-36 6.9E-41 251.0 23.6 227 68-315 5-233 (240)
35 3kea_A K1L; tropism, ANK repea 100.0 5.8E-37 2E-41 261.5 19.2 237 11-280 6-245 (285)
36 3kea_A K1L; tropism, ANK repea 100.0 2.3E-37 7.9E-42 264.0 16.5 233 49-315 10-244 (285)
37 2f8y_A Notch homolog 1, transl 100.0 1.5E-36 5.2E-41 249.4 19.2 214 49-280 2-215 (223)
38 3hra_A Ankyrin repeat family p 100.0 1.8E-35 6E-40 239.1 22.0 194 113-315 3-201 (201)
39 1sw6_A Regulatory protein SWI6 100.0 1.1E-37 3.9E-42 270.9 9.6 257 13-303 28-327 (327)
40 1s70_B 130 kDa myosin-binding 100.0 7.2E-36 2.5E-40 256.2 19.6 247 4-278 40-286 (299)
41 1ikn_D Protein (I-kappa-B-alph 100.0 1.8E-36 6E-41 251.4 11.3 219 34-299 4-226 (236)
42 2rfa_A Transient receptor pote 100.0 1.2E-34 4.2E-39 239.5 22.0 194 114-315 2-220 (232)
43 2rfa_A Transient receptor pote 100.0 1.8E-34 6.3E-39 238.5 21.6 211 37-280 2-221 (232)
44 1ikn_D Protein (I-kappa-B-alph 100.0 6.1E-36 2.1E-40 248.1 11.5 200 110-316 3-208 (236)
45 3hra_A Ankyrin repeat family p 100.0 6.4E-34 2.2E-38 230.0 22.4 194 70-279 3-201 (201)
46 2etb_A Transient receptor pote 100.0 4.1E-34 1.4E-38 240.0 17.1 198 114-315 1-244 (256)
47 2pnn_A Transient receptor pote 100.0 1.4E-34 4.9E-39 245.1 14.4 207 109-316 7-257 (273)
48 4gpm_A Engineered protein OR26 100.0 1.4E-33 4.9E-38 221.3 18.0 155 156-316 6-160 (169)
49 2pnn_A Transient receptor pote 100.0 3E-34 1E-38 243.1 15.0 221 30-280 5-257 (273)
50 2etb_A Transient receptor pote 100.0 1.7E-33 5.8E-38 236.2 15.5 201 72-280 2-245 (256)
51 1sw6_A Regulatory protein SWI6 100.0 2.8E-34 9.4E-39 249.6 10.6 228 14-267 57-327 (327)
52 3jxi_A Vanilloid receptor-rela 100.0 2.6E-33 8.8E-38 235.6 15.8 201 112-315 2-248 (260)
53 3jxi_A Vanilloid receptor-rela 100.0 1.9E-32 6.4E-37 230.3 13.7 204 70-281 3-250 (260)
54 4hbd_A KN motif and ankyrin re 100.0 1.8E-32 6.2E-37 232.6 13.5 194 115-316 76-274 (276)
55 4gpm_A Engineered protein OR26 100.0 3.5E-31 1.2E-35 207.6 18.6 156 117-281 6-161 (169)
56 4hbd_A KN motif and ankyrin re 100.0 2.5E-31 8.5E-36 225.5 15.5 193 72-279 76-273 (276)
57 2rfm_A Putative ankyrin repeat 100.0 5.9E-31 2E-35 211.1 16.3 160 150-315 31-190 (192)
58 3v31_A Ankyrin repeat family A 100.0 1.7E-30 5.7E-35 203.8 17.2 157 153-315 2-158 (167)
59 1ihb_A P18-INK4C(INK6), cyclin 100.0 8.6E-31 2.9E-35 204.2 14.3 157 154-316 5-161 (162)
60 3v30_A DNA-binding protein rfx 100.0 2E-30 6.9E-35 204.3 16.4 154 156-314 4-157 (172)
61 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.4E-30 8.2E-35 200.5 16.4 155 154-315 2-156 (156)
62 2y1l_E Darpin-8.4; hydrolase-i 100.0 7.4E-30 2.5E-34 200.5 17.6 158 152-315 12-169 (169)
63 2rfm_A Putative ankyrin repeat 100.0 1.6E-29 5.6E-34 202.7 17.1 163 108-279 28-190 (192)
64 3twr_A Tankyrase-2; ankyrin re 100.0 3E-30 1E-34 201.8 12.2 160 151-316 5-164 (165)
65 2aja_A Ankyrin repeat family p 100.0 3.4E-32 1.2E-36 239.3 0.5 259 15-312 77-369 (376)
66 3f6q_A Integrin-linked protein 100.0 7.4E-30 2.5E-34 202.4 13.0 157 154-315 5-161 (179)
67 3v30_A DNA-binding protein rfx 100.0 4.5E-29 1.5E-33 196.5 16.8 170 115-295 2-171 (172)
68 2aja_A Ankyrin repeat family p 100.0 1.6E-31 5.4E-36 235.1 2.6 245 38-315 65-342 (376)
69 1awc_B Protein (GA binding pro 100.0 7.7E-29 2.6E-33 191.4 17.3 150 155-311 3-152 (153)
70 1ihb_A P18-INK4C(INK6), cyclin 100.0 4.6E-29 1.6E-33 194.4 15.6 158 114-280 4-161 (162)
71 2vge_A RELA-associated inhibit 100.0 7.5E-32 2.6E-36 222.3 -2.2 189 110-311 16-207 (229)
72 3v31_A Ankyrin repeat family A 100.0 4.7E-28 1.6E-32 189.7 17.7 158 114-280 2-159 (167)
73 2vge_A RELA-associated inhibit 100.0 9E-31 3.1E-35 215.9 0.8 202 21-242 2-208 (229)
74 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.1E-27 3.7E-32 188.1 17.6 159 112-279 11-169 (169)
75 1awc_B Protein (GA binding pro 100.0 1.1E-27 3.7E-32 185.0 16.9 151 115-275 2-152 (153)
76 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.3E-28 2.5E-32 186.4 15.8 154 115-278 2-155 (156)
77 3twr_A Tankyrase-2; ankyrin re 100.0 7.3E-28 2.5E-32 188.3 12.9 161 111-280 4-164 (165)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 6.2E-29 2.1E-33 206.4 6.7 182 113-304 3-193 (239)
79 3f6q_A Integrin-linked protein 99.9 3.4E-27 1.2E-31 187.0 14.7 161 113-281 3-163 (179)
80 1d9s_A Cyclin-dependent kinase 99.9 2.3E-27 7.8E-32 179.5 11.8 132 179-316 3-135 (136)
81 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1E-27 3.5E-32 199.0 10.8 156 153-315 4-162 (239)
82 3t8k_A Uncharacterized protein 99.9 8.7E-27 3E-31 185.6 9.3 153 154-314 6-176 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-25 3.9E-30 174.2 11.0 143 150-299 8-151 (156)
84 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-25 1E-29 167.8 12.6 125 186-315 12-136 (136)
85 3t8k_A Uncharacterized protein 99.9 8.4E-26 2.9E-30 179.9 8.8 156 115-279 6-177 (186)
86 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-24 4.8E-29 161.4 14.3 125 187-316 1-125 (126)
87 1d9s_A Cyclin-dependent kinase 99.9 3.2E-25 1.1E-29 167.6 10.8 128 148-279 6-134 (136)
88 1bi7_B P16INK4A, MTS1, multipl 99.9 2.7E-25 9.2E-30 172.1 10.5 129 182-316 6-135 (156)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-24 5.8E-29 163.6 13.0 126 151-279 11-136 (136)
90 3deo_A Signal recognition part 99.9 8.9E-25 3E-29 173.7 11.9 139 153-315 43-182 (183)
91 3ui2_A Signal recognition part 99.9 8.3E-25 2.8E-29 182.0 11.7 138 153-314 44-182 (244)
92 3c5r_A BARD-1, BRCA1-associate 99.9 2.5E-25 8.7E-30 168.3 6.8 127 183-314 5-131 (137)
93 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.7E-23 5.9E-28 155.4 14.1 124 153-279 1-124 (126)
94 3ehr_A Osteoclast-stimulating 99.9 2.2E-24 7.4E-29 176.8 7.2 131 151-283 70-200 (222)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.3E-23 4.5E-28 179.9 10.7 140 154-305 151-299 (301)
96 3ehr_A Osteoclast-stimulating 99.9 9.3E-24 3.2E-28 173.0 8.4 129 183-315 68-196 (222)
97 3aaa_C Myotrophin, protein V-1 99.9 1.3E-23 4.6E-28 155.8 8.4 111 185-300 4-114 (123)
98 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-23 3.9E-28 159.2 7.1 126 150-278 6-131 (137)
99 1dcq_A PYK2-associated protein 99.9 1.2E-22 4.1E-27 172.0 13.3 193 111-316 62-262 (278)
100 3deo_A Signal recognition part 99.9 1.5E-23 5.2E-28 166.6 6.1 124 184-313 40-164 (183)
101 3ui2_A Signal recognition part 99.9 6.1E-23 2.1E-27 170.7 9.8 140 112-278 42-182 (244)
102 2b0o_E UPLC1; arfgap, structur 99.9 9.2E-23 3.2E-27 174.6 11.1 146 115-269 151-299 (301)
103 3aaa_C Myotrophin, protein V-1 99.9 8.5E-23 2.9E-27 151.4 9.3 113 153-268 6-118 (123)
104 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9.7E-22 3.3E-26 138.2 10.8 92 221-316 1-92 (93)
105 1dcq_A PYK2-associated protein 99.9 1.7E-21 6E-26 164.8 13.7 125 154-280 130-262 (278)
106 3jue_A Arfgap with coiled-coil 99.9 2.1E-21 7.3E-26 170.0 12.3 148 153-303 198-348 (368)
107 3lvq_E ARF-GAP with SH3 domain 99.8 8.9E-21 3E-25 173.5 13.2 123 155-280 133-264 (497)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-20 5.9E-25 131.7 10.8 91 187-279 1-91 (93)
109 3jue_A Arfgap with coiled-coil 99.8 1.3E-20 4.6E-25 165.0 11.7 128 183-315 194-324 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.8 2.3E-20 7.8E-25 170.8 13.4 124 188-316 132-264 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 3.9E-20 1.3E-24 135.2 9.2 108 183-295 4-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 2.2E-19 7.4E-24 131.2 9.3 108 150-260 5-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 1.2E-18 4.2E-23 126.2 8.9 92 216-311 18-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 4E-18 1.4E-22 123.5 9.0 92 182-275 18-109 (110)
115 3zrh_A Ubiquitin thioesterase 44.3 45 0.0016 28.8 5.9 50 11-60 29-91 (454)
116 1gp8_A Protein (scaffolding pr 43.3 17 0.00057 19.5 2.0 17 296-312 17-33 (40)
No 1
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-47 Score=335.11 Aligned_cols=291 Identities=22% Similarity=0.236 Sum_probs=248.6
Q ss_pred cHHHHHHHhcCChHHHHHHHHhcCCccccccC-CCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQ-NGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~-~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
.++|+.|++.|+.+.|+.|+.. |.+++.++. .|+||||+|+..|+.++|++|++.++.. ...+..+.+|++.++..+
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred ChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-hhhccCCCchhHHHHhcc
Confidence 5689999999999999888876 567887764 5999999999999999999999999874 557889999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccc----cccccCCCCCchHHH
Q 048248 84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRY----NNKAKQGPNNLTLLH 159 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~----~~~~~~~~~~~t~lh 159 (316)
....+..++..+.. ++..|..|+||||+|+..++.++++.++..+..+... ......+..|.||||
T Consensus 104 ~~~~~~~~~~~~~~----------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~ 173 (337)
T 4g8k_A 104 SVKLLKLFLSKGAD----------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM 173 (337)
T ss_dssp CHHHHHHHHTTTCC----------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHH
T ss_pred cchhhHHhhhccch----------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHH
Confidence 99999999876543 4457899999999999999999999999998765311 111234567899999
Q ss_pred HHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCc---H-HHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248 160 SAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH---F-KIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL 235 (316)
Q Consensus 160 ~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~---~-~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 235 (316)
+|+..|+.++++.||...+.+++.+|..|.||+|+++..+. . .+++.|+ ..+.+++.+|..|+||||+|+..|+.
T Consensus 174 ~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl-~~gad~n~~d~~g~t~L~~a~~~~~~ 252 (337)
T 4g8k_A 174 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLL-DHGADVNVRGERGKTPLILAVEKKHL 252 (337)
T ss_dssp HHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHH-HTTCCTTCCCGGGCCHHHHHHHTTCH
T ss_pred HHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhhhh
Confidence 99999999999999987777899999999999999887554 2 3455555 45566788999999999999999999
Q ss_pred hHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 236 SILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 236 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
++++.|+...+.+++.+|..|+||||+|++.|+.+++++|++.|. |-++.+|||+|++.|+.++|++|+++|
T Consensus 253 ~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA--------d~n~~~~L~~A~~~~~~~iv~~Ll~~G 324 (337)
T 4g8k_A 253 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA--------STDCGDLVMTARRNYDHSLVKVLLSHG 324 (337)
T ss_dssp HHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC--------SSTTCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC--------CCCCCCHHHHHHHcCCHHHHHHHHHCc
Confidence 999999988777889999999999999999999999999999874 224568999999999999999999987
Q ss_pred C
Q 048248 316 S 316 (316)
Q Consensus 316 ~ 316 (316)
+
T Consensus 325 A 325 (337)
T 4g8k_A 325 A 325 (337)
T ss_dssp C
T ss_pred C
Confidence 4
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.7e-47 Score=344.57 Aligned_cols=299 Identities=25% Similarity=0.365 Sum_probs=238.9
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..+|||.|+..|+.+.++.|+.. +.+++..+..|+||||+|+..|+.++|++|++.+++. +..+..|.||||+|+..|
T Consensus 47 ~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g 124 (437)
T 1n11_A 47 VETPLHMAARAGHTEVAKYLLQN-KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREG 124 (437)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 45799999999999999777765 4667888889999999999999999999999988764 556778999999999999
Q ss_pred ChhHHHHhhccCCCCCCCC--cc---------------------hhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCC
Q 048248 84 NFGAAQIFMRPHGNGNNTG--TF---------------------DDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPE 140 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~--~~---------------------~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~ 140 (316)
+.+++++|++.+....... +. ...++..+..|.||||+|+..++.++++.|+..+..
T Consensus 125 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 204 (437)
T 1n11_A 125 HVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS 204 (437)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC
T ss_pred CHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 9999998887655432111 00 001233466788888888888888888888877655
Q ss_pred cccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCC
Q 048248 141 PIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDC 220 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~ 220 (316)
+. ..+..|.||||+|+..|+.++++.|+..+. .++.++..|.||||+|+..|+.++++.|+..+. +.+..|.
T Consensus 205 ~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~ 276 (437)
T 1n11_A 205 PH------SPAWNGYTPLHIAAKQNQVEVARSLLQYGG-SANAESVQGVTPLHLAAQEGHAEMVALLLSKQA-NGNLGNK 276 (437)
T ss_dssp SC------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCCT
T ss_pred CC------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-CCCCCCC
Confidence 32 234567889999999999888888887664 478888889999999999999998888887654 4566788
Q ss_pred CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHH
Q 048248 221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAA 300 (316)
Q Consensus 221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 300 (316)
.|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+
T Consensus 277 ~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga---d~n~~~~~g~t~L~~A~ 352 (437)
T 1n11_A 277 SGLTPLHLVAQEGHVPVADVLIKHGV-MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQA---DVNAKTKLGYSPLHQAA 352 (437)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTC---CTTCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCc-cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCC---CCCCCCCCCCCHHHHHH
Confidence 89999999999999999999998754 468888899999999999999999999998764 46778888999999999
Q ss_pred HcCChhHHHHHhhcCC
Q 048248 301 INNHFNIILVLARNMS 316 (316)
Q Consensus 301 ~~~~~~~~~~Ll~~~~ 316 (316)
+.|+.++|++|+++++
T Consensus 353 ~~g~~~iv~~Ll~~ga 368 (437)
T 1n11_A 353 QQGHTDIVTLLLKNGA 368 (437)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HCChHHHHHHHHHCcC
Confidence 9999999999998763
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=6.9e-47 Score=341.86 Aligned_cols=298 Identities=25% Similarity=0.340 Sum_probs=207.7
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..+|||.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..|+.++|++|++.++.. +..+.+|+||||+|+..|
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g 91 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQR-GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAARIG 91 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCC
Confidence 56799999999999999888866 5678888999999999999999999999999998874 567889999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcc--h-----------h----------hhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCC
Q 048248 84 NFGAAQIFMRPHGNGNNTGTF--D-----------D----------ILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPE 140 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~--~-----------~----------~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~ 140 (316)
+.+++++|++.+.+.+..... . + .....+..|.||||+|+..++.++++.|+..+..
T Consensus 92 ~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~ 171 (437)
T 1n11_A 92 HTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 171 (437)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 999999999976653321100 0 0 0111234455555555555555555555554433
Q ss_pred cccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCC
Q 048248 141 PIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDC 220 (316)
Q Consensus 141 ~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~ 220 (316)
+ +..+..|.||||+|+..++.++++.|+..+. .++..+..|.||||+|+..|+.++++.|++.+.. ++..+.
T Consensus 172 ~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~ 243 (437)
T 1n11_A 172 P------NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG-SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-ANAESV 243 (437)
T ss_dssp T------TCCCSSCCCHHHHHHHTTCHHHHHHHGGGTC-CSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCT
T ss_pred C------CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCC
Confidence 2 2234455666666666666666666655443 2455566666666666666666666666654433 345566
Q ss_pred CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHH
Q 048248 221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAA 300 (316)
Q Consensus 221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 300 (316)
.|.||||+|+..|+.+++++|++.+. .++..+..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+
T Consensus 244 ~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---~~~~~~~~g~t~L~~A~ 319 (437)
T 1n11_A 244 QGVTPLHLAAQEGHAEMVALLLSKQA-NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV---MVDATTRMGYTPLHVAS 319 (437)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTC---CTTCCCSSCCCHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCc---cCCCCCCCCCCHHHHHH
Confidence 67777777777777777777776543 346667777777777777777777777776542 35667778888888888
Q ss_pred HcCChhHHHHHhhcC
Q 048248 301 INNHFNIILVLARNM 315 (316)
Q Consensus 301 ~~~~~~~~~~Ll~~~ 315 (316)
..|+.++|++|++++
T Consensus 320 ~~g~~~~v~~Ll~~g 334 (437)
T 1n11_A 320 HYGNIKLVKFLLQHQ 334 (437)
T ss_dssp HSSCSHHHHHHHHTT
T ss_pred HcCcHHHHHHHHhcC
Confidence 888888888888765
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=7.6e-45 Score=309.36 Aligned_cols=258 Identities=21% Similarity=0.207 Sum_probs=155.7
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCc
Q 048248 38 GDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNT 117 (316)
Q Consensus 38 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t 117 (316)
|.||||.|++.|+.++|++|++.+.......+..|+||||+|+..|+.+++++|++.+.. +...|..|.|
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------~~~~~~~g~t 74 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD----------PVLRKKNGAT 74 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------TTCCCTTCCC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----------CcccCCCCCC
Confidence 455555555555555555555555443332244455555555555555555555554322 1223455555
Q ss_pred HHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccc----------ccC
Q 048248 118 PLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVR----------DER 187 (316)
Q Consensus 118 ~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~----------d~~ 187 (316)
|||+|+..++.++++.|+..+..+. ..+..|.||||+|+..|+.++++.|+..+.+ ++.. +..
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~ 147 (285)
T 1wdy_A 75 PFLLAAIAGSVKLLKLFLSKGADVN------ECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKG 147 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTT------CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC------ccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHHhhccC
Confidence 5555555555555555555543321 2233455566666665665555555554432 3333 566
Q ss_pred CCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC----HhHHHHHHhhCCCCccccccCCCcHHHHH
Q 048248 188 NRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ----LSILENLLHSYPDSIEFIDNKNRNILHLA 263 (316)
Q Consensus 188 g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A 263 (316)
|.||||+|+..|+.++++.|++..+.+++..|..|.||||+|+..++ .+++++|++.+. +++.+|..|+||||+|
T Consensus 148 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~-~~~~~~~~g~t~L~~A 226 (285)
T 1wdy_A 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA-DVNVRGERGKTPLILA 226 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTC-CSSCCCTTSCCHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCC-CCCCcCCCCCcHHHHH
Confidence 77777777777777777777766555666667777777777777777 677777776543 3566777777777777
Q ss_pred HHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 264 AQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 264 ~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
+..|+.+++++|++... ..++.+|..|+||||+|++.++.+++++|+++|
T Consensus 227 ~~~~~~~~v~~Ll~~~g--~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~G 276 (285)
T 1wdy_A 227 VEKKHLGLVQRLLEQEH--IEINDTDSDGKTALLLAVELKLKKIAELLCKRG 276 (285)
T ss_dssp HHTTCHHHHHHHHHSSS--CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHcCCHHHHHHHHhccC--CCccccCCCCCcHHHHHHHcCcHHHHHHHHHcC
Confidence 77777777777776322 235666777777777777777777777777765
No 5
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=2e-45 Score=325.55 Aligned_cols=290 Identities=21% Similarity=0.285 Sum_probs=219.0
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCC-----------------------ccccccCCCChHHHHHHHhCCHHHHHHHHhc
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGN-----------------------RILGTSQNGDTALHIAARFGHEILVMEILKH 60 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~-----------------------~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 60 (316)
...+|+.++..|+.+.++.++.+... ....++..|.||||+|+..+. +++++|+..
T Consensus 37 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~~ 115 (373)
T 2fo1_E 37 SQHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSY-AITEPITRE 115 (373)
T ss_dssp ---------------------------------------------------------CCCHHHHHHHSSS-CCCSCCSTT
T ss_pred cccccccccCCccccchhhhhhhhccccCccccCCCCCccccccccccccccCCCCCCccHHHHHhcCCc-hHHHHhccc
Confidence 45677788888887777655422210 122456789999999999664 677777653
Q ss_pred CCCccccCC-CCCCcHHHHHHHhCChhHHHHhh--------ccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHH
Q 048248 61 QSDLVSVPN-HKSETPMHVAARAGNFGAAQIFM--------RPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMA 131 (316)
Q Consensus 61 ~~~~~~~~~-~~g~tpLh~A~~~g~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~ 131 (316)
. ++..+ ..|+||||+|+..|+.+++++|+ +.+.+ ++..|..|.||||+|+..++.+++
T Consensus 116 ~---~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~----------vn~~d~~g~TpL~~A~~~g~~~iv 182 (373)
T 2fo1_E 116 S---VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD----------VNAMDCDENTPLMLAVLARRRRLV 182 (373)
T ss_dssp T---TTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC----------TTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred c---ccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC----------CcCCCCCCCCHHHHHHHcChHHHH
Confidence 2 33445 68999999999999998888776 33332 445689999999999999999999
Q ss_pred HHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcc--ccccccccCCCcHHHHHHHhC---cHHHHHH
Q 048248 132 FTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKR--DLINVRDERNRNPLRYAAALG---HFKIACR 206 (316)
Q Consensus 132 ~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~--~~~~~~d~~g~tpLh~A~~~g---~~~~~~~ 206 (316)
+.|+..++++. ..+..|.||||+|+..|+.++++.|+..+. ..++..|..|.||||+|+..+ +.++++.
T Consensus 183 ~~Ll~~ga~~~------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~ 256 (373)
T 2fo1_E 183 AYLMKAGADPT------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKL 256 (373)
T ss_dssp HHHHHTTCCSC------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHH
T ss_pred HHHHHCCCCCc------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHH
Confidence 99999887652 356688999999999999999999987652 457889999999999999988 7899999
Q ss_pred hhcCCCCccc-------ccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 207 LSDEDDSLVY-------QHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 207 ll~~~~~~~~-------~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|+..+..... ..|..|+||||+|+..|+.++|++|++.++.+++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 257 Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g 336 (373)
T 2fo1_E 257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQG 336 (373)
T ss_dssp HHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 9987654321 256789999999999999999999999887788999999999999999999999999999986
Q ss_pred ccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 280 EVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 280 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
. .++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 337 a---d~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 337 A---SVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp C---CSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred C---CccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 4 467889999999999999999999999999763
No 6
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.9e-43 Score=309.72 Aligned_cols=285 Identities=19% Similarity=0.240 Sum_probs=241.1
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..++||.|+..|+.+.++.++...+..++..+..|+||||+|+..|+.++|++|++.+.+ ++..+..|+||||+|+..|
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g 102 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-VHAKDKGGLVPLHNACSYG 102 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTT
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCccCCCCCcHHHHHHHCC
Confidence 467999999999999999999887888889999999999999999999999999999877 4567889999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHH--
Q 048248 84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSA-- 161 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A-- 161 (316)
+.+++++|++.+.. ++..|..|+||||+|+..++.++++.|++.+.++. ..+..|.||+++|
T Consensus 103 ~~~iv~~Ll~~g~~----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~~~l~~a~~ 166 (351)
T 3utm_A 103 HYEVTELLLKHGAC----------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT------LVNCHGKSAVDMAPT 166 (351)
T ss_dssp CHHHHHHHHHTTCC----------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT------CCCTTSCCHHHHCSS
T ss_pred CHHHHHHHHHCCCC----------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc------cccCCCCcchHHHhh
Confidence 99999999987544 34468899999999999999999999999887653 2355677777654
Q ss_pred -------------------HHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHh---CcHHHHHHhhcCCCCcccccC
Q 048248 162 -------------------IIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAAL---GHFKIACRLSDEDDSLVYQHD 219 (316)
Q Consensus 162 -------------------~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~---g~~~~~~~ll~~~~~~~~~~d 219 (316)
+..++...+..++..... ....+..|.||||+|+.. +..++++.|+..+ .+++.+|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g-~~~~~~~ 244 (351)
T 3utm_A 167 PELRERLTYEFKGHSLLQAAREADLAKVKKTLALEII-NFKQPQSHETALHCAVASLHPKRKQVAELLLRKG-ANVNEKN 244 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCT-TCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTT-CCTTCCC
T ss_pred hhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcc-cccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcC-CCcCCcC
Confidence 455666666666655432 344677899999999998 4567888887665 4567789
Q ss_pred CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248 220 CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLA 299 (316)
Q Consensus 220 ~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A 299 (316)
..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||+|+|
T Consensus 245 ~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---d~~~~~~~g~tal~~a 320 (351)
T 3utm_A 245 KDFMTPLHVAAERAHNDVMEVLHKHG-AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS---DPSIISLQGFTAAQMG 320 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHS
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC---CCCCcCCCCCChhhhh
Confidence 99999999999999999999999875 4579999999999999999999999999999875 3677899999999998
Q ss_pred HHcCChhHHHHHhhcC
Q 048248 300 AINNHFNIILVLARNM 315 (316)
Q Consensus 300 ~~~~~~~~~~~Ll~~~ 315 (316)
+.+++++|.++.
T Consensus 321 ----~~~~~~~l~~~~ 332 (351)
T 3utm_A 321 ----NEAVQQILSEST 332 (351)
T ss_dssp ----CHHHHHHHHHC-
T ss_pred ----hHHHHHHHHhcc
Confidence 678888887754
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.8e-43 Score=297.74 Aligned_cols=265 Identities=22% Similarity=0.225 Sum_probs=229.6
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccc-cCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHh
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGT-SQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARA 82 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~ 82 (316)
..++|+.|++.|+.+.++.++..+ .+++.. +..|+||||+|+..|+.+++++|++.+... ...+.+|.||||+|+..
