Query 048253
Match_columns 323
No_of_seqs 304 out of 3200
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 13:23:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/048253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/048253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyh_A HN1;, notch 1, ankyrin 100.0 9.5E-45 3.3E-49 311.8 21.1 220 1-249 10-243 (253)
2 3aji_A 26S proteasome non-ATPa 100.0 2.8E-43 9.6E-48 298.0 24.7 218 1-248 6-224 (231)
3 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-43 6.5E-48 300.7 23.0 217 1-248 9-235 (241)
4 2xai_A ASB-9, ankyrin repeat a 100.0 4.4E-43 1.5E-47 302.9 24.1 213 1-248 3-216 (261)
5 3b7b_A Euchromatic histone-lys 100.0 7E-43 2.4E-47 296.7 25.0 217 1-248 11-229 (237)
6 1oy3_D Transcription factor in 100.0 1.5E-43 5E-48 308.2 21.0 212 1-235 9-268 (282)
7 2dzn_A Probable 26S proteasome 100.0 8E-43 2.7E-47 294.5 24.7 209 1-234 2-217 (228)
8 3d9h_A CDNA FLJ77766, highly s 100.0 2.9E-42 1E-46 301.6 24.7 213 1-248 59-272 (285)
9 1wdy_A 2-5A-dependent ribonucl 100.0 8.5E-42 2.9E-46 297.0 25.9 218 1-248 5-238 (285)
10 4b93_B Ankyrin repeat domain-c 100.0 7E-43 2.4E-47 302.8 19.0 209 2-234 12-227 (269)
11 4g8k_A 2-5A-dependent ribonucl 100.0 7.8E-42 2.7E-46 305.6 24.6 251 1-277 25-327 (337)
12 1wdy_A 2-5A-dependent ribonucl 100.0 3E-41 1E-45 293.5 25.0 219 1-248 39-272 (285)
13 1s70_B 130 kDa myosin-binding 100.0 4.8E-42 1.6E-46 301.6 18.5 218 1-248 40-284 (299)
14 3ljn_A Hypothetical protein; a 100.0 8.1E-42 2.8E-46 308.7 20.2 218 1-248 20-263 (364)
15 3eu9_A Huntingtin-interacting 100.0 9.1E-41 3.1E-45 283.4 23.7 218 1-248 9-229 (240)
16 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-40 3.6E-45 298.7 24.4 240 1-270 24-328 (351)
17 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-40 3.7E-45 308.4 25.0 232 1-263 146-385 (437)
18 2fo1_E LIN-12 protein; beta-ba 100.0 1.1E-41 3.7E-46 309.1 17.2 218 1-249 125-366 (373)
19 1n11_A Ankyrin; clathrin, BAND 100.0 3E-40 1E-44 305.4 25.4 247 1-263 14-286 (437)
20 3d9h_A CDNA FLJ77766, highly s 100.0 1.7E-40 5.8E-45 290.4 22.3 218 1-248 15-241 (285)
21 3utm_A Tankyrase-1; tankyrase, 100.0 2.8E-40 9.6E-45 296.0 23.3 216 1-250 58-330 (351)
22 2f8y_A Notch homolog 1, transl 100.0 1.2E-40 4.2E-45 280.3 19.6 208 12-248 2-210 (223)
23 2rfa_A Transient receptor pote 100.0 1.1E-38 3.7E-43 270.0 21.8 198 1-221 3-226 (232)
24 2xai_A ASB-9, ankyrin repeat a 100.0 4.4E-39 1.5E-43 277.8 19.0 204 1-234 36-247 (261)
25 3kea_A K1L; tropism, ANK repea 100.0 4E-39 1.4E-43 281.7 18.8 207 1-248 31-240 (285)
26 1ikn_D Protein (I-kappa-B-alph 100.0 4E-40 1.4E-44 279.8 11.4 211 1-234 8-228 (236)
27 2f8y_A Notch homolog 1, transl 100.0 4.1E-38 1.4E-42 264.8 23.2 189 1-214 25-214 (223)
28 4g8k_A 2-5A-dependent ribonucl 100.0 5.6E-38 1.9E-42 280.6 25.1 216 1-248 59-320 (337)
29 1oy3_D Transcription factor in 100.0 1.3E-38 4.4E-43 277.0 19.3 190 33-248 5-244 (282)
30 3ljn_A Hypothetical protein; a 100.0 1E-38 3.4E-43 288.4 19.3 215 1-248 53-309 (364)
31 3aji_A 26S proteasome non-ATPa 100.0 5.3E-38 1.8E-42 265.5 20.5 190 1-217 40-230 (231)
32 1yyh_A HN1;, notch 1, ankyrin 100.0 8.4E-38 2.9E-42 268.4 21.7 189 1-214 57-246 (253)
33 2fo1_E LIN-12 protein; beta-ba 100.0 1.3E-39 4.6E-44 295.3 11.0 218 1-248 94-332 (373)
34 3hra_A Ankyrin repeat family p 100.0 2.9E-37 9.8E-42 255.5 22.4 189 1-214 5-201 (201)
35 3b7b_A Euchromatic histone-lys 100.0 4.4E-37 1.5E-41 260.9 22.6 190 32-248 6-196 (237)
36 2rfa_A Transient receptor pote 100.0 3.3E-37 1.1E-41 261.0 20.9 186 36-248 2-216 (232)
37 3hra_A Ankyrin repeat family p 100.0 3.5E-37 1.2E-41 255.0 20.5 188 35-248 3-197 (201)
38 2dzn_A Probable 26S proteasome 100.0 6E-37 2.1E-41 258.4 21.5 187 37-248 2-193 (228)
39 3kea_A K1L; tropism, ANK repea 100.0 2.7E-37 9.2E-42 270.1 17.9 204 9-248 7-214 (285)
40 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-36 3.8E-41 258.8 21.2 189 33-248 5-202 (241)
41 2etb_A Transient receptor pote 100.0 9.5E-38 3.3E-42 268.4 13.5 196 1-218 2-247 (256)
42 1ikn_D Protein (I-kappa-B-alph 100.0 6.4E-38 2.2E-42 266.2 12.2 190 33-248 4-203 (236)
43 2pnn_A Transient receptor pote 100.0 4.7E-38 1.6E-42 272.9 11.2 209 1-230 13-272 (273)
44 4b93_B Ankyrin repeat domain-c 100.0 4.4E-37 1.5E-41 266.4 14.5 177 1-186 52-230 (269)
45 4gpm_A Engineered protein OR26 100.0 4.1E-36 1.4E-40 242.0 18.6 158 39-220 6-164 (169)
46 2etb_A Transient receptor pote 100.0 1E-36 3.5E-41 261.9 15.9 194 36-249 1-241 (256)
47 4gpm_A Engineered protein OR26 100.0 1.3E-35 4.4E-40 239.0 18.6 155 3-163 6-161 (169)
48 1sw6_A Regulatory protein SWI6 100.0 1.6E-36 5.5E-41 270.3 13.6 198 4-234 100-325 (327)
49 1s70_B 130 kDa myosin-binding 100.0 1.7E-35 5.8E-40 259.8 18.1 217 7-248 4-251 (299)
50 3jxi_A Vanilloid receptor-rela 100.0 2.6E-36 8.9E-41 259.9 12.4 196 1-218 5-251 (260)
51 3eu9_A Huntingtin-interacting 100.0 6.2E-35 2.1E-39 247.4 20.5 192 1-218 42-236 (240)
52 2pnn_A Transient receptor pote 100.0 1.2E-35 4.1E-40 257.7 14.4 199 33-248 9-252 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 4.6E-35 1.6E-39 252.1 14.6 198 34-249 2-245 (260)
54 4hbd_A KN motif and ankyrin re 100.0 8.3E-35 2.8E-39 253.1 15.4 191 2-215 77-274 (276)
55 3v30_A DNA-binding protein rfx 100.0 2.7E-34 9.3E-39 231.9 17.1 169 37-228 2-171 (172)
56 2vge_A RELA-associated inhibit 100.0 3.1E-36 1.1E-40 254.9 2.9 201 17-248 1-207 (229)
57 2rfm_A Putative ankyrin repeat 100.0 2.1E-33 7.2E-38 230.8 16.9 159 33-214 31-190 (192)
58 3v30_A DNA-binding protein rfx 100.0 2.3E-33 7.8E-38 226.5 16.6 168 2-177 3-171 (172)
59 4hbd_A KN motif and ankyrin re 100.0 6.3E-34 2.2E-38 247.5 11.6 185 37-248 76-269 (276)
60 3v31_A Ankyrin repeat family A 100.0 1E-32 3.5E-37 221.6 17.5 156 36-214 2-158 (167)
61 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-32 3.8E-37 220.0 16.3 156 2-163 6-162 (162)
62 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.6E-32 9E-37 219.8 17.7 158 34-214 11-169 (169)
63 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-32 4.3E-37 219.8 15.1 158 36-217 4-162 (162)
64 3f6q_A Integrin-linked protein 100.0 2.3E-32 7.8E-37 222.2 16.8 167 36-225 4-171 (179)
65 3v31_A Ankyrin repeat family A 100.0 3.4E-32 1.2E-36 218.5 17.1 157 1-163 3-160 (167)
66 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.9E-32 2E-36 217.7 17.5 154 2-161 15-169 (169)
67 2rfm_A Putative ankyrin repeat 100.0 3.1E-32 1E-36 223.9 15.9 158 64-248 28-186 (192)
68 1sw6_A Regulatory protein SWI6 100.0 6.4E-33 2.2E-37 247.0 11.9 169 1-185 131-327 (327)
69 1awc_B Protein (GA binding pro 100.0 2.2E-31 7.4E-36 210.8 17.0 143 38-187 3-146 (153)
70 3twr_A Tankyrase-2; ankyrin re 100.0 5.5E-32 1.9E-36 216.9 13.1 158 34-214 5-163 (165)
71 3f6q_A Integrin-linked protein 100.0 2.9E-31 9.8E-36 215.7 17.4 166 1-174 5-171 (179)
72 1awc_B Protein (GA binding pro 100.0 3E-31 1E-35 210.0 16.5 149 2-157 3-152 (153)
73 3twr_A Tankyrase-2; ankyrin re 100.0 2E-31 6.9E-36 213.5 15.5 156 1-162 8-164 (165)
74 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.7E-33 5.8E-38 239.6 2.9 207 1-234 5-227 (239)
75 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.2E-31 1.8E-35 209.1 16.1 143 38-187 3-146 (156)
76 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.3E-31 2.8E-35 207.9 15.6 153 1-160 2-155 (156)
77 2aja_A Ankyrin repeat family p 100.0 2.7E-33 9.2E-38 252.8 1.3 226 2-248 93-338 (376)
78 2vge_A RELA-associated inhibit 100.0 6.8E-34 2.3E-38 240.5 -3.0 176 2-187 22-201 (229)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.9E-32 3E-36 229.0 10.0 174 36-234 4-190 (239)
80 3t8k_A Uncharacterized protein 100.0 6.4E-29 2.2E-33 203.1 11.0 162 37-223 6-185 (186)
81 1bi7_B P16INK4A, MTS1, multipl 100.0 8.1E-29 2.8E-33 196.7 10.4 138 35-179 10-149 (156)
82 1bi7_B P16INK4A, MTS1, multipl 100.0 8.7E-29 3E-33 196.5 10.4 138 1-145 12-151 (156)
83 1d9s_A Cyclin-dependent kinase 100.0 3.9E-28 1.3E-32 188.2 12.0 128 32-163 7-136 (136)
84 1d9s_A Cyclin-dependent kinase 100.0 4.3E-28 1.5E-32 188.0 11.5 132 61-217 3-136 (136)
85 2aja_A Ankyrin repeat family p 100.0 3.4E-30 1.2E-34 232.5 -0.7 196 4-246 68-271 (376)
86 3t8k_A Uncharacterized protein 99.9 7E-28 2.4E-32 196.9 9.7 156 71-249 6-174 (186)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.3E-26 4.5E-31 176.4 15.2 124 37-163 2-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 1.5E-26 5.1E-31 179.2 13.4 125 34-161 11-136 (136)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.7E-26 1.6E-30 173.3 14.7 125 70-217 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-26 9.9E-31 177.6 12.8 126 67-214 10-136 (136)
91 3ui2_A Signal recognition part 99.9 7.7E-28 2.6E-32 205.3 3.0 139 35-214 43-183 (244)
92 3deo_A Signal recognition part 99.9 1E-25 3.6E-30 183.5 12.1 136 1-160 44-181 (183)
93 3c5r_A BARD-1, BRCA1-associate 99.9 6.6E-26 2.2E-30 175.7 10.2 116 67-187 6-122 (137)
94 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-25 3.8E-30 174.4 11.1 123 100-248 5-128 (137)
95 3ui2_A Signal recognition part 99.9 1.2E-25 4.1E-30 191.7 12.0 138 1-162 45-184 (244)
96 3deo_A Signal recognition part 99.9 2.1E-25 7.3E-30 181.7 12.1 139 34-213 41-181 (183)
97 3ehr_A Osteoclast-stimulating 99.9 9.7E-26 3.3E-30 189.3 8.3 139 65-225 67-206 (222)
98 2b0o_E UPLC1; arfgap, structur 99.9 4E-25 1.4E-29 194.2 12.2 139 37-187 151-299 (301)
99 2b0o_E UPLC1; arfgap, structur 99.9 6E-25 2E-29 193.0 11.7 140 3-151 153-299 (301)
100 3aaa_C Myotrophin, protein V-1 99.9 1.2E-24 4.1E-29 165.4 11.1 110 103-234 5-115 (123)
101 3aaa_C Myotrophin, protein V-1 99.9 1E-24 3.5E-29 165.8 10.7 115 35-152 5-120 (123)
102 3ehr_A Osteoclast-stimulating 99.9 4E-25 1.4E-29 185.5 9.0 132 34-168 70-203 (222)
103 1dcq_A PYK2-associated protein 99.9 1.2E-23 4E-28 182.7 11.5 122 72-214 131-261 (278)
104 3jue_A Arfgap with coiled-coil 99.9 2E-23 6.7E-28 187.7 12.1 147 36-185 198-348 (368)
105 3lvq_E ARF-GAP with SH3 domain 99.9 1.8E-22 6.3E-27 189.3 15.0 135 37-183 132-276 (497)
106 1dcq_A PYK2-associated protein 99.9 1.9E-22 6.5E-27 175.1 13.5 185 33-248 62-257 (278)
107 3jue_A Arfgap with coiled-coil 99.9 1.2E-22 4E-27 182.7 12.4 145 68-234 196-346 (368)
108 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.2E-22 1.1E-26 144.2 11.4 91 1-95 2-92 (93)
109 3lvq_E ARF-GAP with SH3 domain 99.9 2.4E-22 8.2E-27 188.5 13.3 135 71-234 132-276 (497)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.1E-21 3.9E-26 141.3 11.9 87 37-125 2-89 (93)
111 2l6b_A NR1C; ankyrin, consensu 99.9 6.7E-22 2.3E-26 148.2 8.8 107 101-229 5-112 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.9 8.8E-22 3E-26 147.6 8.1 105 34-141 6-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 7.4E-19 2.5E-23 130.6 10.0 89 33-123 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 7.4E-19 2.5E-23 130.6 8.6 92 132-248 18-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 55.4 24 0.0008 30.6 6.4 26 134-159 213-238 (351)
116 3zrh_A Ubiquitin thioesterase 42.6 68 0.0023 28.4 6.9 53 6-58 27-90 (454)
117 3gvo_A Pumilio 2, pumilio homo 41.9 49 0.0017 28.5 6.2 93 33-125 69-166 (351)
118 1gp8_A Protein (scaffolding pr 31.4 37 0.0013 18.8 2.2 17 75-91 17-33 (40)
119 3k49_A MRNA-binding protein PU 25.0 58 0.002 28.2 3.8 155 33-187 74-235 (369)
120 3zrh_A Ubiquitin thioesterase 22.8 1.9E+02 0.0066 25.6 6.4 50 43-92 28-90 (454)
No 1
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=9.5e-45 Score=311.80 Aligned_cols=220 Identities=19% Similarity=0.140 Sum_probs=182.1
Q ss_pred CCcHHHHHHHhC-------------CHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCccccc
Q 048253 1 MKSMLYEAALKG-------------CEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGEL 67 (323)
Q Consensus 1 g~t~L~~A~~~g-------------~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~ 67 (323)
|+||||.|+..| +.+++++|++.+++++.. .|..|.||||+|+..|+.+++++|+++++++ +.+
T Consensus 10 g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~ 86 (253)
T 1yyh_A 10 GFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQ 86 (253)
T ss_dssp ------------------------------------------C--CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCC
T ss_pred CCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCC
Confidence 789999999988 999999999999886543 3667999999999999999999999999998 899
Q ss_pred CCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHH
Q 048253 68 DSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCV 146 (323)
Q Consensus 68 ~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~ 146 (323)
|..|+||||+|+..|+.+++++|++.++...+.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+
T Consensus 87 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~ 165 (253)
T 1yyh_A 87 DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAA 165 (253)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHH-TTCCTTCBCTTSCBHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999984338889999 99999999999999999999 88999999999999999999
Q ss_pred hhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCC
Q 048253 147 KHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGF 226 (323)
Q Consensus 147 ~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~ 226 (323)
..|+.+++++|+++|++ ++.+|..|+||||+|+..|+. +++++|+++| ++++.+|..|+
T Consensus 166 ~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpL~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~d~~g~ 224 (253)
T 1yyh_A 166 AVNNVDAAVVLLKNGAN---KDMQNNREETPLFLAAREGSY-----------------ETAKVLLDHF-ANRDITDHMDR 224 (253)
T ss_dssp HHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH-----------------HHHHHHHHTT-CCTTCCCTTCC
T ss_pred HcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHCCCH-----------------HHHHHHHHcC-CCccccccCCC
Confidence 99999999999999999 899999999999999999999 9999999999 89999999999
Q ss_pred chhhhhhhccCCCchhhhHHHHh
Q 048253 227 MALDTLAQSKRDKKDWEIEDWKM 249 (323)
Q Consensus 227 tpl~~A~~~~~~~~~~~i~~~L~ 249 (323)
||+++|++ .++.+|+++|.
T Consensus 225 tpl~~A~~----~g~~~i~~~l~ 243 (253)
T 1yyh_A 225 LPRDIAQE----RMHHDIVRLLD 243 (253)
T ss_dssp CHHHHHHH----TTCHHHHHHHH
T ss_pred CHHHHHHH----cCCHHHHHHHH
Confidence 99999999 99999999994
No 2
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2.8e-43 Score=298.00 Aligned_cols=218 Identities=22% Similarity=0.212 Sum_probs=206.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
++||||.|++.|+.+.+++|++.++... ...|..|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+.
T Consensus 6 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 82 (231)
T 3aji_A 6 SNIMICNLAYSGKLDELKERILADKSLA--TRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIAAS 82 (231)
T ss_dssp SSSHHHHHHHHTCHHHHHHHHHHCGGGG--GCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHH
T ss_pred ccchHHHHHHhCCHHHHHHHHHhchhhh--hcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHHHH
Confidence 4799999999999999999999987643 335777999999999999999999999999987 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 160 (231)
T 3aji_A 83 AGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAASKNRHEIAVMLLE-GGANPDAKDHYDATAMHRAAAKGNLKMVHILLF 160 (231)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999998 7889999 99999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCC
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDK 239 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~ 239 (323)
+|++ ++.+|..|+||||+|+..++. +++++|+++| ++++.+|..|+||+++|.+ .