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHc
Confidence 467999999999999998888765 456655 788999999999999999999999998774 55788999999999999
Q ss_pred CChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccccccc----ccCCCCCchHH
Q 048248 83 GNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNK----AKQGPNNLTLL 158 (316)
Q Consensus 83 g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~----~~~~~~~~t~l 158 (316)
|+.+++++|++.+.. +...|..|+||||+|+..++.++++.|+..+..+...... ...+..|.|||
T Consensus 83 ~~~~~v~~Ll~~g~~----------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L 152 (285)
T 1wdy_A 83 GSVKLLKLFLSKGAD----------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATAL 152 (285)
T ss_dssp TCHHHHHHHHHTTCC----------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHH
T ss_pred CCHHHHHHHHHcCCC----------CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHH
Confidence 999999999987544 3456889999999999999999999999998765321100 01156789999
Q ss_pred HHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCc----HHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC
Q 048248 159 HSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGH----FKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ 234 (316)
Q Consensus 159 h~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~----~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 234 (316)
|+|+..|+.++++.|+...+..++.+|..|.||||+|+..++ .++++.|++.+ .+++.+|..|.||||+|+..|+
T Consensus 153 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~ 231 (285)
T 1wdy_A 153 MDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLILAVEKKH 231 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTT-CCSSCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHcCC
Confidence 999999999999999988667789999999999999999998 77888888765 4567789999999999999999
Q ss_pred HhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccc
Q 048248 235 LSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEV 281 (316)
Q Consensus 235 ~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~ 281 (316)
.+++++|++..+.+++.+|..|+||||+|+..|+.+++++|++.|..
T Consensus 232 ~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~ 278 (285)
T 1wdy_A 232 LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278 (285)
T ss_dssp HHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC
T ss_pred HHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC
Confidence 99999999966777899999999999999999999999999998753
No 8
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.7e-43 Score=305.74 Aligned_cols=261 Identities=21% Similarity=0.195 Sum_probs=224.6
Q ss_pred CCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCC
Q 048248 36 QNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEG 115 (316)
Q Consensus 36 ~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g 115 (316)
..|.||||.|++.|+.++|++||+.|+++....+..|+||||+|+..|+.+++++|++.++.. ..++..+
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~----------~~~~~~~ 92 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP----------VLRKKNG 92 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT----------TCCCTTC
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch----------hhhccCC
Confidence 357899999999999999999999998754434456999999999999999999999976553 3468899
Q ss_pred CcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccc----------ccc
Q 048248 116 NTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLIN----------VRD 185 (316)
Q Consensus 116 ~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~----------~~d 185 (316)
.+|++.++..+...+...++..+.+. +..+..|.||||+|+..|+.++++.|+..+.+ ++ ..+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~-~~~~~~~~~~~~~~~ 165 (337)
T 4g8k_A 93 ATPFILAAIAGSVKLLKLFLSKGADV------NECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLR 165 (337)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTTCCT------TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCC-----CT
T ss_pred CchhHHHHhcccchhhHHhhhccchh------hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCC-cchhhcccccccccc
Confidence 99999999999999999998876654 33566899999999999999999999987643 33 345
Q ss_pred cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC----HhHHHHHHhhCCCCccccccCCCcHHH
Q 048248 186 ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ----LSILENLLHSYPDSIEFIDNKNRNILH 261 (316)
Q Consensus 186 ~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~----~~iv~~Ll~~~~~~~~~~d~~g~tpLh 261 (316)
..|.||||+|++.|+.++++.|+...+.+++.+|..|.||+|.++..+. ..++++|++.+ .+++.+|..|+||||
T Consensus 166 ~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~g-ad~n~~d~~g~t~L~ 244 (337)
T 4g8k_A 166 KGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG-ADVNVRGERGKTPLI 244 (337)
T ss_dssp TCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTT-CCTTCCCGGGCCHHH
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCC-CCCCCcCCCCCCHHH
Confidence 6799999999999999999999988888888899999999998876554 35788888765 457999999999999
Q ss_pred HHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 262 LAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 262 ~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
+|+..|+.+++++|+.... ..++.+|.+|+||||+|++.|+.++|++|+++|+
T Consensus 245 ~a~~~~~~~~v~~Ll~~~~--~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 297 (337)
T 4g8k_A 245 LAVEKKHLGLVQRLLEQEH--IEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 297 (337)
T ss_dssp HHHHTTCHHHHHHHHTSTT--CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHhhhhHHHHHHHHhcC--CcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 9999999999999998654 3478899999999999999999999999999874
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.4e-43 Score=312.86 Aligned_cols=270 Identities=16% Similarity=0.123 Sum_probs=223.3
Q ss_pred ccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhh
Q 048248 30 RILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILR 109 (316)
Q Consensus 30 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~ 109 (316)
..+..+..|+||||+|+..|+.++|++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.+...
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~----------- 79 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLIETGVS-PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH----------- 79 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-----------
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-----------
Confidence 3456677899999999999999999999999876 4567889999999999999999999999876532
Q ss_pred ccCCCCCcHHHHHHhcCChhHHHHHHhh----CCCcccc-----------cccccCCCCCchHHHHHHHhC--cHHHHHH
Q 048248 110 KRDEEGNTPLHNAVRKCDGKMAFTMIKK----DPEPIRY-----------NNKAKQGPNNLTLLHSAIIKS--QFVVMAK 172 (316)
Q Consensus 110 ~~~~~g~t~L~~a~~~~~~~~~~~ll~~----~~~~~~~-----------~~~~~~~~~~~t~lh~A~~~~--~~~~~~~ 172 (316)
.+.+|.||||+|+..++.++++.|+.. +..+... ......+..|.||||+|+..| +.++++.
T Consensus 80 -~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 80 -SLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKI 158 (364)
T ss_dssp -CCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHH
T ss_pred -cccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHH
Confidence 235799999999999999999999998 4433210 011114557899999999999 9999999
Q ss_pred HHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCC----cccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCC
Q 048248 173 ILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDS----LVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDS 248 (316)
Q Consensus 173 ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~----~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~ 248 (316)
|+..+ .+++.+|..|.||||+|+..|+.++++.|++.+.. +++..|..|+||||+|+..|+.++|++|++.+ .+
T Consensus 159 Ll~~g-a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad 236 (364)
T 3ljn_A 159 LVQLG-ASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG-ID 236 (364)
T ss_dssp HHHHT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CC
T ss_pred HHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CC
Confidence 99886 45899999999999999999999999999986554 26778999999999999999999999999875 45
Q ss_pred ccccccCCCcHHHHHHHcCChhHHHHHhcCccccc---------ccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248 249 IEFIDNKNRNILHLAAQNGHADVVVFILKQPEVED---------LINSSDVDGNTPLHLAAINNHFNIILVLARN 314 (316)
Q Consensus 249 ~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~---------~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 314 (316)
++.+|..|+||||+|+..|+.+++++|++.+.... .....+..++||+++|+..++.+.+..|++.
T Consensus 237 ~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~ 311 (364)
T 3ljn_A 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQE 311 (364)
T ss_dssp TTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHH
Confidence 79999999999999999999999999998754321 1123567899999999999988777777654
No 10
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.9e-42 Score=293.54 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=163.2
Q ss_pred cCCCChHHHHHHHhCCHHHHHHHHhcCC----------CccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcc
Q 048248 35 SQNGDTALHIAARFGHEILVMEILKHQS----------DLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTF 104 (316)
Q Consensus 35 ~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~----------~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~ 104 (316)
...|.|+||+|+..|+...+..++..++ ......+.+|+||||+|+..|+.+++++|++.+..
T Consensus 12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~------- 84 (285)
T 3d9h_A 12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA------- 84 (285)
T ss_dssp ------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-------
T ss_pred chHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-------
Confidence 4567788888888777655555443321 11234566778888888888888888888775433
Q ss_pred hhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccc
Q 048248 105 DDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVR 184 (316)
Q Consensus 105 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~ 184 (316)
++.+|.+|+||||+|+..++.++++.|++.+.++ +..+..|.||||+|+..|+.++++.|+..+.+ ++.
T Consensus 85 ---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~- 153 (285)
T 3d9h_A 85 ---VNIITADHVSPLHEACLGGHLSCVKILLKHGAQV------NGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-VQP- 153 (285)
T ss_dssp ---SCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SSC-
T ss_pred ---CCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCC-CCC-
Confidence 3345677888888888888888888888776543 23455677888888888888888777766543 333
Q ss_pred ccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHH
Q 048248 185 DERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAA 264 (316)
Q Consensus 185 d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 264 (316)
+..|.||||+|+..|+.++++.|+..+. +++.+|..|+||||+|+..|+.+++++|++.+.. ++ .+..|.||||+|+
T Consensus 154 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~ 230 (285)
T 3d9h_A 154 ESDLASPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVV 230 (285)
T ss_dssp SCTTSCHHHHHHHHTCHHHHHHHHHTTC-CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHH
Confidence 3458888888888888888887776554 4556777888888888888888888888876543 45 3777888888888
Q ss_pred HcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248 265 QNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARN 314 (316)
Q Consensus 265 ~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 314 (316)
..|+.+++++|++.+. .++.+|.+|+||||+|+ ++.+++++|+++
T Consensus 231 ~~~~~~~v~~Ll~~ga---d~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 231 RTASEELACLLMDFGA---DTQAKNAEGKRPVELVP--PESPLAQLFLER 275 (285)
T ss_dssp HTTCHHHHHHHHHTTC---CTTCCCTTSCCGGGGSC--TTSHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHhc--CccHHHHHHHHh
Confidence 8888888888887753 35677888888888887 456788888775
No 11
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=289.73 Aligned_cols=253 Identities=13% Similarity=0.142 Sum_probs=215.7
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCC
Q 048248 37 NGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGN 116 (316)
Q Consensus 37 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 116 (316)
+|+||||+|+..|+.++|++|++.+.+ ++..+.+|.||||+|+..|+.+++++|++.+.+ ++..|..|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------~~~~~~~g~ 70 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHVSPLHEACLGGHLSCVKILLKHGAQ----------VNGVTADWH 70 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----------TTCCCTTSC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----------CCCCCCCCC
Confidence 589999999999999999999998876 456788999999999999999999999987544 345688999
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA 196 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 196 (316)
||||+|+..++.++++.|++.+.+.. .+..|.||||+|+..|+.++++.|+..+. +++.+|..|.||||+|+
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~ 142 (261)
T 2xai_A 71 TPLFNACVSGSWDCVNLLLQHGASVQ-------PESDLASPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLAC 142 (261)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCSS-------CSCTTCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCBTTTBCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCC-------CCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCcCCCCCCCHHHHHH
Confidence 99999999999999999999887653 23358899999999999999999998765 58999999999999999
Q ss_pred HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248 197 ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL 276 (316)
Q Consensus 197 ~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll 276 (316)
..|+.++++.|++.+.. ++ .+..|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+.++ +++++|+
T Consensus 143 ~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~~--~~~~~ll 217 (261)
T 2xai_A 143 ENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVARTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPES--PLAQLFL 217 (261)
T ss_dssp HTTCHHHHHHHHHHTCC-TT-CCBTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTTC--THHHHHH
T ss_pred HhCCHHHHHHHHHcCCC-CC-CCCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCChhhhccccc--cHHHHHH
Confidence 99999999999987654 44 4889999999999999999999999875 457999999999999999654 5888888
Q ss_pred cCcccc-----cccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 277 KQPEVE-----DLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 277 ~~~~~~-----~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+.+... ..++.+|..|.||+|+|.+....+.++-++.
T Consensus 218 ~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 218 EREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp HC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred hccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 875422 1245678899999999999988888877765
No 12
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.1e-41 Score=285.80 Aligned_cols=230 Identities=22% Similarity=0.244 Sum_probs=116.0
Q ss_pred ccccccCCCChHHHHHHHhC-------------CHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCC
Q 048248 30 RILGTSQNGDTALHIAARFG-------------HEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHG 96 (316)
Q Consensus 30 ~~~~~~~~g~t~Lh~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~ 96 (316)
+++.++.+|+||||+|+..| +.+++++|+..++......+..|+||||+|+..|+.+++++|+
T Consensus 2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll---- 77 (253)
T 1yyh_A 2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLL---- 77 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH----
T ss_pred CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHH----
Confidence 35667888999999998877 4445555555444433333444555555555555555554444
Q ss_pred CCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHh
Q 048248 97 NGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEA 176 (316)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~ 176 (316)
+.+.++ +..+..|.||||+|+..|+.++++.|+..
T Consensus 78 ---------------------------------------~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 112 (253)
T 1yyh_A 78 ---------------------------------------EASADA------NIQDNMGRTPLHAAVSADAQGVFQILIRN 112 (253)
T ss_dssp ---------------------------------------HTTCCT------TCCCTTSCCHHHHHHHHTCHHHHHHHHHS
T ss_pred ---------------------------------------HcCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 443332 12234455666666666666666666665
Q ss_pred ccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCC
Q 048248 177 KRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKN 256 (316)
Q Consensus 177 ~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g 256 (316)
+...++.++..|.||||+|+..|+.++++.|+..+ .+++.+|..|+||||+|+..|+.+++++|++.+. +++.+|..|
T Consensus 113 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g 190 (253)
T 1yyh_A 113 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA-NKDMQNNRE 190 (253)
T ss_dssp TTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTS
T ss_pred CCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCC
Confidence 54445666666666666666666666666666543 3344566666677777776677777776666543 346666667
Q ss_pred CcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 257 RNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 257 ~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|++.|+.+++++|.+
T Consensus 191 ~tpL~~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~ 244 (253)
T 1yyh_A 191 ETPLFLAAREGSYETAKVLLDHFA---NRDITDHMDRLPRDIAQERMHHDIVRLLDL 244 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHC
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCC---CccccccCCCCHHHHHHHcCCHHHHHHHHH
Confidence 777777777777777777666653 245566667777777777777777766654
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=289.31 Aligned_cols=252 Identities=14% Similarity=0.185 Sum_probs=199.3
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhc----------CCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLN----------GNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSE 73 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~----------~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~ 73 (316)
..+++|.|+..|+.+.+.+++... ...++..+..|+||||+|+..|+.++|++|++.+.+ ++..+.+|+
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-~~~~~~~g~ 93 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-VNIITADHV 93 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-SCEECTTCC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCcCCCCC
Confidence 678999999999999998866543 223556788999999999999999999999998876 456788999
Q ss_pred cHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCC
Q 048248 74 TPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPN 153 (316)
Q Consensus 74 tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~ 153 (316)
||||+|+..|+.+++++|++.+.. ++..|..|+||||+|+..++.++++.|+..+.... .+..
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 156 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQ----------VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-------PESD 156 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC----------SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS-------CSCT
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCC----------CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC-------CCCC
Confidence 999999999999999999987544 34468899999999999999999999999876652 1335
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG 233 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g 233 (316)
|.||||+|+..|+.++++.|+..+. +++.+|..|.||||+|+..|+.++++.|++.+.. ++ .|..|.||||+|+..|
T Consensus 157 g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~~ 233 (285)
T 3d9h_A 157 LASPIHEAARRGHVECVNSLIAYGG-NIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRTA 233 (285)
T ss_dssp TSCHHHHHHHHTCHHHHHHHHHTTC-CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHcC
Confidence 8999999999999999999998765 5899999999999999999999999999987654 44 4889999999999999
Q ss_pred CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 234 QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
+.+++++|++.+ .+++.+|..|+||||+|+ ++.+++++|++..
T Consensus 234 ~~~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~ 276 (285)
T 3d9h_A 234 SEELACLLMDFG-ADTQAKNAEGKRPVELVP--PESPLAQLFLERE 276 (285)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC
T ss_pred CHHHHHHHHHCC-CCCCCcCCCCCCHHHHhc--CccHHHHHHHHhh
Confidence 999999999875 457999999999999999 5679999999873
No 14
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9.5e-42 Score=290.18 Aligned_cols=259 Identities=19% Similarity=0.163 Sum_probs=180.6
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHhcCCC--ccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhh
Q 048248 32 LGTSQNGDTALHIAARFGHEILVMEILKHQSD--LVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILR 109 (316)
Q Consensus 32 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~ 109 (316)
+.++..|+||||+|+..|+.++|++|++.++. .++..+..|+||||+|+..|+.+++++|++.++. +.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----------~~ 72 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG----------VL 72 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------SS
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------CC
Confidence 45678899999999999999999999987665 2456778899999999999999999999987554 23
Q ss_pred ccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccccc-------ccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccc
Q 048248 110 KRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYN-------NKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLIN 182 (316)
Q Consensus 110 ~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~-------~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~ 182 (316)
..|..|+||||+|+..++.++++.|+..++...... ........+.++++.++..+....+..++...+..++
T Consensus 73 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T 1oy3_D 73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152 (282)
T ss_dssp CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT
T ss_pred CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC
Confidence 457889999999999999999999998775532110 0011123456788887776665555555555566688
Q ss_pred ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccC-CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHH
Q 048248 183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHD-CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILH 261 (316)
Q Consensus 183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 261 (316)
.+|..|.||||+|+..|+.++++.|++.+... +..+ ..|+||||+|+..|+.++|++|++.+ .+++.+|..|+||||
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpL~ 230 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLRDAGADL-NKPEPTCGRTPLHLAVEAQAASVLELLLKAG-ADPTARMYGGRTPLG 230 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCcCHHHHHHHcCCHHHHHHHHHcC-CCCcccccCCCCHHH
Confidence 89999999999999999999999999876554 4455 45999999999999999999999885 457999999999999
Q ss_pred HHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCCh
Q 048248 262 LAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHF 305 (316)
Q Consensus 262 ~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~ 305 (316)
+|+..|+.+++++|++.+. .++.+|..|.|||++|......
T Consensus 231 ~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 231 SALLRPNPILARLLRAHGA---PEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp HHHTSSCHHHHHHHHHTTC---CCCCCC----------------
T ss_pred HHHHcCCcHHHHHHHHcCC---CcCcCCCcccccccccCCcccc
Confidence 9999999999999999875 3678999999999999886643
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=2.3e-41 Score=283.88 Aligned_cols=212 Identities=23% Similarity=0.246 Sum_probs=148.9
Q ss_pred cccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccc
Q 048248 65 VSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRY 144 (316)
Q Consensus 65 ~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~ 144 (316)
++.+|.+|+||||+|+..|+...+ ...+...++.++++.|+..++....
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~------------------------------~~~~~~~~~~~~v~~Ll~~g~~~~~- 51 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLET------------------------------GNSEEEEDAPAVISDFIYQGASLHN- 51 (253)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCCcHHHHHHhccccccc------------------------------cchhhcCCChHHHHHHHHccCCccc-
Confidence 345778999999999998742100 0013455667788888887765432
Q ss_pred cccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCc
Q 048248 145 NNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQS 224 (316)
Q Consensus 145 ~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~t 224 (316)
..+..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|+..|+.++++.|+..++.+++.++..|.|
T Consensus 52 ----~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t 126 (253)
T 1yyh_A 52 ----QTDRTGETALHLAARYSRSDAAKRLLEASA-DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT 126 (253)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCC
T ss_pred ----ccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCc
Confidence 235678999999999999999999998764 589999999999999999999999999999888778888999999
Q ss_pred HHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248 225 PLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNH 304 (316)
Q Consensus 225 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 304 (316)
|||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|++.|+
T Consensus 127 ~L~~A~~~~~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~tpL~~A~~~~~ 202 (253)
T 1yyh_A 127 PLILAARLAVEGMLEDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA---NKDMQNNREETPLFLAAREGS 202 (253)
T ss_dssp HHHHHHHHTCSSHHHHHHHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHHcChHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHCCC
Confidence 9999999999999999998754 578999999999999999999999999999864 367889999999999999999
Q ss_pred hhHHHHHhhcCC
Q 048248 305 FNIILVLARNMS 316 (316)
Q Consensus 305 ~~~~~~Ll~~~~ 316 (316)
.+++++|++++.
T Consensus 203 ~~~v~~Ll~~ga 214 (253)
T 1yyh_A 203 YETAKVLLDHFA 214 (253)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHcCC
Confidence 999999999763
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=5.4e-41 Score=294.06 Aligned_cols=263 Identities=21% Similarity=0.231 Sum_probs=223.7
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhcc
Q 048248 32 LGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKR 111 (316)
Q Consensus 32 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 111 (316)
...+..|.|+||.|++.|+.+.|+.|+...+...+..|..|.||||+|+..|+.+++++|++.+.+ ++..
T Consensus 18 ~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------~~~~ 87 (351)
T 3utm_A 18 VLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD----------VHAK 87 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------TTCC
T ss_pred eeeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------CCcc
Confidence 344567899999999999999999999875555667888999999999999999999999987544 3456
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcH
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNP 191 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 191 (316)
|..|+||||+|+..++.++++.|++.+.++ +..+..|.||||+|+..|+.++++.|+..+. .++..+..|.||
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~~~ 160 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACV------NAMDLWQFTPLHEAASKNRVEVCSLLLSHGA-DPTLVNCHGKSA 160 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCH
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCccccCCCCcc
Confidence 889999999999999999999999987664 2346678999999999999999999998764 578899999999
Q ss_pred HHHHH---------------------HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc---CCHhHHHHHHhhCCC
Q 048248 192 LRYAA---------------------ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN---GQLSILENLLHSYPD 247 (316)
Q Consensus 192 Lh~A~---------------------~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~ 247 (316)
+++|+ ..+..+.+..++...... ...+..|.||||+|+.. +..+++++|++.+.
T Consensus 161 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~- 238 (351)
T 3utm_A 161 VDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIIN-FKQPQSHETALHCAVASLHPKRKQVAELLLRKGA- 238 (351)
T ss_dssp HHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTT-CCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTC-
T ss_pred hHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhccc-ccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCC-
Confidence 88754 445555666666555443 34678899999999999 55789999998764
Q ss_pred CccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 248 SIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 248 ~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|++.|+.+++++|+++++
T Consensus 239 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga---~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 239 NVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGA---KMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 478999999999999999999999999998864 478889999999999999999999999999863
No 17
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-41 Score=301.06 Aligned_cols=257 Identities=19% Similarity=0.243 Sum_probs=216.1
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCcccccc-CCCChHHHHHHHhCCHHHHHHHH--------hcCCCccccCCCCCCc
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTS-QNGDTALHIAARFGHEILVMEIL--------KHQSDLVSVPNHKSET 74 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~-~~g~t~Lh~A~~~~~~~~v~~Ll--------~~~~~~~~~~~~~g~t 74 (316)
..++||.|+..| .+.++.++. ..++..+ ..|+||||+|+..|+.++|++|+ +.+.+ ++..|.+|.|
T Consensus 94 g~t~L~~Aa~~~-~~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-vn~~d~~g~T 168 (373)
T 2fo1_E 94 SPIKLHTEAAGS-YAITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-VNAMDCDENT 168 (373)
T ss_dssp CCCHHHHHHHSS-SCCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-TTCCCTTSCC
T ss_pred CccHHHHHhcCC-chHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-CcCCCCCCCC
Confidence 467899999955 466644432 4566677 78999999999999988877776 56665 4667889999
Q ss_pred HHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCC
Q 048248 75 PMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNN 154 (316)
Q Consensus 75 pLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~ 154 (316)
|||+|+..|+.+++++|++.+++. ...+..|.||||+|+..++.++++.|+..+... .+....+..|
T Consensus 169 pL~~A~~~g~~~iv~~Ll~~ga~~----------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~---~~~~~~d~~g 235 (373)
T 2fo1_E 169 PLMLAVLARRRRLVAYLMKAGADP----------TIYNKSERSALHQAAANRDFGMMVYMLNSTKLK---GDIEELDRNG 235 (373)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCS----------CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH---HTTSCCCTTS
T ss_pred HHHHHHHcChHHHHHHHHHCCCCC----------cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc---cChhhcCCCC
Confidence 999999999999999999876543 346889999999999999999999999865210 1223456789
Q ss_pred chHHHHHHHhC---cHHHHHHHHHhccccccc--------cccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCC
Q 048248 155 LTLLHSAIIKS---QFVVMAKILEAKRDLINV--------RDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQ 223 (316)
Q Consensus 155 ~t~lh~A~~~~---~~~~~~~ll~~~~~~~~~--------~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~ 223 (316)
.||||+|+..+ +.++++.|+..+.+ ++. .|..|.||||+|+..|+.++++.|+..++.+++.+|..|+
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~ 314 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAK-VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 314 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCC-SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCC-cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCC
Confidence 99999999988 88999999987653 443 5779999999999999999999999988888889999999
Q ss_pred cHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 224 SPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 224 tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
||||+|+..|+.++|++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 315 TpL~~A~~~g~~~iv~~Ll~~g-ad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 315 TPIMLAAQEGRIEVVMYLIQQG-ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT-CCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CHHHHHHHcCCHHHHHHHHHcC-CCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 9999999999999999999875 4579999999999999999999999999998754
No 18
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=6.3e-40 Score=289.43 Aligned_cols=265 Identities=18% Similarity=0.151 Sum_probs=220.7
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..++||.|+..|+.+.++.|+.. +.+++..+..|+||||+|+..|+.++|++|++.++.. .+.+|.||||+|+..|
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~~g 95 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVMAN 95 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHHcC
Confidence 46799999999999999888866 5778999999999999999999999999999998843 3457999999999999
Q ss_pred ChhHHHHhhcc----CCCCCC------CCc-chhhhhccCCCCCcHHHHHHhcC--ChhHHHHHHhhCCCcccccccccC
Q 048248 84 NFGAAQIFMRP----HGNGNN------TGT-FDDILRKRDEEGNTPLHNAVRKC--DGKMAFTMIKKDPEPIRYNNKAKQ 150 (316)
Q Consensus 84 ~~~~~~~l~~~----~~~~~~------~~~-~~~~~~~~~~~g~t~L~~a~~~~--~~~~~~~ll~~~~~~~~~~~~~~~ 150 (316)
+.+++++|++. +..... ... ........|..|.||||+|+..+ +.++++.|+..+.++ +..
T Consensus 96 ~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~------~~~ 169 (364)
T 3ljn_A 96 KTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP------TAK 169 (364)
T ss_dssp CHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT------TCC
T ss_pred CHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC------ccc
Confidence 99999999986 322110 000 00012226789999999999999 999999999997665 235
Q ss_pred CCCCchHHHHHHHhCcHHHHHHHHHhcccc----ccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHH
Q 048248 151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDL----INVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPL 226 (316)
Q Consensus 151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~----~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpL 226 (316)
+..|.||||+|+..|+.++++.|+..+.+. ++.+|..|+||||+|+..|+.++++.|++.+ .+++.+|..|+|||
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL 248 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMG-IDVNMEDNEHTVPL 248 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTT-CCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHH
Confidence 668999999999999999999999876532 7889999999999999999999999999765 55678999999999
Q ss_pred HHHHhcCCHhHHHHHHhhCCCC-----------ccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 227 HLASQNGQLSILENLLHSYPDS-----------IEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 227 h~A~~~g~~~iv~~Ll~~~~~~-----------~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|+|+..|+.+++++|++.+... ....+..++|||++|+..|+.+.+..|+..+
T Consensus 249 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~ 312 (364)
T 3ljn_A 249 YLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEK 312 (364)
T ss_dssp HHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHH
Confidence 9999999999999999985321 1235778999999999999888888877654
No 19
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=2.7e-39 Score=268.35 Aligned_cols=227 Identities=22% Similarity=0.305 Sum_probs=142.2
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhcc
Q 048248 32 LGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKR 111 (316)
Q Consensus 32 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 111 (316)
+..+.+|.||||+|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.+
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g---------------- 67 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-IDTCSEDQRTPLMEAAENNHLEAVKYLIKAG---------------- 67 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTT----------------
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-cCccCCCCCCHHHHHHHhCCHHHHHHHHhCC----------------
Confidence 34455666666666666666666666665543 5555555666666666666666666665432
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcH
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNP 191 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 191 (316)
... ...+..|.||||+|+..|+.++++.|+..++..++..+..|.||
T Consensus 68 ---------------------------~~~------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~ 114 (237)
T 3b7b_A 68 ---------------------------ALV------DPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP 114 (237)
T ss_dssp ---------------------------CCC------CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred ---------------------------CCC------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCH
Confidence 221 11233455666666666666666666665544566666667777
Q ss_pred HHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH
Q 048248 192 LRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV 271 (316)
Q Consensus 192 Lh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~ 271 (316)
||+|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.++
T Consensus 115 L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLSKGS-DINIRDNEENICLHWAAFSGCVDIAEILLAAKC-DLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCC-CCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHhCCHhH
Confidence 777777777777766665443 344566677777777777777777777776543 356677777777777777777777
Q ss_pred HHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 272 VVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 272 ~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+++|++.+. .++.+|.+|+||||+|+..++...+..|++
T Consensus 193 v~~Ll~~ga---d~~~~d~~g~t~l~~A~~~~~~~~~~~l~~ 231 (237)
T 3b7b_A 193 VVLFLSRDS---DVTLKNKEGETPLQCASLNSQVWSALQMSK 231 (237)
T ss_dssp HHHHHTTTC---CTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred HHHHHHcCC---CCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 777776653 245667777777777777777655555543
No 20
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=274.72 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=213.1
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..+|||.|+..|+.+.++.++.. +.+++..+..|.||||+|+..|+.++|++|++.+++ ++..+.+|+||||+|+..|
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~g~t~L~~A~~~~ 80 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-VNGVTADWHTPLFNACVSG 80 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-CCCCCCCCCCHHHHHHHcC
Confidence 35799999999999999888876 567889999999999999999999999999999876 4567889999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH
Q 048248 84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII 163 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~ 163 (316)
+.+++++|++.+.... .+.+|.||||+|+..++.++++.|+..+.++ +..+..|.||||+|+.
T Consensus 81 ~~~~v~~Ll~~g~~~~-----------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~ 143 (261)
T 2xai_A 81 SWDCVNLLLQHGASVQ-----------PESDLASPIHEAARRGHVECVNSLIAYGGNI------DHKISHLGTPLYLACE 143 (261)
T ss_dssp CHHHHHHHHHTTCCSS-----------CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT------TCCBTTTBCHHHHHHH
T ss_pred CHHHHHHHHHCCCCCC-----------CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC------CcCCCCCCCHHHHHHH
Confidence 9999999998765432 2456999999999999999999999988664 3346678999999999
Q ss_pred hCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHh
Q 048248 164 KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLH 243 (316)
Q Consensus 164 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 243 (316)
.|+.++++.|++.+.+ ++. +..|.||||+|+..|+.++++.|++.+ .+++.+|.+|+||||+|+..+ +++++|++
T Consensus 144 ~~~~~~v~~Ll~~g~~-~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~~~--~~~~~ll~ 218 (261)
T 2xai_A 144 NQQRACVKKLLESGAD-VNQ-GKGQDSPLHAVARTASEELACLLMDFG-ADTQAKNAEGKRPVELVPPES--PLAQLFLE 218 (261)
T ss_dssp TTCHHHHHHHHHHTCC-TTC-CBTTBCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGSCTTC--THHHHHHH
T ss_pred hCCHHHHHHHHHcCCC-CCC-CCCCCChHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCChhhhccccc--cHHHHHHh
Confidence 9999999999987654 564 889999999999999999999999875 456789999999999999655 58898888
Q ss_pred hCCC-------CccccccCCCcHHHHHHHcCChhHHHHHhc
Q 048248 244 SYPD-------SIEFIDNKNRNILHLAAQNGHADVVVFILK 277 (316)
Q Consensus 244 ~~~~-------~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~ 277 (316)
.+.. .+..+|..|.||+|.|......+.++.++.
T Consensus 219 ~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~~l~ 259 (261)
T 2xai_A 219 REGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQFLL 259 (261)
T ss_dssp C-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHHHHT
T ss_pred ccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHHHHh
Confidence 6542 345679999999999999887777765553
No 21
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.8e-40 Score=273.37 Aligned_cols=233 Identities=19% Similarity=0.210 Sum_probs=142.5
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHh---cCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhh
Q 048248 32 LGTSQNGDTALHIAARFGHEILVMEILK---HQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDIL 108 (316)
Q Consensus 32 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~---~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~ 108 (316)
+.+|.+|+||||+|+..|+.+++++|++ ..+..++..+..|+||||+|+..|+.+++++|++.+...
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---------- 72 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP---------- 72 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----------
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc----------
Confidence 3456677777777777777777777775 223334556666777777777777777777777644321
Q ss_pred hccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCC
Q 048248 109 RKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERN 188 (316)
Q Consensus 109 ~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g 188 (316)
...+..|.||||+|+..++.++++.|+..++.. ...++..|..|
T Consensus 73 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~------------------------------------~~~~~~~~~~g 116 (241)
T 1k1a_A 73 MALDRHGQTAAHLACEHRSPTCLRALLDSAAPG------------------------------------TLDLEARNYDG 116 (241)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTT------------------------------------SCCTTCCCTTS
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc------------------------------------cccccccCcCC
Confidence 223444555555555544444444444443210 01345566667
Q ss_pred CcHHHHHHHhCcHHHHHHhhcCCCCcccccC-CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248 189 RNPLRYAAALGHFKIACRLSDEDDSLVYQHD-CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG 267 (316)
Q Consensus 189 ~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 267 (316)
.||||+|+..|+.++++.|++.+... +..+ ..|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 194 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADI-DAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRG 194 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCc-ccccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 77777777777777776666654433 3344 56777777777777777777777664 335677777777777777777
Q ss_pred ChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 268 HADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 268 ~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
+.+++++|++.+. .++.+|..|+||||+|+..|+.++++.|+++.
T Consensus 195 ~~~~v~~Ll~~ga---~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~ 239 (241)
T 1k1a_A 195 LLPLVRTLVRSGA---DSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239 (241)
T ss_dssp CHHHHHHHHHTTC---CTTCCCTTSCCTTTTCSSHHHHHHHTC-----
T ss_pred CHHHHHHHHhcCC---CCCCcCCCCCCHHHHHHhcCcHHHHhhhccCC
Confidence 7777777777653 25566777777777777777777777776654
No 22
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=8.1e-40 Score=271.99 Aligned_cols=226 Identities=20% Similarity=0.207 Sum_probs=147.5
Q ss_pred cccHHHHHHHhcCChHHHHHHHH---hcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHH
Q 048248 3 TVDHKLFRALRHGYTDKVREFAR---LNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVA 79 (316)
Q Consensus 3 ~~~~~l~~a~~~g~~~~~~~ll~---~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A 79 (316)
...+|||.|+..|+.+.++.++. ..+..++..+..|+||||+|+..|+.+++++|++.+... ...+..|+||||+|
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 8 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAHLA 86 (241)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHHHH
Confidence 46789999999999999998887 367788889999999999999999999999999988764 55788999999999
Q ss_pred HHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHH
Q 048248 80 ARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLH 159 (316)
Q Consensus 80 ~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh 159 (316)
+..|+.+++++|++.+..... .+...+..|.||||+|+..++.++++.|+..+.+
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~------~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~------------------- 141 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTL------DLEARNYDGLTALHVAVNTECQETVQLLLERGAD------------------- 141 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSC------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------------------
T ss_pred HHcCCHHHHHHHHHcCCCccc------cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-------------------
Confidence 999999999999986542110 1334455555555555555555555555554433
Q ss_pred HHHHhCcHHHHHHHHHhccccccccc-cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHH
Q 048248 160 SAIIKSQFVVMAKILEAKRDLINVRD-ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSIL 238 (316)
Q Consensus 160 ~A~~~~~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv 238 (316)
++..+ ..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++
T Consensus 142 ---------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v 199 (241)
T 1k1a_A 142 ---------------------IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGRGLLPLV 199 (241)
T ss_dssp ---------------------TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHHTCHHHH
T ss_pred ---------------------cccccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHH
Confidence 33333 44555555555555555555444432 22334455555555555555555555
Q ss_pred HHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhc
Q 048248 239 ENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILK 277 (316)
Q Consensus 239 ~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~ 277 (316)
++|++.+. +++.+|..|+||||+|+..|+.++++.|.+
T Consensus 200 ~~Ll~~ga-~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~ 237 (241)
T 1k1a_A 200 RTLVRSGA-DSSLKNCHNDTPLMVARSRRVIDILRGKAT 237 (241)
T ss_dssp HHHHHTTC-CTTCCCTTSCCTTTTCSSHHHHHHHTC---
T ss_pred HHHHhcCC-CCCCcCCCCCCHHHHHHhcCcHHHHhhhcc
Confidence 55554432 235555555555555555555555555443
No 23
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.3e-39 Score=267.14 Aligned_cols=224 Identities=21% Similarity=0.246 Sum_probs=130.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhc-cCCCCC
Q 048248 38 GDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRK-RDEEGN 116 (316)
Q Consensus 38 g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~g~ 116 (316)
|+||||+|++.|+.++|++|++.++......+.+|+||||+|+..|+.+++++|++.+.... +.. .+..|+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--------~~~~~~~~g~ 73 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN--------LDDYPDDSGW 73 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC--------GGGCCCTTSC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc--------ccccCCCCCC
Confidence 77888888888888888888888776655567778888888888888888888887642211 111 344455
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA 196 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 196 (316)
||||+|+..++.++++.|+..+. ...++.+|..|.||||+|+
T Consensus 74 t~L~~A~~~~~~~~~~~Ll~~g~--------------------------------------~~~~~~~~~~g~t~L~~A~ 115 (228)
T 2dzn_A 74 TPFHIACSVGNLEVVKSLYDRPL--------------------------------------KPDLNKITNQGVTCLHLAV 115 (228)
T ss_dssp CHHHHHHHHCCHHHHHHHHSSSS--------------------------------------CCCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCC--------------------------------------CcccccCCcCCCCHHHHHH
Confidence 55555555444444444444331 1224445555555555555
Q ss_pred HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248 197 ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL 276 (316)
Q Consensus 197 ~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll 276 (316)
..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.++.+++.+|..|+||||+|+..|+.+++++|+
T Consensus 116 ~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 116 GKKWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp HTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 555555555555442 2334455555566666666566666665555554445555555666666666666666666655
Q ss_pred -cCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248 277 -KQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARN 314 (316)
Q Consensus 277 -~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 314 (316)
+.+. .++.+|.+|+||||+|+.. +++++|+++
T Consensus 195 ~~~ga---~~~~~~~~g~t~l~~A~~~---~~~~~l~~~ 227 (228)
T 2dzn_A 195 EKYGA---EYDLVDNKGAKAEDVALNE---QVKKFFLNN 227 (228)
T ss_dssp HHHCC---CSCCBCTTSCBGGGGCSST---THHHHHHTT
T ss_pred HhcCC---CCCccCCCCCcHHHHHHHH---HHHHHHHhc
Confidence 3332 2445555566666665432 455555443
No 24
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1e-38 Score=264.85 Aligned_cols=220 Identities=20% Similarity=0.214 Sum_probs=163.9
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..+|||.|+..|+.+.++.++.. +.+++..+..|+||||+|+..|+.+++++|++.+... ...+..|.||||+|+..|
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 88 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAKKG 88 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHHTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 56899999999999999877765 5678888999999999999999999999999988764 557788999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH
Q 048248 84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII 163 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~ 163 (316)
+.+++++|++.+... +...+. .|.||||+|+.
T Consensus 89 ~~~~~~~Ll~~~~~~---------~~~~~~---------------------------------------~g~t~L~~A~~ 120 (237)
T 3b7b_A 89 HYEVVQYLLSNGQMD---------VNCQDD---------------------------------------GGWTPMIWATE 120 (237)
T ss_dssp CHHHHHHHHTTTCCC---------TTCCCT---------------------------------------TSCCHHHHHHH
T ss_pred CHHHHHHHHhCCCCC---------cccCCC---------------------------------------CCCCHHHHHHH
Confidence 999999998753211 122233 34555555555
Q ss_pred hCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHh
Q 048248 164 KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLH 243 (316)
Q Consensus 164 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 243 (316)
.++.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++
T Consensus 121 ~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 198 (237)
T 3b7b_A 121 YKHVDLVKLLLSKGS-DINIRDNEENICLHWAAFSGCVDIAEILLAAKC-DLHAVNIHGDSPLHIAARENRYDCVVLFLS 198 (237)
T ss_dssp TTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHT
T ss_pred cCCHHHHHHHHHCCC-CCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHhCCHhHHHHHHH
Confidence 666666666665443 356667777777777777777777777775543 345567777788888888888888887776
Q ss_pred hCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248 244 SYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL 276 (316)
Q Consensus 244 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll 276 (316)
.+. +++.+|..|+||||+|+..|+.+.+..++
T Consensus 199 ~ga-d~~~~d~~g~t~l~~A~~~~~~~~~~~l~ 230 (237)
T 3b7b_A 199 RDS-DVTLKNKEGETPLQCASLNSQVWSALQMS 230 (237)
T ss_dssp TTC-CTTCCCTTSCCHHHHSCTTCHHHHHHHHH
T ss_pred cCC-CCCccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 644 35777777888888888777776555554
No 25
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.2e-38 Score=263.30 Aligned_cols=224 Identities=20% Similarity=0.233 Sum_probs=135.7
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCC
Q 048248 37 NGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGN 116 (316)
Q Consensus 37 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 116 (316)
.+.||||.|+..|+.+++++|+..++......+.+|.||||+|+..|+.+++++|++.+.. +...|.
T Consensus 5 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------~~~~~~--- 71 (231)
T 3aji_A 5 VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP----------VNDKDD--- 71 (231)
T ss_dssp CSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----------SCCCCT---
T ss_pred cccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC----------CCCcCC---
Confidence 3556666666666666666666655544444555666666666666666666666654322 111233
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA 196 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 196 (316)
.|.||||+|+..|+.++++.|+..+. .++.+|..|.||||+|+
T Consensus 72 ------------------------------------~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~ 114 (231)
T 3aji_A 72 ------------------------------------AGWSPLHIAASAGXDEIVKALLVKGA-HVNAVNQNGCTPLHYAA 114 (231)
T ss_dssp ------------------------------------TSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHH
T ss_pred ------------------------------------CCCCHHHHHHHcCHHHHHHHHHHcCC-CCCCCCCCCCCHHHHHH
Confidence 44455555555555555555554432 34555666666666666
Q ss_pred HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248 197 ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL 276 (316)
Q Consensus 197 ~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll 276 (316)
..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|+
T Consensus 115 ~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 192 (231)
T 3aji_A 115 SKNRHEIAVMLLEGGA-NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKA-STNIQDTEGNTPLHLACDEERVEEAKFLV 192 (231)
T ss_dssp HTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CccccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 6666666666665433 334556667777777777777777777766543 35666667777777777777777777777
Q ss_pred cCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 277 KQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 277 ~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
+.+. .++.+|..|+||||+|+..++.+++++|.+.+
T Consensus 193 ~~ga---~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~ 228 (231)
T 3aji_A 193 TQGA---SIYIENKEEKTPLQVAKGGLGLILKRLAEGEE 228 (231)
T ss_dssp HTTC---CSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHH
T ss_pred HCCC---CCCCCCCCCCCHHHHHHhhHHHHHHHHHcccc
Confidence 6643 24556667777777777777777777776543
No 26
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-39 Score=278.77 Aligned_cols=274 Identities=16% Similarity=0.185 Sum_probs=222.3
Q ss_pred HHHhcCChHHHHHHHHhcCCc--------cccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHH
Q 048248 10 RALRHGYTDKVREFARLNGNR--------ILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAAR 81 (316)
Q Consensus 10 ~a~~~g~~~~~~~ll~~~~~~--------~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~ 81 (316)
.+++.|..+.++.|+...... ....+..|.||||.||..|+.++|++|++.+.+. +..+.+|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 467888889998988764321 1123456889999999999999999999998774 5678899999999999
Q ss_pred hCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHH
Q 048248 82 AGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSA 161 (316)
Q Consensus 82 ~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A 161 (316)
.|+.+++++|++.+.+ ++..|..|+||||+|+..++.++++.|+..+.++ ...+..|.||||+|
T Consensus 83 ~g~~~~v~~Ll~~ga~----------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~l~~A 146 (299)
T 1s70_B 83 DDNVDMVKFLVENGAN----------INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV------GAVNSEGDTPLDIA 146 (299)
T ss_dssp TTCHHHHHHHHHTTCC----------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHC
T ss_pred cCCHHHHHHHHHCCCC----------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC------CCcCCCCCCHHHHH
Confidence 9999999999987544 3446889999999999999999999999987664 23466889999999
Q ss_pred HHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHH
Q 048248 162 IIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENL 241 (316)
Q Consensus 162 ~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~L 241 (316)
+..++.++++.++...+..++..+..+.++++.. +..++..+.......+..|.||||+|+..|+.+++++|
T Consensus 147 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 218 (299)
T 1s70_B 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRD--------ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218 (299)
T ss_dssp CSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH--------HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred HhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHH--------HHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH
Confidence 9999999999999877665665555454444433 44555556555566788999999999999999999999
Q ss_pred HhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 242 LHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 242 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+.. ..++++.|++
T Consensus 219 l~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga---d~~~~d~~g~t~l~~A~~~-~~~~l~~l~~ 285 (299)
T 1s70_B 219 IQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC---DMEAVNKVGQTAFDVADED-ILGYLEELQK 285 (299)
T ss_dssp HTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCTTTSCCSG-GGHHHHHHHH
T ss_pred HHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHH-HHHHHHHHHH
Confidence 9875 4579999999999999999999999999999864 3678899999999999764 3455555544
No 27
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=275.61 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=159.1
Q ss_pred cccCCCChHHHHHHHhCCHHHHHHHHhcCCCc-------cccCCCCCCcHHHHHHHhCChh-HHHHhhccCCCCCCCCcc
Q 048248 33 GTSQNGDTALHIAARFGHEILVMEILKHQSDL-------VSVPNHKSETPMHVAARAGNFG-AAQIFMRPHGNGNNTGTF 104 (316)
Q Consensus 33 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~-------~~~~~~~g~tpLh~A~~~g~~~-~~~~l~~~~~~~~~~~~~ 104 (316)
.+|..+.|||+.|+..|+.++|++|++.+... ....+..|.||||.|+..+... ++++|+..+.+
T Consensus 6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad------- 78 (269)
T 4b93_B 6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG------- 78 (269)
T ss_dssp -CCCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC-------
T ss_pred ccCccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-------
Confidence 34566789999999999999999999876542 3345667899999999887754 67788876544
Q ss_pred hhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhcccccccc
Q 048248 105 DDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVR 184 (316)
Q Consensus 105 ~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~ 184 (316)
++..|.+|+||||+|+..|+.+++++|+..++++ ...+..|.||+|+|+..++.++++.|+..+. +++.+
T Consensus 79 ---vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~------~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~-~~n~~ 148 (269)
T 4b93_B 79 ---VNVTSQDGSSPLHVAALHGRADLIPLLLKHGANA------GARNADQAVPLHLACQQGHFQVVKCLLDSNA-KPNKK 148 (269)
T ss_dssp ---TTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCT------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCC
T ss_pred ---CCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCc------CccCCCCCCccccccccChHHHHHHHHHCCC-CCCCC
Confidence 3456889999999999999999999999987664 2346678999999999999999999887764 58999
Q ss_pred ccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHH
Q 048248 185 DERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAA 264 (316)
Q Consensus 185 d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 264 (316)
|..|+||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.++|++|++.+ ++++.+|..|+||||+|+
T Consensus 149 d~~g~TpL~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 149 DLSGNTPLIYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHG-ASVQVLNKRQRTAVDCAE 226 (269)
T ss_dssp CTTCCCHHHHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT-CCSCCCCTTSCCSGGGSC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHH
Confidence 999999999999999999999999765 456778999999999999999999999999875 457999999999999998
Q ss_pred HcCC
Q 048248 265 QNGH 268 (316)
Q Consensus 265 ~~g~ 268 (316)
++|+
T Consensus 227 ~~~~ 230 (269)
T 4b93_B 227 QNSK 230 (269)
T ss_dssp TTCH
T ss_pred hCCc
Confidence 8775
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.4e-38 Score=261.53 Aligned_cols=193 Identities=24% Similarity=0.230 Sum_probs=167.6
Q ss_pred CCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHH
Q 048248 113 EEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPL 192 (316)
Q Consensus 113 ~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 192 (316)
..+.+|||.|+..|+.+.++.++..++... ...+..|.||||+|+..|+.++++.|++.+. .++.+|..|.|||
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L 77 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLA-----TRTDQDSRTALHWACSAGHTEIVEFLLQLGV-PVNDKDDAGWSPL 77 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGG-----GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTSCCHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhh-----hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCC-CCCCcCCCCCCHH
Confidence 456788888888888888888887765432 2346678999999999999999999998764 5888999999999
Q ss_pred HHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHH
Q 048248 193 RYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVV 272 (316)
Q Consensus 193 h~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~ 272 (316)
|+|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++.+. .++.++..|.||||+|+..|+.+++
T Consensus 78 ~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v 155 (231)
T 3aji_A 78 HIAASAGXDEIVKALLVKGA-HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA-NPDAKDHYDATAMHRAAAKGNLKMV 155 (231)
T ss_dssp HHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHH
T ss_pred HHHHHcCHHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCCHHHH
Confidence 99999999999999998755 456789999999999999999999999998764 4688999999999999999999999
Q ss_pred HHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 273 VFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 273 ~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
++|++.+. .++.+|..|+||||+|++.++.+++++|++++.
T Consensus 156 ~~Ll~~g~---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 196 (231)
T 3aji_A 156 HILLFYKA---STNIQDTEGNTPLHLACDEERVEEAKFLVTQGA 196 (231)
T ss_dssp HHHHHTTC---CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHhcCC---CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Confidence 99998764 467889999999999999999999999999763
No 29
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=274.14 Aligned_cols=223 Identities=19% Similarity=0.226 Sum_probs=164.3
Q ss_pred CCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCCh-hHHHHHHhhCCCcccccc
Q 048248 68 PNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDG-KMAFTMIKKDPEPIRYNN 146 (316)
Q Consensus 68 ~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~-~~~~~ll~~~~~~~~~~~ 146 (316)
.|..+.+||+.|+..|+.+++++|++.+...... ....+...+..|.||||.|+..+.. .++..|+..+.++
T Consensus 7 kd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~--~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv----- 79 (269)
T 4b93_B 7 KDYREVEKLLRAVADGDLEMVRYLLEWTEEDLED--AEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV----- 79 (269)
T ss_dssp CCCHHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------CCCCT-----
T ss_pred cCccchhHHHHHHHcCCHHHHHHHHHCCCccccc--ccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-----
Confidence 4667889999999999999999999876543211 1223556788999999999987765 4677888877654
Q ss_pred cccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHH
Q 048248 147 KAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPL 226 (316)
Q Consensus 147 ~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpL 226 (316)
+..+.+|.||||+|+..|+.+++++|+..+. +++.++..|.||+|+|+..++.++++.|++.+. +++.+|..|+|||
T Consensus 80 -n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a-~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~-~~n~~d~~g~TpL 156 (269)
T 4b93_B 80 -NVTSQDGSSPLHVAALHGRADLIPLLLKHGA-NAGARNADQAVPLHLACQQGHFQVVKCLLDSNA-KPNKKDLSGNTPL 156 (269)
T ss_dssp -TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTCCCHH
T ss_pred -CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCC-CcCccCCCCCCccccccccChHHHHHHHHHCCC-CCCCCCCCCCCHH
Confidence 3456789999999999999999999998765 578999999999999999999999999987654 5677899999999
Q ss_pred HHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248 227 HLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNH 304 (316)
Q Consensus 227 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 304 (316)
|+|+..|+.++|++|++.+ .+++.++..|+||||+|+..|+.+++++|++.+. .++.+|.+|+||||+|+++++
T Consensus 157 ~~A~~~g~~~~v~~Ll~~g-advn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Ga---d~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 157 IYACSGGHHELVALLLQHG-ASINASNNKGNTALHEAVIEKHVFVVELLLLHGA---SVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHTTCGGGHHHHHHTT-CCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC---CSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHCCCHHHHHHHHHCC-CCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHhCCc
Confidence 9999999999999999875 4579999999999999999999999999999864 478899999999999988775
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-37 Score=264.77 Aligned_cols=256 Identities=15% Similarity=0.104 Sum_probs=177.2
Q ss_pred cccHHHHHHHhcCChHHHHHHHHhcCC--ccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHH
Q 048248 3 TVDHKLFRALRHGYTDKVREFARLNGN--RILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAA 80 (316)
Q Consensus 3 ~~~~~l~~a~~~g~~~~~~~ll~~~~~--~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~ 80 (316)
...+|||.|++.|+.+.++.|+..+.. .++..+..|+||||+|+..|+.++|++|++.+++. +..+..|+||||+|+
T Consensus 8 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~ 86 (282)
T 1oy3_D 8 DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLAC 86 (282)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 457899999999999999988876543 37788899999999999999999999999998874 567889999999999
Q ss_pred HhCChhHHHHhhccCCCCCCCCc---chhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchH
Q 048248 81 RAGNFGAAQIFMRPHGNGNNTGT---FDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTL 157 (316)
Q Consensus 81 ~~g~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~ 157 (316)
..|+.+++++|+..+........ ...........+.++++.+...........++.. ...+.+..+..|.||
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 87 RVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDED-----WRLQLEAENYDGHTP 161 (282)
T ss_dssp TTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCC-----GGGGTTCCCTTSCCH
T ss_pred HcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhh-----hhhcCCCcCCCCcCH
Confidence 99999999999987654321110 0001112234566777776655443332222211 112234567789999
Q ss_pred HHHHHHhCcHHHHHHHHHhcccccccccc-CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHh
Q 048248 158 LHSAIIKSQFVVMAKILEAKRDLINVRDE-RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLS 236 (316)
Q Consensus 158 lh~A~~~~~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 236 (316)
||+|+..|+.++++.|+..+. .++.++. .|+||||+|+..|+.++++.|++. +.+++.+|..|+||||+|+..|+.+
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~ 239 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGA-DLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLRPNPI 239 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTSSCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHcCCcH
Confidence 999999999999999998775 4777775 499999999999999999999987 4566789999999999999999999
Q ss_pred HHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248 237 ILENLLHSYPDSIEFIDNKNRNILHLAAQNG 267 (316)
Q Consensus 237 iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 267 (316)
++++|++.+. +++.+|..|.|||++|....
T Consensus 240 ~v~~Ll~~ga-~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 240 LARLLRAHGA-PEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp HHHHHHHTTC-CCCCCC--------------
T ss_pred HHHHHHHcCC-CcCcCCCcccccccccCCcc
Confidence 9999998765 47999999999999998764
No 31
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.6e-37 Score=254.78 Aligned_cols=222 Identities=26% Similarity=0.319 Sum_probs=153.2
Q ss_pred cHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcC--CCccccCCCCCCcHHHHHHHh
Q 048248 5 DHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQ--SDLVSVPNHKSETPMHVAARA 82 (316)
Q Consensus 5 ~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~g~tpLh~A~~~ 82 (316)
.+|||.|+..|+.+.++.++..+....+..+..|+||||+|+..|+.+++++|++.+ .+.....+..|+||||+|+..
T Consensus 3 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~ 82 (228)
T 2dzn_A 3 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSV 82 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHH
T ss_pred ccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHc
Confidence 569999999999999999998877666668999999999999999999999999998 444333678899999999999
Q ss_pred CChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHH
Q 048248 83 GNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAI 162 (316)
Q Consensus 83 g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~ 162 (316)
|+.+++++|++.+... .+...+..|.||||+|+..