T Consensus 161 ~g~~---~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~----~ 215 (231)
T 3aji_A 161 YKAS---TNIQDTEGNTPLHLACDEERV-----------------EEAKFLVTQG-ASIYIENKEEKTPLQVAKG----G 215 (231)
T ss_dssp TTCC---SCCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHTT-CCSCCCCTTSCCHHHHSCH----H
T ss_pred cCCC---ccccCCCCCCHHHHHHHCCCH-----------------HHHHHHHHCC-CCCCCCCCCCCCHHHHHHh----h
Confidence 9998 899999999999999999999 9999999998 8999999999999999999 8
Q ss_pred chhhhHHHH
Q 048253 240 KDWEIEDWK 248 (323)
Q Consensus 240 ~~~~i~~~L 248 (323)
++.+++++|
T Consensus 216 ~~~~i~~lL 224 (231)
T 3aji_A 216 LGLILKRLA 224 (231)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
No 3
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-43 Score=300.65 Aligned_cols=217 Identities=21% Similarity=0.193 Sum_probs=202.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHhc----cCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQ----QDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALH 76 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~ 76 (323)
|+||||.|+..|+.+++++|++ .+.+++ ..|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~ 84 (241)
T 1k1a_A 9 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD---IYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTAAH 84 (241)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCC---cccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCHHH
Confidence 7899999999999999999997 555543 34777999999999999999999999999998 889999999999
Q ss_pred HHHhcCCHHHHHHHHhcCC----ccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccc-cccccHHHHHHhhCc
Q 048253 77 IASQKVHVDKIKALLQVNP----AWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATM-IWGETILHLCVKHNQ 150 (323)
Q Consensus 77 ~A~~~g~~~~v~~Ll~~~~----~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A~~~g~ 150 (323)
+|+..|+.+++++|++.++ ++ ...+..| ||||+|+..|+.+++++|++ .+.+++..+ ..|.||||+|+..|+
T Consensus 85 ~A~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~g~t~L~~A~~~~~ 162 (241)
T 1k1a_A 85 LACEHRSPTCLRALLDSAAPGTLDL-EARNYDGLTALHVAVNTECQETVQLLLE-RGADIDAVDIKSGRSPLIHAVENNS 162 (241)
T ss_dssp HHHHTTCHHHHHHHHHHSCTTSCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTTCCCHHHHHHHTTC
T ss_pred HHHHcCCHHHHHHHHHcCCCccccc-cccCcCCCcHHHHHHHcCCHHHHHHHHH-cCCCcccccccCCCcHHHHHHHcCC
Confidence 9999999999999999987 55 7788889 99999999999999999999 788888888 789999999999999
Q ss_pred hhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhh
Q 048253 151 LDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALD 230 (323)
Q Consensus 151 ~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~ 230 (323)
.+++++|+++|++ ++.+|..|+||||+|+..++. +++++|+++| ++++.+|..|.||++
T Consensus 163 ~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~tpl~ 221 (241)
T 1k1a_A 163 LSMVQLLLQHGAN---VNAQMYSGSSALHSASGRGLL-----------------PLVRTLVRSG-ADSSLKNCHNDTPLM 221 (241)
T ss_dssp HHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHHTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCTTT
T ss_pred HHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCH-----------------HHHHHHHhcC-CCCCCcCCCCCCHHH
Confidence 9999999999999 999999999999999999999 9999999998 899999999999999
Q ss_pred hhhhccCCCchhhhHHHH
Q 048253 231 TLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 231 ~A~~~~~~~~~~~i~~~L 248 (323)
+|++ .+..++++.|
T Consensus 222 ~A~~----~~~~~i~~~l 235 (241)
T 1k1a_A 222 VARS----RRVIDILRGK 235 (241)
T ss_dssp TCSS----HHHHHHHTC-
T ss_pred HHHh----cCcHHHHhhh
Confidence 9999 9999999988
No 4
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.4e-43 Score=302.87 Aligned_cols=213 Identities=20% Similarity=0.181 Sum_probs=197.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++++.+++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (261)
T 2xai_A 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNI---ITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 78 (261)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSSC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 78999999999999999999999987643 4778999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +. +..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 155 (261)
T 2xai_A 79 SGSWDCVNLLLQHGASV-QP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLE 155 (261)
T ss_dssp HTCHHHHHHHHHTTCCS-SC-SCTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CC-CCCCCCHHHHHHHcCcHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999998 43 4557 99999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCC
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDK 239 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~ 239 (323)
+|++ ++. |..|+||||+|+..++. +++++|+++| ++++.+|.+|+||+|+|++ .
T Consensus 156 ~g~~---~~~-~~~g~t~Lh~A~~~~~~-----------------~~v~~Ll~~g-ad~~~~d~~g~tpl~~A~~----~ 209 (261)
T 2xai_A 156 SGAD---VNQ-GKGQDSPLHAVARTASE-----------------ELACLLMDFG-ADTQAKNAEGKRPVELVPP----E 209 (261)
T ss_dssp HTCC---TTC-CBTTBCHHHHHHHHTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCGGGGSCT----T
T ss_pred cCCC---CCC-CCCCCChHHHHHHcCCH-----------------HHHHHHHHcC-CCCCCcCCCCCChhhhccc----c
Confidence 9998 774 88999999999999999 9999999998 9999999999999999997 4
Q ss_pred chhhhHHHH
Q 048253 240 KDWEIEDWK 248 (323)
Q Consensus 240 ~~~~i~~~L 248 (323)
+ +++++|
T Consensus 210 ~--~~~~~l 216 (261)
T 2xai_A 210 S--PLAQLF 216 (261)
T ss_dssp C--THHHHH
T ss_pred c--cHHHHH
Confidence 3 366666
No 5
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=7e-43 Score=296.70 Aligned_cols=217 Identities=19% Similarity=0.126 Sum_probs=202.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++++.+++. .+..|.||||+|+..|+.+++++|+++++++ +.++..|.||||+|+.
T Consensus 11 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 86 (237)
T 3b7b_A 11 KRSPLHAAAEAGHVDICHMLVQAGANIDT---CSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHLAAK 86 (237)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCcCc---cCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHH
Confidence 68999999999999999999999987644 3677999999999999999999999999987 8899999999999999
Q ss_pred cCCHHHHHHHHhcC-CccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHH
Q 048253 81 KVHVDKIKALLQVN-PAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLL 158 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~-~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 158 (323)
.|+.+++++|++.+ .++ +..+..| ||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+
T Consensus 87 ~~~~~~~~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll 164 (237)
T 3b7b_A 87 KGHYEVVQYLLSNGQMDV-NCQDDGGWTPMIWATEYKHVDLVKLLLS-KGSDINIRDNEENICLHWAAFSGCVDIAEILL 164 (237)
T ss_dssp TTCHHHHHHHHTTTCCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHH
T ss_pred cCCHHHHHHHHhCCCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCccCCCCCCHHHHHHHCCCHHHHHHHH
Confidence 99999999999999 555 7888999 99999999999999999999 88999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCC
Q 048253 159 DNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRD 238 (323)
Q Consensus 159 ~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~ 238 (323)
++|++ ++.+|..|.||||+|+..++. +++++|+++| ++++.+|.+|+||+|+|+.
T Consensus 165 ~~g~~---~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~---- 219 (237)
T 3b7b_A 165 AAKCD---LHAVNIHGDSPLHIAARENRY-----------------DCVVLFLSRD-SDVTLKNKEGETPLQCASL---- 219 (237)
T ss_dssp TTTCC---TTCCCTTCCCHHHHHHHTTCH-----------------HHHHHHHTTT-CCTTCCCTTSCCHHHHSCT----
T ss_pred HcCCC---CCCcCCCCCCHHHHHHHhCCH-----------------hHHHHHHHcC-CCCCccCCCCCCHHHHHHH----
Confidence 99998 899999999999999999999 9999999998 8999999999999999999
Q ss_pred CchhhhHHHH
Q 048253 239 KKDWEIEDWK 248 (323)
Q Consensus 239 ~~~~~i~~~L 248 (323)
.++.+...++
T Consensus 220 ~~~~~~~~~l 229 (237)
T 3b7b_A 220 NSQVWSALQM 229 (237)
T ss_dssp TCHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766444443
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.5e-43 Score=308.24 Aligned_cols=212 Identities=22% Similarity=0.148 Sum_probs=184.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.++|++|++.+++.......|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 9 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~ 87 (282)
T 1oy3_D 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALHLACR 87 (282)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 789999999999999999999998874444556788999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCcc----------------------------------------------ccccCCCC-cHHHHHHH
Q 048253 81 KVHVDKIKALLQVNPAW----------------------------------------------CFAGDLDG-SPLHLAAM 113 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~----------------------------------------------~~~~~~~g-t~L~~A~~ 113 (323)
.|+.+++++|++++++. .+.++..| ||||+|+.
T Consensus 88 ~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~ 167 (282)
T 1oy3_D 88 VRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167 (282)
T ss_dssp TTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHH
T ss_pred cCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHH
Confidence 99999999999987651 15667889 99999999
Q ss_pred hCCHHHHHHHHHhCCCcccccccc-cccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHH
Q 048253 114 KGRIDVLEELFRTRPLAASATMIW-GETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLV 192 (323)
Q Consensus 114 ~g~~~~v~~Ll~~~~~~~~~~~~~-g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ 192 (323)
.|+.+++++|++ .+.+++..+.. |+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.
T Consensus 168 ~g~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~----- 238 (282)
T 1oy3_D 168 HKDAEMVRLLRD-AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD---PTARMYGGRTPLGSALLRPNP----- 238 (282)
T ss_dssp TTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHTSSCH-----
T ss_pred cCCHHHHHHHHH-cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---CcccccCCCCHHHHHHHcCCc-----
Confidence 999999999999 78888888854 99999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhc
Q 048253 193 ELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQS 235 (323)
Q Consensus 193 ~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~ 235 (323)
+++++|+++| ++++.+|..|.||+++|...
T Consensus 239 ------------~~v~~Ll~~g-a~~~~~~~~g~tpl~~a~~~ 268 (282)
T 1oy3_D 239 ------------ILARLLRAHG-APEPEDGGDKLSPCSSSGSD 268 (282)
T ss_dssp ------------HHHHHHHHTT-CCCCCCC-------------
T ss_pred ------------HHHHHHHHcC-CCcCcCCCcccccccccCCc
Confidence 9999999999 99999999999999999883
No 7
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=8e-43 Score=294.47 Aligned_cols=209 Identities=19% Similarity=0.156 Sum_probs=194.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhC--CCcccccCCCCCcHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQK--PELAGELDSNQFSALHIA 78 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpL~~A 78 (323)
|+||||.|++.|+.+++++|++.+++.... .|..|.||||+|+..|+.+++++|++++ .++....+..|+||||+|
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A 79 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQ--KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIA 79 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTC--CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCcccccc--CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHH
Confidence 789999999999999999999999876443 4677999999999999999999999999 565333889999999999
Q ss_pred HhcCCHHHHHHHHhcC--CccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHH
Q 048253 79 SQKVHVDKIKALLQVN--PAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALK 155 (323)
Q Consensus 79 ~~~g~~~~v~~Ll~~~--~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~ 155 (323)
+..|+.+++++|+++| +++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.++++
T Consensus 80 ~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~ 157 (228)
T 2dzn_A 80 CSVGNLEVVKSLYDRPLKPDL-NKITNQGVTCLHLAVGKKWFEVSQFLIE-NGASVRIKDKFNQIPLHRAASVGSLKLIE 157 (228)
T ss_dssp HHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHcCCHHHHHHHHhCCCCccc-ccCCcCCCCHHHHHHHcCCHhHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHH
Confidence 9999999999999998 777 7788889 99999999999999999999 78999999999999999999999999999
Q ss_pred HHHhCC-CCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHh-hcccccccccccCCCchhhhhh
Q 048253 156 FLLDNM-DDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLT-TRTMIEVNALNANGFMALDTLA 233 (323)
Q Consensus 156 ~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll-~~g~~~~~~~d~~g~tpl~~A~ 233 (323)
+|+++| ++ ++.+|..|+||||+|+..++. +++++|+ +.| ++++.+|.+|+||+++|.
T Consensus 158 ~Ll~~g~~~---~~~~d~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~~g-a~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 158 LLCGLGKSA---VNWQDKQGWTPLFHALAEGHG-----------------DAAVLLVEKYG-AEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp HHHTTTCCC---SCCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHHHC-CCSCCBCTTSCBGGGGCS
T ss_pred HHHhcCccc---ccCcCCCCCCHHHHHHHcCCH-----------------HHHHHHHHhcC-CCCCccCCCCCcHHHHHH
Confidence 999999 77 899999999999999999999 9999999 777 999999999999999998
Q ss_pred h
Q 048253 234 Q 234 (323)
Q Consensus 234 ~ 234 (323)
+
T Consensus 217 ~ 217 (228)
T 2dzn_A 217 N 217 (228)
T ss_dssp S
T ss_pred H
Confidence 7
No 8
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=301.57 Aligned_cols=213 Identities=21% Similarity=0.172 Sum_probs=198.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+.+++.. |..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 59 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~ 134 (285)
T 3d9h_A 59 DWSPMHEAAIHGHQLSLRNLISQGWAVNII---TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACV 134 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCEE---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCc---CCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 689999999999999999999999886544 777999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|++.|+++ .. +..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|++
T Consensus 135 ~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 211 (285)
T 3d9h_A 135 SGSWDCVNLLLQHGASV-QP-ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHLGTPLYLACENQQRACVKKLLE 211 (285)
T ss_dssp HTCHHHHHHHHHTTCCS-SC-SCTTSCHHHHHHHHTCHHHHHHHHH-TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHCCCCC-CC-CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999998 43 3458 99999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCC
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDK 239 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~ 239 (323)
+|++ ++. |..|+||||+|+..++. +++++|+++| ++++.+|.+|+||+|+|+. .
T Consensus 212 ~ga~---~~~-~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-ad~~~~d~~g~t~l~~A~~----~ 265 (285)
T 3d9h_A 212 SGAD---VNQ-GKGQDSPLHAVVRTASE-----------------ELACLLMDFG-ADTQAKNAEGKRPVELVPP----E 265 (285)
T ss_dssp TTCC---TTC-CBTTBCHHHHHHHTTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCGGGGSCT----T
T ss_pred CCCC---CCC-CCCCCCHHHHHHHcCCH-----------------HHHHHHHHCC-CCCCCcCCCCCCHHHHhcC----c
Confidence 9998 774 88999999999999999 9999999998 9999999999999999996 3
Q ss_pred chhhhHHHH
Q 048253 240 KDWEIEDWK 248 (323)
Q Consensus 240 ~~~~i~~~L 248 (323)
.+++++|
T Consensus 266 --~~~~~~L 272 (285)
T 3d9h_A 266 --SPLAQLF 272 (285)
T ss_dssp --SHHHHHH
T ss_pred --cHHHHHH
Confidence 4677777
No 9
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=8.5e-42 Score=296.96 Aligned_cols=218 Identities=20% Similarity=0.172 Sum_probs=163.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|++.|+.++|++|++.+++++.. .+..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+.
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~--~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQ--EEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLLAAI 81 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 467888888888888888888887765433 2445788888888888888888888888776 7777888888888888
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccccc----------ccccccHHHHHHhhC
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASAT----------MIWGETILHLCVKHN 149 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~----------~~~g~t~Lh~A~~~g 149 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++.. +..|.||||+|+..|
T Consensus 82 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T 1wdy_A 82 AGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAVYGKVKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred cCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHHhCCHHHHHHHHH-hCCCcccccccHHHHHhhccCCCcHHHHHHHcC
Confidence 88888888888888877 6677777 88888888888888888887 56666655 666778888888888
Q ss_pred chhHHHHHHhC-CCCCCCCcccccCCCcHHHHHHhhcc----hhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccC
Q 048253 150 QLDALKFLLDN-MDDPQFLNAEDDYGMTITQLAVAVKL----CFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNAN 224 (323)
Q Consensus 150 ~~~~v~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~----~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~ 224 (323)
+.+++++|++. |++ ++.+|..|+||||+|+..++ . +++++|+++| ++++.+|..
T Consensus 160 ~~~~v~~Ll~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~-----------------~i~~~Ll~~g-~~~~~~~~~ 218 (285)
T 1wdy_A 160 HVEVLKILLDEMGAD---VNACDNMGRNALIHALLSSDDSDVE-----------------AITHLLLDHG-ADVNVRGER 218 (285)
T ss_dssp CHHHHHHHHHTSCCC---TTCCCTTSCCHHHHHHHCSCTTTHH-----------------HHHHHHHHTT-CCSSCCCTT
T ss_pred CHHHHHHHHHhcCCC---CCccCCCCCCHHHHHHHccccchHH-----------------HHHHHHHHcC-CCCCCcCCC
Confidence 88888888876 766 77777888888888887777 4 5666666665 566666666
Q ss_pred CCchhhhhhhccCCCchhhhHHHH
Q 048253 225 GFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 225 g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
|.||||+|++ .++.+++++|
T Consensus 219 g~t~L~~A~~----~~~~~~v~~L 238 (285)
T 1wdy_A 219 GKTPLILAVE----KKHLGLVQRL 238 (285)
T ss_dssp SCCHHHHHHH----TTCHHHHHHH
T ss_pred CCcHHHHHHH----cCCHHHHHHH
Confidence 6666666666 5666666665
No 10
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=7e-43 Score=302.83 Aligned_cols=209 Identities=22% Similarity=0.198 Sum_probs=169.9
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccc-----cccCCCCCCCHHHHHHHcCCH-HHHHHHHHhCCCcccccCCCCCcHH
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIG-----RVGVNCLSEFPLHAAALLGHV-DFEGEIRRQKPELAGELDSNQFSAL 75 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~-----~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~~~~~~~g~tpL 75 (323)
.++|+.||..|+.++|++|++.++.... ....+..|.||||.|+..++. .++++|++.|+++ +.+|.+|+|||
T Consensus 12 ~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n~~d~~G~TpL 90 (269)
T 4b93_B 12 VEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-NVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCT-TCCCTTSCCHH
T ss_pred hhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-CCcCCCCCCHH
Confidence 4799999999999999999998875321 223456789999999998876 4889999999998 99999999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHH
Q 048253 76 HIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDAL 154 (323)
Q Consensus 76 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v 154 (323)
|+|+..|+.+++++|++.|+++ ..++..| ||+|+|+..++.+++++|++ .+.+++.+|..|+||||+|+..|+.+++
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~~~~~~~~~~~Ll~-~g~~~n~~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLACQQGHFQVVKCLLD-SNAKPNKKDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCGGGH
T ss_pred HHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCccccccccChHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence 9999999999999999999999 8889999 99999999999999999999 8899999999999999999999999999
Q ss_pred HHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhh
Q 048253 155 KFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQ 234 (323)
Q Consensus 155 ~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~ 234 (323)
++|+++|++ +|.+|..|+||||+|+..|+. ++|++|+++| +|++.+|.+|+||||+|++
T Consensus 169 ~~Ll~~gad---vn~~~~~g~t~Lh~A~~~g~~-----------------~~v~~Ll~~G-ad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 169 ALLLQHGAS---INASNNKGNTALHEAVIEKHV-----------------FVVELLLLHG-ASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHTTCC---TTCBCTTSCBHHHHHHHTTCH-----------------HHHHHHHHTT-CCSCCCCTTSCCSGGGSCT
T ss_pred HHHHHCCCC---CCccccCCCcHHHHHHHcCCH-----------------HHHHHHHHCC-CCCCCcCCCCCCHHHHHHh
Confidence 999999999 999999999999999999999 9999999998 9999999999999999988
No 11
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=7.8e-42 Score=305.61 Aligned_cols=251 Identities=21% Similarity=0.158 Sum_probs=213.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc-----------------
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPEL----------------- 63 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----------------- 63 (323)
|+|+||.||+.|++++|++|+++|++++... +..|.||||+|+..|+.++|++|+++|+++
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~--~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQE--EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTCCTTCCC--TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHHHCCCCCCccC--CCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 4689999999999999999999999875442 234999999999999999999999998754
Q ss_pred ---------------ccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCcccc---------ccCCCC-cHHHHHHHhCCHH
Q 048253 64 ---------------AGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCF---------AGDLDG-SPLHLAAMKGRID 118 (323)
Q Consensus 64 ---------------~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~---------~~~~~g-t~L~~A~~~g~~~ 118 (323)
++.+|..|+||||+|+..|+.+++++|+++|+++.. ..+..| ||||+|+..|+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 103 GSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp TCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred ccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 256688899999999999999999999999987631 234568 9999999999999
Q ss_pred HHHHHHHhCCCcccccccccccHHHHHHhhCc----hhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHH
Q 048253 119 VLEELFRTRPLAASATMIWGETILHLCVKHNQ----LDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVEL 194 (323)
Q Consensus 119 ~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 194 (323)
++++|+++.+++++..|..|+|++|.++..+. .+++++|+++|++ +|.+|.+|+||||+|+..++.