T Consensus 83 ~~~~~~~~Ll~~g~~~--------~~~~~~~~g~t~L~~A~~~------------------------------------- 117 (228)
T 2dzn_A 83 GNLEVVKSLYDRPLKP--------DLNKITNQGVTCLHLAVGK------------------------------------- 117 (228)
T ss_dssp CCHHHHHHHHSSSSCC--------CTTCCCTTCCCHHHHHHHT-------------------------------------
T ss_pred CCHHHHHHHHhCCCCc--------ccccCCcCCCCHHHHHHHc-------------------------------------
Confidence 9999999999864211 1223344555555555544
Q ss_pred HhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHH
Q 048248 163 IKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLL 242 (316)
Q Consensus 163 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 242 (316)
|+.++++.|++.+ .+++.+|..|.||||+|+..|+.++++.|++.+..+++.+|..|+||||+|+..|+.+++++|+
T Consensus 118 --~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 194 (228)
T 2dzn_A 118 --KWFEVSQFLIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLV 194 (228)
T ss_dssp --TCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred --CCHhHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 4555555555443 2345556666666666666666666666665554555556666666666666666666666666
Q ss_pred hhCCCCccccccCCCcHHHHHHHcCChhHHHHHhc
Q 048248 243 HSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILK 277 (316)
Q Consensus 243 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~ 277 (316)
+..+.+++.+|..|+||||+|+.. +++++|++
T Consensus 195 ~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~ 226 (228)
T 2dzn_A 195 EKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226 (228)
T ss_dssp HHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred HhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence 333344566666666666666443 44444443
No 32
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=252.53 Aligned_cols=229 Identities=18% Similarity=0.212 Sum_probs=140.4
Q ss_pred ccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhcc
Q 048248 32 LGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKR 111 (316)
Q Consensus 32 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 111 (316)
+..+..|.||||.|+..|+.+++++|++.+.+. ...+..|.||||+|+..|+.+++++|++.+.... ...
T Consensus 3 ~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---------~~~ 72 (240)
T 3eu9_A 3 THIDDYSTWDIVKATQYGIYERCRELVEAGYDV-RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVD---------QLG 72 (240)
T ss_dssp CCCSCGGGCCHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---------CCB
T ss_pred cccccccchHHHHHHHcCChHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcch---------hhc
Confidence 445667888888888888888888888877653 4566778888888888888888888887654322 112
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcH
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNP 191 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 191 (316)
+..|.||||+|+..++.++++.|++.+..+ ...+..|.||||+|+..|+.++++.|+..+. .++.+|..|.||
T Consensus 73 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~ 145 (240)
T 3eu9_A 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADP------SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ-DVDMMDQNGMTP 145 (240)
T ss_dssp TTTTBCHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCH
T ss_pred CCcCCChhHHHHHcCCHHHHHHHHHcCCCC------cccCCCCCCHHHHHHHcCHHHHHHHHHhcCC-CccccCCCCCcH
Confidence 344666666666666666666666654433 1233455566666666666666666655443 355556666666
Q ss_pred HHHHHHhCc-HHHHHHhhcCCCCcccccCC-CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCCh
Q 048248 192 LRYAAALGH-FKIACRLSDEDDSLVYQHDC-NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA 269 (316)
Q Consensus 192 Lh~A~~~g~-~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 269 (316)
||+|+..++ .++++.|+..+.. ++..+. .|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.
T Consensus 146 l~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 146 LMWAAYRTHSVDPTRLLLTFNVS-VNLGDKYHKNTALHWAVLAGNTTVISLLLEAG-ANVDAQNIKGESALDLAKQRKNV 223 (240)
T ss_dssp HHHHHHHCCSSTTHHHHHHTTCC-TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCBCTTSCBHHHHHHHTTCH
T ss_pred HHHHHHhCChHHHHHHHHhcCCC-cchhhccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCcH
Confidence 666665444 3444444433332 333333 5566666666666666666666554 23455556666666666666666
Q ss_pred hHHHHHhcCc
Q 048248 270 DVVVFILKQP 279 (316)
Q Consensus 270 ~~~~~Ll~~~ 279 (316)
+++++|++.+
T Consensus 224 ~~v~~L~~~~ 233 (240)
T 3eu9_A 224 WMINHLQEAR 233 (240)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 6666666543
No 33
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-36 Score=250.37 Aligned_cols=214 Identities=21% Similarity=0.210 Sum_probs=185.9
Q ss_pred CChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHH
Q 048248 83 GNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAI 162 (316)
Q Consensus 83 g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~ 162 (316)
|+.+++++|++.+.... ...|.+|+||||+|+..++.++++.|++.+.++ ...+..|.||||+|+
T Consensus 2 g~~~~i~~Ll~~g~~~~---------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~ 66 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLH---------NQTDRTGETALHLAARYSRSDAAKRLLEASADA------NIQDNMGRTPLHAAV 66 (223)
T ss_dssp ---CCEETTEETTCCTT---------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHHHcCCCcc---------cccCCCCCchHHHHHHcCCHHHHHHHHHcCCCC------CCcCCCCCCHHHHHH
Confidence 56677788887654422 234789999999999999999999999987654 235668899999999
Q ss_pred HhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHH
Q 048248 163 IKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLL 242 (316)
Q Consensus 163 ~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 242 (316)
..|+.++++.|+..++..++..+..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|+..|+.+++++|+
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLL 145 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC-CCcCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 99999999999998876789999999999999999999999999998654 46678999999999999999999999999
Q ss_pred hhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 243 HSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 243 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
+.+ .+++.+|..|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|++.++.+++++|++.+.
T Consensus 146 ~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 146 KNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFA---NRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC---CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC---CCccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 885 4578999999999999999999999999999875 367789999999999999999999999998763
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=250.97 Aligned_cols=227 Identities=21% Similarity=0.221 Sum_probs=197.1
Q ss_pred CCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccccccc
Q 048248 68 PNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNK 147 (316)
Q Consensus 68 ~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 147 (316)
.|..|.||||.|+..|+.+++++|++.+.. +...+..|.||||+|+..++.++++.|++.++....
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~----------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---- 70 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD----------VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQ---- 70 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC----------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC----------cCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchh----
Confidence 456799999999999999999999987543 344678999999999999999999999998876532
Q ss_pred ccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHH
Q 048248 148 AKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLH 227 (316)
Q Consensus 148 ~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh 227 (316)
..+..|.||||+|+..|+.++++.|++.+. .++.+|..|.||||+|+..|+.++++.|++.+. +++.++..|.||||
T Consensus 71 -~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 71 -LGGDLNSTPLHWATRQGHLSMVVQLMKYGA-DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQ-DVDMMDQNGMTPLM 147 (240)
T ss_dssp -CBTTTTBCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred -hcCCcCCChhHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCC-CccccCCCCCcHHH
Confidence 223458899999999999999999997754 578899999999999999999999999998755 45678999999999
Q ss_pred HHHhcCC-HhHHHHHHhhCCCCcccccc-CCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCCh
Q 048248 228 LASQNGQ-LSILENLLHSYPDSIEFIDN-KNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHF 305 (316)
Q Consensus 228 ~A~~~g~-~~iv~~Ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~ 305 (316)
+|+..++ .+++++|++.+. .++..+. .|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|++.++.
T Consensus 148 ~a~~~~~~~~~~~~L~~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~ 223 (240)
T 3eu9_A 148 WAAYRTHSVDPTRLLLTFNV-SVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGA---NVDAQNIKGESALDLAKQRKNV 223 (240)
T ss_dssp HHHHHCCSSTTHHHHHHTTC-CTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTC---CTTCBCTTSCBHHHHHHHTTCH
T ss_pred HHHHhCChHHHHHHHHhcCC-CcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCcH
Confidence 9997766 788898887654 4677776 89999999999999999999998863 3678899999999999999999
Q ss_pred hHHHHHhhcC
Q 048248 306 NIILVLARNM 315 (316)
Q Consensus 306 ~~~~~Ll~~~ 315 (316)
+++++|++.+
T Consensus 224 ~~v~~L~~~~ 233 (240)
T 3eu9_A 224 WMINHLQEAR 233 (240)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhh
Confidence 9999999876
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=5.8e-37 Score=261.50 Aligned_cols=237 Identities=17% Similarity=0.136 Sum_probs=188.2
Q ss_pred HHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHH
Q 048248 11 ALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQI 90 (316)
Q Consensus 11 a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~ 90 (316)
++...+...+++++... .++..+..|+||||+|+..|+.++|++|++.+++... . +|+||||+|+..|+.+++++
T Consensus 6 ~i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~-~--~g~t~L~~A~~~g~~~~v~~ 80 (285)
T 3kea_A 6 RINTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL-L--ENEFPLHQAATLEDTKIVKI 80 (285)
T ss_dssp TGGGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSC-C--TTCCHHHHHTTSSSCHHHHH
T ss_pred HHHhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-C--CCCCHHHHHHHcCCHHHHHH
Confidence 45677888888888765 4788899999999999999999999999998876432 3 59999999999999999999
Q ss_pred hhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCC-chHHHHHHHhCcHHH
Q 048248 91 FMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNN-LTLLHSAIIKSQFVV 169 (316)
Q Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~-~t~lh~A~~~~~~~~ 169 (316)
|++.+.+ ++..|..|+||||+|+..++.++++.|+..++++. ..+..| .||||+|+..|+.++
T Consensus 81 Ll~~ga~----------~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~------~~~~~g~~t~L~~A~~~~~~~~ 144 (285)
T 3kea_A 81 LLFSGLD----------DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLM------FYGKTGWKTSFYHAVMLNDVSI 144 (285)
T ss_dssp HHHTTCC----------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGG------GCSSSGGGSHHHHHHHTTCHHH
T ss_pred HHHCCCC----------CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCC------ccCCCCCCCHHHHHHHcCCHHH
Confidence 9987544 33457888999999999999999999888876542 345566 689999998888888
Q ss_pred HHHHHHhcccccccccc-CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcH-HHHHHhcCCHhHHHHHHhhCCC
Q 048248 170 MAKILEAKRDLINVRDE-RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSP-LHLASQNGQLSILENLLHSYPD 247 (316)
Q Consensus 170 ~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tp-Lh~A~~~g~~~iv~~Ll~~~~~ 247 (316)
++.|+..+... .+. .|.||||+|+..|+.++++.|++.+ .+++.+|..|+|| ||+|+..|+.+++++|++.+.
T Consensus 145 v~~Ll~~g~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~ga- 219 (285)
T 3kea_A 145 VSYFLSEIPST---FDLAILLSCIHITIKNGHVDMMILLLDYM-TSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDI- 219 (285)
T ss_dssp HHHHHTTSCTT---CCCSTHHHHHHHHHHTTCHHHHHHHHHHH-HHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCB-
T ss_pred HHHHHhCCCcc---ccccCCccHHHHHHHcChHHHHHHHHHcC-CCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCC-
Confidence 88888776532 233 7888999999888888888888764 4566788888887 889988888899988887754
Q ss_pred CccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 248 SIEFIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 248 ~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
+++..| +.|+..|+.+++++|++.+.
T Consensus 220 d~~~~~-------~~a~~~~~~~iv~~Ll~~g~ 245 (285)
T 3kea_A 220 NIYSAN-------LENVLLDDAEIAKMIIEKHV 245 (285)
T ss_dssp CSTTTT-------GGGGTTTCHHHHHHHHHHHH
T ss_pred CCCCCC-------hhhhhcCCHHHHHHHHHcCC
Confidence 356665 35567888888888888763
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.3e-37 Score=263.96 Aligned_cols=233 Identities=14% Similarity=0.088 Sum_probs=195.0
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCCh
Q 048248 49 GHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDG 128 (316)
Q Consensus 49 ~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~ 128 (316)
.....+..+|..+. ++..|.+|+||||+|+..|+.+++++|++.+.+.+ . .+|+||||+|+..++.
T Consensus 10 ~~~~~v~~lL~~~~--~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~----------~--~~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 10 WKSKQLKSFLSSKD--TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN----------L--LENEFPLHQAATLEDT 75 (285)
T ss_dssp CCHHHHHHHHHSTT--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGS----------C--CTTCCHHHHHTTSSSC
T ss_pred cCHHHHHHHHHhCC--CCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC----------C--CCCCCHHHHHHHcCCH
Confidence 34444444554442 45678899999999999999999999998754422 2 2599999999999999
Q ss_pred hHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCC-CcHHHHHHHhCcHHHHHHh
Q 048248 129 KMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERN-RNPLRYAAALGHFKIACRL 207 (316)
Q Consensus 129 ~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g-~tpLh~A~~~g~~~~~~~l 207 (316)
++++.|++.++++ +..+..|.||||+|+..|+.++++.|+..+. +++.+|..| .||||+|+..|+.++++.|
T Consensus 76 ~~v~~Ll~~ga~~------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~g~~t~L~~A~~~~~~~~v~~L 148 (285)
T 3kea_A 76 KIVKILLFSGLDD------SQFDDKGNTALYYAVDSGNMQTVKLFVKKNW-RLMFYGKTGWKTSFYHAVMLNDVSIVSYF 148 (285)
T ss_dssp HHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCG-GGGGCSSSGGGSHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHCCCCC------CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 9999999988764 2356689999999999999999999998854 589999999 8999999999999999999
Q ss_pred hcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcH-HHHHHHcCChhHHHHHhcCcccccccc
Q 048248 208 SDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNI-LHLAAQNGHADVVVFILKQPEVEDLIN 286 (316)
Q Consensus 208 l~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp-Lh~A~~~g~~~~~~~Ll~~~~~~~~~~ 286 (316)
+..+..... ...|+||||+|+..|+.+++++|++.+. +++.+|..|+|| ||+|+..|+.+++++|++.+.. ++
T Consensus 149 l~~g~~~~~--~~~g~t~L~~A~~~g~~~~v~~Ll~~ga-d~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad---~~ 222 (285)
T 3kea_A 149 LSEIPSTFD--LAILLSCIHITIKNGHVDMMILLLDYMT-STNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN---IY 222 (285)
T ss_dssp HTTSCTTCC--CSTHHHHHHHHHHTTCHHHHHHHHHHHH-HTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBC---ST
T ss_pred HhCCCcccc--ccCCccHHHHHHHcChHHHHHHHHHcCC-CCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCC---CC
Confidence 988765421 2389999999999999999999998854 478999999998 9999999999999999998653 45
Q ss_pred cCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 287 SSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 287 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
..| +.|+..|+.+++++|++++
T Consensus 223 ~~~-------~~a~~~~~~~iv~~Ll~~g 244 (285)
T 3kea_A 223 SAN-------LENVLLDDAEIAKMIIEKH 244 (285)
T ss_dssp TTT-------GGGGTTTCHHHHHHHHHHH
T ss_pred CCC-------hhhhhcCCHHHHHHHHHcC
Confidence 554 3668899999999999875
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.5e-36 Score=249.41 Aligned_cols=214 Identities=20% Similarity=0.270 Sum_probs=149.2
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCCh
Q 048248 49 GHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDG 128 (316)
Q Consensus 49 ~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~ 128 (316)
|+.+++++|++.+.......|.+|+||||+|+..|+.+++++|++.+.. +...|..|+||||+|+..++.
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----------~~~~~~~g~t~L~~A~~~~~~ 71 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD----------ANIQDNMGRTPLHAAVSADAQ 71 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------TTCCCTTSCCHHHHHHHTTCH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC----------CCCcCCCCCCHHHHHHHcCCH
Confidence 3445555555555554444455566666666666666666666654322 222455566666666666666
Q ss_pred hHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhh
Q 048248 129 KMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLS 208 (316)
Q Consensus 129 ~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll 208 (316)
++++.|+..++... ...+..|.||||+|+..++.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|+
T Consensus 72 ~~v~~Ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 145 (223)
T 2f8y_A 72 GVFQILIRNRATDL-----DARMHDGTTPLILAARLAVEGMLEDLINSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLL 145 (223)
T ss_dssp HHHHHHHHBTTSCT-----TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCCCc-----ccCCCCCCcHHHHHHHhCcHHHHHHHHHcCC-CCcCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 66666666544221 2234467788888888888888888877554 47788888899999999888888888888
Q ss_pred cCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 209 DEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 209 ~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
+.+ .+++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|++.+.
T Consensus 146 ~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 146 KNG-ANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HcC-CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 774 4556778889999999999999999998888754 468888889999999999999999999998764
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=1.8e-35 Score=239.15 Aligned_cols=194 Identities=18% Similarity=0.221 Sum_probs=176.3
Q ss_pred CCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHH
Q 048248 113 EEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPL 192 (316)
Q Consensus 113 ~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 192 (316)
..+.||||.|+..++.+.++.++..++... +..+..|.||||+|+..|+.++++.|++.+. +++.+|..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l 76 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQV-----DEVDTEGNTPLNIAVHNNDIEIAKALIDRGA-DINLQNSISDSPY 76 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCT-----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCC-----CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHH
Confidence 568899999999999999999998765332 3456689999999999999999999998764 5899999999999
Q ss_pred HHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCC----
Q 048248 193 RYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGH---- 268 (316)
Q Consensus 193 h~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~---- 268 (316)
|+|+..|+.++++.|++..+.+++..|..|.||||+|+..|+.+++++|++.++.+++.+|..|+||||+|+..++
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~ 156 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL 156 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH
T ss_pred HHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh
Confidence 9999999999999999888888888999999999999999999999999999877789999999999999999998
Q ss_pred -hhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 269 -ADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 269 -~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
.+++++|++.+. .++.+|..|+||||+|++.|+.+++++|++.|
T Consensus 157 ~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 YQDIVKLLMENGA---DQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHHHHHHHHHCCC---CCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 899999999864 36788999999999999999999999999875
No 39
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-37 Score=270.94 Aligned_cols=257 Identities=16% Similarity=0.094 Sum_probs=193.6
Q ss_pred hcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCcccc------C------CC-CC---CcHH
Q 048248 13 RHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSV------P------NH-KS---ETPM 76 (316)
Q Consensus 13 ~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~------~------~~-~g---~tpL 76 (316)
+....+.++.|+ ..|.+++..+..|.|+++ |+.++|++|++.+...... . +. .+ .+.+
T Consensus 28 ~~~~~dlv~~ll-~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 101 (327)
T 1sw6_A 28 ITFTHDLTSDFL-SSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQ 101 (327)
T ss_dssp EECCTTCCCSTT-TSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred hhhcCchHHHHh-hCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchh
Confidence 344455564544 556788999999999987 8899999999877442110 0 00 11 2235
Q ss_pred HHHHHhCChhHHHHhhccCCCCCCCCcchhhhhc-cCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCc
Q 048248 77 HVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRK-RDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNL 155 (316)
Q Consensus 77 h~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 155 (316)
|+|+..+..+++++|+..+.+ ++. +|..|+||||+|+..++.+++++|++.++++ +.++..|.
T Consensus 102 ~~a~~~~~~~~~~~l~~~g~d----------vn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~------n~~d~~g~ 165 (327)
T 1sw6_A 102 HVSFDSLLQEVNDAFPNTQLN----------LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR------LYGDNMGE 165 (327)
T ss_dssp --CHHHHHHHHHHHCTTSCCC----------SCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT------TBCCTTCC
T ss_pred HHHHHhhHHHHHHHHHhcCCC----------cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC------CCcCCCCC
Confidence 788888888888888876544 334 6899999999999999999999999998765 34567899
Q ss_pred hHHHHHHHhCc---HHHHHHHHHhccccccccccCCCcHHHHHHH----hCcHHHHHHhhcCC-----------------
Q 048248 156 TLLHSAIIKSQ---FVVMAKILEAKRDLINVRDERNRNPLRYAAA----LGHFKIACRLSDED----------------- 211 (316)
Q Consensus 156 t~lh~A~~~~~---~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~----~g~~~~~~~ll~~~----------------- 211 (316)
||||+|+..|+ .+.++.|+......++.+|..|+||||+|+. .|+.++++.|++..
T Consensus 166 TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~ 245 (327)
T 1sw6_A 166 SCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN 245 (327)
T ss_dssp CHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC--
T ss_pred CHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhh
Confidence 99999999988 6777888877766789999999999999999 88999999998753
Q ss_pred --CCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCC
Q 048248 212 --DSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSD 289 (316)
Q Consensus 212 --~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d 289 (316)
+.+++.++..|+||||.|+. +++|++. .++.+|..|+||||+|+..|+.+++++|++.+. .++.+|
T Consensus 246 ~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Ga---d~~~~d 313 (327)
T 1sw6_A 246 EKESKPNDKNGERKDSILENLD------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYGA---DPFIAN 313 (327)
T ss_dssp --------------CHHHHHCS------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTC---CTTCCC
T ss_pred cccCCcccccccCCChhHHHHH------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCcccC
Confidence 66677889999999999985 8889987 378899999999999999999999999999864 478899
Q ss_pred CCCCcHHHHHHHcC
Q 048248 290 VDGNTPLHLAAINN 303 (316)
Q Consensus 290 ~~g~t~L~~A~~~~ 303 (316)
.+|+||||+|++.|
T Consensus 314 ~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 314 KSGLRPVDFGAGLE 327 (327)
T ss_dssp TTSCCGGGGTCC--
T ss_pred CCCCCHHHHHHhcC
Confidence 99999999998764
No 40
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=7.2e-36 Score=256.20 Aligned_cols=247 Identities=18% Similarity=0.204 Sum_probs=198.8
Q ss_pred ccHHHHHHHhcCChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhC
Q 048248 4 VDHKLFRALRHGYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAG 83 (316)
Q Consensus 4 ~~~~l~~a~~~g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g 83 (316)
..++|+.|+..|+.+.++.++..+ .+++..+..|.||||+|+..|+.++|++|++.+++. +..+..|+||||+|+..|
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g 117 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERG-ADINYANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCG 117 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHC-CCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHT
T ss_pred CccHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcC
Confidence 357899999999999998888764 678889999999999999999999999999998774 567889999999999999
Q ss_pred ChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHH
Q 048248 84 NFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAII 163 (316)
Q Consensus 84 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~ 163 (316)
+.+++++|++.+.. +...+..|.||||+|+..+..+++..++........... ..+.+++
T Consensus 118 ~~~~v~~Ll~~g~~----------~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~-----~~~~~~~----- 177 (299)
T 1s70_B 118 YLDIAEYLISQGAH----------VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAAR-----KEEERIM----- 177 (299)
T ss_dssp CHHHHHHHHHTTCC----------TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHH-----HHHHHHH-----
T ss_pred CHHHHHHHHhCCCC----------CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhh-----hhhhhHH-----
Confidence 99999999987544 334688999999999999999999888875332211100 0111222
Q ss_pred hCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHh
Q 048248 164 KSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLH 243 (316)
Q Consensus 164 ~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~ 243 (316)
...+..++..+.......+..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++
T Consensus 178 ---~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 253 (299)
T 1s70_B 178 ---LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR-YDVNIKDYDGWTPLHAAAHWGKEEACRILVE 253 (299)
T ss_dssp ---HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred ---HHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHhcCCHHHHHHHHH
Confidence 233456666665555667889999999999999999999999665 5567889999999999999999999999998
Q ss_pred hCCCCccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248 244 SYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQ 278 (316)
Q Consensus 244 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~ 278 (316)
.+ .+++.+|..|.||||+|++. ..+.+..+++.
T Consensus 254 ~g-ad~~~~d~~g~t~l~~A~~~-~~~~l~~l~~~ 286 (299)
T 1s70_B 254 NL-CDMEAVNKVGQTAFDVADED-ILGYLEELQKK 286 (299)
T ss_dssp TT-CCTTCCCTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred cC-CCCCCcCCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence 76 45799999999999999764 44555555543
No 41
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.8e-36 Score=251.37 Aligned_cols=219 Identities=18% Similarity=0.221 Sum_probs=120.2
Q ss_pred ccCCCChHHHHHHHhCCHHHHHHHHhcCCC---ccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhc
Q 048248 34 TSQNGDTALHIAARFGHEILVMEILKHQSD---LVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRK 110 (316)
Q Consensus 34 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~ 110 (316)
++.+|+||||+|+..|+.+++++|++.+.. .++..+..|+||||+|+..|+.+++++|++.+.. +..
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----------~~~ 73 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD----------PEL 73 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC----------SCC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----------CCC
Confidence 456677777777777777777777765432 2445566677777777777777777777765433 223
Q ss_pred cCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCc
Q 048248 111 RDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRN 190 (316)
Q Consensus 111 ~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~t 190 (316)
.|..|+||||+|+..++.++++.|+..+...... ..++..+..|.|
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~----------------------------------~~~~~~~~~g~t 119 (236)
T 1ikn_D 74 RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH----------------------------------SILKATNYNGHT 119 (236)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS----------------------------------CGGGCCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHH----------------------------------HHhhccCCCCCC
Confidence 4556666666666666666666666654332111 113444455555
Q ss_pred HHHHHHHhCcHHHHHHhhcCCCCcccccCC-CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCCh
Q 048248 191 PLRYAAALGHFKIACRLSDEDDSLVYQHDC-NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA 269 (316)
Q Consensus 191 pLh~A~~~g~~~~~~~ll~~~~~~~~~~d~-~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 269 (316)
|||+|+..|+.++++.|++.+.. ++.++. .|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.
T Consensus 120 ~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~ 197 (236)
T 1ikn_D 120 CLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLAVDLQNPDLVSLLLKCG-ADVNRVTYQGYSPYQLTWGRPST 197 (236)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTT-CCSCCCCTTCCCGGGGCTTSSCH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcccCCCCCHHHHHHccCch
Confidence 55555555555555555544332 233443 5556666666656666666555543 23455555566666666666666
Q ss_pred hHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248 270 DVVVFILKQPEVEDLINSSDVDGNTPLHLA 299 (316)
Q Consensus 270 ~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A 299 (316)
+++++|++.+... ....++..|.||.+.+
T Consensus 198 ~~~~~Ll~~ga~~-~~~~~~~~~~~~~~~~ 226 (236)
T 1ikn_D 198 RIQQQLGQLTLEN-LQMLPESEDEESYDTE 226 (236)
T ss_dssp HHHHHHHTTSCGG-GSSCCCCCTTTCCCCC
T ss_pred HHHHHHHHcchhh-hhcCCccchHHHHhhh
Confidence 6666665554421 2234455555554433
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.2e-34 Score=239.48 Aligned_cols=194 Identities=20% Similarity=0.225 Sum_probs=166.8
Q ss_pred CCCcHHHHHHhcCChhHHHHHHhh-CCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccc----cccccCC
Q 048248 114 EGNTPLHNAVRKCDGKMAFTMIKK-DPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLI----NVRDERN 188 (316)
Q Consensus 114 ~g~t~L~~a~~~~~~~~~~~ll~~-~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~----~~~d~~g 188 (316)
.|.||||+|+..|+.++++.|+.. +.++ +..+..|.||||+|+..|+.++++.|++.+.+.. +.+|..|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g 75 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV------HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEG 75 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc------ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCC
Confidence 589999999999999999999987 4332 3456789999999999999999999998876432 5667899
Q ss_pred CcHHHHHHHhCcHHHHHHhhcCCCCcccccCC-------------CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccC
Q 048248 189 RNPLRYAAALGHFKIACRLSDEDDSLVYQHDC-------------NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNK 255 (316)
Q Consensus 189 ~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~-------------~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~ 255 (316)
.||||+|+..|+.++++.|++.+.. ++.++. .|.||||+|+..|+.+++++|++.+ .+++.+|..
T Consensus 76 ~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~d~~ 153 (232)
T 2rfa_A 76 QTALHIAVINQNVNLVRALLARGAS-VSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHG-ADIRAQDSL 153 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTT
T ss_pred cCHHHHHHHcCCHHHHHHHHhCCCC-CCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCC
Confidence 9999999999999999999987654 344443 7999999999999999999999875 457999999
Q ss_pred CCcHHHHHHHcCChhHH----HHHhcCccccc---ccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 256 NRNILHLAAQNGHADVV----VFILKQPEVED---LINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 256 g~tpLh~A~~~g~~~~~----~~Ll~~~~~~~---~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
|+||||+|+..|+.+++ ++|++.+.... ..+.+|..|+||||+|++.|+.+++++|++++
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g 220 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKR 220 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 99999999999999988 89998875321 12578999999999999999999999999875
No 43
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.8e-34 Score=238.47 Aligned_cols=211 Identities=19% Similarity=0.177 Sum_probs=157.9
Q ss_pred CCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCC
Q 048248 37 NGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGN 116 (316)
Q Consensus 37 ~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 116 (316)
.|+||||+|++.|+.++|++|++..+..++..|.+|+||||+|+..|+.+++++|++.+...... .....|..|.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-----~~~~~~~~g~ 76 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFE-----PMTSELYEGQ 76 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGC-----CCCSTTTTTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccc-----cccccCCCCc
Confidence 48899999999999999999998733345667888999999999999999999999865432110 1234567888
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA 196 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 196 (316)
||||+|+..++.++++.|++.+.++... +. .+.++ ...+..|..|.||||+|+
T Consensus 77 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~--~~~~~-------------------~~~~~~~~~g~t~L~~A~ 129 (232)
T 2rfa_A 77 TALHIAVINQNVNLVRALLARGASVSAR------AT--GSVFH-------------------YRPHNLIYYGEHPLSFAA 129 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCC------CC--SGGGS-------------------CCTTCSCCCCSSHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCCCcc------cC--Cccee-------------------ecccccccCCCCHHHHHH
Confidence 8999998888888888888887654321 11 11110 113455678888888888
Q ss_pred HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHH----HHHHhhCCCCc-----cccccCCCcHHHHHHHcC
Q 048248 197 ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSIL----ENLLHSYPDSI-----EFIDNKNRNILHLAAQNG 267 (316)
Q Consensus 197 ~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv----~~Ll~~~~~~~-----~~~d~~g~tpLh~A~~~g 267 (316)
..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++ ++|++.+.... +.+|..|+||||+|+..|
T Consensus 130 ~~~~~~~v~~Ll~~g-a~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g 208 (232)
T 2rfa_A 130 CVGSEEIVRLLIEHG-ADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208 (232)
T ss_dssp HHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcC
Confidence 888888888888664 45667788888888888888888877 88887665422 467888889999999888
Q ss_pred ChhHHHHHhcCcc
Q 048248 268 HADVVVFILKQPE 280 (316)
Q Consensus 268 ~~~~~~~Ll~~~~ 280 (316)
+.+++++|++.+.
T Consensus 209 ~~~~v~~Ll~~g~ 221 (232)
T 2rfa_A 209 NIVMFQHLMQKRK 221 (232)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCc
Confidence 8888888888764
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.1e-36 Score=248.09 Aligned_cols=200 Identities=26% Similarity=0.289 Sum_probs=169.5
Q ss_pred ccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCC
Q 048248 110 KRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNR 189 (316)
Q Consensus 110 ~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~ 189 (316)
..|.+|+||||+|+..|+.++++.|+..+.... .+.+..+..|.||||+|+..|+.++++.|+..+ ..++.+|..|.
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~ 79 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDL--AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-CDPELRDFRGN 79 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----C--CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-CCSCCCCTTCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccH--HHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCC
Confidence 358899999999999999999998888765321 123445678999999999999999999988765 45899999999
Q ss_pred cHHHHHHHhCcHHHHHHhhcCCCC-----cccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCcccccc-CCCcHHHHH
Q 048248 190 NPLRYAAALGHFKIACRLSDEDDS-----LVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDN-KNRNILHLA 263 (316)
Q Consensus 190 tpLh~A~~~g~~~~~~~ll~~~~~-----~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~-~g~tpLh~A 263 (316)
||||+|+..|+.++++.|+..+.. ..+..+..|+||||+|+..|+.+++++|++.+.. ++.++. .|+||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHH
Confidence 999999999999999999987743 3466788999999999999999999999988654 688887 999999999
Q ss_pred HHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 264 AQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 264 ~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
+..|+.+++++|++.+. .++.+|..|+||||+|+..++.+++++|+++++
T Consensus 159 ~~~~~~~~v~~Ll~~ga---~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga 208 (236)
T 1ikn_D 159 VDLQNPDLVSLLLKCGA---DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 208 (236)
T ss_dssp HHTTCHHHHHHHHTTTC---CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred HHcCCHHHHHHHHHcCC---CCCcccCCCCCHHHHHHccCchHHHHHHHHcch
Confidence 99999999999999864 467889999999999999999999999999864
No 45
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=6.4e-34 Score=229.95 Aligned_cols=194 Identities=19% Similarity=0.170 Sum_probs=172.6
Q ss_pred CCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccccccccc
Q 048248 70 HKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAK 149 (316)
Q Consensus 70 ~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~ 149 (316)
..+.||||.|+..|+.+.++.++..+... ++..|..|+||||+|+..++.++++.|++.+.++ +.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~---------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~------~~ 67 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQ---------VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI------NL 67 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCC---------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT------TC
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCC---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC------CC
Confidence 45889999999999999999988765421 4456889999999999999999999999987664 23
Q ss_pred CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248 150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA 229 (316)
Q Consensus 150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 229 (316)
.+..|.||||+|+..|+.++++.|+...+..++.+|..|.||||+|+..|+.++++.|++.+..+++.+|..|+||||+|
T Consensus 68 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 68 QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 56678999999999999999999998877778999999999999999999999999999998778888999999999999
Q ss_pred HhcCC-----HhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 230 SQNGQ-----LSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 230 ~~~g~-----~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
+..+. .+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|+++|
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HHhccchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99998 99999999876 456899999999999999999999999999764
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.1e-34 Score=240.02 Aligned_cols=198 Identities=19% Similarity=0.199 Sum_probs=162.8
Q ss_pred CCCcHHHHHHhcCChh----HHHHHHhhCCCcccccccccCCCCCchHHHHHHHh---CcHHHHHHHHHhcccccc----
Q 048248 114 EGNTPLHNAVRKCDGK----MAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIK---SQFVVMAKILEAKRDLIN---- 182 (316)
Q Consensus 114 ~g~t~L~~a~~~~~~~----~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~---~~~~~~~~ll~~~~~~~~---- 182 (316)
.|+||||.|+..|+.+ ++++++..+.++.... ...+..|.||||+|+.. |+.++++.|+..+.+ ++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~--~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~-~~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSA--YTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKD-SGNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGG--GSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHH-TTCSSC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCccccc--ccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCc-ccchhh
Confidence 3789999999999997 5566666766542100 01466899999999999 999999999987653 23
Q ss_pred -------ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCC-------------CCcHHHHHHhcCCHhHHHHHH
Q 048248 183 -------VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCN-------------GQSPLHLASQNGQLSILENLL 242 (316)
Q Consensus 183 -------~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~-------------g~tpLh~A~~~g~~~iv~~Ll 242 (316)
.+|..|.||||+|+..|+.++++.|++.+. +++.+|.. |.||||+|+..|+.+++++|+
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll 156 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA-DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLL 156 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 234779999999999999999999998754 45566665 999999999999999999999
Q ss_pred hh--CCCCccccccCCCcHHHHHHH--cCChh-------HHHHHhcCccccc----ccccCCCCCCcHHHHHHHcCChhH
Q 048248 243 HS--YPDSIEFIDNKNRNILHLAAQ--NGHAD-------VVVFILKQPEVED----LINSSDVDGNTPLHLAAINNHFNI 307 (316)
Q Consensus 243 ~~--~~~~~~~~d~~g~tpLh~A~~--~g~~~-------~~~~Ll~~~~~~~----~~~~~d~~g~t~L~~A~~~~~~~~ 307 (316)
+. .+.+++.+|..|+||||+|+. .++.+ ++++|++.+.... .++.+|..|+||||+|++.|+.++
T Consensus 157 ~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 157 ENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 83 455679999999999999999 78888 9999998864320 017889999999999999999999
Q ss_pred HHHHhhcC
Q 048248 308 ILVLARNM 315 (316)
Q Consensus 308 ~~~Ll~~~ 315 (316)
+++|++++
T Consensus 237 v~~Ll~~g 244 (256)
T 2etb_A 237 FRHILQRE 244 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhCC
Confidence 99999875
No 47
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.4e-34 Score=245.10 Aligned_cols=207 Identities=19% Similarity=0.220 Sum_probs=165.2
Q ss_pred hccCCCCCcHHHHHHhcCChhHHHHHHhhCCCccc-ccc-cccCCCCCchHHHHHHHh---CcHHHHHHHHHhcccc---
Q 048248 109 RKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIR-YNN-KAKQGPNNLTLLHSAIIK---SQFVVMAKILEAKRDL--- 180 (316)
Q Consensus 109 ~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~-~~~-~~~~~~~~~t~lh~A~~~---~~~~~~~~ll~~~~~~--- 180 (316)
+..|..|.||||.|++.|+.++++.|+..+..... ... ....+..|.||||+|+.. |+.++++.|+..+.+.
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 34688999999999999999999888874321110 000 012466899999999986 9999999999876431
Q ss_pred ---ccc----cccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCC--------------CCCcHHHHHHhcCCHhHHH
Q 048248 181 ---INV----RDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDC--------------NGQSPLHLASQNGQLSILE 239 (316)
Q Consensus 181 ---~~~----~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~--------------~g~tpLh~A~~~g~~~iv~ 239 (316)
++. .|..|.||||+|+..|+.++++.|++.+ .+++.++. .|.||||+|+..|+.++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 165 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENG-ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVK 165 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCC-CCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 222 5678999999999999999999999875 44556665 7999999999999999999
Q ss_pred HHHhh--CCCCccccccCCCcHHHHHHHcCC---------hhHHHHHhcCccccc----ccccCCCCCCcHHHHHHHcCC
Q 048248 240 NLLHS--YPDSIEFIDNKNRNILHLAAQNGH---------ADVVVFILKQPEVED----LINSSDVDGNTPLHLAAINNH 304 (316)
Q Consensus 240 ~Ll~~--~~~~~~~~d~~g~tpLh~A~~~g~---------~~~~~~Ll~~~~~~~----~~~~~d~~g~t~L~~A~~~~~ 304 (316)
+|++. .+.+++.+|..|+||||+|+..|+ .+++++|++.+.... .++.+|..|+||||+|++.|+
T Consensus 166 ~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 166 FLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 99983 456679999999999999999998 799999998764321 113589999999999999999
Q ss_pred hhHHHHHhhcCC
Q 048248 305 FNIILVLARNMS 316 (316)
Q Consensus 305 ~~~~~~Ll~~~~ 316 (316)
.+++++|+++++
T Consensus 246 ~~iv~~Ll~~ga 257 (273)
T 2pnn_A 246 IGVLAYILQREI 257 (273)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHCCC
Confidence 999999999763
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.4e-33 Score=221.27 Aligned_cols=155 Identities=29% Similarity=0.420 Sum_probs=135.1
Q ss_pred hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248 156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL 235 (316)
Q Consensus 156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 235 (316)
++|+.|+..|+.++|+.||+.+. ++|.+|.+|+||||+|+..++.++++.|+..+. +++.+|.+|+||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Ga-dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-d~~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGA-DVNASDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-chhhhccCCCCHHHHHHHcCCH
Confidence 57999999999999999988764 589999999999999999999999988887654 5667899999999999999999
Q ss_pred hHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 236 SILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 236 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
++|++|++.+. +++.+|..|+||||+|+..|+.+++++|++.+. .++.+|.+|+||||+|++.|+.+++++|+++|
T Consensus 84 ~~v~~Ll~~ga-dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga---d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 84 EVVKLLISKGA-DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA---DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp HHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred HHHHHHHHCcC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 99999998754 578999999999999999999999999998864 36778999999999999999999999999987
Q ss_pred C
Q 048248 316 S 316 (316)
Q Consensus 316 ~ 316 (316)
+
T Consensus 160 A 160 (169)
T 4gpm_A 160 G 160 (169)
T ss_dssp -
T ss_pred C
Confidence 4
No 49
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=3e-34 Score=243.15 Aligned_cols=221 Identities=15% Similarity=0.160 Sum_probs=139.5
Q ss_pred ccccccCCCChHHHHHHHhCCHHHHHHHHhc----CCCccc---cCCCCCCcHHHHHHHh---CChhHHHHhhccCCCCC
Q 048248 30 RILGTSQNGDTALHIAARFGHEILVMEILKH----QSDLVS---VPNHKSETPMHVAARA---GNFGAAQIFMRPHGNGN 99 (316)
Q Consensus 30 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~----~~~~~~---~~~~~g~tpLh~A~~~---g~~~~~~~l~~~~~~~~ 99 (316)
..+..+..|+||||+|++.|+.++|+.|++. +..... ..+..|+||||+|+.. |+.+++++|++.++...
T Consensus 5 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~ 84 (273)
T 2pnn_A 5 GEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTD 84 (273)
T ss_dssp ------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTT
T ss_pred cCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhcccc
Confidence 3456788999999999999999999988863 333211 3477899999999987 99999999998653211
Q ss_pred CCCcchhhhh----ccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHH
Q 048248 100 NTGTFDDILR----KRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILE 175 (316)
Q Consensus 100 ~~~~~~~~~~----~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~ 175 (316)
. ....++ ..|..|+||||+|+..++.++++.|++.++++... +..++ .
T Consensus 85 ~---~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~------~~~~~------------------~- 136 (273)
T 2pnn_A 85 S---LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAA------ANGDF------------------F- 136 (273)
T ss_dssp C---HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCC------BCSGG------------------G-
T ss_pred c---hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCcc------ccccc------------------c-
Confidence 0 000111 13445666666666666666666666655443211 11000 0
Q ss_pred hccccccccccCCCcHHHHHHHhCcHHHHHHhhcC--CCCcccccCCCCCcHHHHHHhcCC---------HhHHHHHHhh
Q 048248 176 AKRDLINVRDERNRNPLRYAAALGHFKIACRLSDE--DDSLVYQHDCNGQSPLHLASQNGQ---------LSILENLLHS 244 (316)
Q Consensus 176 ~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~--~~~~~~~~d~~g~tpLh~A~~~g~---------~~iv~~Ll~~ 244 (316)
........+..|.||||+|+..|+.++++.|++. .+.+++.+|..|+||||+|+..|+ .+++++|++.
T Consensus 137 -~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ 215 (273)
T 2pnn_A 137 -KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL 215 (273)
T ss_dssp -SSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred -ccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh
Confidence 0001122233777777777777777777777764 455566677777777777777776 6777777766
Q ss_pred CCCCcc-------ccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 245 YPDSIE-------FIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 245 ~~~~~~-------~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
+.. ++ .+|..|+||||+|+..|+.+++++|++.+.
T Consensus 216 ga~-~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 216 GAK-LHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHH-HCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred hhh-cccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCC
Confidence 432 32 467777788888888788888887777765
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1.7e-33 Score=236.23 Aligned_cols=201 Identities=17% Similarity=0.181 Sum_probs=164.1
Q ss_pred CCcHHHHHHHhCChh----HHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhc---CChhHHHHHHhhCCCcccc
Q 048248 72 SETPMHVAARAGNFG----AAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRK---CDGKMAFTMIKKDPEPIRY 144 (316)
Q Consensus 72 g~tpLh~A~~~g~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~---~~~~~~~~ll~~~~~~~~~ 144 (316)
|+||||+|+..|+.+ ++++|+..+.+.+. .....|..|+||||+|+.. ++.++++.|++.+......
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~------~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~ 75 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTD------SAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNP 75 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTS------GGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCS
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCccc------ccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccch
Confidence 788999999999987 44555555443221 0012688999999999999 9999999999987544211
Q ss_pred c---c--cccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccC-------------CCcHHHHHHHhCcHHHHHH
Q 048248 145 N---N--KAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDER-------------NRNPLRYAAALGHFKIACR 206 (316)
Q Consensus 145 ~---~--~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~-------------g~tpLh~A~~~g~~~~~~~ 206 (316)
. + ....+..|.||||+|+..|+.++++.|+..+. +++.+|.. |.||||+|+..|+.++++.
T Consensus 76 ~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~ 154 (256)
T 2etb_A 76 KPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGA-DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTY 154 (256)
T ss_dssp SCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 1 1 11234579999999999999999999998764 57888876 9999999999999999999
Q ss_pred hhcC--CCCcccccCCCCCcHHHHHHh--cCCHh-------HHHHHHhhCCCCc-------cccccCCCcHHHHHHHcCC
Q 048248 207 LSDE--DDSLVYQHDCNGQSPLHLASQ--NGQLS-------ILENLLHSYPDSI-------EFIDNKNRNILHLAAQNGH 268 (316)
Q Consensus 207 ll~~--~~~~~~~~d~~g~tpLh~A~~--~g~~~-------iv~~Ll~~~~~~~-------~~~d~~g~tpLh~A~~~g~ 268 (316)
|++. .+.+++.+|..|+||||+|+. .++.+ ++++|++.+. ++ +.+|..|+||||+|+..|+
T Consensus 155 Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga-~~~~~~~~~~~~d~~g~tpL~~A~~~g~ 233 (256)
T 2etb_A 155 LLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGA-RLCPTVQLEEISNHQGLTPLKLAAKEGK 233 (256)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH-HHSTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCC-CcccccccccccCCCCCCHHHHHHHhCC
Confidence 9985 566778899999999999999 88888 9999998764 35 7899999999999999999
Q ss_pred hhHHHHHhcCcc
Q 048248 269 ADVVVFILKQPE 280 (316)
Q Consensus 269 ~~~~~~Ll~~~~ 280 (316)
.+++++|++.+.
T Consensus 234 ~~~v~~Ll~~g~ 245 (256)
T 2etb_A 234 IEIFRHILQREF 245 (256)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhCCC
Confidence 999999998764
No 51
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-34 Score=249.63 Aligned_cols=228 Identities=15% Similarity=0.107 Sum_probs=166.2
Q ss_pred cCChHHHHHHHHhcCCcccc-----------------ccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHH
Q 048248 14 HGYTDKVREFARLNGNRILG-----------------TSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPM 76 (316)
Q Consensus 14 ~g~~~~~~~ll~~~~~~~~~-----------------~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpL 76 (316)
.|+.+.++.|+..+.. ++. ......+.+|+|+..+..+++++|++.+.+.....|.+|+|||
T Consensus 57 ~g~~~~v~~Ll~~g~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpL 135 (327)
T 1sw6_A 57 NEQKMKLEAFLQRLLF-PEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPL 135 (327)
T ss_dssp HHHHHHHHHHHHHHHC--------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHH
T ss_pred CchhHHHHHHHHhccC-CccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHH
Confidence 3889999888876522 121 0111123357788777788888888888775433788999999
Q ss_pred HHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCC---hhHHHHHHhhCCCcccccccccCCCC
Q 048248 77 HVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCD---GKMAFTMIKKDPEPIRYNNKAKQGPN 153 (316)
Q Consensus 77 h~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~~~ 153 (316)
|+|+..|+.+++++|++.+++ ++.+|..|+||||+|+..++ .+++..|+..+... .+..+..
T Consensus 136 h~Aa~~g~~~~v~~Ll~~Gad----------~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~-----~~~~d~~ 200 (327)
T 1sw6_A 136 HWLTSIANLELVKHLVKHGSN----------RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC-----LILEDSM 200 (327)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC----------TTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG-----GGEECTT
T ss_pred HHHHHcCCHHHHHHHHHcCCC----------CCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc-----ccCCCCC
Confidence 999999999999999997654 34568999999999999887 57777777765322 2345678
Q ss_pred CchHHHHHHH----hCcHHHHHHHHHhc-------------------cccccccccCCCcHHHHHHHhCcHHHHHHhhcC
Q 048248 154 NLTLLHSAII----KSQFVVMAKILEAK-------------------RDLINVRDERNRNPLRYAAALGHFKIACRLSDE 210 (316)
Q Consensus 154 ~~t~lh~A~~----~~~~~~~~~ll~~~-------------------~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~ 210 (316)
|.||||+|+. .|+.++++.|++.. +.+++.+|..|.||||+|+. ++.|+..
T Consensus 201 g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~ 274 (327)
T 1sw6_A 201 NRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN 274 (327)
T ss_dssp CCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH
T ss_pred CCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh
Confidence 9999999999 89999999998763 45688899999999999985 6677765
Q ss_pred CCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248 211 DDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG 267 (316)
Q Consensus 211 ~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 267 (316)
+++.+|..|+||||+|+..|+.++|++|++.+ ++++.+|..|+||||+|++.|
T Consensus 275 ---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 ---MLNAQDSNGDTCLNIAARLGNISIVDALLDYG-ADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp ---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT-CCTTCCCTTSCCGGGGTCC--
T ss_pred ---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHhcC
Confidence 36778999999999999999999999999875 457999999999999998765
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.6e-33 Score=235.61 Aligned_cols=201 Identities=16% Similarity=0.127 Sum_probs=163.5
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHh----hCCCcccccccccCCCCCchHHHHHH---HhCcHHHHHHHHHhccc-----
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIK----KDPEPIRYNNKAKQGPNNLTLLHSAI---IKSQFVVMAKILEAKRD----- 179 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~----~~~~~~~~~~~~~~~~~~~t~lh~A~---~~~~~~~~~~ll~~~~~----- 179 (316)
+..|+||||.|++.|+.+.++.|+. .+....... ...+..|.||||+|+ ..|+.++++.|+..+.+
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~--~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEE--FREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGG--GSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhh--hhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 4578899999999999996555444 665543211 123457999999999 67999999999987532
Q ss_pred -----cccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccC--------------CCCCcHHHHHHhcCCHhHHHH
Q 048248 180 -----LINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHD--------------CNGQSPLHLASQNGQLSILEN 240 (316)
Q Consensus 180 -----~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~iv~~ 240 (316)
..+..|..|+||||+|+..|+.++++.|++.+. +++.++ ..|+||||+|+..|+.+++++
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA-DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC-CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 234456689999999999999999999998754 455666 579999999999999999999
Q ss_pred HHhh--CCCCccccccCCCcHHHHHHHcCC---------hhHHHHHhcCcccc----cccccCCCCCCcHHHHHHHcCCh
Q 048248 241 LLHS--YPDSIEFIDNKNRNILHLAAQNGH---------ADVVVFILKQPEVE----DLINSSDVDGNTPLHLAAINNHF 305 (316)
Q Consensus 241 Ll~~--~~~~~~~~d~~g~tpLh~A~~~g~---------~~~~~~Ll~~~~~~----~~~~~~d~~g~t~L~~A~~~~~~ 305 (316)
|++. .+.+++.+|..|+||||+|+..|+ .+++++|++.+... ..++.+|..|+||||+|++.|+.
T Consensus 159 Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 159 LTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 9983 355679999999999999999888 69999999876432 01167899999999999999999
Q ss_pred hHHHHHhhcC
Q 048248 306 NIILVLARNM 315 (316)
Q Consensus 306 ~~~~~Ll~~~ 315 (316)
+++++|++++
T Consensus 239 ~~v~~Ll~~g 248 (260)
T 3jxi_A 239 GIFQHIIRRE 248 (260)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhC
Confidence 9999999975
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=1.9e-32 Score=230.32 Aligned_cols=204 Identities=14% Similarity=0.130 Sum_probs=162.4
Q ss_pred CCCCcHHHHHHHhCChhHHHHhhc----cCCCCCCCCcchhhhhccCCCCCcHHHHHH---hcCChhHHHHHHhhCCCcc
Q 048248 70 HKSETPMHVAARAGNFGAAQIFMR----PHGNGNNTGTFDDILRKRDEEGNTPLHNAV---RKCDGKMAFTMIKKDPEPI 142 (316)
Q Consensus 70 ~~g~tpLh~A~~~g~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~---~~~~~~~~~~ll~~~~~~~ 142 (316)
..|+||||.|+..|+.+.++.+++ .+...+.. -...|..|+||||+|+ +.++.++++.|+..+....
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~------~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~ 76 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDE------EFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTG 76 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSG------GGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchh------hhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhccccc
Confidence 457788888888888885544443 44332211 1124578999999999 6799999999999864321
Q ss_pred cc-----cccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccc--------------cCCCcHHHHHHHhCcHHH
Q 048248 143 RY-----NNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRD--------------ERNRNPLRYAAALGHFKI 203 (316)
Q Consensus 143 ~~-----~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d--------------~~g~tpLh~A~~~g~~~~ 203 (316)
.. ......+..|.||||+|+..|+.++++.|++.+. +++.++ ..|.||||+|+..|+.++
T Consensus 77 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 155 (260)
T 3jxi_A 77 NMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGA-DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI 155 (260)
T ss_dssp CHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHH
T ss_pred chHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCC-CcCccccccccCcccccccccCCCCHHHHHHHcCCHHH
Confidence 10 1112334478999999999999999999998764 578887 689999999999999999
Q ss_pred HHHhhcC--CCCcccccCCCCCcHHHHHHhcCC---------HhHHHHHHhhCCCCc-------cccccCCCcHHHHHHH
Q 048248 204 ACRLSDE--DDSLVYQHDCNGQSPLHLASQNGQ---------LSILENLLHSYPDSI-------EFIDNKNRNILHLAAQ 265 (316)
Q Consensus 204 ~~~ll~~--~~~~~~~~d~~g~tpLh~A~~~g~---------~~iv~~Ll~~~~~~~-------~~~d~~g~tpLh~A~~ 265 (316)
++.|++. .+.+++.+|..|+||||+|+..|+ .+++++|++.+.. + +.+|..|+||||+|+.
T Consensus 156 v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~-~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 156 VHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK-LFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp HHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH-HCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred HHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc-cccccchhhcccCCCCCHHHHHHH
Confidence 9999985 566778899999999999999888 7999999987633 3 6789999999999999
Q ss_pred cCChhHHHHHhcCccc
Q 048248 266 NGHADVVVFILKQPEV 281 (316)
Q Consensus 266 ~g~~~~~~~Ll~~~~~ 281 (316)
.|+.+++++|++.+..
T Consensus 235 ~g~~~~v~~Ll~~g~~ 250 (260)
T 3jxi_A 235 TGKIGIFQHIIRREIA 250 (260)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHhCCC
Confidence 9999999999988653
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=1.8e-32 Score=232.55 Aligned_cols=194 Identities=19% Similarity=0.249 Sum_probs=166.8
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHH
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRY 194 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 194 (316)
+.+++|.|+..+..+.++.++....+. ..+..+..|.||||+|+..|+.++++.|+..+...++..|..|.||||+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~----~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDY----VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHH----HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhh----cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH
Confidence 456788888888888888887654321 1244677899999999999999999999998876789999999999999
Q ss_pred HH-----HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCCh
Q 048248 195 AA-----ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA 269 (316)
Q Consensus 195 A~-----~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 269 (316)
|+ ..++.++++.|+..+. +....+..|+||||+|+..|+.++|++|++.+. +++.+|..|+||||+|+..|+.
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~ga-d~n~~d~~G~TpLh~A~~~g~~ 229 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGN-INAKASQAGQTALMLAVSHGRVDVVKALLACEA-DVNVQDDDGSTALMCACEHGHK 229 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHHCCCH
Confidence 99 6678899999887764 445678899999999999999999999998754 5799999999999999999999
Q ss_pred hHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 270 DVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 270 ~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
+++++|++..+ ..++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 230 ~iv~~Ll~~~g--ad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 230 EIAGLLLAVPS--CDISLTDRDGSTALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHTSTT--CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHHHHhcCC--CCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhccC
Confidence 99999998322 3467889999999999999999999999999863
No 55
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.98 E-value=3.5e-31 Score=207.65 Aligned_cols=156 Identities=24% Similarity=0.338 Sum_probs=139.5
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAA 196 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 196 (316)
++|+.|++.|+.++++.|++.++++ +.++..|.||||+|+..++.++++.|+..+. +++.+|.+|+||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv------n~~d~~g~t~l~~a~~~~~~~~~~~ll~~ga-d~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV------NASDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC------CCcCCCCCCHHHHHHHcCCHHHHHHHHhccc-chhhhccCCCCHHHHHH
Confidence 4799999999999999999998765 3457789999999999999999999998764 58999999999999999
Q ss_pred HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHh
Q 048248 197 ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFIL 276 (316)
Q Consensus 197 ~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll 276 (316)
..|+.++++.|++.+ .+++.+|.+|+||||+|+..|+.++|++|++.+. +++.+|..|+||||+|+..|+.+++++|+
T Consensus 79 ~~g~~~~v~~Ll~~g-advn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga-d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll 156 (169)
T 4gpm_A 79 ENGHKEVVKLLISKG-ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGA-DVNTSDSDGRTPLDLAREHGNEEVVKLLE 156 (169)
T ss_dssp HTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCc-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999999765 4567899999999999999999999999998764 57999999999999999999999999999
Q ss_pred cCccc
Q 048248 277 KQPEV 281 (316)
Q Consensus 277 ~~~~~ 281 (316)
+.|..