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad---~n~~d~~g~t~L~~a~~~~~~------- 252 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHL------- 252 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCC---TTCCCGGGCCHHHHHHHTTCH-------
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhhhh-------
Confidence 99999987899999999999999998886554 4588999999999 999999999999999999999
Q ss_pred HHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHHhhh--HHHHHHHHHHHHH----HHHH
Q 048253 195 VEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWKMIG--WKKMRNALMVVAS----LTAT 268 (323)
Q Consensus 195 l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L~~~--~~~~~~~~~~~~~----~~~~ 268 (323)
++++.|++.++++++.+|.+|+||||+|++ .++.+++++|-.. +.+.+++++.++. .+..
T Consensus 253 ----------~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~----~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~ 318 (337)
T 4g8k_A 253 ----------GLVQRLLEQEHIEINDTDSDGKTALLLAVE----LKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVK 318 (337)
T ss_dssp ----------HHHHHHHTSTTCCTTCBCTTSCBHHHHHHH----TTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHH
T ss_pred ----------HHHHHHHHhcCCcccCcCCCCCCHHHHHHH----cCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 999999987669999999999999999999 9999999999433 2233456665552 5666
Q ss_pred HHhhhccCC
Q 048253 269 MAFQAGVNP 277 (323)
Q Consensus 269 ~~~~a~~~~ 277 (323)
...+.|+.+
T Consensus 319 ~Ll~~GA~~ 327 (337)
T 4g8k_A 319 VLLSHGAKE 327 (337)
T ss_dssp HHHHTTCCC
T ss_pred HHHHCcCCC
Confidence 677777543
No 12
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-41 Score=293.49 Aligned_cols=219 Identities=23% Similarity=0.163 Sum_probs=206.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+++++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 114 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGADPVL---RKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFMEAAV 114 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHHHHH
Confidence 67999999999999999999999988644 3777999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCcccccc----------CCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhC
Q 048253 81 KVHVDKIKALLQVNPAWCFAG----------DLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHN 149 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~----------~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g 149 (323)
.|+.+++++|+++|+++ ... +..| ||||+|+..|+.+++++|++..+.+++..|..|+||||+|+..+
T Consensus 115 ~~~~~~~~~Ll~~g~~~-~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~ 193 (285)
T 1wdy_A 115 YGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193 (285)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCS
T ss_pred hCCHHHHHHHHHhCCCc-ccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcc
Confidence 99999999999999988 444 6778 99999999999999999999669999999999999999999999
Q ss_pred c----hhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCC
Q 048253 150 Q----LDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANG 225 (323)
Q Consensus 150 ~----~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g 225 (323)
+ .+++++|+++|++ ++.+|..|+||||+|+..++. +++++|++..+++++.+|..|
T Consensus 194 ~~~~~~~i~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~~g~~~~~~~~~g 253 (285)
T 1wdy_A 194 DDSDVEAITHLLLDHGAD---VNVRGERGKTPLILAVEKKHL-----------------GLVQRLLEQEHIEINDTDSDG 253 (285)
T ss_dssp CTTTHHHHHHHHHHTTCC---SSCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHSSSCCTTCCCTTS
T ss_pred ccchHHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHcCCH-----------------HHHHHHHhccCCCccccCCCC
Confidence 9 8999999999999 999999999999999999999 999999994449999999999
Q ss_pred CchhhhhhhccCCCchhhhHHHH
Q 048253 226 FMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 226 ~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+||+|+|++ .++.+++++|
T Consensus 254 ~t~l~~A~~----~~~~~i~~~L 272 (285)
T 1wdy_A 254 KTALLLAVE----LKLKKIAELL 272 (285)
T ss_dssp CCHHHHHHH----TTCHHHHHHH
T ss_pred CcHHHHHHH----cCcHHHHHHH
Confidence 999999999 9999999998
No 13
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-42 Score=301.57 Aligned_cols=218 Identities=21% Similarity=0.207 Sum_probs=197.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.||||.||..|+.++|++|++.+++++.. |..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 40 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 40 DGAVFLAACSSGDTEEVLRLLERGADINYA---NVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLHAAAS 115 (299)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCCTTCB---CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHcCCCCccc---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHH
Confidence 358999999999999999999999887444 777999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccc--------------------------
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASA-------------------------- 133 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------------------------- 133 (323)
.|+.+++++|+++|+++ +..+..| ||||+|+..++.+++++++...+.+++.
T Consensus 116 ~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 194 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR 194 (299)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred cCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhh
Confidence 99999999999999998 8889999 9999999999999999888755555443
Q ss_pred cccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhc
Q 048253 134 TMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTR 213 (323)
Q Consensus 134 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~ 213 (323)
.+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+. +++++|+++
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d---~~~~d~~g~tpL~~A~~~~~~-----------------~~v~~Ll~~ 254 (299)
T 1s70_B 195 HAKSGGTALHVAAAKGYTEVLKLLIQARYD---VNIKDYDGWTPLHAAAHWGKE-----------------EACRILVEN 254 (299)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHTTTCC---TTCCCTTCCCHHHHHHHTTCH-----------------HHHHHHHHT
T ss_pred hcCCCCCHHHHHHHCCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHhcCCH-----------------HHHHHHHHc
Confidence 456799999999999999999999999999 999999999999999999999 999999999
Q ss_pred ccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 214 TMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 214 g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
| ++++.+|..|.||+++|.+ .....+.+++
T Consensus 255 g-ad~~~~d~~g~t~l~~A~~----~~~~~l~~l~ 284 (299)
T 1s70_B 255 L-CDMEAVNKVGQTAFDVADE----DILGYLEELQ 284 (299)
T ss_dssp T-CCTTCCCTTSCCTTTSCCS----GGGHHHHHHH
T ss_pred C-CCCCCcCCCCCCHHHHHHH----HHHHHHHHHH
Confidence 8 9999999999999999987 4444444444
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=8.1e-42 Score=308.68 Aligned_cols=218 Identities=17% Similarity=0.101 Sum_probs=201.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.||..|+.++|++|++.+.+++. .|..|.||||+|+..|+.+++++|++++++. .+.+|.||||+|+.
T Consensus 20 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~---~~~~g~t~L~~A~~ 93 (364)
T 3ljn_A 20 NMEKIHVAARKGQTDEVRRLIETGVSPTI---QNRFGCTALHLACKFGCVDTAKYLASVGEVH---SLWHGQKPIHLAVM 93 (364)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHHCCHHHHHHHHHHCCCC---CCBTTBCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccc---cCCCCCcHHHHHHHcCCHHHHHHHHHCCCCc---cccCCCCHHHHHHH
Confidence 57999999999999999999999987644 4778999999999999999999999999965 34689999999999
Q ss_pred cCCHHHHHHHHhc----CCccccc-----------------cCCCC-cHHHHHHHhC--CHHHHHHHHHhCCCccccccc
Q 048253 81 KVHVDKIKALLQV----NPAWCFA-----------------GDLDG-SPLHLAAMKG--RIDVLEELFRTRPLAASATMI 136 (323)
Q Consensus 81 ~g~~~~v~~Ll~~----~~~~~~~-----------------~~~~g-t~L~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~ 136 (323)
.|+.+++++|++. |.++ .. ++..| ||||+|+..| +.+++++|++ .+++++..|.
T Consensus 94 ~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~-~ga~~~~~d~ 171 (364)
T 3ljn_A 94 ANKTDLVVALVEGAKERGQMP-ESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ-LGASPTAKDK 171 (364)
T ss_dssp TTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHH-HTCCTTCCCT
T ss_pred cCCHHHHHHHHHhccccCCCH-HHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHH-cCCCCcccCC
Confidence 9999999999999 7776 44 77789 9999999999 9999999999 6899999999
Q ss_pred ccccHHHHHHhhCchhHHHHHHhCCCC--CCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 137 WGETILHLCVKHNQLDALKFLLDNMDD--PQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 137 ~g~t~Lh~A~~~g~~~~v~~Ll~~g~~--~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
.|+||||+|+..|+.+++++|+++|++ ...++.+|..|+||||+|+..|+. ++|++|+++|
T Consensus 172 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~-----------------~~v~~Ll~~g 234 (364)
T 3ljn_A 172 ADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE-----------------DVAMRFVEMG 234 (364)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH-----------------HHHHHHHTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCH-----------------HHHHHHHHcC
Confidence 999999999999999999999998865 233788999999999999999999 9999999998
Q ss_pred cccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 215 MIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 215 ~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
++++.+|..|.||||+|++ .++.+++++|
T Consensus 235 -ad~~~~d~~g~tpL~~A~~----~g~~~~v~~L 263 (364)
T 3ljn_A 235 -IDVNMEDNEHTVPLYLSVR----AAMVLLTKEL 263 (364)
T ss_dssp -CCTTCCCTTSCCHHHHHHH----TCCHHHHHHH
T ss_pred -CCCCCCCCCCCCHHHHHHH----hChHHHHHHH
Confidence 9999999999999999999 9999999999
No 15
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=9.1e-41 Score=283.43 Aligned_cols=218 Identities=21% Similarity=0.127 Sum_probs=204.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.|+|+.|+..|+.+++++|++.+.+++. .+..|.||||+|+..|+.+++++|+++++++....+..|.||||+|+.
T Consensus 9 ~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 9 STWDIVKATQYGIYERCRELVEAGYDVRQ---PDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp GGCCHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHH
T ss_pred cchHHHHHHHcCChHHHHHHHHcCCCcCC---CCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHH
Confidence 57899999999999999999999987644 367799999999999999999999999999866667779999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCc-hhHHHHHH
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQ-LDALKFLL 158 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~-~~~v~~Ll 158 (323)
.|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..+..|.||||+|+..++ .+++++|+
T Consensus 86 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQFGHTSIVAYLIA-KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp HTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 99999999999999999 7788999 99999999999999999999 788999999999999999997776 89999999
Q ss_pred hCCCCCCCCccccc-CCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccC
Q 048253 159 DNMDDPQFLNAEDD-YGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKR 237 (323)
Q Consensus 159 ~~g~~~~~~~~~d~-~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~ 237 (323)
+.|++ ++..+. .|+||||+|+..++. +++++|+++| ++++.+|..|.||+++|++
T Consensus 164 ~~~~~---~~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~--- 219 (240)
T 3eu9_A 164 TFNVS---VNLGDKYHKNTALHWAVLAGNT-----------------TVISLLLEAG-ANVDAQNIKGESALDLAKQ--- 219 (240)
T ss_dssp HTTCC---TTCCCTTTCCCHHHHHHHHTCH-----------------HHHHHHHHHT-CCTTCBCTTSCBHHHHHHH---
T ss_pred hcCCC---cchhhccCCCcHHHHHHHcCCH-----------------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHH---
Confidence 99998 888887 899999999999999 9999999998 9999999999999999999
Q ss_pred CCchhhhHHHH
Q 048253 238 DKKDWEIEDWK 248 (323)
Q Consensus 238 ~~~~~~i~~~L 248 (323)
.++.+++++|
T Consensus 220 -~~~~~~v~~L 229 (240)
T 3eu9_A 220 -RKNVWMINHL 229 (240)
T ss_dssp -TTCHHHHHHH
T ss_pred -cCcHHHHHHH
Confidence 9999999999
No 16
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.1e-40 Score=298.75 Aligned_cols=240 Identities=23% Similarity=0.182 Sum_probs=186.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+|+||.|++.|+.+.|+.|+..... +....|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 24 ~~~~L~~A~~~g~~~~v~~ll~~~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 100 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMALLTPLNV--NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVPLHNACS 100 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTT--TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred cchhHHHHHHcCCHHHHHHHHHhcCC--CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcHHHHHHH
Confidence 35788888888888888888876332 12334667888888888888888888888888887 7888888888888888
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccccc-------------------------
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASAT------------------------- 134 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~------------------------- 134 (323)
.|+.+++++|+++|+++ +..+..| ||||+|+..|+.+++++|++ .+.+++..
T Consensus 101 ~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~ 178 (351)
T 3utm_A 101 YGHYEVTELLLKHGACV-NAMDLWQFTPLHEAASKNRVEVCSLLLS-HGADPTLVNCHGKSAVDMAPTPELRERLTYEFK 178 (351)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCcchHHHhhhhhHHHHHhhhc
Confidence 88888888888888888 7777888 88888888888888888888 55555433
Q ss_pred -----------------------------ccccccHHHHHHhh---CchhHHHHHHhCCCCCCCCcccccCCCcHHHHHH
Q 048253 135 -----------------------------MIWGETILHLCVKH---NQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAV 182 (323)
Q Consensus 135 -----------------------------~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~ 182 (323)
+..|.||||+|+.. +..+++++|+++|++ ++.+|.+|+||||+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~ 255 (351)
T 3utm_A 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---VNEKNKDFMTPLHVAA 255 (351)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC---TTCCCTTCCCHHHHHH
T ss_pred ccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC---cCCcCCCCCCHHHHHH
Confidence 34567888888888 557888888888887 8888888888888888
Q ss_pred hhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHHhhh-------HHHH
Q 048253 183 AVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWKMIG-------WKKM 255 (323)
Q Consensus 183 ~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L~~~-------~~~~ 255 (323)
..|+. +++++|+++| ++++.+|..|+||||+|++ .++.+++++|-.. +..+
T Consensus 256 ~~g~~-----------------~~v~~Ll~~g-a~~n~~d~~g~t~L~~A~~----~~~~~~v~~Ll~~gad~~~~~~~g 313 (351)
T 3utm_A 256 ERAHN-----------------DVMEVLHKHG-AKMNALDSLGQTALHRAAL----AGHLQTCRLLLSYGSDPSIISLQG 313 (351)
T ss_dssp HTTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHH----HTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred HcCCH-----------------HHHHHHHHCC-CCCCCcCCCCCCHHHHHHH----cCcHHHHHHHHHcCCCCCCcCCCC
Confidence 88888 8888888887 7888888888888888888 7888888888332 3455
Q ss_pred HHHHHHHHHHHHHHH
Q 048253 256 RNALMVVASLTATMA 270 (323)
Q Consensus 256 ~~~~~~~~~~~~~~~ 270 (323)
.++++++...+....
T Consensus 314 ~tal~~a~~~~~~~l 328 (351)
T 3utm_A 314 FTAAQMGNEAVQQIL 328 (351)
T ss_dssp CCHHHHSCHHHHHHH
T ss_pred CChhhhhhHHHHHHH
Confidence 666666544444333
No 17
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-40 Score=308.41 Aligned_cols=232 Identities=22% Similarity=0.222 Sum_probs=190.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.||||.|+..|+.+++++|++++.+++. .+..|.||||+|+..|+.+++++|+++++++ +.++..|.||||+|+.
T Consensus 146 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 221 (437)
T 1n11_A 146 GFTPLHVAAKYGKVRVAELLLERDAHPNA---AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP-HSPAWNGYTPLHIAAK 221 (437)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCS-CCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHH
Confidence 57889999999999999999988877643 3666888888888888888888888888887 7778888888888888
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..+..|+||||+|+..|+.+++++|++
T Consensus 222 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 222 QNQVEVARSLLQYGGSA-NAESVQGVTPLHLAAQEGHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 88888888888888887 7777788 88888888888888888888 777888888888888888888888888888888
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCC
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDK 239 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~ 239 (323)
+|++ ++.+|..|+||||+|+..|+. ++|++|+++| ++++.+|..|.||||+|++ .
T Consensus 300 ~g~~---~~~~~~~g~t~L~~A~~~g~~-----------------~~v~~Ll~~g-ad~n~~~~~g~t~L~~A~~----~ 354 (437)
T 1n11_A 300 HGVM---VDATTRMGYTPLHVASHYGNI-----------------KLVKFLLQHQ-ADVNAKTKLGYSPLHQAAQ----Q 354 (437)
T ss_dssp HTCC---TTCCCSSCCCHHHHHHHSSCS-----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHH----T
T ss_pred CCcc---CCCCCCCCCCHHHHHHHcCcH-----------------HHHHHHHhcC-CCCCCCCCCCCCHHHHHHH----C
Confidence 8887 888888888888888888888 8888888877 7888888888888888888 7
Q ss_pred chhhhHHHHhhh-------HHHHHHHHHHHH
Q 048253 240 KDWEIEDWKMIG-------WKKMRNALMVVA 263 (323)
Q Consensus 240 ~~~~i~~~L~~~-------~~~~~~~~~~~~ 263 (323)
++.+++++|-.. +..+.++++++.
T Consensus 355 g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 355 GHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred ChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 777888877332 244555665554
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-41 Score=309.10 Aligned_cols=218 Identities=17% Similarity=0.185 Sum_probs=201.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHh--------ccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCC
Q 048253 1 MKSMLYEAALKGCEPTLLELL--------QQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQF 72 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 72 (323)
|+||||.|+..|+.+++++|+ +.+.+++. .|..|.||||+|+..|+.+++++|+++|+++ +.+|..|.
T Consensus 125 g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~---~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~ 200 (373)
T 2fo1_E 125 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA---MDCDENTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSER 200 (373)
T ss_dssp CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC---CCCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCC
Confidence 689999999999998888876 67877644 4778999999999999999999999999998 89999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcC---CccccccCCCC-cHHHHHHHhC---CHHHHHHHHHhCCCcccc--------cccc
Q 048253 73 SALHIASQKVHVDKIKALLQVN---PAWCFAGDLDG-SPLHLAAMKG---RIDVLEELFRTRPLAASA--------TMIW 137 (323)
Q Consensus 73 tpL~~A~~~g~~~~v~~Ll~~~---~~~~~~~~~~g-t~L~~A~~~g---~~~~v~~Ll~~~~~~~~~--------~~~~ 137 (323)
||||+|+..|+.+++++|++.+ .++ +..+..| ||||+|+..+ +.+++++|++ .+.+++. .|..
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~d~~ 278 (373)
T 2fo1_E 201 SALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNGMTALMIVAHNEGRDQVASAKLLVE-KGAKVDYDGAARKDSEKYK 278 (373)
T ss_dssp CHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTSCCHHHHHHHSCSTTHHHHHHHHHH-HTCCSSCCSGGGTSSSSCC
T ss_pred CHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCCCCHHHHHHHhCCcchHHHHHHHHH-CCCCcccccccccCccccc
Confidence 9999999999999999999988 677 7788999 9999999998 8999999999 5666664 5678
Q ss_pred cccHHHHHHhhCchhHHHHHHhCC-CCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccc
Q 048253 138 GETILHLCVKHNQLDALKFLLDNM-DDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMI 216 (323)
Q Consensus 138 g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~ 216 (323)
|+||||+|+..|+.+++++|++++ ++ ++.+|.+|+||||+|+..|+. ++|++|+++| +
T Consensus 279 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~---~n~~d~~g~TpL~~A~~~g~~-----------------~iv~~Ll~~g-a 337 (373)
T 2fo1_E 279 GRTALHYAAQVSNMPIVKYLVGEKGSN---KDKQDEDGKTPIMLAAQEGRI-----------------EVVMYLIQQG-A 337 (373)
T ss_dssp CCCTHHHHHSSCCHHHHHHHHHHSCCC---TTCCCTTCCCHHHHHHHHTCH-----------------HHHHHHHHTT-C
T ss_pred CCCHHHHHHHhCCHHHHHHHHHhcCCC---ccCcCCCCCCHHHHHHHcCCH-----------------HHHHHHHHcC-C
Confidence 999999999999999999999876 77 999999999999999999999 9999999998 9
Q ss_pred cccccccCCCchhhhhhhccCCCchhhhHHHHh
Q 048253 217 EVNALNANGFMALDTLAQSKRDKKDWEIEDWKM 249 (323)
Q Consensus 217 ~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L~ 249 (323)
+++.+|..|.||+++|+. .++.+++++|.