T Consensus 157 ~~GA~ 161 (169)
T 4gpm_A 157 KQGGW 161 (169)
T ss_dssp TC---
T ss_pred HCCCC
Confidence 99864
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=2.5e-31 Score=225.54 Aligned_cols=193 Identities=15% Similarity=0.205 Sum_probs=167.6
Q ss_pred CCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCC
Q 048248 72 SETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQG 151 (316)
Q Consensus 72 g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~ 151 (316)
+++|+|.|+..++.+.++.++... .+..++..|.+|+||||+|+..++.++++.|+..++... +..+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~--------~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-----~~~~ 142 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARL--------LDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-----DKQN 142 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHH--------HHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-----TCCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHH--------HhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-----CCCC
Confidence 567899999999999999887642 223466789999999999999999999999999986332 3456
Q ss_pred CCCchHHHHHH-----HhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHH
Q 048248 152 PNNLTLLHSAI-----IKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPL 226 (316)
Q Consensus 152 ~~~~t~lh~A~-----~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpL 226 (316)
..|.||||+|+ ..++.++++.|+..+. ..+..|..|+||||+|+..|+.++++.|++.+ .+++.+|..|+|||
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~g-ad~n~~d~~G~TpL 220 (276)
T 4hbd_A 143 RAGYSPIMLTALATLKTQDDIETVLQLFRLGN-INAKASQAGQTALMLAVSHGRVDVVKALLACE-ADVNVQDDDGSTAL 220 (276)
T ss_dssp TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhCC-CCCCCCCCCCCCHH
Confidence 68999999999 6788999999888774 46788899999999999999999999999875 45678899999999
Q ss_pred HHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 227 HLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 227 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|+|+..|+.+++++|++..+.+++.+|..|+||||+|+..|+.+++++|++..
T Consensus 221 h~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 221 MCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 99999999999999998556678999999999999999999999999999764
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=5.9e-31 Score=211.13 Aligned_cols=160 Identities=20% Similarity=0.189 Sum_probs=135.5
Q ss_pred CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248 150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA 229 (316)
Q Consensus 150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 229 (316)
++..|.||||+|+..|+.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFD-KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-NVNTKDFSGKTPLMWS 108 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcc-ccccccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHH
Confidence 45678889999998888888888887754 478888889999999999999999888887654 4567888899999999
Q ss_pred HhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHH
Q 048248 230 SQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIIL 309 (316)
Q Consensus 230 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~ 309 (316)
+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|+..|+.++++
T Consensus 109 ~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA---DISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp HHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC---CTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC---CCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 9999999999999775 4468889999999999999999999999998754 36778889999999999999999999
Q ss_pred HHhhcC
Q 048248 310 VLARNM 315 (316)
Q Consensus 310 ~Ll~~~ 315 (316)
+|++.+
T Consensus 185 ~Ll~~~ 190 (192)
T 2rfm_A 185 IFTEVR 190 (192)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 998764
No 58
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.7e-30 Score=203.76 Aligned_cols=157 Identities=21% Similarity=0.226 Sum_probs=136.7
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN 232 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~ 232 (316)
.|.||||.|+..|+.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|++.+ .+++..|..|.||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQEN-VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSS-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCC-CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc
Confidence 46799999999999999999998764 47888999999999999999999999998774 45567888999999999999
Q ss_pred CCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHh
Q 048248 233 GQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLA 312 (316)
Q Consensus 233 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll 312 (316)
|+.+++++|++.+. +++..|..|.||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|+
T Consensus 80 ~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 80 GYTDIVKMLLDCGV-DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA---DPTIETDSGYNSMDLAVALGYRSVQQVIE 155 (167)
T ss_dssp TCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHHHCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 99999999998754 468889999999999999999999999998764 35678889999999999999999999998
Q ss_pred hcC
Q 048248 313 RNM 315 (316)
Q Consensus 313 ~~~ 315 (316)
+++
T Consensus 156 ~~~ 158 (167)
T 3v31_A 156 SHL 158 (167)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 59
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=8.6e-31 Score=204.25 Aligned_cols=157 Identities=25% Similarity=0.309 Sum_probs=137.9
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG 233 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g 233 (316)
..||||.|+..|+.++++.|++.+ ..++.+|..|+||||+|+. |+.++++.|++.+ .+++.+|..|+||||+|+..|
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 81 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQVMKL-GNPEIARRLLLRG-ANPDLKDRTGFAVIHDAARAG 81 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSC-CCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCC-CCccccCccCccHHHHHHc-CcHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcC
Confidence 458999999999999999998765 4578899999999999999 9999999999775 456678899999999999999
Q ss_pred CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 234 QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..|+.+++++|++
T Consensus 82 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~--~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~ 158 (162)
T 1ihb_A 82 FLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS--NVGHRNHKGDTACDLARLYGRNEVVSLMQA 158 (162)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC--CCCCcCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999999999875 45788999999999999999999999999988653 257788999999999999999999999999
Q ss_pred cCC
Q 048248 314 NMS 316 (316)
Q Consensus 314 ~~~ 316 (316)
+++
T Consensus 159 ~GA 161 (162)
T 1ihb_A 159 NGA 161 (162)
T ss_dssp TC-
T ss_pred hCC
Confidence 874
No 60
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2e-30 Score=204.26 Aligned_cols=154 Identities=23% Similarity=0.244 Sum_probs=78.5
Q ss_pred hHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCH
Q 048248 156 TLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQL 235 (316)
Q Consensus 156 t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 235 (316)
||||.|+..|+.+.++.|+..++..++.+|..|+||||+|+..|+.++++.|++.+. +++..|..|.||||+|+..|+.
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~ 82 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA-DPHILAKERESALSLASTGGYT 82 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTCCCHHHHHHHTTCH
T ss_pred hhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CchhhcccCCCHHHHHHHCCCH
Confidence 455555555555555555554444445555555555555555555555555554332 2334455555555555555555
Q ss_pred hHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248 236 SILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARN 314 (316)
Q Consensus 236 ~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 314 (316)
+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|.||||+|++.++.+++++|+++
T Consensus 83 ~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 83 DIVGLLLERDV-DINIYDWNGGTPLLYAVRGNHVKCVEALLARGA---DLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp HHHHHHHTTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 55555554432 234555555555555555555555555555432 2344455555555555555555555555543
No 61
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=2.4e-30 Score=200.48 Aligned_cols=155 Identities=24% Similarity=0.321 Sum_probs=140.0
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG 233 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g 233 (316)
+.||||.|+..|+.+.++.|+...+..++..|..|.||||+ +..|+.++++.|++.+ .+++.+|..|.||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 79 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQG-ASPNVQDTSGTSPVHDAARTG 79 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHcC
Confidence 45899999999999999999988555688999999999999 9999999999999775 456778999999999999999
Q ss_pred CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 234 QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++. . .++.+|.+|.||||+|+..|+.+++++|++
T Consensus 80 ~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~---~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 80 FLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S---DLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp CHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S---CTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c---CCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 999999999876 45789999999999999999999999999987 2 367889999999999999999999999998
Q ss_pred cC
Q 048248 314 NM 315 (316)
Q Consensus 314 ~~ 315 (316)
++
T Consensus 155 ~~ 156 (156)
T 1bd8_A 155 HM 156 (156)
T ss_dssp TC
T ss_pred hC
Confidence 75
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=7.4e-30 Score=200.52 Aligned_cols=158 Identities=27% Similarity=0.294 Sum_probs=140.9
Q ss_pred CCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHh
Q 048248 152 PNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQ 231 (316)
Q Consensus 152 ~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~ 231 (316)
..+.|||+.|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.++++.|++.+. +++..|..|.||||+|+.
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~ 89 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGA-DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-DVNAVDHAGMTPLRLAAL 89 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHH
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHH
Confidence 356799999999999999999998764 578899999999999999999999999997754 456789999999999999
Q ss_pred cCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248 232 NGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL 311 (316)
Q Consensus 232 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 311 (316)
.|+.+++++|++.+. .++.+|..|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|++.++.+++++|
T Consensus 90 ~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~~~~~~L 165 (169)
T 2y1l_E 90 FGHLEIVEVLLKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA---DVNAQDKFGKTAFDISIDNGNEDLAEIL 165 (169)
T ss_dssp TTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHhCCHHHHHHH
Confidence 999999999998754 468899999999999999999999999999864 3677899999999999999999999999
Q ss_pred hhcC
Q 048248 312 ARNM 315 (316)
Q Consensus 312 l~~~ 315 (316)
++.|
T Consensus 166 ~~~G 169 (169)
T 2y1l_E 166 QKLN 169 (169)
T ss_dssp HTC-
T ss_pred HHcC
Confidence 9864
No 63
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.6e-29 Score=202.70 Aligned_cols=163 Identities=20% Similarity=0.210 Sum_probs=145.8
Q ss_pred hhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccC
Q 048248 108 LRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDER 187 (316)
Q Consensus 108 ~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~ 187 (316)
++.+|..|+||||+|+..++.++++.|++.+..+ ...+..|.||||+|+..|+.++++.|+..+. .++.+|..
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~ 100 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL------EDKDIEGSTALIWAVKNNRLGIAEKLLSKGS-NVNTKDFS 100 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTT
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc------ccccccCccHHHHHHHcCCHHHHHHHHHCCC-CCCCCCCC
Confidence 4557899999999999999999999999987654 3356679999999999999999999998765 58899999
Q ss_pred CCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcC
Q 048248 188 NRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNG 267 (316)
Q Consensus 188 g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g 267 (316)
|.||||+|+..|+.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|
T Consensus 101 g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~ 178 (192)
T 2rfm_A 101 GKTPLMWSIIFGYSEMSYFLLEHG-ANVNDRNLEGETPLIVASKYGRSEIVKKLLELG-ADISARDLTGLTAEASARIFG 178 (192)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTT-CCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHhC
Confidence 999999999999999999999765 456778999999999999999999999999875 457899999999999999999
Q ss_pred ChhHHHHHhcCc
Q 048248 268 HADVVVFILKQP 279 (316)
Q Consensus 268 ~~~~~~~Ll~~~ 279 (316)
+.+++++|++.+
T Consensus 179 ~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 179 RQEVIKIFTEVR 190 (192)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHhcc
Confidence 999999999754
No 64
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=3e-30 Score=201.85 Aligned_cols=160 Identities=22% Similarity=0.240 Sum_probs=137.2
Q ss_pred CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248 151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS 230 (316)
Q Consensus 151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 230 (316)
+..+.||||.|+..|+.+.++.|+...+..++..+..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-DVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCC-CCCccCCCCCCHHHHHH
Confidence 34567999999999999999999887766677888889999999999999999999987754 45678889999999999
Q ss_pred hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHH
Q 048248 231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILV 310 (316)
Q Consensus 231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~ 310 (316)
..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.+. .++.+|.+|+||||+|+. ++.+++++
T Consensus 84 ~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~a~~-~~~~i~~~ 158 (165)
T 3twr_A 84 SYGHYEVAELLVKHGA-VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGA---DPTKKNRDGNTPLDLVKD-GDTDIQDL 158 (165)
T ss_dssp HTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCTGGGSCT-TCHHHHHH
T ss_pred HcCcHHHHHHHHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCcccCCCCCChhHhHhc-CChHHHHH
Confidence 9999999999998754 468899999999999999999999999998864 367889999999999777 89999999
Q ss_pred HhhcCC
Q 048248 311 LARNMS 316 (316)
Q Consensus 311 Ll~~~~ 316 (316)
|+++++
T Consensus 159 L~~~gA 164 (165)
T 3twr_A 159 LRGDAA 164 (165)
T ss_dssp HHTC--
T ss_pred Hhhccc
Confidence 998874
No 65
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=3.4e-32 Score=239.35 Aligned_cols=259 Identities=11% Similarity=0.076 Sum_probs=157.3
Q ss_pred CChHHHHHHHHhcCCccccccCCCChHHHHHHHhCCHHHHHHHHhcCCCcc--ccCCCCCCcHHHHHHHhCChhHHHHhh
Q 048248 15 GYTDKVREFARLNGNRILGTSQNGDTALHIAARFGHEILVMEILKHQSDLV--SVPNHKSETPMHVAARAGNFGAAQIFM 92 (316)
Q Consensus 15 g~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~tpLh~A~~~g~~~~~~~l~ 92 (316)
++.+.++.++..+ .+++||||+|++.|+.++|++|++.++... ...+..|.||||+|+..|+.+++++|+
T Consensus 77 ~~~~~~~~l~~~g--------~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll 148 (376)
T 2aja_A 77 NAKQLWSDAHKKG--------IKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC 148 (376)
T ss_dssp TCTTHHHHHHHHT--------CCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHcC--------CCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHH
Confidence 4555554444332 345699999999999999999998876221 123446788999999999999999999
Q ss_pred ccCCCCCCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHH-HhCcHHHHH
Q 048248 93 RPHGNGNNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAI-IKSQFVVMA 171 (316)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~-~~~~~~~~~ 171 (316)
+.+++... ..++ +.+ +||||+|+..|+.+++++|++.+++... ...+..|.||||+|+ ..|+.++++
T Consensus 149 ~~gad~~~-----~~i~--~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~----~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 149 ELAPTEIM-----AMIQ--AEN-YHAFRLAAENGHLHVLNRLCELAPTEAT----AMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp HSCTTTHH-----HHHS--HHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHH----HHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred hCCCCccc-----cccC--CCC-CCHHHHHHHCCCHHHHHHHHHcCCccch----hccCCCCCCHHHHHHHHCCCHHHHH
Confidence 86532100 0111 222 8899999999999999999988765421 002335679999999 999999998
Q ss_pred HHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHh---------------
Q 048248 172 KILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLS--------------- 236 (316)
Q Consensus 172 ~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~--------------- 236 (316)
.|+..+. .|.||||+|++.|+.++++.|+..+.. .+..+ ++++.|+..|+.+
T Consensus 217 ~Ll~~ga--------~~~taL~~Aa~~g~~evv~lL~~~ga~-~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~ 283 (376)
T 2aja_A 217 FLLDCPV--------MLAYAEIHEFEYGEKYVNPFIARHVNR-LKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLR 283 (376)
T ss_dssp HHTTSHH--------HHHHHHHCTTTTTTTTHHHHHHHHHHH-HHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHH
T ss_pred HHHhCCC--------ccchHHHHHHHCCCHHHHHHHHhcCcc-ccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHH
Confidence 8887431 278999999999998888888765433 22222 3455555555544
Q ss_pred ------------HHHHHHhhCCCC----ccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHH
Q 048248 237 ------------ILENLLHSYPDS----IEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAA 300 (316)
Q Consensus 237 ------------iv~~Ll~~~~~~----~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 300 (316)
.+++|++..... .....+.+.||||+|+..|+.+++++|++.+.. ++..|+||+.+|.
T Consensus 284 ~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~v------~~~~~~~~~~~~~ 357 (376)
T 2aja_A 284 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSV------LALTKANNYYINE 357 (376)
T ss_dssp HHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSHHH------HHSCC--------
T ss_pred HHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcChHH------HHHHHHhcccccc
Confidence 334444321100 011234567889999999999999999987643 3557899999999
Q ss_pred HcCChhHHHHHh
Q 048248 301 INNHFNIILVLA 312 (316)
Q Consensus 301 ~~~~~~~~~~Ll 312 (316)
..|+.+++++-+
T Consensus 358 ~~~~~~~~~~~~ 369 (376)
T 2aja_A 358 TGGRLDLRAVAL 369 (376)
T ss_dssp ------------
T ss_pred ccccccHHHHHH
Confidence 999888877644
No 66
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=7.4e-30 Score=202.42 Aligned_cols=157 Identities=18% Similarity=0.212 Sum_probs=96.2
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcC
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNG 233 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g 233 (316)
+.++||.|+..|+.++++.|+...+..++.+|..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~ 83 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG-ARINVMNRGDDTPLHLAASHG 83 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcC
Confidence 4566666666666666666666555555666666666666666666666666666553 334455666666666666666
Q ss_pred CHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 234 QLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 234 ~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|+..++.+++++|++
T Consensus 84 ~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 84 HRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA---LVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp CHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC---CcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 666666666553 3346666666666666666666666666666543 245556666666666666666666666665
Q ss_pred cC
Q 048248 314 NM 315 (316)
Q Consensus 314 ~~ 315 (316)
.+
T Consensus 160 ~g 161 (179)
T 3f6q_A 160 MG 161 (179)
T ss_dssp TT
T ss_pred hh
Confidence 44
No 67
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.96 E-value=4.5e-29 Score=196.54 Aligned_cols=170 Identities=18% Similarity=0.142 Sum_probs=142.5
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHH
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRY 194 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 194 (316)
+.||||.|+..|+.++++.++..++... +..+..|.||||+|+..|+.++++.|++.+. +++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLV-----NKPDERGFTPLIWASAFGEIETVRFLLEWGA-DPHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGG-----GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC-CTTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccc-----cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CchhhcccCCCHHHH
Confidence 4689999999999999999999876533 3356689999999999999999999998764 589999999999999
Q ss_pred HHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHH
Q 048248 195 AAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVF 274 (316)
Q Consensus 195 A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 274 (316)
|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++
T Consensus 76 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERD-VDINIYDWNGGTPLLYAVRGNHVKCVEALLARG-ADLTTEADSGYTPMDLAVALGYRKVQQV 153 (172)
T ss_dssp HHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHhCcHHHHHH
Confidence 99999999999999765 456778999999999999999999999999876 4578999999999999999999999999
Q ss_pred HhcCcccccccccCCCCCCcH
Q 048248 275 ILKQPEVEDLINSSDVDGNTP 295 (316)
Q Consensus 275 Ll~~~~~~~~~~~~d~~g~t~ 295 (316)
|++.+.. +..++..|.||
T Consensus 154 L~~~~~~---~~~~~~~~~~p 171 (172)
T 3v30_A 154 IENHILK---LFQSNLVPADP 171 (172)
T ss_dssp HHHHHHH---HSCC-------
T ss_pred HHHHHHH---HhcccCCCCCC
Confidence 9988643 45567777776
No 68
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.6e-31 Score=235.09 Aligned_cols=245 Identities=17% Similarity=0.098 Sum_probs=181.2
Q ss_pred CChHHHHHHH-hCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCCCCCCcchhhhhccCCCCC
Q 048248 38 GDTALHIAAR-FGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNGNNTGTFDDILRKRDEEGN 116 (316)
Q Consensus 38 g~t~Lh~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~ 116 (316)
+.+++++|.. .+..+++++++..+. ++.||||+|+..|+.+++++|++.+..... ....+..|.
T Consensus 65 ~ll~~~~a~~~~~~~~~~~~l~~~g~--------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-------~~~~~~~~~ 129 (376)
T 2aja_A 65 QLLCLYYAHYNRNAKQLWSDAHKKGI--------KSEVICFVAAITGCSSALDTLCLLLTSDEI-------VKVIQAENY 129 (376)
T ss_dssp HHHHHHHHHTTTTCTTHHHHHHHHTC--------CHHHHHHHHHHHCCHHHHHHHTTC--CCSS-------CC--CHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHcCC--------CcCCHHHHHHHcCCHHHHHHHHHcCCcHHH-------HHHhccCCC
Confidence 5678888876 467888999887664 356999999999999999999987542211 112345678
Q ss_pred cHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccc--cccCCCcHHHH
Q 048248 117 TPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINV--RDERNRNPLRY 194 (316)
Q Consensus 117 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~--~d~~g~tpLh~ 194 (316)
||||+|+..|+.+++++|++.+++.... +.. ..+ .||||+|+..|+.+++++|+..+.+ ++. .|..|.||||+
T Consensus 130 tpL~~Aa~~G~~eiv~~Ll~~gad~~~~-~i~--~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~-~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 130 QAFRLAAENGHLHVLNRLCELAPTEIMA-MIQ--AEN-YHAFRLAAENGHLHVLNRLCELAPT-EATAMIQAENYYAFRW 204 (376)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSCTTTHHH-HHS--HHH-HHHHHHHHHTTCHHHHHHHHHSCGG-GHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhCCCCcccc-ccC--CCC-CCHHHHHHHCCCHHHHHHHHHcCCc-cchhccCCCCCCHHHH
Confidence 9999999999999999999998642110 011 112 7999999999999999999987654 555 88899999999
Q ss_pred HH-HhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChh---
Q 048248 195 AA-ALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHAD--- 270 (316)
Q Consensus 195 A~-~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~--- 270 (316)
|+ ..|+.++++.|++.+ . .|.||||+|+..|+.+++++|++.+.. ++..+ +++++|+..|+.+
T Consensus 205 Aa~~~G~~eiv~~Ll~~g-a-------~~~taL~~Aa~~g~~evv~lL~~~ga~-~~~~~----~~l~~A~~~g~~~vv~ 271 (376)
T 2aja_A 205 AAVGRGHHNVINFLLDCP-V-------MLAYAEIHEFEYGEKYVNPFIARHVNR-LKEMH----DAFKLSNPDGVFDLVT 271 (376)
T ss_dssp HHSTTCCHHHHHHHTTSH-H-------HHHHHHHCTTTTTTTTHHHHHHHHHHH-HHHHH----TTTTTTSSSSCCCCSS
T ss_pred HHHHCCCHHHHHHHHhCC-C-------ccchHHHHHHHCCCHHHHHHHHhcCcc-ccccc----HHHHHHHHCCChhhhc
Confidence 99 999999999999743 2 378999999999999999999987532 33332 3555555555554
Q ss_pred ------------------------HHHHHhcCccccccc--ccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 271 ------------------------VVVFILKQPEVEDLI--NSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 271 ------------------------~~~~Ll~~~~~~~~~--~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
.+++|++.+.....+ ....+.+.||||+|++.|+.++|++|++.+
T Consensus 272 ~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~ 342 (376)
T 2aja_A 272 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 342 (376)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH
T ss_pred HHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh
Confidence 344445433222111 122356789999999999999999998753
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=7.7e-29 Score=191.44 Aligned_cols=150 Identities=21% Similarity=0.228 Sum_probs=131.2
Q ss_pred chHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCC
Q 048248 155 LTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQ 234 (316)
Q Consensus 155 ~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 234 (316)
.||||.|+..|+.++++.|+..+.. ++ .|..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~-~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP-FT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-CC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC-CC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCh
Confidence 4899999999999999999987653 33 58889999999999999999999987654 456788899999999999999
Q ss_pred HhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248 235 LSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL 311 (316)
Q Consensus 235 ~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 311 (316)
.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|
T Consensus 80 ~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 80 ANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYGA---DVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 99999999875 4468899999999999999999999999998864 3677889999999999999999999987
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=4.6e-29 Score=194.41 Aligned_cols=158 Identities=19% Similarity=0.222 Sum_probs=141.3
Q ss_pred CCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHH
Q 048248 114 EGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLR 193 (316)
Q Consensus 114 ~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 193 (316)
...||||.|+..++.++++.|++.+.++ +..+..|.||||+|+. |+.++++.|+..+. +++.+|..|.||||
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~ 75 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV------NAQNGFGRTALQVMKL-GNPEIARRLLLRGA-NPDLKDRTGFAVIH 75 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT------TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc------cccCccCccHHHHHHc-CcHHHHHHHHHcCC-CCCCCCCCCCCHHH
Confidence 4568999999999999999999877654 3356689999999999 99999999998764 58899999999999
Q ss_pred HHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHH
Q 048248 194 YAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVV 273 (316)
Q Consensus 194 ~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~ 273 (316)
+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+...++.+|..|+||||+|+..|+.++++
T Consensus 76 ~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 76 DAARAGFLDTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp HHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 999999999999999765 5567789999999999999999999999999988767899999999999999999999999
Q ss_pred HHhcCcc
Q 048248 274 FILKQPE 280 (316)
Q Consensus 274 ~Ll~~~~ 280 (316)
+|++.|.
T Consensus 155 ~Ll~~GA 161 (162)
T 1ihb_A 155 LMQANGA 161 (162)
T ss_dssp HHHHTC-
T ss_pred HHHHhCC
Confidence 9998764
No 71
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=7.5e-32 Score=222.35 Aligned_cols=189 Identities=15% Similarity=0.164 Sum_probs=159.6
Q ss_pred ccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCC
Q 048248 110 KRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNR 189 (316)
Q Consensus 110 ~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~ 189 (316)
..+.+|.||||+|+..|+.++++.|+..+.++ +..+..|.||||+|+..|+.++++.|+..+ .+++.+|..|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~------~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-a~~n~~d~~g~ 88 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDP------SQPNEEGITALHNAICGANYSIVDFLITAG-ANVNSPDSHGW 88 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCC
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCC
Confidence 45778889999999999999999999987654 335678999999999999999999999875 45899999999
Q ss_pred cHHHHHHHhCcHHHHHHhhcCCCCcccccC-CCCCcHHHHH--HhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248 190 NPLRYAAALGHFKIACRLSDEDDSLVYQHD-CNGQSPLHLA--SQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN 266 (316)
Q Consensus 190 tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 266 (316)
||||+|+..|+.++++.|++.+... +.++ ..|+||||+| +..|+.+++++|++.+. +++..|..|.||+|.++..
T Consensus 89 tpLh~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga-~~~~~~~~~~~~l~~~~~~ 166 (229)
T 2vge_A 89 TPLHCAASCNDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLADVEQ-SMGLMNSGAVYALWDYSAE 166 (229)
T ss_dssp CHHHHHHHTTCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH-HTTTSGGGEEEESSCBCCS
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC-CcccccCCchHHHHHHhhc
Confidence 9999999999999999999776554 4454 6999999999 99999999999998865 4688899999999966555
Q ss_pred CChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248 267 GHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL 311 (316)
Q Consensus 267 g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 311 (316)
+.. ++|++.+.. ..++.+|.+|+||||+|++.|+.++|+.+
T Consensus 167 ~~~---~~ll~~ga~-~~~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 167 FGD---ELSFREGES-VTVLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp STT---BCCBCTTCE-EEEEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred ccc---ccCcccccc-ccccccCCCcccHHHHHHHcCCcceeehh
Confidence 433 466666543 23678899999999999999999988754
No 72
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=4.7e-28 Score=189.74 Aligned_cols=158 Identities=20% Similarity=0.148 Sum_probs=141.1
Q ss_pred CCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHH
Q 048248 114 EGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLR 193 (316)
Q Consensus 114 ~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh 193 (316)
.|.||||.|+..|+.++++.|++.+... +..+..|.||||+|+..|+.++++.|+..+ ..++.+|..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI------NHTDEEGFTPLMWAAAHGQIAVVEFLLQNG-ADPQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc------CCCCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCcHHH
Confidence 5789999999999999999999987553 345668999999999999999999999875 458899999999999
Q ss_pred HHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHH
Q 048248 194 YAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVV 273 (316)
Q Consensus 194 ~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~ 273 (316)
+|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.++++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~ 152 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGV-DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-DPTIETDSGYNSMDLAVALGYRSVQQ 152 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 9999999999999997654 456789999999999999999999999998754 56889999999999999999999999
Q ss_pred HHhcCcc
Q 048248 274 FILKQPE 280 (316)
Q Consensus 274 ~Ll~~~~ 280 (316)
+|++...
T Consensus 153 ~L~~~~~ 159 (167)
T 3v31_A 153 VIESHLL 159 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998753
No 73
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=9e-31 Score=215.88 Aligned_cols=202 Identities=18% Similarity=0.162 Sum_probs=147.2
Q ss_pred HHHHHhcCCc--cccccCCCChHHHHHHHhCCHHHHHHHHhcCCCccccCCCCCCcHHHHHHHhCChhHHHHhhccCCCC
Q 048248 21 REFARLNGNR--ILGTSQNGDTALHIAARFGHEILVMEILKHQSDLVSVPNHKSETPMHVAARAGNFGAAQIFMRPHGNG 98 (316)
Q Consensus 21 ~~ll~~~~~~--~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~tpLh~A~~~g~~~~~~~l~~~~~~~ 98 (316)
+.++..+... .+..+..|.||||+|+..|+.++|++|++.+.+ ++..|..|+||||+|+..|+.+++++|++.+.+
T Consensus 2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~- 79 (229)
T 2vge_A 2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-PSQPNEEGITALHNAICGANYSIVDFLITAGAN- 79 (229)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-
T ss_pred eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-
Confidence 4555554332 234566788999999999999999999998876 456788999999999999999999999987544
Q ss_pred CCCCcchhhhhccCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHH--HHhCcHHHHHHHHHh
Q 048248 99 NNTGTFDDILRKRDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSA--IIKSQFVVMAKILEA 176 (316)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A--~~~~~~~~~~~ll~~ 176 (316)
++..|..|+||||+|+..++.++++.|++.++++... .+..|.||||+| +..|+.++++.|+..
T Consensus 80 ---------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~-----~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ 145 (229)
T 2vge_A 80 ---------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT-----TLSDGATAFEKCDPYREGYADCATYLADV 145 (229)
T ss_dssp ---------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC-----CSSTTCCTGGGCCTTSTTHHHHHHHHHHH
T ss_pred ---------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-----cCCCCCCHHHHHHHHhcChHHHHHHHHHc
Confidence 3446788999999999999999999999887665321 124788999998 888888888888877
Q ss_pred ccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCc-ccccCCCCCcHHHHHHhcCCHhHHHHHH
Q 048248 177 KRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSL-VYQHDCNGQSPLHLASQNGQLSILENLL 242 (316)
Q Consensus 177 ~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~-~~~~d~~g~tpLh~A~~~g~~~iv~~Ll 242 (316)
+. +++.+|..|.||++.++.... .+.|+..+... ++.+|..|+||||+|+..|+.++|+.++
T Consensus 146 ga-~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 146 EQ-SMGLMNSGAVYALWDYSAEFG---DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp HH-HTTTSGGGEEEESSCBCCSST---TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred CC-CcccccCCchHHHHHHhhccc---cccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 64 478888888888886554332 23444443321 4567778888888888888888876533
No 74
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=1.1e-27 Score=188.12 Aligned_cols=159 Identities=24% Similarity=0.351 Sum_probs=140.2
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcH
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNP 191 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tp 191 (316)
...+.+||+.|++.|+.++++.|++.+.++ +..+..|.||||+|+..|+.++++.|++.+. .++.+|..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~ 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV------NAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-DVNAVDHAGMTP 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCH
Confidence 456778999999999999999999987654 2356688999999999999999999998764 588999999999
Q ss_pred HHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhH
Q 048248 192 LRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADV 271 (316)
Q Consensus 192 Lh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~ 271 (316)
||+|+..|+.++++.|++.+. +++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA-DVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHhCCHHH
Confidence 999999999999999997654 456789999999999999999999999998764 468899999999999999999999
Q ss_pred HHHHhcCc
Q 048248 272 VVFILKQP 279 (316)
Q Consensus 272 ~~~Ll~~~ 279 (316)
+++|++.|
T Consensus 162 ~~~L~~~G 169 (169)
T 2y1l_E 162 AEILQKLN 169 (169)
T ss_dssp HHHHHTC-
T ss_pred HHHHHHcC
Confidence 99999763
No 75
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=1.1e-27 Score=184.99 Aligned_cols=151 Identities=19% Similarity=0.208 Sum_probs=135.1
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHH
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRY 194 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 194 (316)
..||||.|+..|+.++++.|++.+.... .+..|.||||+|+..|+.++++.|+..+. .++.+|..|+||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-------TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-SRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-------CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-CTTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCCCHHHH
Confidence 3589999999999999999999886542 35578999999999999999999997654 578999999999999
Q ss_pred HHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHH
Q 048248 195 AAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVF 274 (316)
Q Consensus 195 A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 274 (316)
|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++
T Consensus 74 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 74 AASEGHANIVEVLLKHG-ADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp HHHHTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHcChHHHHHHHHHcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999764 556778999999999999999999999999875 4578999999999999999999999998
Q ss_pred H
Q 048248 275 I 275 (316)
Q Consensus 275 L 275 (316)
|
T Consensus 152 L 152 (153)
T 1awc_B 152 L 152 (153)
T ss_dssp H
T ss_pred h
Confidence 6
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=7.3e-28 Score=186.42 Aligned_cols=154 Identities=21% Similarity=0.252 Sum_probs=136.3
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHH
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRY 194 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 194 (316)
+.||||.|+..|+.++++.|+...... ....+..|.||||+ +..|+.++++.|++.+. +++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~-----~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH-----PDALNRFGKTALQV-MMFGSTAIALELLKQGA-SPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC-----TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC-----ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-CCCCcCCCCCCHHHH
Confidence 468999999999999999999872211 23456679999999 99999999999998764 589999999999999
Q ss_pred HHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHH
Q 048248 195 AAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVF 274 (316)
Q Consensus 195 A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ 274 (316)
|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++. .+++.+|..|.||||+|+..|+.+++++
T Consensus 75 A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~~~~~v~~ 151 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHG-ADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQRGAQDLVDI 151 (156)
T ss_dssp HHHTTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHSCCHHHHHH
T ss_pred HHHcCcHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 99999999999999866 55677899999999999999999999999987 5678999999999999999999999999
Q ss_pred HhcC
Q 048248 275 ILKQ 278 (316)
Q Consensus 275 Ll~~ 278 (316)
|+++
T Consensus 152 Ll~~ 155 (156)
T 1bd8_A 152 LQGH 155 (156)
T ss_dssp HHTT
T ss_pred HHhh
Confidence 9864
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=7.3e-28 Score=188.27 Aligned_cols=161 Identities=20% Similarity=0.219 Sum_probs=138.5
Q ss_pred cCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCc
Q 048248 111 RDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRN 190 (316)
Q Consensus 111 ~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~t 190 (316)
.+.+|.||||.|+..++.++++.|+...+.. ....+..|.||||+|+..|+.++++.|++.+. +++.+|..|+|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVN-----CRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGA-DVHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTT-----CCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCC-----ccccccCCCCHHHHHHHcChHHHHHHHHhcCC-CCCccCCCCCC
Confidence 3677899999999999999999999865432 23345578899999999999999999998764 58999999999
Q ss_pred HHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChh
Q 048248 191 PLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHAD 270 (316)
Q Consensus 191 pLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 270 (316)
|||+|+..|+.++++.|++.+. +++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+. |+.+
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~-~~~~ 154 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGA-VVNVADLWKFTPLHEAAAKGKYEICKLLLQHG-ADPTKKNRDGNTPLDLVKD-GDTD 154 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCTGGGSCT-TCHH
T ss_pred HHHHHHHcCcHHHHHHHHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCChhHhHhc-CChH
Confidence 9999999999999999997654 45678999999999999999999999999875 4578999999999999777 9999
Q ss_pred HHHHHhcCcc
Q 048248 271 VVVFILKQPE 280 (316)
Q Consensus 271 ~~~~Ll~~~~ 280 (316)
++++|++.+.
T Consensus 155 i~~~L~~~gA 164 (165)
T 3twr_A 155 IQDLLRGDAA 164 (165)
T ss_dssp HHHHHHTC--
T ss_pred HHHHHhhccc
Confidence 9999998753
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=6.2e-29 Score=206.37 Aligned_cols=182 Identities=17% Similarity=0.173 Sum_probs=127.1
Q ss_pred CCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHH
Q 048248 113 EEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPL 192 (316)
Q Consensus 113 ~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 192 (316)
..|.||||.|++.+..+.++.|+..+.++. .++.+.||||.|+..|+.++++.|+..+. +++.+|..|.|||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~-------~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L 74 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVK-------FNPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITAL 74 (239)
T ss_dssp -----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcc-------cCchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence 468999999999999999999999887653 13467899999999999999999997765 5899999999999
Q ss_pred HHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCC-cHHHHH--HHcCCh
Q 048248 193 RYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNR-NILHLA--AQNGHA 269 (316)
Q Consensus 193 h~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~A--~~~g~~ 269 (316)
|+|+..|+.++++.|+..+ .+++.+|..|+||||+|+..|+.+++++|++.+. +++.++..|. ||||+| +..|+.
T Consensus 75 ~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA-AVFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CcceecCCCCcchHHHHHHhhhccH
Confidence 9999999999999999764 5567889999999999999999999999998765 4688887776 999999 788999
Q ss_pred hHHHHHhcCccccccc------ccCCCCCCcHHHHHHHcCC
Q 048248 270 DVVVFILKQPEVEDLI------NSSDVDGNTPLHLAAINNH 304 (316)
Q Consensus 270 ~~~~~Ll~~~~~~~~~------~~~d~~g~t~L~~A~~~~~ 304 (316)
+++++|++.+...... ...+..+.+|+++|...|.
T Consensus 153 ~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp CHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9999999876433222 2337789999998888776
No 79
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=3.4e-27 Score=187.01 Aligned_cols=161 Identities=17% Similarity=0.155 Sum_probs=140.7
Q ss_pred CCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHH
Q 048248 113 EEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPL 192 (316)
Q Consensus 113 ~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 192 (316)
.++.+|||.|+..++.++++.|+..++... +..+..|.||||+|+..|+.++++.|+..+. +++.+|..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-----~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDL-----NQGDDHGFSPLHWACREGRSAVVEMLIMRGA-RINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCT-----TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccc-----cccCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence 467899999999999999999999865432 3456689999999999999999999998764 5899999999999
Q ss_pred HHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHH
Q 048248 193 RYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVV 272 (316)
Q Consensus 193 h~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~ 272 (316)
|+|+..|+.++++.|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..++.+++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~tpl~~A~~~~~~~~~ 154 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYK-ADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA-LVSICNKYGEMPVDKAKAPLRELLR 154 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CSSBCCTTSCCGGGGSCHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-CcchhccCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999775 4567789999999999999999999999998764 5799999999999999999999999
Q ss_pred HHHhcCccc
Q 048248 273 VFILKQPEV 281 (316)
Q Consensus 273 ~~Ll~~~~~ 281 (316)
++|++.+..
T Consensus 155 ~~L~~~g~~ 163 (179)
T 3f6q_A 155 ERAEKMGQN 163 (179)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhhcC
Confidence 999998754
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=2.3e-27 Score=179.48 Aligned_cols=132 Identities=21% Similarity=0.224 Sum_probs=115.6
Q ss_pred ccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccC-CC
Q 048248 179 DLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNK-NR 257 (316)
Q Consensus 179 ~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~-g~ 257 (316)
..++..|..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+. |+.+++++|++.+.. ++.+|.. |+
T Consensus 3 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-~~~~~~~~g~ 79 (136)
T 1d9s_A 3 PGIHMLGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAE-PNCADPATLT 79 (136)
T ss_dssp CCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC-SSCCBTTTTB
T ss_pred CCccCCCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC-CCCcCCCCCC
Confidence 357888999999999999999999999999775 4566788999999999999 999999999987654 6888988 99
Q ss_pred cHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 258 NILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 258 tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
||||+|+..|+.+++++|++.+. .++.+|..|+||||+|++.++.+++++|+++++
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 80 RPVHDAAREGFLDTLVVLHRAGA---RLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTCC---CCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCC---CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999998764 367888999999999999999999999998764
No 81
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=1e-27 Score=198.98 Aligned_cols=156 Identities=15% Similarity=0.066 Sum_probs=111.2
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN 232 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~ 232 (316)
.|.||||.|+..++.+.++.|+..+.+ ++. +..|.||||+|+..|+.++++.|+..+. +++.+|..|+||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~-~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMR-VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-SCCCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCC-ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHc
Confidence 578999999999999999999987653 554 4789999999999999999999997766 6678899999999999999
Q ss_pred CCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCC-cHHHHH--HHcCChhHHH
Q 048248 233 GQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGN-TPLHLA--AINNHFNIIL 309 (316)
Q Consensus 233 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~-t~L~~A--~~~~~~~~~~ 309 (316)
|+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++..|..|. ||||+| +..|+.++++
T Consensus 81 g~~~~v~~Ll~~g-a~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~~~~t~l~~a~~~~~g~~~~~~ 156 (239)
T 1ycs_B 81 GHTEIVKFLVQFG-VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA---AVFAMTYSDMQTAADKCEEMEEGYTQCSQ 156 (239)
T ss_dssp TCHHHHHHHHHHT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCSSSCCCHHHHCCSSSTTCCCHHH
T ss_pred CCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CcceecCCCCcchHHHHHHhhhccHHHHH
Confidence 9999999999885 4579999999999999999999999999999864 3567777776 999999 8899999999
Q ss_pred HHhhcC
Q 048248 310 VLARNM 315 (316)
Q Consensus 310 ~Ll~~~ 315 (316)
+|++.+
T Consensus 157 ~Ll~~~ 162 (239)
T 1ycs_B 157 FLYGVQ 162 (239)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 999864
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=8.7e-27 Score=185.58 Aligned_cols=153 Identities=11% Similarity=0.041 Sum_probs=121.9
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccccc-cCCCcHHHHHHHhCcH----HHHHHhhcCCCCcccccCCCCCcHHHH
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINVRD-ERNRNPLRYAAALGHF----KIACRLSDEDDSLVYQHDCNGQSPLHL 228 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~~g~~----~~~~~ll~~~~~~~~~~d~~g~tpLh~ 228 (316)
++++|+.|+..|+.+.++.++... ++.++ ..|+||||+|+..|+. ++++.|++. +++++.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Confidence 457899999999999888887654 34455 7799999999988864 477777765 45667788999999999
Q ss_pred HHhcCC------HhHHHHHHhhCCCCccccccCCC-cHHHHHHHcCC-----hhHHHHHhc-CcccccccccCCCCCCcH
Q 048248 229 ASQNGQ------LSILENLLHSYPDSIEFIDNKNR-NILHLAAQNGH-----ADVVVFILK-QPEVEDLINSSDVDGNTP 295 (316)
Q Consensus 229 A~~~g~------~~iv~~Ll~~~~~~~~~~d~~g~-tpLh~A~~~g~-----~~~~~~Ll~-~~~~~~~~~~~d~~g~t~ 295 (316)
|+..|+ .+++++|++.+ ++++.+|..|+ ||||+|+..+. .+++++|++ .+. .++.+|..|+||
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~~G-adin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga---d~~~~d~~G~Tp 157 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLEKG-ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL---QLLIKDKWGLTA 157 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTT-CCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC---CTTCCCTTSCCH
T ss_pred HHHcCCcchhhHHHHHHHHHHCC-CCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC---CCcccCCCCCCH
Confidence 998887 57789888775 45788999999 99999998543 468888888 553 477889999999
Q ss_pred HHHHHHcCChhHHHHHhhc
Q 048248 296 LHLAAINNHFNIILVLARN 314 (316)
Q Consensus 296 L~~A~~~~~~~~~~~Ll~~ 314 (316)
||+|++.++.+++++|.+.
T Consensus 158 L~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 158 LEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp HHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 9999999999999988753
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=1.1e-25 Score=174.20 Aligned_cols=143 Identities=20% Similarity=0.174 Sum_probs=110.6
Q ss_pred CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCc-HHHH
Q 048248 150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQS-PLHL 228 (316)
Q Consensus 150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~t-pLh~ 228 (316)
.+..|.||||+|+..|+.++++.|+..+ ..++.+|..|+||||+|+ .|+.++++.|++.+ .+++.+|..|+| |||+
T Consensus 8 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 8 SMEPSADWLATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPVHD 84 (156)
T ss_dssp --CCSTTHHHHHHHHTCHHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHHHH
T ss_pred CCccchHHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHH
Confidence 3456789999999999999999999775 458899999999999985 88999999999764 556778999999 9999
Q ss_pred HHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHH
Q 048248 229 ASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLA 299 (316)
Q Consensus 229 A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A 299 (316)
|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|.||.+-+
T Consensus 85 A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGA-RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG---GTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHHHTCHHHHHHHHHHTC-CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC--------------------
T ss_pred HHHCCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC---CCCccCcCcCcccccC
Confidence 999999999999998854 578999999999999999999999999998864 3677888899987744
No 84
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.9e-25 Score=167.81 Aligned_cols=125 Identities=27% Similarity=0.294 Sum_probs=77.6
Q ss_pred cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHH
Q 048248 186 ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQ 265 (316)
Q Consensus 186 ~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~ 265 (316)
..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+.
T Consensus 12 ~~~~t~l~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 12 SDLGKKLLEAARAGQDDEVRILMANG-ADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHH
T ss_pred ccccHHHHHHHHhCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHH
Confidence 34556666666666666666666543 234455666666666666666666666666553 3346666666666666666
Q ss_pred cCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 266 NGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 266 ~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
.|+.+++++|++.+. .++.+|..|+||||+|++.++.+++++|++.|
T Consensus 90 ~~~~~~v~~Ll~~g~---~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IGHLEIAEVLLKHGA---DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCHHHHHHHHHcCC---CCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 666666666666542 24556666777777777777777777766643
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.92 E-value=8.4e-26 Score=179.86 Aligned_cols=156 Identities=6% Similarity=-0.068 Sum_probs=130.0
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcH----HHHHHHHHhccccccccccCCCc
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQF----VVMAKILEAKRDLINVRDERNRN 190 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~----~~~~~ll~~~~~~~~~~d~~g~t 190 (316)
+.++|+.|++.|+.+.+..++..+..... +..|.||||+|+..++. ++++.||..+ ++++.+|..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~~-------~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G-advn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKE-------SVLKSNILYDVLRNNNDEARYKISMFLINKG-ADIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCHH-------HHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT-CCSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccccc-------ccCCCCHHHHHHHcCCcchHHHHHHHHHHCC-CCCCCCCCCCCc
Confidence 56799999999999999999987643211 23588999999999875 4788888765 568999999999
Q ss_pred HHHHHHHhCc------HHHHHHhhcCCCCcccccCCCCC-cHHHHHHhcC-----CHhHHHHHHhhCCCCccccccCCCc
Q 048248 191 PLRYAAALGH------FKIACRLSDEDDSLVYQHDCNGQ-SPLHLASQNG-----QLSILENLLHSYPDSIEFIDNKNRN 258 (316)
Q Consensus 191 pLh~A~~~g~------~~~~~~ll~~~~~~~~~~d~~g~-tpLh~A~~~g-----~~~iv~~Ll~~~~~~~~~~d~~g~t 258 (316)
|||+|+..++ .++++.|++. +++++.+|..|+ ||||+|+..+ +.+++++|++..+.+++.+|..|+|
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~T 156 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT 156 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCC
Confidence 9999999886 4678778765 556788999999 9999999954 4569999998345668999999999
Q ss_pred HHHHHHHcCChhHHHHHhcCc
Q 048248 259 ILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 259 pLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|||+|+..|+.+++++|.++.
T Consensus 157 pL~~A~~~~~~~~v~~L~~~~ 177 (186)
T 3t8k_A 157 ALEFVKRCQKPIALKMMEDYI 177 (186)
T ss_dssp HHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 999999999999999999764
No 86
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.4e-24 Score=161.37 Aligned_cols=125 Identities=38% Similarity=0.603 Sum_probs=94.8
Q ss_pred CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248 187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN 266 (316)
Q Consensus 187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 266 (316)
+|.||||+|+..|+.++++.|++.+. +++..|..|.||||+|+..|+.+++++|++.+. .++.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCcccCCCCCcHHHHHHHc
Confidence 47778888887777777777776543 345567778888888888888888888887643 3577778888888888888
Q ss_pred CChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 267 GHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 267 g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
|+.+++++|++.+. .++.+|..|+||||+|+..++.+++++|+++++
T Consensus 79 ~~~~~~~~Ll~~g~---~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 79 GHLEVVKLLLEAGA---DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp TCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHcCC---CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 88888888887653 356677788888888888888888888887763
No 87
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.92 E-value=3.2e-25 Score=167.57 Aligned_cols=128 Identities=22% Similarity=0.218 Sum_probs=112.3
Q ss_pred ccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCC-CCcHH
Q 048248 148 AKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCN-GQSPL 226 (316)
Q Consensus 148 ~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~-g~tpL 226 (316)
+..+..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+. |+.++++.|++.+. +++.+|.. |+|||
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~-~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAG-ADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGA-EPNCADPATLTRPV 82 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTC-CSSCCBTTTTBCHH
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcC-CCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCC-CCCCcCCCCCCCHH
Confidence 445668899999999999999999999876 4588899999999999999 99999999997654 45678888 99999
Q ss_pred HHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 227 HLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 227 h~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGA-RLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCC-CCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 99999999999999998764 46889999999999999999999999999765
No 88
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.92 E-value=2.7e-25 Score=172.08 Aligned_cols=129 Identities=21% Similarity=0.209 Sum_probs=113.2
Q ss_pred cccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCc-HH
Q 048248 182 NVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRN-IL 260 (316)
Q Consensus 182 ~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~t-pL 260 (316)
+..+..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+ .|+.+++++|++.+ ..++.+|..|+| ||
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-~~~~~~d~~g~ttpL 82 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMM-MGSARVAELLLLHG-AEPNCADPATLTRPV 82 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTT-CCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-CCCCCCCTTTCCCHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-CCCCCcCCCCCcHHH
Confidence 456788999999999999999999999774 556778999999999985 89999999999875 457999999999 99
Q ss_pred HHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 261 HLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 261 h~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
|+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++++.
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga 135 (156)
T 1bi7_B 83 HDAAREGFLDTLVVLHRAGA---RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG 135 (156)
T ss_dssp HHHHHHTCHHHHHHHHHHTC---CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-
T ss_pred HHHHHCCCHHHHHHHHHcCC---CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCC
Confidence 99999999999999998753 477889999999999999999999999998763
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.92 E-value=1.7e-24 Score=163.59 Aligned_cols=126 Identities=27% Similarity=0.303 Sum_probs=111.6
Q ss_pred CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248 151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS 230 (316)
Q Consensus 151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 230 (316)
...+.||||+|+..|+.++++.|+..+. +++.+|..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 3456799999999999999999998764 58899999999999999999999999999764 456678999999999999
Q ss_pred hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.|
T Consensus 89 ~~~~~~~v~~Ll~~g~-~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLKHGA-DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHHcCC-CCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999998754 46889999999999999999999999999753
No 90
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=8.9e-25 Score=173.74 Aligned_cols=139 Identities=22% Similarity=0.263 Sum_probs=121.5
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccC-CCCCcHHHHHHh
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHD-CNGQSPLHLASQ 231 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~ 231 (316)
.|.||||+|+..|+.++++.|+. +.+++.+|..|+||||+|+..|+.++++.|++.+.. ++.+| ..|+||||+|+.
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~~~~~~~g~tpL~~A~~ 119 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAG 119 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHh
Confidence 56799999999999999999998 456899999999999999999999999999987654 45566 889999999999
Q ss_pred cCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248 232 NGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL 311 (316)
Q Consensus 232 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 311 (316)
.|+.+++++|++.+. +++.+|..|+||||+|+..++. ..+.+||++|+..|+.+++++|
T Consensus 120 ~~~~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~--------------------~~~~~~l~~a~~~~~~~i~~~L 178 (183)
T 3deo_A 120 YVRPEVVEALVELGA-DIEVEDERGLTALELAREILKT--------------------TPKGNPMQFGRRIGLEKVINVL 178 (183)
T ss_dssp TTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHHHT--------------------CCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCC-CCcCCCCCCCCHHHHHHHhccC--------------------cccccHHHHHHHcCHHHHHHHH
Confidence 999999999998864 5789999999999999875321 3478999999999999999999
Q ss_pred hhcC
Q 048248 312 ARNM 315 (316)
Q Consensus 312 l~~~ 315 (316)
.+++
T Consensus 179 ~~~~ 182 (183)
T 3deo_A 179 EGQV 182 (183)
T ss_dssp HTCC
T ss_pred HHhh
Confidence 8764
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.92 E-value=8.3e-25 Score=181.98 Aligned_cols=138 Identities=22% Similarity=0.258 Sum_probs=114.0
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccC-CCCCcHHHHHHh
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHD-CNGQSPLHLASQ 231 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d-~~g~tpLh~A~~ 231 (316)
.|.||||+|+..|+.++++.|+. +.+++.+|..|+||||+|+..|+.++++.|+..+.. ++.++ ..|+||||+|+.
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-LDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-TTCCCSSSCCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-CCcCCCCCCCCHHHHHHH
Confidence 46789999999999999988887 446888899999999999999999999888877554 44455 789999999999
Q ss_pred cCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHH
Q 048248 232 NGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVL 311 (316)
Q Consensus 232 ~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~L 311 (316)
.|+.+++++|++.+ .+++.+|..|+||||+|+..++ ...+.||||+|+..|+.+++++|
T Consensus 121 ~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~--------------------~~~~~~~l~~a~~~g~~~iv~~L 179 (244)
T 3ui2_A 121 YVRPEVVEALVELG-ADIEVEDERGLTALELAREILK--------------------TTPKGNPMQFGRRIGLEKVINVL 179 (244)
T ss_dssp TTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHT--------------------TCCCSSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHh--------------------ccCCCCHHHHHHHcChHHHHHHH
Confidence 99999999999875 4568889999999999986321 24578999999999999999999
Q ss_pred hhc
Q 048248 312 ARN 314 (316)
Q Consensus 312 l~~ 314 (316)
++.
T Consensus 180 ~~~ 182 (244)
T 3ui2_A 180 EGQ 182 (244)
T ss_dssp HHH
T ss_pred HHh
Confidence 864
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=2.5e-25 Score=168.33 Aligned_cols=127 Identities=26% Similarity=0.344 Sum_probs=86.5
Q ss_pred ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHH
Q 048248 183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHL 262 (316)
Q Consensus 183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 262 (316)
.+|.+|+||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~ 82 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-LVNTTGYQNDSPLHD 82 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCGGGCCHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-cccCcCCCCCCHHHH
Confidence 45667777777777777777777777654 3445567777777777777777777777776543 356677777777777
Q ss_pred HHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhc
Q 048248 263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARN 314 (316)
Q Consensus 263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~ 314 (316)
|+..|+.+++++|++.+. .++.+|..|.||||+|+..++.+++++|.++
T Consensus 83 A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 83 AAKNGHVDIVKLLLSYGA---SRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHHTTCHHHHHHHHHTTC---CTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHHcCCHHHHHHHHHcCC---CCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 777777777777776643 3556677777777777777777777666554
No 93
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.91 E-value=1.7e-23 Score=155.41 Aligned_cols=124 Identities=37% Similarity=0.540 Sum_probs=106.6
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN 232 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~ 232 (316)
+|.||||+|+..|+.++++.|+..+. .++.+|..|.||||+|+..++.++++.|++.+. +++.+|..|.||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCC-CCcccCCCCCcHHHHHHHc
Confidence 36799999999999999999888754 478888899999999999999999998887654 4566888999999999999
Q ss_pred CCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCc
Q 048248 233 GQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQP 279 (316)
Q Consensus 233 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~ 279 (316)
|+.+++++|++.+. .++.+|..|.||||+|+..|+.+++++|++.+
T Consensus 79 ~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 124 (126)
T 1n0r_A 79 GHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124 (126)
T ss_dssp TCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcC
Confidence 99999999998754 46888999999999999999999999999765
No 94
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2.2e-24 Score=176.82 Aligned_cols=131 Identities=18% Similarity=0.185 Sum_probs=98.6
Q ss_pred CCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHH
Q 048248 151 GPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLAS 230 (316)
Q Consensus 151 ~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 230 (316)
+..|.||||+|+..|+.++++.|+..+. +++.+|..|+||||+|+..|+.++++.|+...+.+++.+|..|+||||+|+
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRV-GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 4456788888888888888888887654 477888888888888888888888888887766677778888888888888
Q ss_pred hcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCccccc
Q 048248 231 QNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVED 283 (316)
Q Consensus 231 ~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~ 283 (316)
..|+.+++++|++.+. +++.+|..|+||||+|+..|+.++++.|+..+....