T Consensus 338 d~~~~d~~g~t~l~~A~~----~g~~~iv~~Ll 366 (373)
T 2fo1_E 338 SVEAVDATDHTARQLAQA----NNHHNIVDIFD 366 (373)
T ss_dssp CSSCCCSSSCCHHHHHHH----TTCHHHHHHHH
T ss_pred CccCCCCCCCCHHHHHHH----cCCHHHHHHHH
Confidence 999999999999999999 99999999993
No 19
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3e-40 Score=305.40 Aligned_cols=247 Identities=25% Similarity=0.251 Sum_probs=218.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.++|++|++++++++. .+..|.||||+|+..|+.+++++|+++++++ +.++.+|+||||+|++
T Consensus 14 g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~---~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 89 (437)
T 1n11_A 14 GLTPLHVASFMGHLPIVKNLLQRGASPNV---SNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPLHCAAR 89 (437)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCSCC---SSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHH
Confidence 78999999999999999999999987643 3677999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +..+..| ||||+|+..|+.+++++|++ .+.+.+..+..|.||||+|+..|+.+++++|++
T Consensus 90 ~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 167 (437)
T 1n11_A 90 IGHTNMVKLLLENNANP-NLATTAGHTPLHIAAREGHVETVLALLE-KEASQACMTKKGFTPLHVAAKYGKVRVAELLLE 167 (437)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 99999999999999998 7888899 99999999999999999999 778888889999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHh------------------hcchHHHHHHHhhccccccccc
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYC------------------HSKWGYVIRFLTTRTMIEVNAL 221 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~------------------~~~~~~~v~~Ll~~g~~~~~~~ 221 (323)
+|++ ++..+..|.||||+|+..++. +++++|.+.+ ..+..+++++|++.| ++++..
T Consensus 168 ~g~~---~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~ 241 (437)
T 1n11_A 168 RDAH---PNAAGKNGLTPLHVAVHHNNL--DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG-GSANAE 241 (437)
T ss_dssp TTCC---TTCCCSSCCCHHHHHHHTTCH--HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCC
T ss_pred CCCC---CCCCCCCCCCHHHHHHHcCCH--HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCC
Confidence 9988 899999999999999999987 7888777653 224568899999888 788888
Q ss_pred ccCCCchhhhhhhccCCCchhhhHHHHhhh-------HHHHHHHHHHHH
Q 048253 222 NANGFMALDTLAQSKRDKKDWEIEDWKMIG-------WKKMRNALMVVA 263 (323)
Q Consensus 222 d~~g~tpl~~A~~~~~~~~~~~i~~~L~~~-------~~~~~~~~~~~~ 263 (323)
+..|.||||+|++ .++.+++++|-.. ...+.++++.++
T Consensus 242 ~~~g~t~L~~A~~----~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~ 286 (437)
T 1n11_A 242 SVQGVTPLHLAAQ----EGHAEMVALLLSKQANGNLGNKSGLTPLHLVA 286 (437)
T ss_dssp CTTCCCHHHHHHH----TTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCHHHHHHH----CCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHH
Confidence 9999999999998 8888898888332 234455666655
No 20
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=290.35 Aligned_cols=218 Identities=16% Similarity=0.096 Sum_probs=177.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCcc--------ccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCC
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQL--------IIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQF 72 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~--------~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~ 72 (323)
|+|+||.|+..|+.+.+..++..++. .......|..|.||||+|+..|+.+++++|++++.++ +.+|.+|+
T Consensus 15 ~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~-~~~~~~g~ 93 (285)
T 3d9h_A 15 VPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAV-NIITADHV 93 (285)
T ss_dssp ---------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCS-CEECTTCC
T ss_pred HHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCC
Confidence 68999999999998888887665432 1122345778999999999999999999999999997 89999999
Q ss_pred cHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCch
Q 048253 73 SALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQL 151 (323)
Q Consensus 73 tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 151 (323)
||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++.. ..|.||||+|+..|+.
T Consensus 94 t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-~~g~t~L~~A~~~g~~ 170 (285)
T 3d9h_A 94 SPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNACVSGSWDCVNLLLQ-HGASVQPE-SDLASPIHEAARRGHV 170 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSSCS-CTTSCHHHHHHHHTCH
T ss_pred CHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCHHHHHHHHHH-CCCCCCCC-CCCCCHHHHHHHcCCH
Confidence 9999999999999999999999999 8889999 99999999999999999999 77777654 4599999999999999
Q ss_pred hHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhh
Q 048253 152 DALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDT 231 (323)
Q Consensus 152 ~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~ 231 (323)
+++++|+++|++ ++.+|..|.||||+|+..++. +++++|++.| ++++. |..|.||||+
T Consensus 171 ~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~-~~~g~t~L~~ 228 (285)
T 3d9h_A 171 ECVNSLIAYGGN---IDHKISHLGTPLYLACENQQR-----------------ACVKKLLESG-ADVNQ-GKGQDSPLHA 228 (285)
T ss_dssp HHHHHHHHTTCC---TTCCBTTTBCHHHHHHHTTCH-----------------HHHHHHHHTT-CCTTC-CBTTBCHHHH
T ss_pred HHHHHHHHCCCC---CCCcCCCCCCHHHHHHHcCcH-----------------HHHHHHHHCC-CCCCC-CCCCCCHHHH
Confidence 999999999998 999999999999999999999 9999999998 89995 8999999999
Q ss_pred hhhccCCCchhhhHHHH
Q 048253 232 LAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 232 A~~~~~~~~~~~i~~~L 248 (323)
|++ .++.+++++|
T Consensus 229 A~~----~~~~~~v~~L 241 (285)
T 3d9h_A 229 VVR----TASEELACLL 241 (285)
T ss_dssp HHH----TTCHHHHHHH
T ss_pred HHH----cCCHHHHHHH
Confidence 999 9999999998
No 21
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=2.8e-40 Score=296.01 Aligned_cols=216 Identities=21% Similarity=0.178 Sum_probs=199.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.++|++|++.+++++.. |..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+.
T Consensus 58 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 133 (351)
T 3utm_A 58 KSTPLHLAAGYNRVRIVQLLLQHGADVHAK---DKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPLHEAAS 133 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCC---CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCcc---CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHH
Confidence 689999999999999999999999887444 778999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCcccc-----------------------------------------------------ccCCCC-c
Q 048253 81 KVHVDKIKALLQVNPAWCF-----------------------------------------------------AGDLDG-S 106 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~-----------------------------------------------------~~~~~g-t 106 (323)
.|+.+++++|+++|+++.. ..+..| |
T Consensus 134 ~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t 213 (351)
T 3utm_A 134 KNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHET 213 (351)
T ss_dssp TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCC
T ss_pred cCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCC
Confidence 9999999999999998621 134567 9
Q ss_pred HHHHHHHh---CCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHh
Q 048253 107 PLHLAAMK---GRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVA 183 (323)
Q Consensus 107 ~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~ 183 (323)
|||+|+.. +..+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+.
T Consensus 214 ~L~~A~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~n~~d~~g~t~L~~A~~ 289 (351)
T 3utm_A 214 ALHCAVASLHPKRKQVAELLLR-KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK---MNALDSLGQTALHRAAL 289 (351)
T ss_dssp HHHHHHHCCSTTHHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHhCccHHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHH
Confidence 99999999 55899999999 8899999999999999999999999999999999999 99999999999999999
Q ss_pred hcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHHhh
Q 048253 184 VKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWKMI 250 (323)
Q Consensus 184 ~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L~~ 250 (323)
.|+. +++++|+++| ++++.+|..|.||+++|.+ ++.++|..
T Consensus 290 ~~~~-----------------~~v~~Ll~~g-ad~~~~~~~g~tal~~a~~--------~~~~~l~~ 330 (351)
T 3utm_A 290 AGHL-----------------QTCRLLLSYG-SDPSIISLQGFTAAQMGNE--------AVQQILSE 330 (351)
T ss_dssp HTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHSCH--------HHHHHHHH
T ss_pred cCcH-----------------HHHHHHHHcC-CCCCCcCCCCCChhhhhhH--------HHHHHHHh
Confidence 9999 9999999998 8999999999999999866 67788743
No 22
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-40 Score=280.26 Aligned_cols=208 Identities=19% Similarity=0.150 Sum_probs=193.8
Q ss_pred CCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHH
Q 048253 12 GCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALL 91 (323)
Q Consensus 12 g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 91 (323)
|+.+++++|++++++++.. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~~g~~~~~~--~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQ--TDRTGETALHLAARYSRSDAAKRLLEASADA-NIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEETTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccc--cCCCCCchHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 6788999999999886543 3567999999999999999999999999998 889999999999999999999999999
Q ss_pred hcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCccc
Q 048253 92 QVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAE 170 (323)
Q Consensus 92 ~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~ 170 (323)
+.++.....++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+
T Consensus 79 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~ 154 (223)
T 2f8y_A 79 RNRATDLDARMHDGTTPLILAARLAVEGMLEDLIN-SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN---KDMQ 154 (223)
T ss_dssp HBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---TTCC
T ss_pred HcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHH-cCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCc
Confidence 99984448888999 99999999999999999999 8899999999999999999999999999999999998 8999
Q ss_pred ccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 171 DDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 171 d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
|..|.||||+|+..++. +++++|+++| ++++.+|..|.||+++|++ .++.+++++|
T Consensus 155 ~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~----~~~~~i~~~L 210 (223)
T 2f8y_A 155 NNREETPLFLAAREGSY-----------------ETAKVLLDHF-ANRDITDHMDRLPRDIAQE----RMHHDIVRLL 210 (223)
T ss_dssp CTTCCCHHHHHHHHTCH-----------------HHHHHHHHTT-CCTTCCCTTCCCHHHHHHH----TTCHHHHHHH
T ss_pred CCCCcCHHHHHHHcCCH-----------------HHHHHHHHcC-CCCccccccCCCHHHHHHH----hcchHHHHHH
Confidence 99999999999999999 9999999998 8999999999999999999 9999999999
No 23
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.1e-38 Score=270.04 Aligned_cols=198 Identities=23% Similarity=0.222 Sum_probs=175.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHhcc-CccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcc----cccCCCCCcHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQ-DQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELA----GELDSNQFSAL 75 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~g~tpL 75 (323)
|+||||.|++.|+.+++++|++. +.+++. .|..|.||||+|+..|+.+++++|+++++++. +.+|..|+|||
T Consensus 3 g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~---~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQ---RGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp TTCHHHHHHHTTCHHHHHHHHTTTCSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcCCCccc---CCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 78999999999999999999998 766533 47789999999999999999999999998753 45677999999
Q ss_pred HHHHhcCCHHHHHHHHhcCCccccccCC-------------CC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccH
Q 048253 76 HIASQKVHVDKIKALLQVNPAWCFAGDL-------------DG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETI 141 (323)
Q Consensus 76 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 141 (323)
|+|+..|+.+++++|+++|+++ +.++. .| ||||+|+..|+.+++++|++ .+++++.+|..|+||
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~ 157 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASV-SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSLGNTV 157 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCH
T ss_pred HHHHHcCCHHHHHHHHhCCCCC-CcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCCH
Confidence 9999999999999999999998 55544 68 99999999999999999999 799999999999999
Q ss_pred HHHHHhhCchhHH----HHHHhCCCCCC---CCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 142 LHLCVKHNQLDAL----KFLLDNMDDPQ---FLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 142 Lh~A~~~g~~~~v----~~Ll~~g~~~~---~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
||+|+..|+.+++ ++|+++|++.. ..+.+|..|+||||+|+..|+. +++++|+++|
T Consensus 158 L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~-----------------~~v~~Ll~~g 220 (232)
T 2rfa_A 158 LHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI-----------------VMFQHLMQKR 220 (232)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH-----------------HHHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH-----------------HHHHHHHhcC
Confidence 9999999999988 99999998731 1168899999999999999999 9999999998
Q ss_pred ccccccc
Q 048253 215 MIEVNAL 221 (323)
Q Consensus 215 ~~~~~~~ 221 (323)
.+....
T Consensus 221 -~~~~~~ 226 (232)
T 2rfa_A 221 -KHIAAA 226 (232)
T ss_dssp -HHC---
T ss_pred -ccchhh
Confidence 455433
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=277.77 Aligned_cols=204 Identities=18% Similarity=0.167 Sum_probs=185.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+++++. .|..|.||||+|+..|+.+++++|+++++++ + .+.+|.||||+|+.
T Consensus 36 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~ 110 (261)
T 2xai_A 36 HVSPLHEACLGGHLSCVKILLKHGAQVNG---VTADWHTPLFNACVSGSWDCVNLLLQHGASV-Q-PESDLASPIHEAAR 110 (261)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-S-CSCTTCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-C-CCCCCCCHHHHHHH
Confidence 68999999999999999999999988644 4778999999999999999999999999987 4 35669999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++. +..|+||||+|+..|+.+++++|++
T Consensus 111 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~ 187 (261)
T 2xai_A 111 RGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLE-SGADVNQ-GKGQDSPLHAVARTASEELACLLMD 187 (261)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHH-HTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHH
T ss_pred cCcHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHhCCHHHHHHHHH-cCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999 8889999 99999999999999999999 6778875 8899999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccc-------ccccccccCCCchhhhh
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTM-------IEVNALNANGFMALDTL 232 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~-------~~~~~~d~~g~tpl~~A 232 (323)
+|++ ++.+|.+|+||||+|+.. . +++++|++++. ++++++|..|.||+|+|
T Consensus 188 ~gad---~~~~d~~g~tpl~~A~~~--~-----------------~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~ 245 (261)
T 2xai_A 188 FGAD---TQAKNAEGKRPVELVPPE--S-----------------PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKI 245 (261)
T ss_dssp TTCC---TTCCCTTSCCGGGGSCTT--C-----------------THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGG
T ss_pred cCCC---CCCcCCCCCChhhhcccc--c-----------------cHHHHHHhccCCccHHHHHHHHHHHHhchhccccC
Confidence 9999 999999999999999854 3 66788887752 45678899999999999
Q ss_pred hh
Q 048253 233 AQ 234 (323)
Q Consensus 233 ~~ 234 (323)
.+
T Consensus 246 ~~ 247 (261)
T 2xai_A 246 TK 247 (261)
T ss_dssp GG
T ss_pred cc
Confidence 98
No 25
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=4e-39 Score=281.68 Aligned_cols=207 Identities=19% Similarity=0.168 Sum_probs=151.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.++|++|++.+++++.. | |.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~ 104 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGALKNLL---E--NEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTALYYAVD 104 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGGGSCC---T--TCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCC---C--CCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcHHHHHHH
Confidence 567788888888888888887777765333 3 777888888878888888888777776 6777777788888887
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC--cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHH
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG--SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLL 158 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g--t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 158 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+.... ..|+||||+|+..|+.+++++|+
T Consensus 105 ~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll 181 (285)
T 3kea_A 105 SGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHAVMLNDVSIVSYFLS-EIPSTFDL-AILLSCIHITIKNGHVDMMILLL 181 (285)
T ss_dssp TTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHHHHTTCHHHHHHHHT-TSCTTCCC-STHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHHHHcCCHHHHHHHHh-CCCccccc-cCCccHHHHHHHcChHHHHHHHH
Confidence 77788888887777777 5555555 77888887778888877777 34333111 26777888888777788888887
Q ss_pred hCCCCCCCCcccccCCCcH-HHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccC
Q 048253 159 DNMDDPQFLNAEDDYGMTI-TQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKR 237 (323)
Q Consensus 159 ~~g~~~~~~~~~d~~g~t~-Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~ 237 (323)
++|++ ++.+|..|+|| ||+|+..++. +++++|+++| ++++.+|. .|+.
T Consensus 182 ~~gad---~n~~~~~g~t~~L~~A~~~~~~-----------------~~v~~Ll~~g-ad~~~~~~-------~a~~--- 230 (285)
T 3kea_A 182 DYMTS---TNTNNSLLFIPDIKLAIDNKDI-----------------EMLQALFKYD-INIYSANL-------ENVL--- 230 (285)
T ss_dssp HHHHH---TCTTCCCBCCTTHHHHHHHTCH-----------------HHHHHHTTSC-BCSTTTTG-------GGGT---
T ss_pred HcCCC---CCcccCCCCChHHHHHHHcCCH-----------------HHHHHHHHcC-CCCCCCCh-------hhhh---
Confidence 77777 77777777776 7777777777 7777777777 77777763 3455
Q ss_pred CCchhhhHHHH
Q 048253 238 DKKDWEIEDWK 248 (323)
Q Consensus 238 ~~~~~~i~~~L 248 (323)
.++.+++++|
T Consensus 231 -~~~~~iv~~L 240 (285)
T 3kea_A 231 -LDDAEIAKMI 240 (285)
T ss_dssp -TTCHHHHHHH
T ss_pred -cCCHHHHHHH
Confidence 6677777777
No 26
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=4e-40 Score=279.84 Aligned_cols=211 Identities=22% Similarity=0.164 Sum_probs=188.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccc-cccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLI-IGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~ 79 (323)
|+||||.|+..|+.+++++|++.+... .+.+..|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 8 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 86 (236)
T 1ikn_D 8 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPLHLAC 86 (236)
T ss_dssp CCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHHHHHH
T ss_pred CCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 789999999999999999999987631 122345777999999999999999999999999998 889999999999999
Q ss_pred hcCCHHHHHHHHhcCCcc-----ccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccccccc-ccccHHHHHHhhCchh
Q 048253 80 QKVHVDKIKALLQVNPAW-----CFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMI-WGETILHLCVKHNQLD 152 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~-----~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~ 152 (323)
..|+.+++++|++.+++. ....+..| ||||+|+..|+.+++++|++ .+.+++..+. .|+||||+|+..|+.+
T Consensus 87 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 87 EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp HHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 999999999999998652 36678889 99999999999999999999 7889999987 9999999999999999
Q ss_pred HHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccccc--ccccCCCchhh
Q 048253 153 ALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVN--ALNANGFMALD 230 (323)
Q Consensus 153 ~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~--~~d~~g~tpl~ 230 (323)
++++|+++|++ ++.+|..|.||||+|+..++. +++++|+++| ++.. ..+.+|.||.+
T Consensus 166 ~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~-----------------~~~~~Ll~~g-a~~~~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 166 LVSLLLKCGAD---VNRVTYQGYSPYQLTWGRPST-----------------RIQQQLGQLT-LENLQMLPESEDEESYD 224 (236)
T ss_dssp HHHHHHTTTCC---SCCCCTTCCCGGGGCTTSSCH-----------------HHHHHHHTTS-CGGGSSCCCCCTTTCCC
T ss_pred HHHHHHHcCCC---CCcccCCCCCHHHHHHccCch-----------------HHHHHHHHcc-hhhhhcCCccchHHHHh
Confidence 99999999999 999999999999999999999 9999999999 7766 88999999998
Q ss_pred hhhh
Q 048253 231 TLAQ 234 (323)
Q Consensus 231 ~A~~ 234 (323)
.+..
T Consensus 225 ~~~~ 228 (236)
T 1ikn_D 225 TESE 228 (236)
T ss_dssp CC--
T ss_pred hhcc
Confidence 8776
No 27
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=4.1e-38 Score=264.82 Aligned_cols=189 Identities=19% Similarity=0.132 Sum_probs=179.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+.+++. .|..|.||||+|+..|+.+++++|+++++...+.++..|.||||+|+.
T Consensus 25 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 101 (223)
T 2f8y_A 25 GETALHLAARYSRSDAAKRLLEASADANI---QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101 (223)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCchHHHHHHcCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHH
Confidence 68999999999999999999999987644 477899999999999999999999999985558999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|++
T Consensus 102 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 179 (223)
T 2f8y_A 102 LAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLD 179 (223)
T ss_dssp HTCHHHHHHHHHTTCCT-TCBCTTSCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHcCCCC-cCcCCCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999998 8888999 99999999999999999999 789999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+|++ ++.+|..|.||||+|+..++. +++++|+++|
T Consensus 180 ~ga~---~~~~~~~g~t~l~~A~~~~~~-----------------~i~~~L~~~g 214 (223)
T 2f8y_A 180 HFAN---RDITDHMDRLPRDIAQERMHH-----------------DIVRLLDEYN 214 (223)
T ss_dssp TTCC---TTCCCTTCCCHHHHHHHTTCH-----------------HHHHHHHHTT
T ss_pred cCCC---CccccccCCCHHHHHHHhcch-----------------HHHHHHHHcC
Confidence 9998 899999999999999999999 9999999998
No 28
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.6e-38 Score=280.59 Aligned_cols=216 Identities=22% Similarity=0.163 Sum_probs=191.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCcccccc------------------------------ccCCCCCCCHHHHHHHcCCH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGR------------------------------VGVNCLSEFPLHAAALLGHV 50 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~------------------------------~~~~~~g~t~Lh~A~~~g~~ 50 (323)
|+||||.||..|+.++|++|++++++++.. ...|..|.||||+|+..|+.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~ 138 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV 138 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCH
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcH
Confidence 689999999999999999999998765322 23567799999999999999
Q ss_pred HHHHHHHHhCCCcc---------cccCCCCCcHHHHHHhcCCHHHHHHHHh-cCCccccccCCCC-cHHHHHHHhCC---
Q 048253 51 DFEGEIRRQKPELA---------GELDSNQFSALHIASQKVHVDKIKALLQ-VNPAWCFAGDLDG-SPLHLAAMKGR--- 116 (323)
Q Consensus 51 ~~v~~Ll~~~~~~~---------~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~~g-t~L~~A~~~g~--- 116 (323)
+++++|+++++++. ...+..|.||||+|++.|+.+++++|++ .|+++ +.++..| |++|.++..+.
T Consensus 139 ~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~ 217 (337)
T 4g8k_A 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSD 217 (337)
T ss_dssp HHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTT
T ss_pred HHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCccc
Confidence 99999999998762 2345679999999999999999999996 58888 8889999 99998887654
Q ss_pred -HHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhC-CCCCCCCcccccCCCcHHHHHHhhcchhhhHHHH
Q 048253 117 -IDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDN-MDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVEL 194 (323)
Q Consensus 117 -~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 194 (323)
.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|++. |++ +|.+|.+|+||||+|+..|+.
T Consensus 218 ~~~i~~lLl~-~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~---vn~~d~~G~TpL~~A~~~g~~------- 286 (337)
T 4g8k_A 218 VEAITHLLLD-HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE---INDTDSDGKTALLLAVELKLK------- 286 (337)
T ss_dssp HHHHHHHHHH-TTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC---TTCBCTTSCBHHHHHHHTTCH-------
T ss_pred HHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc---ccCcCCCCCCHHHHHHHcCCH-------
Confidence 467888998 8999999999999999999999999999999985 677 999999999999999999999
Q ss_pred HHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 195 VEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 195 l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
++|++|+++| +++|. .+||++|++ .++.+++++|
T Consensus 287 ----------~iv~~Ll~~G-Ad~n~-----~~~L~~A~~----~~~~~iv~~L 320 (337)
T 4g8k_A 287 ----------KIAELLCKRG-ASTDC-----GDLVMTARR----NYDHSLVKVL 320 (337)
T ss_dssp ----------HHHHHHHTTS-CSSTT-----CCHHHHHHH----TTCHHHHHHH
T ss_pred ----------HHHHHHHHCC-CCCCC-----CCHHHHHHH----cCCHHHHHHH
Confidence 9999999998 88875 469999999 8999999998
No 29
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.3e-38 Score=276.98 Aligned_cols=190 Identities=22% Similarity=0.215 Sum_probs=176.5
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc--ccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKPEL--AGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLH 109 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~ 109 (323)
.|..|.||||+|+..|+.+++++|++++++. ++.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~ 83 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTALH 83 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 4777999999999999999999999998872 4889999999999999999999999999999999 8889999 9999
Q ss_pred HHHHhCCHHHHHHHHHhCC----------------------------------------------CcccccccccccHHH
Q 048253 110 LAAMKGRIDVLEELFRTRP----------------------------------------------LAASATMIWGETILH 143 (323)
Q Consensus 110 ~A~~~g~~~~v~~Ll~~~~----------------------------------------------~~~~~~~~~g~t~Lh 143 (323)
+|+..|+.+++++|++... .+++..+..|+||||
T Consensus 84 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~ 163 (282)
T 1oy3_D 84 LACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLH 163 (282)
T ss_dssp HHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHH
T ss_pred HHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHH
Confidence 9999999999999998332 236677889999999
Q ss_pred HHHhhCchhHHHHHHhCCCCCCCCcccccC-CCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccc
Q 048253 144 LCVKHNQLDALKFLLDNMDDPQFLNAEDDY-GMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALN 222 (323)
Q Consensus 144 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~-g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d 222 (323)
+|+..|+.+++++|+++|++ ++.++.. |+||||+|+..|+. +++++|+++| ++++.+|
T Consensus 164 ~A~~~g~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~~~~~~-----------------~~v~~Ll~~g-ad~~~~d 222 (282)
T 1oy3_D 164 VAVIHKDAEMVRLLRDAGAD---LNKPEPTCGRTPLHLAVEAQAA-----------------SVLELLLKAG-ADPTARM 222 (282)
T ss_dssp HHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHHHTTCH-----------------HHHHHHHHTT-CCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCC---CCCCCCCCCcCHHHHHHHcCCH-----------------HHHHHHHHcC-CCCcccc
Confidence 99999999999999999998 8888854 99999999999999 9999999998 9999999
Q ss_pred cCCCchhhhhhhccCCCchhhhHHHH
Q 048253 223 ANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 223 ~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
..|+||||+|+. .++.+++++|
T Consensus 223 ~~g~tpL~~A~~----~~~~~~v~~L 244 (282)
T 1oy3_D 223 YGGRTPLGSALL----RPNPILARLL 244 (282)
T ss_dssp TTSCCHHHHHHT----SSCHHHHHHH
T ss_pred cCCCCHHHHHHH----cCCcHHHHHH
Confidence 999999999999 9999999999
No 30
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1e-38 Score=288.39 Aligned_cols=215 Identities=18% Similarity=0.094 Sum_probs=194.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHh----CCCcccc----------
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQ----KPELAGE---------- 66 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~~---------- 66 (323)
|+||||.|+..|+.++|++|++.+++.+ +..|.||||+|+..|+.+++++|++. +.++ +.
T Consensus 53 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~-----~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~~~~~~ 126 (364)
T 3ljn_A 53 GCTALHLACKFGCVDTAKYLASVGEVHS-----LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNECDEREV 126 (364)
T ss_dssp CCCHHHHHHHHCCHHHHHHHHHHCCCCC-----CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCCCCCCE
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCCcc-----ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhcchHhh
Confidence 6899999999999999999999998542 23599999999999999999999999 7666 54
Q ss_pred -------cCCCCCcHHHHHHhcC--CHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCc-----c
Q 048253 67 -------LDSNQFSALHIASQKV--HVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLA-----A 131 (323)
Q Consensus 67 -------~~~~g~tpL~~A~~~g--~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~-----~ 131 (323)
+|..|.||||+|+..| +.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+.+ +
T Consensus 127 ~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~ 204 (364)
T 3ljn_A 127 NEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP-TAKDKADETPLMRAMEFRNREALDLMMD-TVPSKSSLRL 204 (364)
T ss_dssp EEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HCSCSSSCCT
T ss_pred hhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHh-cccccccccc
Confidence 8889999999999999 999999999999999 8889999 99999999999999999999 5555 8
Q ss_pred cccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHh
Q 048253 132 SATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLT 211 (323)
Q Consensus 132 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll 211 (323)
+..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+. +++++|+
T Consensus 205 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~g~~-----------------~~v~~Ll 264 (364)
T 3ljn_A 205 DYANKQGNSHLHWAILINWEDVAMRFVEMGID---VNMEDNEHTVPLYLSVRAAMV-----------------LLTKELL 264 (364)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTCCH-----------------HHHHHHH
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHhChH-----------------HHHHHHH
Confidence 99999999999999999999999999999999 999999999999999999999 9999999
Q ss_pred hcccccccc------------cccCCCchhhhhhhccCCCc-hhhhHHHH
Q 048253 212 TRTMIEVNA------------LNANGFMALDTLAQSKRDKK-DWEIEDWK 248 (323)
Q Consensus 212 ~~g~~~~~~------------~d~~g~tpl~~A~~~~~~~~-~~~i~~~L 248 (323)
+++ ++++. .+..|+||++.|+. .+ ..++.++|
T Consensus 265 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~----~~~~~~v~~ll 309 (364)
T 3ljn_A 265 QKT-DVFLIQACPYHNGTTVLPDRVVWLDFVPAAA----DPSKQEVLQLL 309 (364)
T ss_dssp HHS-CHHHHHTCTTBSSSSBCGGGCCCCTTSCSSC----CHHHHHHHHHH
T ss_pred HcC-CchhhhcCcccCcccccccccccccchhhhh----ccCHHHHHHHH
Confidence 987 55433 56788999999988 66 44556666
No 31
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.3e-38 Score=265.55 Aligned_cols=190 Identities=21% Similarity=0.168 Sum_probs=179.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+.+++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+.
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 115 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVPVND---KDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPLHYAAS 115 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCCCCC---cCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 68999999999999999999999987644 4778999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+.+++++|++
T Consensus 116 ~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 193 (231)
T 3aji_A 116 KNRHEIAVMLLEGGANP-DAKDHYDATAMHRAAAKGNLKMVHILLF-YKASTNIQDTEGNTPLHLACDEERVEEAKFLVT 193 (231)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCccccCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999998 7888999 99999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccc
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIE 217 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~ 217 (323)
+|++ ++.+|..|.||||+|+..++. +++++|.+++ ++
T Consensus 194 ~ga~---~~~~~~~g~t~l~~A~~~~~~-----------------~i~~lL~~~~-a~ 230 (231)
T 3aji_A 194 QGAS---IYIENKEEKTPLQVAKGGLGL-----------------ILKRLAEGEE-AS 230 (231)
T ss_dssp TTCC---SCCCCTTSCCHHHHSCHHHHH-----------------HHHHHHHHHH-HC
T ss_pred CCCC---CCCCCCCCCCHHHHHHhhHHH-----------------HHHHHHcccc-cc
Confidence 9999 899999999999999999998 9999998876 44
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.4e-38 Score=268.45 Aligned_cols=189 Identities=19% Similarity=0.132 Sum_probs=178.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.++|++|++.+++++. .|..|.||||+|+..|+.+++++|+++++..++.++..|.||||+|+.
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 133 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASADANI---QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 133 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHH
Confidence 68999999999999999999999988744 377899999999999999999999999985558999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|++
T Consensus 134 ~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~ 211 (253)
T 1yyh_A 134 LAVEGMLEDLINSHADV-NAVDDLGKSALHWAAAVNNVDAAVVLLK-NGANKDMQNNREETPLFLAAREGSYETAKVLLD 211 (253)
T ss_dssp HTCSSHHHHHHHTTCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cChHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 99999999999999999 8889999 99999999999999999999 899999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 160 NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+|++ ++.+|..|+||||+|+..|+. +++++|....
T Consensus 212 ~ga~---~~~~d~~g~tpl~~A~~~g~~-----------------~i~~~l~~~~ 246 (253)
T 1yyh_A 212 HFAN---RDITDHMDRLPRDIAQERMHH-----------------DIVRLLDLEH 246 (253)
T ss_dssp TTCC---TTCCCTTCCCHHHHHHHTTCH-----------------HHHHHHHC--
T ss_pred cCCC---ccccccCCCCHHHHHHHcCCH-----------------HHHHHHHHHh
Confidence 9999 899999999999999999999 9999998765
No 33
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-39 Score=295.32 Aligned_cols=218 Identities=14% Similarity=0.115 Sum_probs=194.5
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCC-CCCCCHHHHHHHcCCHHHHHHHH--------HhCCCcccccCCCC
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVN-CLSEFPLHAAALLGHVDFEGEIR--------RQKPELAGELDSNQ 71 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~g~t~Lh~A~~~g~~~~v~~Ll--------~~~~~~~~~~~~~g 71 (323)
|+||||.|+..+. +++++|+... ++. .| ..|+||||+|+..|+.+++++|+ +.|+++ +.+|..|
T Consensus 94 g~t~L~~Aa~~~~-~~~~~L~~~~--~n~---~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v-n~~d~~g 166 (373)
T 2fo1_E 94 SPIKLHTEAAGSY-AITEPITRES--VNI---IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV-NAMDCDE 166 (373)
T ss_dssp CCCHHHHHHHSSS-CCCSCCSTTT--TTT---CCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT-TCCCTTS
T ss_pred CccHHHHHhcCCc-hHHHHhcccc--ccc---cCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC-cCCCCCC
Confidence 6899999999665 7888876643 222 34 56999999999999998888776 788887 9999999
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCC---CcccccccccccHHHHHHh
Q 048253 72 FSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRP---LAASATMIWGETILHLCVK 147 (323)
Q Consensus 72 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~~g~t~Lh~A~~ 147 (323)
.||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+ .+++..|..|.||||+|+.
T Consensus 167 ~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~~~~~d~~g~t~L~~A~~ 244 (373)
T 2fo1_E 167 NTPLMLAVLARRRRLVAYLMKAGADP-TIYNKSERSALHQAAANRDFGMMVYMLN-STKLKGDIEELDRNGMTALMIVAH 244 (373)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCHHHHHHHTT-SHHHHHTTSCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHHcChHHHHHHHHHCCCCC-cccCCCCCCHHHHHHHCCCHHHHHHHHh-cCccccChhhcCCCCCCHHHHHHH
Confidence 99999999999999999999999999 7889999 99999999999999999999 54 6888999999999999999
Q ss_pred hC---chhHHHHHHhCCCCCCC-----CcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccccc
Q 048253 148 HN---QLDALKFLLDNMDDPQF-----LNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVN 219 (323)
Q Consensus 148 ~g---~~~~v~~Ll~~g~~~~~-----~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~ 219 (323)
.+ +.+++++|+++|++... .+.+|..|.||||+|+..|+. ++|++|+++++++++
T Consensus 245 ~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~-----------------~~v~~Ll~~~~~~~n 307 (373)
T 2fo1_E 245 NEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM-----------------PIVKYLVGEKGSNKD 307 (373)
T ss_dssp SCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH-----------------HHHHHHHHHSCCCTT
T ss_pred hCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH-----------------HHHHHHHHhcCCCcc
Confidence 98 89999999999988321 123678999999999999999 999999998779999
Q ss_pred ccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 220 ALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 220 ~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
.+|..|.||||+|+. .++.+++++|
T Consensus 308 ~~d~~g~TpL~~A~~----~g~~~iv~~L 332 (373)
T 2fo1_E 308 KQDEDGKTPIMLAAQ----EGRIEVVMYL 332 (373)
T ss_dssp CCCTTCCCHHHHHHH----HTCHHHHHHH
T ss_pred CcCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 999999999999999 9999999999
No 34
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.9e-37 Score=255.47 Aligned_cols=189 Identities=21% Similarity=0.191 Sum_probs=175.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCc-cccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQ-LIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~ 79 (323)
+.||||.|+..|+.+.++.|++.++ ++ +..|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~ 80 (201)
T 3hra_A 5 EVGALLEAANQRDTKKVKEILQDTTYQV---DEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAG 80 (201)
T ss_dssp CTTHHHHHHHTTCHHHHHHHHTCTTCCT---TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cccHHHHHHHhccHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH
Confidence 5699999999999999999999987 44 334777999999999999999999999999998 889999999999999
Q ss_pred hcCCHHHHHHHHhc-CCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCc-----hh
Q 048253 80 QKVHVDKIKALLQV-NPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQ-----LD 152 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~-~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~-----~~ 152 (323)
..|+.+++++|++. +.++ +.++..| ||||+|+..|+.+++++|++..+.+++..|..|+||||+|+..++ .+
T Consensus 81 ~~~~~~~~~~Ll~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~ 159 (201)
T 3hra_A 81 AQGRTEILAYMLKHATPDL-NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQD 159 (201)
T ss_dssp HTTCHHHHHHHHHHSCCCT-TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHH
T ss_pred HcCCHHHHHHHHhccCccc-ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHH
Confidence 99999999999955 4455 8889999 999999999999999999996669999999999999999999987 99
Q ss_pred HHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 153 ALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 153 ~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
++++|+++|++ ++.+|..|+||||+|+..|+. +++++|+++|
T Consensus 160 ~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~-----------------~~~~~Ll~~G 201 (201)
T 3hra_A 160 IVKLLMENGAD---QSIKDNSGRTAMDYANQKGYT-----------------EISKILAQYN 201 (201)
T ss_dssp HHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH-----------------HHHHHHHTCC
T ss_pred HHHHHHHCCCC---CCccCCCCCCHHHHHHHcCCH-----------------hHHHHHHhcC
Confidence 99999999999 899999999999999999999 9999999875
No 35
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=4.4e-37 Score=260.90 Aligned_cols=190 Identities=23% Similarity=0.255 Sum_probs=181.7
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHH
Q 048253 32 GVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHL 110 (323)
Q Consensus 32 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~ 110 (323)
..|..|.||||+|+..|+.+++++|++++.++ +..+..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 83 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGANI-DTCSEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCLHL 83 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHHHH
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCCc-CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHHHH
Confidence 34777999999999999999999999999998 889999999999999999999999999999998 7888999 99999
Q ss_pred HHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhh
Q 048253 111 AAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQN 190 (323)
Q Consensus 111 A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~ 190 (323)
|+..|+.+++++|++..+.+++..+..|.||||+|+..++.+++++|+++|++ ++.+|..|.||||+|+..|+.
T Consensus 84 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~--- 157 (237)
T 3b7b_A 84 AAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD---INIRDNEENICLHWAAFSGCV--- 157 (237)
T ss_dssp HHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHCCH---
T ss_pred HHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCccCCCCCCHHHHHHHCCCH---
Confidence 99999999999999965689999999999999999999999999999999998 899999999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 191 LVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 191 ~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+++++|++.| ++++.+|..|.||||+|++ .++.+++++|
T Consensus 158 --------------~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~L 196 (237)
T 3b7b_A 158 --------------DIAEILLAAK-CDLHAVNIHGDSPLHIAAR----ENRYDCVVLF 196 (237)
T ss_dssp --------------HHHHHHHTTT-CCTTCCCTTCCCHHHHHHH----TTCHHHHHHH
T ss_pred --------------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHH----hCCHhHHHHH
Confidence 9999999998 8999999999999999999 8999999998
No 36
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.3e-37 Score=260.95 Aligned_cols=186 Identities=18% Similarity=0.227 Sum_probs=172.2
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-CCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccc----cccCCCC-cHHH
Q 048253 36 LSEFPLHAAALLGHVDFEGEIRRQ-KPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWC----FAGDLDG-SPLH 109 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~----~~~~~~g-t~L~ 109 (323)
.|+||||+|+..|+.+++++|++. +.++ +.+|..|+||||+|+..|+.+++++|++.|+++. ..++..| ||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~ 80 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEV-HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALH 80 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCc-ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHH
Confidence 489999999999999999999998 7776 8999999999999999999999999999998863 3456688 9999
Q ss_pred HHHHhCCHHHHHHHHHhCCCccccccc-------------ccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCc
Q 048253 110 LAAMKGRIDVLEELFRTRPLAASATMI-------------WGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMT 176 (323)
Q Consensus 110 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t 176 (323)
+|+..|+.+++++|++ .+.+++..+. .|+||||+|+..|+.+++++|+++|++ ++.+|..|+|
T Consensus 81 ~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~t 156 (232)
T 2rfa_A 81 IAVINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGAD---IRAQDSLGNT 156 (232)
T ss_dssp HHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCC
T ss_pred HHHHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCC
Confidence 9999999999999999 7888887765 799999999999999999999999999 9999999999
Q ss_pred HHHHHHhhcchhhhHHHHHHHHhhcchHHHH----HHHhhcccccc------cccccCCCchhhhhhhccCCCchhhhHH
Q 048253 177 ITQLAVAVKLCFQNLVELVEEYCHSKWGYVI----RFLTTRTMIEV------NALNANGFMALDTLAQSKRDKKDWEIED 246 (323)
Q Consensus 177 ~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v----~~Ll~~g~~~~------~~~d~~g~tpl~~A~~~~~~~~~~~i~~ 246 (323)
|||+|+..++. +++ ++|+++| +++ +.+|..|+||||+|++ .++.++++
T Consensus 157 ~L~~A~~~~~~-----------------~~~~~i~~~Ll~~g-~~~~~~~~~~~~~~~g~tpl~~A~~----~g~~~~v~ 214 (232)
T 2rfa_A 157 VLHILILQPNK-----------------TFACQMYNLLLSYD-GGDHLKSLELVPNNQGLTPFKLAGV----EGNIVMFQ 214 (232)
T ss_dssp HHHHHHTCSCH-----------------HHHHHHHHHHHHTT-CSCSSCCGGGCCCTTSCCHHHHHHH----HTCHHHHH
T ss_pred HHHHHHHcCCh-----------------HHHHHHHHHHHhcC-CchhhhhhhccCCCCCCCHHHHHHH----cCCHHHHH
Confidence 99999999998 777 9999998 677 6899999999999999 99999999
Q ss_pred HH
Q 048253 247 WK 248 (323)
Q Consensus 247 ~L 248 (323)
+|
T Consensus 215 ~L 216 (232)
T 2rfa_A 215 HL 216 (232)
T ss_dssp HH
T ss_pred HH
Confidence 98
No 37
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.5e-37 Score=254.97 Aligned_cols=188 Identities=21% Similarity=0.246 Sum_probs=178.6
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHH
Q 048253 35 CLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAM 113 (323)
Q Consensus 35 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~ 113 (323)
..+.||||.|+..|+.++++.|++.+...++.+|..|+||||+|++.|+.+++++|+++|+++ +.++..| ||||+|+.