T Consensus 149 ~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~ 200 (222)
T 3ehr_A 149 WKGYADIVQLLLAKGA-RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200 (222)
T ss_dssp HHTCHHHHHHHHHHTC-CSCCCCTTSCCHHHHCCSHHHHHHHC----------
T ss_pred HcCCHHHHHHHHHcCC-CCccccCCCCCHHHHhcchhHHHHHHHHhccchhhh
Confidence 8888888888888754 467888888888888888888888888887765443
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=1.3e-23 Score=179.90 Aligned_cols=140 Identities=14% Similarity=0.163 Sum_probs=116.0
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhccccccc------cccCCCcHHHHHHHh---CcHHHHHHhhcCCCCcccccCCCCCc
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDLINV------RDERNRNPLRYAAAL---GHFKIACRLSDEDDSLVYQHDCNGQS 224 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~------~d~~g~tpLh~A~~~---g~~~~~~~ll~~~~~~~~~~d~~g~t 224 (316)
..++|+.|+..|+.+.++.|+..+.+ ++. .+..|.||||+|+.. |+.++++.|+..+. +++.+|..|+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d-~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga-dvn~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC-TTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS-CTTCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc-ccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC-CCCCCCCCCCC
Confidence 45789999999999999999976654 565 688999999999997 88999999998754 56778999999
Q ss_pred HHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCC
Q 048248 225 PLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNH 304 (316)
Q Consensus 225 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~ 304 (316)
|||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|++.+.. .|.||||+|+..|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC-------
T ss_pred HHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCC
Confidence 999999999999999999875 45799999999999999999999999999987532 58999999999887
Q ss_pred h
Q 048248 305 F 305 (316)
Q Consensus 305 ~ 305 (316)
.
T Consensus 299 ~ 299 (301)
T 2b0o_E 299 S 299 (301)
T ss_dssp -
T ss_pred c
Confidence 4
No 96
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=9.3e-24 Score=173.03 Aligned_cols=129 Identities=21% Similarity=0.211 Sum_probs=96.7
Q ss_pred ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHH
Q 048248 183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHL 262 (316)
Q Consensus 183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 262 (316)
..+..|.||||+|+..|+.++++.|+..+ .+++.+|..|+||||+|+..|+.++|++|++..+..++.+|..|+||||+
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDNR-VGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred ccccccccccccccccCcHHHHHHHHhCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 34667888888888888888888888654 44566778888888888888888888888876556677888888888888
Q ss_pred HHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
|+..|+.+++++|++.+. .++.+|..|+||||+|+..++.++++.|++.+
T Consensus 147 A~~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~ 196 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGA---RTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196 (222)
T ss_dssp HHHHTCHHHHHHHHHHTC---CSCCCCTTSCCHHHHCCSHHHHHHHC------
T ss_pred HHHcCCHHHHHHHHHcCC---CCccccCCCCCHHHHhcchhHHHHHHHHhccc
Confidence 888888888888887753 35677888888888888888888888877654
No 97
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.89 E-value=1.3e-23 Score=155.78 Aligned_cols=111 Identities=24% Similarity=0.252 Sum_probs=69.5
Q ss_pred ccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHH
Q 048248 185 DERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAA 264 (316)
Q Consensus 185 d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~ 264 (316)
++.|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~ 81 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAV 81 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHH
Confidence 3456666666666666666666665443 34456666677777777777777777666554 335666666777777777
Q ss_pred HcCChhHHHHHhcCcccccccccCCCCCCcHHHHHH
Q 048248 265 QNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAA 300 (316)
Q Consensus 265 ~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 300 (316)
..|+.+++++|++.+. .++.+|.+|+||||+|.
T Consensus 82 ~~~~~~~v~~Ll~~ga---~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 82 YEGHVSCVKLLLSKGA---DKTVKGPDGLTAFEATD 114 (123)
T ss_dssp HHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHCC
T ss_pred HcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHhC
Confidence 7777777777776643 24556666777777763
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.89 E-value=1.1e-23 Score=159.18 Aligned_cols=126 Identities=25% Similarity=0.299 Sum_probs=104.9
Q ss_pred CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248 150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA 229 (316)
Q Consensus 150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 229 (316)
.+..|.||||+|+..|+.++++.|+..+. +++.+|..|.||||+|+..|+.++++.|++.+. +++.+|..|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGS-DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-LVNTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-cccCcCCCCCCHHHHH
Confidence 45678899999999999999998887654 578889999999999999999999998887644 5567888999999999
Q ss_pred HhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcC
Q 048248 230 SQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQ 278 (316)
Q Consensus 230 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~ 278 (316)
+..|+.+++++|++.+ .+++.+|..|.||||+|+..+..+++.+|.+.
T Consensus 84 ~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~ 131 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYG-ASRNAVNIFGLRPVDYTDDESMKSLLLLPEKN 131 (137)
T ss_dssp HHTTCHHHHHHHHHTT-CCTTCCCTTSCCGGGGCCCHHHHHHHSCC---
T ss_pred HHcCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHHhhccHHHHHhhcccc
Confidence 9999999999999775 45688999999999999988888887766644
No 99
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=1.2e-22 Score=172.02 Aligned_cols=193 Identities=16% Similarity=0.156 Sum_probs=133.2
Q ss_pred cCCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCc
Q 048248 111 RDEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRN 190 (316)
Q Consensus 111 ~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~t 190 (316)
.|..+.++++.+...|+.....++...-+.... ..+. .+.... ....+-..+++...........+....+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~----~kP~-~~s~~~----~~~~fI~aKYl~~~f~~~~~~~~~~~l~ 132 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDP----VKPN-PGSDMI----ARKDYITAKYMERRYARKKHADTAAKLH 132 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSC----CSCC-TTCCHH----HHHHHHHHHHTTCTTSCCCSSSHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhc----CCCC-CCCCHH----HHHHHHHHHHHHhhcccccccccchhhh
Confidence 467788899999888887665554433222110 0000 011111 1111222223332222222333344567
Q ss_pred HHHHHHHhCcHHHHHHhhcCCCCc-----ccccCCCCCcHHHHHHhc---CCHhHHHHHHhhCCCCccccccCCCcHHHH
Q 048248 191 PLRYAAALGHFKIACRLSDEDDSL-----VYQHDCNGQSPLHLASQN---GQLSILENLLHSYPDSIEFIDNKNRNILHL 262 (316)
Q Consensus 191 pLh~A~~~g~~~~~~~ll~~~~~~-----~~~~d~~g~tpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 262 (316)
+|+.|++.|+.+.+..++..+... .+..|..|+||||+|+.. |+.+++++|++.+. +++.+|..|+||||+
T Consensus 133 ~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga-~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 133 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG-NLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-CTTCCCTTCCCHHHH
T ss_pred hhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC-CccccCCCCCCHHHH
Confidence 899999999988888888776553 233477899999999998 88999999998854 478889999999999
Q ss_pred HHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
|+..|+.+++++|++.+. .++.+|.+|.||||+|+..|+.+++++|+++++
T Consensus 212 A~~~g~~~~v~~Ll~~ga---d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 212 CCLTDNAECLKLLLRGKA---SIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHcCCHHHHHHHHHcCC---CCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999998764 467888999999999999999999999988653
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=1.5e-23 Score=166.58 Aligned_cols=124 Identities=21% Similarity=0.119 Sum_probs=108.3
Q ss_pred cccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccc-cCCCcHHHH
Q 048248 184 RDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFID-NKNRNILHL 262 (316)
Q Consensus 184 ~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d-~~g~tpLh~ 262 (316)
.+.+|.||||+|+..|+.++++.|+. +.+++.+|..|+||||+|+..|+.+++++|++.+. +++.++ ..|+||||+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~~g~tpL~~ 116 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLTALHM 116 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCcCCCCCCCCHHHH
Confidence 35689999999999999999999998 56778899999999999999999999999998764 467787 889999999
Q ss_pred HHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhh
Q 048248 263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLAR 313 (316)
Q Consensus 263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~ 313 (316)
|+..|+.+++++|++.+. .++.+|.+|+||||+|++.++....+.+++
T Consensus 117 A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~ 164 (183)
T 3deo_A 117 AAGYVRPEVVEALVELGA---DIEVEDERGLTALELAREILKTTPKGNPMQ 164 (183)
T ss_dssp HHHTTCHHHHHHHHHHTC---CTTCCCTTSCCHHHHHHHHHHTCCCCSHHH
T ss_pred HHhcCcHHHHHHHHHcCC---CCcCCCCCCCCHHHHHHHhccCcccccHHH
Confidence 999999999999998763 467889999999999999877665554443
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=6.1e-23 Score=170.67 Aligned_cols=140 Identities=20% Similarity=0.155 Sum_probs=120.4
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHhCcHHHHHHHHHhccccccccc-cCCCc
Q 048248 112 DEEGNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRD-ERNRN 190 (316)
Q Consensus 112 ~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d-~~g~t 190 (316)
+.+|.||||+|++.++.++++.|+. +.++ +..+..|.||||+|+..|+.++++.|+..+. +++.++ ..|.|
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~------~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-~~~~~~~~~g~t 113 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDV------DAVDENGRTALLFVAGLGSDKCVRLLAEAGA-DLDHRDMRGGLT 113 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCT------TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-CTTCCCSSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCC------CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-CCCcCCCCCCCC
Confidence 4678999999999999999999998 5433 3356689999999999999999999998764 578887 78999
Q ss_pred HHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChh
Q 048248 191 PLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHAD 270 (316)
Q Consensus 191 pLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~ 270 (316)
|||+|+..|+.++++.|+..+ .+++.+|..|+||||+|+..++ ...+.||||+|+..|+.+
T Consensus 114 ~L~~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 114 ALHMAAGYVRPEVVEALVELG-ADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp HHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHH
Confidence 999999999999999999774 5567899999999999986221 246899999999999999
Q ss_pred HHHHHhcC
Q 048248 271 VVVFILKQ 278 (316)
Q Consensus 271 ~~~~Ll~~ 278 (316)
++++|++.
T Consensus 175 iv~~L~~~ 182 (244)
T 3ui2_A 175 VINVLEGQ 182 (244)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999974
No 102
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=9.2e-23 Score=174.63 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=117.2
Q ss_pred CCcHHHHHHhcCChhHHHHHHhhCCCcccccccccCCCCCchHHHHHHHh---CcHHHHHHHHHhccccccccccCCCcH
Q 048248 115 GNTPLHNAVRKCDGKMAFTMIKKDPEPIRYNNKAKQGPNNLTLLHSAIIK---SQFVVMAKILEAKRDLINVRDERNRNP 191 (316)
Q Consensus 115 g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~t~lh~A~~~---~~~~~~~~ll~~~~~~~~~~d~~g~tp 191 (316)
+.++|+.|+..++.+.+..++..+.++.........+..|.||||+|+.. ++.+++++||..+. +++.+|..|+||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga-dvn~~d~~G~Tp 229 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKAADGNTA 229 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS-CTTCCCTTCCCH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC-CCCCCCCCCCCH
Confidence 44679999999999999999998876533211112466889999999987 89999999998864 589999999999
Q ss_pred HHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCCh
Q 048248 192 LRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHA 269 (316)
Q Consensus 192 Lh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~ 269 (316)
||+|+..|+.++++.|++. +++++.+|.+|.||||+|+..|+.+++++|++.+.. .|.||||+|+.+|+.
T Consensus 230 Lh~A~~~g~~~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLKG-RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHHHTTCHHHHHHHHHT-TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC--------
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCCc
Confidence 9999999999999999986 456678999999999999999999999999986532 689999999998874
No 103
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=8.5e-23 Score=151.42 Aligned_cols=113 Identities=18% Similarity=0.128 Sum_probs=98.4
Q ss_pred CCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhc
Q 048248 153 NNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQN 232 (316)
Q Consensus 153 ~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~ 232 (316)
.|.||||+|+..|+.++++.|+..+. .++.+|..|+||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHc
Confidence 56799999999999999999998765 58899999999999999999999999999765 45677899999999999999
Q ss_pred CCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCC
Q 048248 233 GQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGH 268 (316)
Q Consensus 233 g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~ 268 (316)
|+.+++++|++.+. +++.+|..|+||||+|...+.
T Consensus 84 ~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 84 GHVSCVKLLLSKGA-DKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp TCHHHHHHHHHTTC-CTTCCCTTSCCHHHHCCCHHH
T ss_pred CCHHHHHHHHHcCC-CCCCcCCCCCCHHHHhCCHHH
Confidence 99999999998754 478999999999999954433
No 104
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=9.7e-22 Score=138.20 Aligned_cols=92 Identities=41% Similarity=0.681 Sum_probs=70.6
Q ss_pred CCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHH
Q 048248 221 NGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAA 300 (316)
Q Consensus 221 ~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 300 (316)
+|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..|+.+++++|++.+. .++.+|.+|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~-~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA---DVNAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CCCccCCCCCCHHHHHH
Confidence 47788888888888888888887653 467788888888888888888888888887753 35677778888888888
Q ss_pred HcCChhHHHHHhhcCC
Q 048248 301 INNHFNIILVLARNMS 316 (316)
Q Consensus 301 ~~~~~~~~~~Ll~~~~ 316 (316)
+.|+.+++++|+++++
T Consensus 77 ~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HTTCHHHHHHHHHTTC
T ss_pred HcCCHHHHHHHHHcCC
Confidence 8888888888887763
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=1.7e-21 Score=164.85 Aligned_cols=125 Identities=18% Similarity=0.206 Sum_probs=109.5
Q ss_pred CchHHHHHHHhCcHHHHHHHHHhcccc-----ccccccCCCcHHHHHHHh---CcHHHHHHhhcCCCCcccccCCCCCcH
Q 048248 154 NLTLLHSAIIKSQFVVMAKILEAKRDL-----INVRDERNRNPLRYAAAL---GHFKIACRLSDEDDSLVYQHDCNGQSP 225 (316)
Q Consensus 154 ~~t~lh~A~~~~~~~~~~~ll~~~~~~-----~~~~d~~g~tpLh~A~~~---g~~~~~~~ll~~~~~~~~~~d~~g~tp 225 (316)
..++|+.|+..|+.+.+..++..+.+. ++..|..|+||||+|+.. |+.++++.|++.+ .+++.+|..|+||
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g-a~in~~d~~g~Tp 208 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS-GNLDKQTGKGSTA 208 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC-SCTTCCCTTCCCH
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC-CCccccCCCCCCH
Confidence 357999999999999999988876542 344588999999999999 8899999999775 4567789999999
Q ss_pred HHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 226 LHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 226 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
||+|+..|+.+++++|++.+ ++++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 209 Lh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 209 LHYCCLTDNAECLKLLLRGK-ASIEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 99999999999999999865 4579999999999999999999999999998764
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.86 E-value=2.1e-21 Score=170.03 Aligned_cols=148 Identities=22% Similarity=0.203 Sum_probs=110.4
Q ss_pred CCchHHHHHHHh-CcHHHHHHHHHhccccccccc--cCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248 153 NNLTLLHSAIIK-SQFVVMAKILEAKRDLINVRD--ERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA 229 (316)
Q Consensus 153 ~~~t~lh~A~~~-~~~~~~~~ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 229 (316)
.+.|+||.|+.. ++.++++.||..+. +++..+ ..|.||||+|+..|+.++++.|+..+ .+++..|..|+||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Ga-dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~TpLh~A 275 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGA-DVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHHA 275 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTC-CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCC-CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHH
Confidence 456899999999 99999999997664 578887 88999999999999999999998774 55677899999999999
Q ss_pred HhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcC
Q 048248 230 SQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINN 303 (316)
Q Consensus 230 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~ 303 (316)
+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.+++++|+..+.........+..+.|+++++....
T Consensus 276 ~~~g~~~~v~~LL~~G-ad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 276 TILGHTGLACLFLKRG-ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHcCcHHHHHHHHHCc-CCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 9999999999999875 457899999999999999999999999999765433333345667888888876654
No 107
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=8.9e-21 Score=173.53 Aligned_cols=123 Identities=13% Similarity=0.168 Sum_probs=98.8
Q ss_pred chHHHHHHHhCcHHHHHHHHHhcccccccc------ccCCCcHHHHHHH---hCcHHHHHHhhcCCCCcccccCCCCCcH
Q 048248 155 LTLLHSAIIKSQFVVMAKILEAKRDLINVR------DERNRNPLRYAAA---LGHFKIACRLSDEDDSLVYQHDCNGQSP 225 (316)
Q Consensus 155 ~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~------d~~g~tpLh~A~~---~g~~~~~~~ll~~~~~~~~~~d~~g~tp 225 (316)
.+.||.|+..|+.+.++.||..+. +++.. |..|+||||+|+. .|+.++++.|+..+ ++++.+|..|+||
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~-~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g-a~vn~~d~~g~Tp 210 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQ-DFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG-GHLDAKAADGNTA 210 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTC-CSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS-CCTTCCCSSSCCH
T ss_pred HHHHHHHHhccCHHHHHHHHhhcc-cccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC-CCCCccCCCCCcH
Confidence 367888888888888888887764 35655 7788888888866 78888888888755 4566788888888
Q ss_pred HHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcc
Q 048248 226 LHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPE 280 (316)
Q Consensus 226 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~ 280 (316)
||+|+..|+.++|++|++.+ ++++.+|..|+||||+|+..|+.+++++|++.+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~~g-a~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLKGR-ALVGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHHHTTTTCHHHHHHHHHTC-CCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 88888888888888888765 4468888888888888888888888888888764
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=1.7e-20 Score=131.73 Aligned_cols=91 Identities=38% Similarity=0.605 Sum_probs=68.2
Q ss_pred CCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHc
Q 048248 187 RNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQN 266 (316)
Q Consensus 187 ~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~ 266 (316)
+|+||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. +++.+|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~d~~g~t~l~~A~~~ 78 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAG-ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARN 78 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCccCCCCCCHHHHHHHc
Confidence 4778888888888888777777654 3456677788888888888888888888887654 4577788888888888888
Q ss_pred CChhHHHHHhcCc
Q 048248 267 GHADVVVFILKQP 279 (316)
Q Consensus 267 g~~~~~~~Ll~~~ 279 (316)
|+.+++++|++.+
T Consensus 79 ~~~~~~~~Ll~~g 91 (93)
T 1n0q_A 79 GHLEVVKLLLEAG 91 (93)
T ss_dssp TCHHHHHHHHHTT
T ss_pred CCHHHHHHHHHcC
Confidence 8888888887665
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.83 E-value=1.3e-20 Score=164.97 Aligned_cols=128 Identities=20% Similarity=0.214 Sum_probs=111.7
Q ss_pred ccccCCCcHHHHHHHh-CcHHHHHHhhcCCCCcccccC--CCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcH
Q 048248 183 VRDERNRNPLRYAAAL-GHFKIACRLSDEDDSLVYQHD--CNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNI 259 (316)
Q Consensus 183 ~~d~~g~tpLh~A~~~-g~~~~~~~ll~~~~~~~~~~d--~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tp 259 (316)
..+..+.||||+|+.. |+.++++.|+..+. +++..+ ..|.||||+|+..|+.+++++|++.+ .+++..|..|+||
T Consensus 194 l~~~~~~t~L~~Aa~~~g~~~~v~~LL~~Ga-dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G-advn~~d~~G~Tp 271 (368)
T 3jue_A 194 LGSLHPGALLFRASGHPPSLPTMADALAHGA-DVNWVNGGQDNATPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGP 271 (368)
T ss_dssp ---CCHHHHHHHHTSSSCCHHHHHHHHHTTC-CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCH
T ss_pred cccCCCCcHHHHHHHccCCHHHHHHHHHcCC-CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCCCCCCCCH
Confidence 3444567899999999 99999999997655 455666 78999999999999999999999875 5579999999999
Q ss_pred HHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcC
Q 048248 260 LHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNM 315 (316)
Q Consensus 260 Lh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~ 315 (316)
||+|+..|+.+++++|++.+. .++..|.+|.||||+|+..++.+++++|++.+
T Consensus 272 Lh~A~~~g~~~~v~~LL~~Ga---d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~ 324 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRGA---DLGARDSEGRDPLTIAMETANADIVTLLRLAK 324 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHCcC---CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999864 46788999999999999999999999998653
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.83 E-value=2.3e-20 Score=170.83 Aligned_cols=124 Identities=18% Similarity=0.215 Sum_probs=110.8
Q ss_pred CCcHHHHHHHhCcHHHHHHhhcCCCCccccc------CCCCCcHHHHHHh---cCCHhHHHHHHhhCCCCccccccCCCc
Q 048248 188 NRNPLRYAAALGHFKIACRLSDEDDSLVYQH------DCNGQSPLHLASQ---NGQLSILENLLHSYPDSIEFIDNKNRN 258 (316)
Q Consensus 188 g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~------d~~g~tpLh~A~~---~g~~~iv~~Ll~~~~~~~~~~d~~g~t 258 (316)
..+.||.|+..|+.+.++.|+..+.. ++.. |..|+||||+|+. .|+.++|++|++.+. +++.+|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~-~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga-~vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD-FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG-HLDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC-SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-CTTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc-ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-CCCccCCCCCc
Confidence 34779999999999999999987754 4444 7889999999966 899999999999864 57999999999
Q ss_pred HHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcHHHHHHHcCChhHHHHHhhcCC
Q 048248 259 ILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTPLHLAAINNHFNIILVLARNMS 316 (316)
Q Consensus 259 pLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~~~ 316 (316)
|||+|+..|+.+++++|++.+. .++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga---~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRA---LVGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCC---CCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCC---CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 9999999999999999999874 478889999999999999999999999999864
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=3.9e-20 Score=135.23 Aligned_cols=108 Identities=25% Similarity=0.345 Sum_probs=78.6
Q ss_pred ccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHH
Q 048248 183 VRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHL 262 (316)
Q Consensus 183 ~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~ 262 (316)
.+|.+|+||||+|+..|+.++++.|+..+. +++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||||+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d~~g~tpl~~ 81 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA-DVNARSKDGNTPEHL 81 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTC-CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC-CTTCCCTTCCCTTHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC-CCcccCCCCCCHHHH
Confidence 457778888888888888887777776543 455677778888888888888888888877643 457777788888888
Q ss_pred HHHcCChhHHHHHhcCcccccccccCCCCCCcH
Q 048248 263 AAQNGHADVVVFILKQPEVEDLINSSDVDGNTP 295 (316)
Q Consensus 263 A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~ 295 (316)
|+..|+.+++++|++.+. .++.++..|.||
T Consensus 82 A~~~~~~~~~~~Ll~~ga---~~n~~~~~~~~~ 111 (115)
T 2l6b_A 82 AKKNGHHEIVKLLDAKGA---DVNARSWGSSHH 111 (115)
T ss_dssp HHTTTCHHHHHHHHTTSS---SHHHHSCCCC--
T ss_pred HHHCCCHHHHHHHHHcCC---CCCcCCcccccc
Confidence 888888888888887753 356667777776
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=2.2e-19 Score=131.24 Aligned_cols=108 Identities=24% Similarity=0.253 Sum_probs=92.1
Q ss_pred CCCCCchHHHHHHHhCcHHHHHHHHHhccccccccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHH
Q 048248 150 QGPNNLTLLHSAIIKSQFVVMAKILEAKRDLINVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLA 229 (316)
Q Consensus 150 ~~~~~~t~lh~A~~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A 229 (316)
++..|.||||+|+..|+.++++.|+..+. .++.+|..|.||||+|+..|+.++++.|++.+ .+++.+|..|+||||+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG-ADVNARSKDGNTPEHLA 82 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTC-CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTT-CCTTCCCTTCCCTTHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCcccCCCCCCHHHHH
Confidence 46678999999999999999999887754 58889999999999999999999999998774 45667899999999999
Q ss_pred HhcCCHhHHHHHHhhCCCCccccccCCCcHH
Q 048248 230 SQNGQLSILENLLHSYPDSIEFIDNKNRNIL 260 (316)
Q Consensus 230 ~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpL 260 (316)
+..|+.+++++|++.+ .+++.++..|.+|=
T Consensus 83 ~~~~~~~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp HTTTCHHHHHHHHTTS-SSHHHHSCCCC---
T ss_pred HHCCCHHHHHHHHHcC-CCCCcCCccccccc
Confidence 9999999999999775 55799999998873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=1.2e-18 Score=126.22 Aligned_cols=92 Identities=24% Similarity=0.288 Sum_probs=69.0
Q ss_pred cccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHHHHHHcCChhHHHHHhcCcccccccccCCCCCCcH
Q 048248 216 YQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILHLAAQNGHADVVVFILKQPEVEDLINSSDVDGNTP 295 (316)
Q Consensus 216 ~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~~~~~Ll~~~~~~~~~~~~d~~g~t~ 295 (316)
...|.+|.||||+|+..|+.+++++|++.+ .+++.+|..|+||||+|+..|+.+++++|++.+. .++.+|..|+||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga---~~~~~d~~g~tp 93 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA---DVXAQDKFGKTA 93 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC---CTTCCCTTSCCH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC---CccccccCCCcH
Confidence 446777888888888888888888888764 4467778888888888888888888888887753 356677788888
Q ss_pred HHHHHHcCChhHHHHH
Q 048248 296 LHLAAINNHFNIILVL 311 (316)
Q Consensus 296 L~~A~~~~~~~~~~~L 311 (316)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 8888888888888776
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=4e-18 Score=123.46 Aligned_cols=92 Identities=25% Similarity=0.328 Sum_probs=68.3
Q ss_pred cccccCCCcHHHHHHHhCcHHHHHHhhcCCCCcccccCCCCCcHHHHHHhcCCHhHHHHHHhhCCCCccccccCCCcHHH
Q 048248 182 NVRDERNRNPLRYAAALGHFKIACRLSDEDDSLVYQHDCNGQSPLHLASQNGQLSILENLLHSYPDSIEFIDNKNRNILH 261 (316)
Q Consensus 182 ~~~d~~g~tpLh~A~~~g~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~g~~~iv~~Ll~~~~~~~~~~d~~g~tpLh 261 (316)
...|.+|.||||+|+..|+.++++.|+..+ .+++.+|..|+||||+|+..|+.+++++|++.+ .+++.+|..|+||||
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~g-a~~~~~d~~g~tpl~ 95 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANG-ADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG-ADVXAQDKFGKTAFD 95 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcC-CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccCCCcHHH
Confidence 445677888888888888888887777654 445667778888888888888888888888764 446778888888888
Q ss_pred HHHHcCChhHHHHH
Q 048248 262 LAAQNGHADVVVFI 275 (316)
Q Consensus 262 ~A~~~g~~~~~~~L 275 (316)
+|+..|+.+++++|
T Consensus 96 ~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 96 ISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 88888888888765
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=44.28 E-value=45 Score=28.83 Aligned_cols=50 Identities=18% Similarity=0.286 Sum_probs=37.8
Q ss_pred HHhcCChHHHHHHHHhcCCccc-----------c--ccCCCChHHHHHHHhCCHHHHHHHHhc
Q 048248 11 ALRHGYTDKVREFARLNGNRIL-----------G--TSQNGDTALHIAARFGHEILVMEILKH 60 (316)
Q Consensus 11 a~~~g~~~~~~~ll~~~~~~~~-----------~--~~~~g~t~Lh~A~~~~~~~~v~~Ll~~ 60 (316)
.+..|+...|+.++..+|...- . .-..|.|.+|+|.++.+.+++-.|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 4568999999999987765211 1 123589999999999999999988863
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=43.32 E-value=17 Score=19.55 Aligned_cols=17 Identities=18% Similarity=0.120 Sum_probs=14.1
Q ss_pred HHHHHHcCChhHHHHHh
Q 048248 296 LHLAAINNHFNIILVLA 312 (316)
Q Consensus 296 L~~A~~~~~~~~~~~Ll 312 (316)
+..||+.|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 56889999999988884
Done!