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 81 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYAGA 81 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 458999999999999999999999988445899999999999999999999999999999999 8889999 99999999
Q ss_pred hCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCC-CCCCCCcccccCCCcHHHHHHhhcc-----h
Q 048253 114 KGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNM-DDPQFLNAEDDYGMTITQLAVAVKL-----C 187 (323)
Q Consensus 114 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~t~Lh~A~~~~~-----~ 187 (323)
.|+.+++++|++..+.+++..|..|.||||+|+..|+.+++++|+++| ++ ++.+|..|+||||+|+..++ .
T Consensus 82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~ 158 (201)
T 3hra_A 82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRED---IDFQNDFGYTALIEAVGLREGNQLYQ 158 (201)
T ss_dssp TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCC---TTCCCTTSCCHHHHHHHSSCCSHHHH
T ss_pred cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCC---cCCCCCCCCCHHHHHHHhccchhhHH
Confidence 999999999997688899999999999999999999999999999998 77 89999999999999999887 6
Q ss_pred hhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 188 FQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 188 ~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+++++|+++| ++++.+|..|.||+|+|++ .++.+++++|
T Consensus 159 -----------------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~----~~~~~~~~~L 197 (201)
T 3hra_A 159 -----------------DIVKLLMENG-ADQSIKDNSGRTAMDYANQ----KGYTEISKIL 197 (201)
T ss_dssp -----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHH----HTCHHHHHHH
T ss_pred -----------------HHHHHHHHCC-CCCCccCCCCCCHHHHHHH----cCCHhHHHHH
Confidence 9999999998 9999999999999999999 9999999998
No 38
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=6e-37 Score=258.40 Aligned_cols=187 Identities=22% Similarity=0.247 Sum_probs=176.0
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcC--CccccccCCCC-cHHHHHHH
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVN--PAWCFAGDLDG-SPLHLAAM 113 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g-t~L~~A~~ 113 (323)
|+||||+|+..|+.+++++|++.+++..+.+|..|+||||+|+..|+.+++++|++.| .++....+..| ||||+|+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~ 81 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 81 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 7899999999999999999999999987779999999999999999999999999999 66633377889 99999999
Q ss_pred hCCHHHHHHHHHhCC--CcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhH
Q 048253 114 KGRIDVLEELFRTRP--LAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNL 191 (323)
Q Consensus 114 ~g~~~~v~~Ll~~~~--~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~ 191 (323)
.|+.+++++|++ .+ .+++..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.
T Consensus 82 ~~~~~~~~~Ll~-~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~---- 153 (228)
T 2dzn_A 82 VGNLEVVKSLYD-RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS---VRIKDKFNQIPLHRAASVGSL---- 153 (228)
T ss_dssp HCCHHHHHHHHS-SSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCH----
T ss_pred cCCHHHHHHHHh-CCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCH----
Confidence 999999999999 55 88899999999999999999999999999999998 999999999999999999999
Q ss_pred HHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 192 VELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 192 ~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+++++|++.|.++++.+|..|+||||+|+. .++.+++++|
T Consensus 154 -------------~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~----~~~~~~v~~L 193 (228)
T 2dzn_A 154 -------------KLIELLCGLGKSAVNWQDKQGWTPLFHALA----EGHGDAAVLL 193 (228)
T ss_dssp -------------HHHHHHHTTTCCCSCCCCTTSCCHHHHHHH----TTCHHHHHHH
T ss_pred -------------HHHHHHHhcCcccccCcCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 999999999878999999999999999999 9999999998
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.7e-37 Score=270.05 Aligned_cols=204 Identities=14% Similarity=0.048 Sum_probs=182.7
Q ss_pred HHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHH
Q 048253 9 ALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIK 88 (323)
Q Consensus 9 ~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~ 88 (323)
+...+.+.+..++..+ ++ ...|..|.||||+|+..|+.+++++|+++++++ +.+ +|+||||+|+..|+.++++
T Consensus 7 i~~~~~~~v~~lL~~~-~~---~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~--~g~t~L~~A~~~g~~~~v~ 79 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK-DT---FKADVHGHSASYYAIADNNVRLVCTLLNAGALK-NLL--ENEFPLHQAATLEDTKIVK 79 (285)
T ss_dssp GGGCCHHHHHHHHHST-TT---TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGG-SCC--TTCCHHHHHTTSSSCHHHH
T ss_pred HHhcCHHHHHHHHHhC-CC---CccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCC--CCCCHHHHHHHcCCHHHHH
Confidence 3445555555555544 23 345778999999999999999999999999987 555 5999999999999999999
Q ss_pred HHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccccccccc-ccHHHHHHhhCchhHHHHHHhCCCCCCC
Q 048253 89 ALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWG-ETILHLCVKHNQLDALKFLLDNMDDPQF 166 (323)
Q Consensus 89 ~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~ 166 (323)
+|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+++++..+..| .||||+|+..|+.+++++|+++|++
T Consensus 80 ~Ll~~ga~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~--- 154 (285)
T 3kea_A 80 ILLFSGLDD-SQFDDKGNTALYYAVDSGNMQTVKLFVK-KNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS--- 154 (285)
T ss_dssp HHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCT---
T ss_pred HHHHCCCCC-CCcCCCCCcHHHHHHHcCCHHHHHHHHh-cCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCc---
Confidence 999999998 7889999 99999999999999999999 689999999999 8999999999999999999999976
Q ss_pred Cccccc-CCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCch-hhhhhhccCCCchhhh
Q 048253 167 LNAEDD-YGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMA-LDTLAQSKRDKKDWEI 244 (323)
Q Consensus 167 ~~~~d~-~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tp-l~~A~~~~~~~~~~~i 244 (323)
. .+. .|.||||+|+..|+. +++++|+++| ++++.+|..|.|| ||+|++ .++.++
T Consensus 155 ~--~~~~~g~t~L~~A~~~g~~-----------------~~v~~Ll~~g-ad~n~~~~~g~t~~L~~A~~----~~~~~~ 210 (285)
T 3kea_A 155 T--FDLAILLSCIHITIKNGHV-----------------DMMILLLDYM-TSTNTNNSLLFIPDIKLAID----NKDIEM 210 (285)
T ss_dssp T--CCCSTHHHHHHHHHHTTCH-----------------HHHHHHHHHH-HHTCTTCCCBCCTTHHHHHH----HTCHHH
T ss_pred c--ccccCCccHHHHHHHcChH-----------------HHHHHHHHcC-CCCCcccCCCCChHHHHHHH----cCCHHH
Confidence 3 333 899999999999999 9999999998 9999999999998 999999 999999
Q ss_pred HHHH
Q 048253 245 EDWK 248 (323)
Q Consensus 245 ~~~L 248 (323)
+++|
T Consensus 211 v~~L 214 (285)
T 3kea_A 211 LQAL 214 (285)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9999
No 40
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.1e-36 Score=258.80 Aligned_cols=189 Identities=22% Similarity=0.222 Sum_probs=175.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHH----hCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRR----QKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SP 107 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~ 107 (323)
+|.+|.||||+|+..|+.+++++|++ .+.++ +.+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 82 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-DIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQTA 82 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCC-CcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCCCH
Confidence 47779999999999999999999997 56666 889999999999999999999999999999998 7888999 99
Q ss_pred HHHHHHhCCHHHHHHHHHhCC---CcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccc-cCCCcHHHHHHh
Q 048253 108 LHLAAMKGRIDVLEELFRTRP---LAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAED-DYGMTITQLAVA 183 (323)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~~~~---~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~t~Lh~A~~ 183 (323)
||+|+..|+.+++++|++... .+++..+..|+||||+|+..|+.+++++|+++|++ ++.++ ..|.||||+|+.
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD---IDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC---cccccccCCCcHHHHHHH
Confidence 999999999999999999543 27888899999999999999999999999999998 88888 889999999999
Q ss_pred hcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 184 VKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 184 ~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
.++. +++++|+++| ++++.+|..|.||||+|+. .++.+++++|
T Consensus 160 ~~~~-----------------~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~L 202 (241)
T 1k1a_A 160 NNSL-----------------SMVQLLLQHG-ANVNAQMYSGSSALHSASG----RGLLPLVRTL 202 (241)
T ss_dssp TTCH-----------------HHHHHHHHTT-CCTTCBCTTSCBHHHHHHH----HTCHHHHHHH
T ss_pred cCCH-----------------HHHHHHHHcC-CCCCCcCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 9999 9999999998 8999999999999999999 8999999998
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=9.5e-38 Score=268.36 Aligned_cols=196 Identities=22% Similarity=0.209 Sum_probs=173.4
Q ss_pred CCcHHHHHHHhCCHH----HHHHHhccCccccccc-cCCCCCCCHHHHHHHc---CCHHHHHHHHHhCCCccc-------
Q 048253 1 MKSMLYEAALKGCEP----TLLELLQQDQLIIGRV-GVNCLSEFPLHAAALL---GHVDFEGEIRRQKPELAG------- 65 (323)
Q Consensus 1 g~t~L~~A~~~g~~~----~v~~Ll~~~~~~~~~~-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~------- 65 (323)
|+||||.|+..|+.+ ++++|++.+.+++... ..|..|.||||+|+.. |+.+++++|++.++++..
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 789999999999997 6677777888765400 1377799999999999 999999999999876521
Q ss_pred ---ccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCC-------------C-cHHHHHHHhCCHHHHHHHHHh--
Q 048253 66 ---ELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLD-------------G-SPLHLAAMKGRIDVLEELFRT-- 126 (323)
Q Consensus 66 ---~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g-t~L~~A~~~g~~~~v~~Ll~~-- 126 (323)
.+|..|+||||+|+..|+.+++++|+++|+++ +.++.. | ||||+|+..|+.+++++|++.
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~ 160 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPH 160 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSS
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccc
Confidence 23478999999999999999999999999998 667665 8 999999999999999999996
Q ss_pred CCCcccccccccccHHHHHHh--hCchh-------HHHHHHhCCCCCCCC-------cccccCCCcHHHHHHhhcchhhh
Q 048253 127 RPLAASATMIWGETILHLCVK--HNQLD-------ALKFLLDNMDDPQFL-------NAEDDYGMTITQLAVAVKLCFQN 190 (323)
Q Consensus 127 ~~~~~~~~~~~g~t~Lh~A~~--~g~~~-------~v~~Ll~~g~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~~~ 190 (323)
.+++++.+|..|+||||+|+. .++.+ ++++|+++|++ + +.+|..|+||||+|+..|+.
T Consensus 161 ~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~--- 234 (256)
T 2etb_A 161 QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR---LCPTVQLEEISNHQGLTPLKLAAKEGKI--- 234 (256)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HSTTCCGGGCCCTTSCCHHHHHHHTTCH---
T ss_pred cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC---cccccccccccCCCCCCHHHHHHHhCCH---
Confidence 689999999999999999999 78888 99999999988 6 89999999999999999999
Q ss_pred HHHHHHHHhhcchHHHHHHHhhcccccc
Q 048253 191 LVELVEEYCHSKWGYVIRFLTTRTMIEV 218 (323)
Q Consensus 191 ~~~~l~~~~~~~~~~~v~~Ll~~g~~~~ 218 (323)
+++++|+++| .+.
T Consensus 235 --------------~~v~~Ll~~g-~~~ 247 (256)
T 2etb_A 235 --------------EIFRHILQRE-FSG 247 (256)
T ss_dssp --------------HHHHHHHHHH-HHH
T ss_pred --------------HHHHHHHhCC-CCC
Confidence 9999999988 444
No 42
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=6.4e-38 Score=266.19 Aligned_cols=190 Identities=24% Similarity=0.231 Sum_probs=172.3
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCC---cccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKPE---LAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPL 108 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~---~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L 108 (323)
+|.+|.||||+|+..|+.+++++|++.+.. .++.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| |||
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 82 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGNTPL 82 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCCCHH
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHH
Confidence 467799999999999999999999988763 24889999999999999999999999999999999 8889999 999
Q ss_pred HHHHHhCCHHHHHHHHHhCC-----CcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCccccc-CCCcHHHHHH
Q 048253 109 HLAAMKGRIDVLEELFRTRP-----LAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDD-YGMTITQLAV 182 (323)
Q Consensus 109 ~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-~g~t~Lh~A~ 182 (323)
|+|+..|+.+++++|++... ..++..+..|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD---VNAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCCHHHHHH
Confidence 99999999999999999432 23677888999999999999999999999999999 899997 9999999999
Q ss_pred hhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 183 AVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 183 ~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
..|+. +++++|+++| ++++.+|..|.||+++|+. .++.+++++|
T Consensus 160 ~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~----~~~~~~~~~L 203 (236)
T 1ikn_D 160 DLQNP-----------------DLVSLLLKCG-ADVNRVTYQGYSPYQLTWG----RPSTRIQQQL 203 (236)
T ss_dssp HTTCH-----------------HHHHHHHTTT-CCSCCCCTTCCCGGGGCTT----SSCHHHHHHH
T ss_pred HcCCH-----------------HHHHHHHHcC-CCCCcccCCCCCHHHHHHc----cCchHHHHHH
Confidence 99999 9999999998 9999999999999999999 9999999998
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=4.7e-38 Score=272.91 Aligned_cols=209 Identities=20% Similarity=0.165 Sum_probs=170.7
Q ss_pred CCcHHHHHHHhCCHHHHHHHhcc----Cccccccc-cCCCCCCCHHHHHHHc---CCHHHHHHHHHhCCCc------ccc
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQ----DQLIIGRV-GVNCLSEFPLHAAALL---GHVDFEGEIRRQKPEL------AGE 66 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~----~~~~~~~~-~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~------~~~ 66 (323)
|+||||.|++.|+.++|+.|++. +.++++.. ..|..|.||||+|+.. |+.+++++|++++++. ++.
T Consensus 13 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~ 92 (273)
T 2pnn_A 13 DRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNA 92 (273)
T ss_dssp CHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTC
T ss_pred cchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhc
Confidence 67999999999999999999874 33332211 2366799999999987 9999999999997642 122
Q ss_pred ----cCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCC--------------CC-cHHHHHHHhCCHHHHHHHHHh-
Q 048253 67 ----LDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDL--------------DG-SPLHLAAMKGRIDVLEELFRT- 126 (323)
Q Consensus 67 ----~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g-t~L~~A~~~g~~~~v~~Ll~~- 126 (323)
+|..|+||||+|++.|+.+++++|+++|+++ +.++. .| ||||+|+..|+.+++++|++.
T Consensus 93 ~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 171 (273)
T 2pnn_A 93 SYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV-QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171 (273)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 5678999999999999999999999999998 66665 68 999999999999999999996
Q ss_pred -CCCcccccccccccHHHHHHhhCc---------hhHHHHHHhCCCCCCCCc-------ccccCCCcHHHHHHhhcchhh
Q 048253 127 -RPLAASATMIWGETILHLCVKHNQ---------LDALKFLLDNMDDPQFLN-------AEDDYGMTITQLAVAVKLCFQ 189 (323)
Q Consensus 127 -~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~g~~~~~~~-------~~d~~g~t~Lh~A~~~~~~~~ 189 (323)
.+++++.+|..|+||||+|+..|+ .+++++|+++|++ ++ .+|..|+||||+|+..|+.
T Consensus 172 ~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~n~~~~~~~~~d~~g~TpL~~A~~~g~~-- 246 (273)
T 2pnn_A 172 WQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAK---LHPTLKLEEITNRKGLTPLALAASSGKI-- 246 (273)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCH--
T ss_pred cCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhh---cccccccccccCCCCCCHHHHHHHhChH--
Confidence 689999999999999999999998 7999999999987 65 5899999999999999999
Q ss_pred hHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhh
Q 048253 190 NLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALD 230 (323)
Q Consensus 190 ~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~ 230 (323)
+++++|+++|..|+......+.+|-+
T Consensus 247 ---------------~iv~~Ll~~ga~dp~~~~~~~~~~~~ 272 (273)
T 2pnn_A 247 ---------------GVLAYILQREIHEPECRHAAAHHHHH 272 (273)
T ss_dssp ---------------HHHHHHHHHHTC--------------
T ss_pred ---------------HHHHHHHHCCCCCchhhhhhhhhccC
Confidence 99999999993388888887777654
No 44
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=266.39 Aligned_cols=177 Identities=22% Similarity=0.215 Sum_probs=147.4
Q ss_pred CCcHHHHHHHhCCHH-HHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHH
Q 048253 1 MKSMLYEAALKGCEP-TLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~-~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~ 79 (323)
|.||||.|+..+..+ ++++|++.|.+++.. |.+|.||||+|+..|+.+++++|++.++++ +.++..|.||+|+|+
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~---d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~-~~~~~~g~t~l~~a~ 127 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLGVNVT---SQDGSSPLHVAALHGRADLIPLLLKHGANA-GARNADQAVPLHLAC 127 (269)
T ss_dssp -----------------------CCCCTTCC---CTTSCCHHHHHHHTTCTTHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCCCCCc---CCCCCCHHHHHHHcCcHHHHHHHHhcCCCc-CccCCCCCCcccccc
Confidence 468999999988764 889999999887444 778999999999999999999999999998 889999999999999
Q ss_pred hcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHH
Q 048253 80 QKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLL 158 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 158 (323)
..++.+++++|++.|+++ +.+|..| ||||+|+..|+.+++++|++ .+++++..+..|+||||+|+..|+.+++++|+
T Consensus 128 ~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~~A~~~g~~~~v~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll 205 (269)
T 4b93_B 128 QQGHFQVVKCLLDSNAKP-NKKDLSGNTPLIYACSGGHHELVALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLL 205 (269)
T ss_dssp HHTCHHHHHHHHHTTCCS-CCCCTTCCCHHHHHHHTTCGGGHHHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred ccChHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHH
Confidence 999999999999999999 8899999 99999999999999999999 89999999999999999999999999999999
Q ss_pred hCCCCCCCCcccccCCCcHHHHHHhhcc
Q 048253 159 DNMDDPQFLNAEDDYGMTITQLAVAVKL 186 (323)
Q Consensus 159 ~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 186 (323)
++|++ ++.+|.+|+||||+|++.++
T Consensus 206 ~~Gad---~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 206 LHGAS---VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HTTCC---SCCCCTTSCCSGGGSCTTCH
T ss_pred HCCCC---CCCcCCCCCCHHHHHHhCCc
Confidence 99999 99999999999999987664
No 45
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=4.1e-36 Score=241.97 Aligned_cols=158 Identities=26% Similarity=0.278 Sum_probs=115.8
Q ss_pred CHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCH
Q 048253 39 FPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRI 117 (323)
Q Consensus 39 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~ 117 (323)
++|+.||+.|+.++|++|+++|+++ +.+|.+|+||||+|+..++.+++++|++.|+++ +.++..| ||||+|+..|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g~~ 83 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHK 83 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcCCH
Confidence 3577777777777777777777776 777777777777777777777777777777777 6677777 777777777777
Q ss_pred HHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHH
Q 048253 118 DVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEE 197 (323)
Q Consensus 118 ~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~ 197 (323)
+++++|++ .+++++.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+.
T Consensus 84 ~~v~~Ll~-~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~g~~---------- 149 (169)
T 4gpm_A 84 EVVKLLIS-KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNTSDSDGRTPLDLAREHGNE---------- 149 (169)
T ss_dssp HHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH----------
T ss_pred HHHHHHHH-CcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCH----------
Confidence 77777777 6777777777777777777777777777777777777 777777777777777777777
Q ss_pred HhhcchHHHHHHHhhcccccccc
Q 048253 198 YCHSKWGYVIRFLTTRTMIEVNA 220 (323)
Q Consensus 198 ~~~~~~~~~v~~Ll~~g~~~~~~ 220 (323)
+++++|+++| ++++.
T Consensus 150 -------~iv~~Ll~~G-A~ie~ 164 (169)
T 4gpm_A 150 -------EVVKLLEKQG-GWLEH 164 (169)
T ss_dssp -------HHHHHHHTC-------
T ss_pred -------HHHHHHHHCC-CCcCC
Confidence 7777777777 66653
No 46
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=1e-36 Score=261.92 Aligned_cols=194 Identities=21% Similarity=0.152 Sum_probs=171.0
Q ss_pred CCCCHHHHHHHcCCHH----HHHHHHHhCCCcccc----cCCCCCcHHHHHHhc---CCHHHHHHHHhcCCccccc----
Q 048253 36 LSEFPLHAAALLGHVD----FEGEIRRQKPELAGE----LDSNQFSALHIASQK---VHVDKIKALLQVNPAWCFA---- 100 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~~----~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~---- 100 (323)
.|+||||.|+..|+.+ ++++|++.+.++ +. +|..|+||||+|+.. |+.+++++|++.|+++...
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i-~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 79 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYL-TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLV 79 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGG
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhc
Confidence 3889999999999997 667788899988 66 899999999999999 9999999999998876321
Q ss_pred ------cCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccc-------------cccHHHHHHhhCchhHHHHHHh-
Q 048253 101 ------GDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIW-------------GETILHLCVKHNQLDALKFLLD- 159 (323)
Q Consensus 101 ------~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-------------g~t~Lh~A~~~g~~~~v~~Ll~- 159 (323)
++..| ||||+|+..|+.+++++|++ .+++++..+.. |+||||+|+..|+.+++++|++
T Consensus 80 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 158 (256)
T 2etb_A 80 NAQCTDEFYQGHSALHIAIEKRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158 (256)
T ss_dssp GCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred ccccccccccCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 24678 99999999999999999999 78999998876 9999999999999999999999
Q ss_pred --CCCCCCCCcccccCCCcHHHHHHh--hcchhhhHHHHHHHHhhcchHHHHHHHhhcccccc-------cccccCCCch
Q 048253 160 --NMDDPQFLNAEDDYGMTITQLAVA--VKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEV-------NALNANGFMA 228 (323)
Q Consensus 160 --~g~~~~~~~~~d~~g~t~Lh~A~~--~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~-------~~~d~~g~tp 228 (323)
+|++ ++.+|.+|+||||+|+. .++. +..+++ .+++++|+++| +++ +.+|..|+||
T Consensus 159 ~~~ga~---~n~~d~~g~TpLh~A~~~~~~~~--~~~~~~--------~~iv~~Ll~~g-a~~~~~~~~~~~~d~~g~tp 224 (256)
T 2etb_A 159 PHQPAS---LEATDSLGNTVLHALVMIADNSP--ENSALV--------IHMYDGLLQMG-ARLCPTVQLEEISNHQGLTP 224 (256)
T ss_dssp SSCCCC---TTCCCTTSCCHHHHHHHHCCSCH--HHHHHH--------HHHHHHHHHHH-HHHSTTCCGGGCCCTTSCCH
T ss_pred cccCCC---cCccCCCCCCHHHHHHHcccCCc--hhhHHH--------HHHHHHHHHcC-CCcccccccccccCCCCCCH
Confidence 8988 99999999999999998 5666 111110 02999999998 899 9999999999
Q ss_pred hhhhhhccCCCchhhhHHHHh
Q 048253 229 LDTLAQSKRDKKDWEIEDWKM 249 (323)
Q Consensus 229 l~~A~~~~~~~~~~~i~~~L~ 249 (323)
||+|++ .++.+++++|-
T Consensus 225 L~~A~~----~g~~~~v~~Ll 241 (256)
T 2etb_A 225 LKLAAK----EGKIEIFRHIL 241 (256)
T ss_dssp HHHHHH----TTCHHHHHHHH
T ss_pred HHHHHH----hCCHHHHHHHH
Confidence 999999 99999999993
No 47
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.3e-35 Score=239.04 Aligned_cols=155 Identities=26% Similarity=0.303 Sum_probs=146.3
Q ss_pred cHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcC
Q 048253 3 SMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKV 82 (323)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g 82 (323)
++|+.||+.|+.++|+.|++.|++++. +|..|.||||+|+..++.+++++|+++++++ +.+|.+|+||||+|++.|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~---~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGADVNA---SDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcC
Confidence 579999999999999999999998754 4778999999999999999999999999998 999999999999999999
Q ss_pred CHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCC
Q 048253 83 HVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNM 161 (323)
Q Consensus 83 ~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g 161 (323)
+.+++++|+++|+++ +.+|..| ||||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 82 ~~~~v~~Ll~~gadv-n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 82 HKEVVKLLISKGADV-NAKDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp CHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHHHCcCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 999999999999999 8899999 99999999999999999999 89999999999999999999999999999999999
Q ss_pred CC
Q 048253 162 DD 163 (323)
Q Consensus 162 ~~ 163 (323)
++
T Consensus 160 A~ 161 (169)
T 4gpm_A 160 GW 161 (169)
T ss_dssp --
T ss_pred CC
Confidence 98
No 48
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-36 Score=270.26 Aligned_cols=198 Identities=16% Similarity=0.070 Sum_probs=167.1
Q ss_pred HHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCC
Q 048253 4 MLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVH 83 (323)
Q Consensus 4 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~ 83 (323)
.+|.|+..+..++++.|++.+.+++.. .|..|.||||+|+..|+.++|++|+++|+++ +.+|..|+||||+|+..|+
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~g~dvn~~--~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~ 176 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNTQLNLNIP--VDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVN 176 (327)
T ss_dssp ----CHHHHHHHHHHHCTTSCCCSCSC--CSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSH
T ss_pred hhHHHHHhhHHHHHHHHHhcCCCcccc--cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhcc
Confidence 357788888899999999999887551 3777999999999999999999999999998 8999999999999999998
Q ss_pred ---HHHHHHHHhcC-CccccccCCCC-cHHHHHHH----hCCHHHHHHHHHhC-------------------CCcccccc
Q 048253 84 ---VDKIKALLQVN-PAWCFAGDLDG-SPLHLAAM----KGRIDVLEELFRTR-------------------PLAASATM 135 (323)
Q Consensus 84 ---~~~v~~Ll~~~-~~~~~~~~~~g-t~L~~A~~----~g~~~~v~~Ll~~~-------------------~~~~~~~~ 135 (323)
.++++.|++.+ +++ +.++..| ||||+|+. .|+.+++++|++.. +.+++..+
T Consensus 177 ~~~~~~~~~ll~~~~~~~-~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~ 255 (327)
T 1sw6_A 177 NYDSGTFEALLDYLYPCL-ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKN 255 (327)
T ss_dssp HHHTTCHHHHHHHHGGGG-GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC------------
T ss_pred cccHHHHHHHHHhhhccc-cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCccccc
Confidence 78888888887 555 8899999 99999999 89999999999842 78899999
Q ss_pred cccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccc
Q 048253 136 IWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTM 215 (323)
Q Consensus 136 ~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~ 215 (323)
..|+||||.|+. +++|+++ + +|.+|.+|+||||+|+..|+. ++|++|+++|
T Consensus 256 ~~g~t~L~~a~~------~~~Ll~~--~---~n~~d~~G~TpLh~A~~~g~~-----------------~~v~~Ll~~G- 306 (327)
T 1sw6_A 256 GERKDSILENLD------LKWIIAN--M---LNAQDSNGDTCLNIAARLGNI-----------------SIVDALLDYG- 306 (327)
T ss_dssp ----CHHHHHCS------HHHHHHH--T---TTCCCTTSCCHHHHHHHHCCH-----------------HHHHHHHHTT-
T ss_pred ccCCChhHHHHH------HHHHHHh--C---CCCCCCCCCCHHHHHHHcCCH-----------------HHHHHHHHcC-
Confidence 999999999996 8999997 3 889999999999999999999 9999999998
Q ss_pred ccccccccCCCchhhhhhh
Q 048253 216 IEVNALNANGFMALDTLAQ 234 (323)
Q Consensus 216 ~~~~~~d~~g~tpl~~A~~ 234 (323)
++++.+|.+|+||||+|++
T Consensus 307 ad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 307 ADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CCTTCCCTTSCCGGGGTCC
T ss_pred CCCcccCCCCCCHHHHHHh
Confidence 9999999999999999987
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-35 Score=259.77 Aligned_cols=217 Identities=20% Similarity=0.151 Sum_probs=190.4
Q ss_pred HHHHhCCHHHHHHHhccCccccccc------cCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 7 EAALKGCEPTLLELLQQDQLIIGRV------GVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 7 ~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
.++..++.+.++.++.......... ..+..|.||||.||..|+.+++++|+++++++ +..|..|.||||+|+.
T Consensus 4 ~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 82 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADI-NYANVDGLTALHQACI 82 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCT-TCBCTTCCBHHHHHHH
T ss_pred hHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 5678888888888888765532211 12345789999999999999999999999997 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|.||||+|+..++.+++++++.
T Consensus 83 ~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~ 160 (299)
T 1s70_B 83 DDNVDMVKFLVENGANI-NQPDNEGWIPLHAAASCGYLDIAEYLIS-QGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN 160 (299)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHh
Confidence 99999999999999999 8889999 99999999999999999999 789999999999999999999999999988775
Q ss_pred C-CCCC-----------------------CCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccc
Q 048253 160 N-MDDP-----------------------QFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTM 215 (323)
Q Consensus 160 ~-g~~~-----------------------~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~ 215 (323)
. +.+. ......+..|.||||+|+..|+. +++++|+++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~-----------------~~v~~Ll~~g- 222 (299)
T 1s70_B 161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT-----------------EVLKLLIQAR- 222 (299)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH-----------------HHHHHHHTTT-
T ss_pred hcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH-----------------HHHHHHHHcC-
Confidence 3 2220 01233567899999999999999 9999999998
Q ss_pred ccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 216 IEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 216 ~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
++++.+|..|.||||+|+. .++.+++++|
T Consensus 223 ~d~~~~d~~g~tpL~~A~~----~~~~~~v~~L 251 (299)
T 1s70_B 223 YDVNIKDYDGWTPLHAAAH----WGKEEACRIL 251 (299)
T ss_dssp CCTTCCCTTCCCHHHHHHH----TTCHHHHHHH
T ss_pred CCCCCcCCCCCcHHHHHHh----cCCHHHHHHH
Confidence 8999999999999999999 9999999998
No 50
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=2.6e-36 Score=259.89 Aligned_cols=196 Identities=18% Similarity=0.168 Sum_probs=170.8
Q ss_pred CCcHHHHHHHhCCHHHHHHHhc----cCccccccc-cCCCCCCCHHHHHH---HcCCHHHHHHHHHhCCCc---------
Q 048253 1 MKSMLYEAALKGCEPTLLELLQ----QDQLIIGRV-GVNCLSEFPLHAAA---LLGHVDFEGEIRRQKPEL--------- 63 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~-~~~~~g~t~Lh~A~---~~g~~~~v~~Ll~~~~~~--------- 63 (323)
|+|+||.|++.|+.+.|+.|++ .+.+++... ..|..|.||||+|+ ..|+.+++++|++.+++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 5 NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred hHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 5799999999999996555555 887765443 23467999999999 679999999999987532
Q ss_pred -ccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccC--------------CCC-cHHHHHHHhCCHHHHHHHHHh-
Q 048253 64 -AGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGD--------------LDG-SPLHLAAMKGRIDVLEELFRT- 126 (323)
Q Consensus 64 -~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g-t~L~~A~~~g~~~~v~~Ll~~- 126 (323)
.+..|..|+||||+|+..|+.+++++|+++|+++ +.++ ..| ||||+|+..|+.+++++|++.
T Consensus 85 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV-HAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred cccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCc-CccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 2445668999999999999999999999999999 6666 578 999999999999999999995
Q ss_pred -CCCcccccccccccHHHHHHhhCc---------hhHHHHHHhCCCCCCCC-------cccccCCCcHHHHHHhhcchhh
Q 048253 127 -RPLAASATMIWGETILHLCVKHNQ---------LDALKFLLDNMDDPQFL-------NAEDDYGMTITQLAVAVKLCFQ 189 (323)
Q Consensus 127 -~~~~~~~~~~~g~t~Lh~A~~~g~---------~~~v~~Ll~~g~~~~~~-------~~~d~~g~t~Lh~A~~~~~~~~ 189 (323)
.+++++.+|..|+||||+|+..++ .+++++|+++|++ + +.+|..|+||||+|+..|+.
T Consensus 164 ~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~~d~~g~tpL~~A~~~g~~-- 238 (260)
T 3jxi_A 164 HKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK---LFPDTNLEALLNNDGLSPLMMAAKTGKI-- 238 (260)
T ss_dssp SCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH---HCTTCCGGGCCCTTSCCHHHHHHHTTCH--
T ss_pred ccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc---cccccchhhcccCCCCCHHHHHHHcCCH--
Confidence 689999999999999999998887 7999999999987 5 67999999999999999999
Q ss_pred hHHHHHHHHhhcchHHHHHHHhhcccccc
Q 048253 190 NLVELVEEYCHSKWGYVIRFLTTRTMIEV 218 (323)
Q Consensus 190 ~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~ 218 (323)
+++++|+++| .+.
T Consensus 239 ---------------~~v~~Ll~~g-~~~ 251 (260)
T 3jxi_A 239 ---------------GIFQHIIRRE-IAD 251 (260)
T ss_dssp ---------------HHHHHHHHHH-HHH
T ss_pred ---------------HHHHHHHHhC-CCc
Confidence 9999999998 444
No 51
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.2e-35 Score=247.40 Aligned_cols=192 Identities=20% Similarity=0.207 Sum_probs=176.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.||||.|+..|+.+++++|++.+++.+.. .+..|.||||+|+..|+.+++++|++.++++ +.++..|.||||+|+.
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A~~ 118 (240)
T 3eu9_A 42 NVTLLHWAAINNRIDLVKYYISKGAIVDQL--GGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCIHLAAQ 118 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCC--BTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCcchhh--cCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHH
Confidence 679999999999999999999999876544 2445999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCC-HHHHHHHHHhCCCccccccc-ccccHHHHHHhhCchhHHHHH
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGR-IDVLEELFRTRPLAASATMI-WGETILHLCVKHNQLDALKFL 157 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~-~~~v~~Ll~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~L 157 (323)
.|+.+++++|+++|+++ ..++..| ||||+|+..++ .+++++|++ .+.+++..+. .|.||||+|+..|+.+++++|
T Consensus 119 ~~~~~~~~~Ll~~~~~~-~~~~~~g~t~l~~a~~~~~~~~~~~~L~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L 196 (240)
T 3eu9_A 119 FGHTSIVAYLIAKGQDV-DMMDQNGMTPLMWAAYRTHSVDPTRLLLT-FNVSVNLGDKYHKNTALHWAVLAGNTTVISLL 196 (240)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHCCSSTTHHHHHH-TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred cCHHHHHHHHHhcCCCc-cccCCCCCcHHHHHHHhCChHHHHHHHHh-cCCCcchhhccCCCcHHHHHHHcCCHHHHHHH
Confidence 99999999999999998 8889999 99999997776 889999999 8888988887 899999999999999999999
Q ss_pred HhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccc
Q 048253 158 LDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEV 218 (323)
Q Consensus 158 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~ 218 (323)
+++|++ ++.+|..|.||||+|+..++. +++++|++.+ .+.
T Consensus 197 l~~g~~---~~~~~~~g~t~l~~A~~~~~~-----------------~~v~~L~~~~-~~~ 236 (240)
T 3eu9_A 197 LEAGAN---VDAQNIKGESALDLAKQRKNV-----------------WMINHLQEAR-QAK 236 (240)
T ss_dssp HHHTCC---TTCBCTTSCBHHHHHHHTTCH-----------------HHHHHHHHHC----
T ss_pred HHcCCC---CCCcCCCCCCHHHHHHHcCcH-----------------HHHHHHHHhh-hcc
Confidence 999999 899999999999999999999 9999999987 443
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.2e-35 Score=257.71 Aligned_cols=199 Identities=20% Similarity=0.172 Sum_probs=169.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHh----CCCccc---ccCCCCCcHHHHHHhc---CCHHHHHHHHhcCCccc----
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQ----KPELAG---ELDSNQFSALHIASQK---VHVDKIKALLQVNPAWC---- 98 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~----~~~~~~---~~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~---- 98 (323)
.|..|.||||+|+..|+.++|+.|++. +.++.+ ..|..|+||||+|+.. |+.+++++|++.|++..
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~ 88 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQ 88 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHH
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhH
Confidence 477799999999999999999998874 444311 4588999999999986 99999999999987531
Q ss_pred --cc----cCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccccccc--------------ccccHHHHHHhhCchhHHHHH
Q 048253 99 --FA----GDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMI--------------WGETILHLCVKHNQLDALKFL 157 (323)
Q Consensus 99 --~~----~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--------------~g~t~Lh~A~~~g~~~~v~~L 157 (323)
+. ++..| ||||+|+..|+.+++++|++ .+++++..+. .|+||||+|+..|+.+++++|
T Consensus 89 ~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 89 FVNASYTDSYYKGQTALHIAIERRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp HHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred HhhcccccccCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 21 45688 99999999999999999999 7899999887 799999999999999999999
Q ss_pred Hh---CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccccc-------ccccCCCc
Q 048253 158 LD---NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVN-------ALNANGFM 227 (323)
Q Consensus 158 l~---~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~-------~~d~~g~t 227 (323)
++ +|++ ++.+|.+|+||||+|+..++......+++ .+++++|+++| ++++ .+|..|.|
T Consensus 168 l~~~~~gad---~~~~d~~g~tpLh~A~~~~~~~~~~~~~~--------~~~v~~Ll~~g-a~~n~~~~~~~~~d~~g~T 235 (273)
T 2pnn_A 168 LQNSWQPAD---ISARDSVGNTVLHALVEVADNTVDNTKFV--------TSMYNEILILG-AKLHPTLKLEEITNRKGLT 235 (273)
T ss_dssp HHCSSCCCC---TTCCCTTSCCHHHHHHHHCCSCHHHHHHH--------HHHHHHHHHHH-HHHCTTCCGGGCCCTTSCC
T ss_pred HhcccCCCC---ceeeCCCCCcHHHHHHHccCcchhHHHHH--------HHHHHHHHHhh-hhcccccccccccCCCCCC
Confidence 99 8888 99999999999999999887321222221 18999999998 8996 58999999
Q ss_pred hhhhhhhccCCCchhhhHHHH
Q 048253 228 ALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 228 pl~~A~~~~~~~~~~~i~~~L 248 (323)
|||+|++ .++.+++++|
T Consensus 236 pL~~A~~----~g~~~iv~~L 252 (273)
T 2pnn_A 236 PLALAAS----SGKIGVLAYI 252 (273)
T ss_dssp HHHHHHH----TTCHHHHHHH
T ss_pred HHHHHHH----hChHHHHHHH
Confidence 9999999 9999999998
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=4.6e-35 Score=252.10 Aligned_cols=198 Identities=21% Similarity=0.191 Sum_probs=169.2
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHH----HHhCCCcccccC----CCCCcHHHHHH---hcCCHHHHHHHHhcCCccc----
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEI----RRQKPELAGELD----SNQFSALHIAS---QKVHVDKIKALLQVNPAWC---- 98 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~L----l~~~~~~~~~~~----~~g~tpL~~A~---~~g~~~~v~~Ll~~~~~~~---- 98 (323)
+..|+|+||.|+..|+.+.++.| ++.+.++ +..+ ..|+||||+|+ +.|+.+++++|++.|++..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRL-TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMRE 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCT-TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCc-chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHh
Confidence 45699999999999999955544 4588887 5444 77999999999 7899999999999886421
Q ss_pred ------cccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccc--------------cccccHHHHHHhhCchhHHHHH
Q 048253 99 ------FAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATM--------------IWGETILHLCVKHNQLDALKFL 157 (323)
Q Consensus 99 ------~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~--------------~~g~t~Lh~A~~~g~~~~v~~L 157 (323)
...+..| ||||+|+..|+.+++++|++ .+++++..+ ..|+||||+|+..|+.+++++|
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 159 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 3344578 99999999999999999999 789999988 5899999999999999999999
Q ss_pred Hh---CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccc-------cccccCCCc
Q 048253 158 LD---NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEV-------NALNANGFM 227 (323)
Q Consensus 158 l~---~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~-------~~~d~~g~t 227 (323)
++ +|++ ++.+|..|+||||+|+..++......+.+. +++++|+++| +++ +.+|..|.|
T Consensus 160 l~~~~~ga~---~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~--------~~v~~Ll~~g-a~~~~~~~~~~~~d~~g~t 227 (260)
T 3jxi_A 160 TENGHKQAD---LRRQDSRGNTVLHALVAIADNTRENTKFVT--------KMYDLLLIKC-AKLFPDTNLEALLNNDGLS 227 (260)
T ss_dssp HHCSSCCCC---TTCCCTTSCCHHHHHHHHCCSSHHHHHHHH--------HHHHHHHHHH-HHHCTTCCGGGCCCTTSCC
T ss_pred HhccccCCC---CcccCCCCCcHHHHHHHhccCchhHHHHHH--------HHHHHHHHhC-cccccccchhhcccCCCCC
Confidence 99 8888 999999999999999988773222222211 8999999998 898 789999999
Q ss_pred hhhhhhhccCCCchhhhHHHHh
Q 048253 228 ALDTLAQSKRDKKDWEIEDWKM 249 (323)
Q Consensus 228 pl~~A~~~~~~~~~~~i~~~L~ 249 (323)
|||+|++ .++.+++++|-
T Consensus 228 pL~~A~~----~g~~~~v~~Ll 245 (260)
T 3jxi_A 228 PLMMAAK----TGKIGIFQHII 245 (260)
T ss_dssp HHHHHHH----TTCHHHHHHHH
T ss_pred HHHHHHH----cCCHHHHHHHH
Confidence 9999999 99999999983
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=253.08 Aligned_cols=191 Identities=15% Similarity=0.124 Sum_probs=176.1
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHH--
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIAS-- 79 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~-- 79 (323)
++++|.|+..|+.+.++.+++...+. ..+..|..|.||||+|+..|+.+++++|++.++..++..|..|+||||+|+
T Consensus 77 ~~~l~~a~~~~~~~~~~~l~~~~~~~-~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 77 RSDAHPELVRRHLVTFRAMSARLLDY-VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp STTCCHHHHHHHHHHHHHHCHHHHHH-HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhh-cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 57889999999999999999887662 234457889999999999999999999999998445999999999999999
Q ss_pred ---hcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHH
Q 048253 80 ---QKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALK 155 (323)
Q Consensus 80 ---~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~ 155 (323)
..++.+++++|++.|... ...+..| ||||+|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.++++
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~tpLh~A~~~g~~~~v~~Ll~-~gad~n~~d~~G~TpLh~A~~~g~~~iv~ 233 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNIN-AKASQAGQTALMLAVSHGRVDVVKALLA-CEADVNVQDDDGSTALMCACEHGHKEIAG 233 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTT-CCCTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Confidence 678899999999999887 7788889 99999999999999999999 89999999999999999999999999999
Q ss_pred HHHh-CCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccc
Q 048253 156 FLLD-NMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTM 215 (323)
Q Consensus 156 ~Ll~-~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~ 215 (323)
+|++ .|++ ++.+|..|+||||+|+..|+. +++++|+++.+
T Consensus 234 ~Ll~~~gad---~~~~d~~g~TpL~~A~~~g~~-----------------~iv~~Ll~~~~ 274 (276)
T 4hbd_A 234 LLLAVPSCD---ISLTDRDGSTALMVALDAGQS-----------------EIASMLYSRMN 274 (276)
T ss_dssp HHHTSTTCC---TTCCCTTSCCHHHHHHHHTCH-----------------HHHHHHHHHCC
T ss_pred HHHhcCCCC---CcCcCCCCCCHHHHHHHcCCH-----------------HHHHHHHhccC
Confidence 9999 8988 999999999999999999999 99999999863
No 55
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.7e-34 Score=231.91 Aligned_cols=169 Identities=24% Similarity=0.244 Sum_probs=131.9
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhC
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKG 115 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g 115 (323)
+.||||.|+..|+.+++++|++.++..++.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+..|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~ 80 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTGG 80 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHCC
Confidence 4578888888888888888888877755777888888888888888888888888888877 6677777 8888888888
Q ss_pred CHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHH
Q 048253 116 RIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELV 195 (323)
Q Consensus 116 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l 195 (323)
+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.
T Consensus 81 ~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~-------- 148 (172)
T 3v30_A 81 YTDIVGLLLE-RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD---LTTEADSGYTPMDLAVALGYR-------- 148 (172)
T ss_dssp CHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH--------
T ss_pred CHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHhCcH--------
Confidence 8888888887 6777888888888888888888888888888888877 788888888888888888888
Q ss_pred HHHhhcchHHHHHHHhhcccccccccccCCCch
Q 048253 196 EEYCHSKWGYVIRFLTTRTMIEVNALNANGFMA 228 (323)
Q Consensus 196 ~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tp 228 (323)
+++++|++++ +++...+..|.||
T Consensus 149 ---------~~~~~L~~~~-~~~~~~~~~~~~p 171 (172)
T 3v30_A 149 ---------KVQQVIENHI-LKLFQSNLVPADP 171 (172)
T ss_dssp ---------HHHHHHHHHH-HHHSCC-------
T ss_pred ---------HHHHHHHHHH-HHHhcccCCCCCC
Confidence 8888888887 7888888877776
No 56
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.1e-36 Score=254.93 Aligned_cols=201 Identities=15% Similarity=0.040 Sum_probs=174.0
Q ss_pred HHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCc
Q 048253 17 LLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPA 96 (323)
Q Consensus 17 v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 96 (323)
|+.|++++++.+.....+..+.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|++.|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~ 79 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAGAN 79 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 46788888887666666777889999999999999999999999988 89999999999999999999999999999999
Q ss_pred cccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccc-cccccHHHHH--HhhCchhHHHHHHhCCCCCCCCccccc
Q 048253 97 WCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATM-IWGETILHLC--VKHNQLDALKFLLDNMDDPQFLNAEDD 172 (323)
Q Consensus 97 ~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~t~Lh~A--~~~g~~~~v~~Ll~~g~~~~~~~~~d~ 172 (323)
+ +.++..| ||||+|+..|+.+++++|++ .+++++..+ ..|+||||+| +..|+.+++++|+++|++ ++.+|.
T Consensus 80 ~-n~~d~~g~tpLh~A~~~g~~~~v~~Ll~-~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~---~~~~~~ 154 (229)
T 2vge_A 80 V-NSPDSHGWTPLHCAASCNDTVICMALVQ-HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS---MGLMNS 154 (229)
T ss_dssp T-TCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH---TTTSGG
T ss_pred C-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC---cccccC
Confidence 9 8889999 99999999999999999999 788999886 6999999999 999999999999999998 899999
Q ss_pred CCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccc--ccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 173 YGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIE--VNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 173 ~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~--~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
.|.||++.++..... ++|++.| ++ ++.+|.+|+||||+|++ .++.++++.+
T Consensus 155 ~~~~~l~~~~~~~~~--------------------~~ll~~g-a~~~~~~~d~~G~TpL~~A~~----~g~~~~v~~~ 207 (229)
T 2vge_A 155 GAVYALWDYSAEFGD--------------------ELSFREG-ESVTVLRRDGPEETDWWWAAL----HGQEGYVPRN 207 (229)
T ss_dssp GEEEESSCBCCSSTT--------------------BCCBCTT-CEEEEEESSCTTCSSEEEEEE----TTEEEEEEGG
T ss_pred CchHHHHHHhhcccc--------------------ccCcccc-ccccccccCCCcccHHHHHHH----cCCcceeehh
Confidence 999999976554333 6778877 67 77889999999999999 8888888764
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=2.1e-33 Score=230.83 Aligned_cols=159 Identities=22% Similarity=0.210 Sum_probs=152.8
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLA 111 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A 111 (323)
+|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||||+|
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTPLMWS 108 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 4777999999999999999999999999987 889999999999999999999999999999998 8889999 999999
Q ss_pred HHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhH
Q 048253 112 AMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNL 191 (323)
Q Consensus 112 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~ 191 (323)
+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.
T Consensus 109 ~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~---- 180 (192)
T 2rfm_A 109 IIFGYSEMSYFLLE-HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---ISARDLTGLTAEASARIFGRQ---- 180 (192)
T ss_dssp HHHTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCH----
T ss_pred HHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhCcH----
Confidence 99999999999999 7899999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHhhcchHHHHHHHhhcc
Q 048253 192 VELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 192 ~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+++++|++++
T Consensus 181 -------------~~v~~Ll~~~ 190 (192)
T 2rfm_A 181 -------------EVIKIFTEVR 190 (192)
T ss_dssp -------------HHHHHHHHHH
T ss_pred -------------HHHHHHHhcc
Confidence 9999999876
No 58
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.3e-33 Score=226.48 Aligned_cols=168 Identities=18% Similarity=0.123 Sum_probs=150.9
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhc
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQK 81 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 81 (323)
.||||.|+..|+.+++++|++.++... ...|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (172)
T 3v30_A 3 SLSIHQLAAQGELDQLKEHLRKGDNLV--NKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLASTG 79 (172)
T ss_dssp -CCHHHHHHTTCHHHHHHHHTTCSGGG--GCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHT
T ss_pred hhhHHHHHHcCCHHHHHHHHHcCcccc--cCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHHC
Confidence 589999999999999999999987732 334777999999999999999999999999998 89999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhC
Q 048253 82 VHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDN 160 (323)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 160 (323)
|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++
T Consensus 80 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 157 (172)
T 3v30_A 80 GYTDIVGLLLERDVDI-NIYDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157 (172)
T ss_dssp TCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHH
Confidence 9999999999999998 8889999 99999999999999999999 7899999999999999999999999999999999
Q ss_pred CCCCCCCcccccCCCcH
Q 048253 161 MDDPQFLNAEDDYGMTI 177 (323)
Q Consensus 161 g~~~~~~~~~d~~g~t~ 177 (323)
+++ +..++..|.||
T Consensus 158 ~~~---~~~~~~~~~~p 171 (172)
T 3v30_A 158 ILK---LFQSNLVPADP 171 (172)
T ss_dssp HHH---HSCC-------
T ss_pred HHH---HhcccCCCCCC
Confidence 987 77777777776
No 59
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=247.51 Aligned_cols=185 Identities=23% Similarity=0.235 Sum_probs=172.7
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCC-cccccCCCCCcHHHHHHhcCCHHHHHHHHhcCC-ccccccCCCC-cHHHHHH-
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPE-LAGELDSNQFSALHIASQKVHVDKIKALLQVNP-AWCFAGDLDG-SPLHLAA- 112 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~g-t~L~~A~- 112 (323)
..+++|.|+..|+.+.++.+++.+.+ .++.+|.+|+||||+|+..|+.+++++|++.|+ ++ +..+..| ||||+|+
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~~g~tpL~~a~~ 154 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKV-DKQNRAGYSPIMLTAL 154 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCT-TCCCTTSCCHHHHGGG
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcC-CCCCCCCCCHHHHHHH
Confidence 57889999999999999999987655 238899999999999999999999999999998 65 8899999 9999999
Q ss_pred ----HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchh
Q 048253 113 ----MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCF 188 (323)
Q Consensus 113 ----~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~ 188 (323)
..++.+++++|++ .+...+..+..|+||||+|+..|+.+++++|+++|++ +|.+|.+|+||||+|+..|+.
T Consensus 155 ~~~~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad---~n~~d~~G~TpLh~A~~~g~~- 229 (276)
T 4hbd_A 155 ATLKTQDDIETVLQLFR-LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEAD---VNVQDDDGSTALMCACEHGHK- 229 (276)
T ss_dssp CCCCSHHHHHHHHHHHH-HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH-
T ss_pred HHhhhhhhHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHCCCH-
Confidence 6788999999999 6788888899999999999999999999999999999 999999999999999999999
Q ss_pred hhHHHHHHHHhhcchHHHHHHHhh-cccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 189 QNLVELVEEYCHSKWGYVIRFLTT-RTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 189 ~~~~~~l~~~~~~~~~~~v~~Ll~-~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+++++|++ .| ++++.+|..|+||||+|++ .++.+++++|
T Consensus 230 ----------------~iv~~Ll~~~g-ad~~~~d~~g~TpL~~A~~----~g~~~iv~~L 269 (276)
T 4hbd_A 230 ----------------EIAGLLLAVPS-CDISLTDRDGSTALMVALD----AGQSEIASML 269 (276)
T ss_dssp ----------------HHHHHHHTSTT-CCTTCCCTTSCCHHHHHHH----HTCHHHHHHH
T ss_pred ----------------HHHHHHHhcCC-CCCcCcCCCCCCHHHHHHH----cCCHHHHHHH
Confidence 99999999 56 9999999999999999999 9999999998
No 60
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1e-32 Score=221.57 Aligned_cols=156 Identities=23% Similarity=0.240 Sum_probs=131.0
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHh
Q 048253 36 LSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMK 114 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~ 114 (323)
.|.||||.|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +..+..| ||||+|+..
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 79 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACSK 79 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHc
Confidence 3778888888888888888888888776 778888888888888888888888888888887 6677778 888888888
Q ss_pred CCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHH
Q 048253 115 GRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVEL 194 (323)
Q Consensus 115 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 194 (323)
|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.
T Consensus 80 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~------- 148 (167)
T 3v31_A 80 GYTDIVKMLLD-CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD---PTIETDSGYNSMDLAVALGYR------- 148 (167)
T ss_dssp TCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHHTCH-------
T ss_pred CCHHHHHHHHH-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcH-------
Confidence 88888888888 6777888888888888888888888888888888887 788888888888888888888
Q ss_pred HHHHhhcchHHHHHHHhhcc
Q 048253 195 VEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 195 l~~~~~~~~~~~v~~Ll~~g 214 (323)
+++++|++++
T Consensus 149 ----------~~~~~L~~~~ 158 (167)
T 3v31_A 149 ----------SVQQVIESHL 158 (167)
T ss_dssp ----------HHHHHHHHHH
T ss_pred ----------HHHHHHHHHH
Confidence 8888888776
No 61
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.1e-32 Score=220.03 Aligned_cols=156 Identities=22% Similarity=0.266 Sum_probs=142.5
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhc
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQK 81 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 81 (323)
.||||.|+..|+.+++++|++.+.+++. .|..|.||||+|+. |+.+++++|+++++++ +.+|..|+||||+|++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNVNA---QNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCTTC---CCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCccc---cCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 5899999999999999999999887643 47779999999999 9999999999999988 88999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhC
Q 048253 82 VHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDN 160 (323)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 160 (323)
|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++.....++..|..|+||||+|+..|+.+++++|+++
T Consensus 81 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 81 GFLDTLQTLLEFQADV-NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 9999999999999998 8889999 9999999999999999999955555789999999999999999999999999999
Q ss_pred CCC
Q 048253 161 MDD 163 (323)
Q Consensus 161 g~~ 163 (323)
|++
T Consensus 160 GAd 162 (162)
T 1ihb_A 160 GAG 162 (162)
T ss_dssp C--
T ss_pred CCC
Confidence 875
No 62
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=2.6e-32 Score=219.77 Aligned_cols=158 Identities=25% Similarity=0.330 Sum_probs=143.2
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAA 112 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~ 112 (323)
...+.++||.|+..|+.+++++|++++.++ +.+|..|.||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 88 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAA 88 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 345788999999999999999999999887 888999999999999999999999999999988 7788889 9999999
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHH
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLV 192 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ 192 (323)
..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.
T Consensus 89 ~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~----- 159 (169)
T 2y1l_E 89 LFGHLEIVEVLLK-NGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKFGKTAFDISIDNGNE----- 159 (169)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH-----
T ss_pred HcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhCCH-----
Confidence 9999999999999 7888999999999999999999999999999999988 889999999999999999999
Q ss_pred HHHHHHhhcchHHHHHHHhhcc
Q 048253 193 ELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 193 ~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+++++|++.|
T Consensus 160 ------------~~~~~L~~~G 169 (169)
T 2y1l_E 160 ------------DLAEILQKLN 169 (169)
T ss_dssp ------------HHHHHHHTC-
T ss_pred ------------HHHHHHHHcC
Confidence 9999998765
No 63
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=100.00 E-value=1.2e-32 Score=219.77 Aligned_cols=158 Identities=19% Similarity=0.170 Sum_probs=148.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHh
Q 048253 36 LSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMK 114 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~ 114 (323)
...||||.|+..|+.+++++|++++.++ +.+|..|+||||+|+. |+.+++++|++.|+++ +.++..| ||||+|+..
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 80 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDAARA 80 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 3679999999999999999999999988 8899999999999999 9999999999999998 8889999 999999999
Q ss_pred CCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHH
Q 048253 115 GRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVEL 194 (323)
Q Consensus 115 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 194 (323)
|+.+++++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++. ++.+|..|.||||+|+..++.
T Consensus 81 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--~~~~~~~g~t~l~~A~~~~~~------- 150 (162)
T 1ihb_A 81 GFLDTLQTLLE-FQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN--VGHRNHKGDTACDLARLYGRN------- 150 (162)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC--TTCCCTTSCCHHHHHHHTTCH-------
T ss_pred CCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC--CCCcCCCCCcHHHHHHHcCCH-------
Confidence 99999999999 78999999999999999999999999999999999873 588999999999999999999
Q ss_pred HHHHhhcchHHHHHHHhhccccc
Q 048253 195 VEEYCHSKWGYVIRFLTTRTMIE 217 (323)
Q Consensus 195 l~~~~~~~~~~~v~~Ll~~g~~~ 217 (323)
+++++|+++| +|
T Consensus 151 ----------~~~~~Ll~~G-Ad 162 (162)
T 1ihb_A 151 ----------EVVSLMQANG-AG 162 (162)
T ss_dssp ----------HHHHHHHHTC---
T ss_pred ----------HHHHHHHHhC-CC
Confidence 9999999988 54
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=100.00 E-value=2.3e-32 Score=222.17 Aligned_cols=167 Identities=17% Similarity=0.098 Sum_probs=142.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHh
Q 048253 36 LSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMK 114 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~ 114 (323)
++.++||.|+..|+.+++++|++.+...++.+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+..
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 82 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAASH 82 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 47788999999999999999998866555888888999999999999999999999988888 7778888 999999999
Q ss_pred CCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHH
Q 048253 115 GRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVEL 194 (323)
Q Consensus 115 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~ 194 (323)
|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.
T Consensus 83 ~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~------- 151 (179)
T 3f6q_A 83 GHRDIVQKLLQ-YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYGEMPVDKAKAPLRE------- 151 (179)
T ss_dssp TCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SSBCCTTSCCGGGGSCHHHHH-------
T ss_pred CCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---cchhccCCCCcHHHHHHHHHH-------
Confidence 99999999988 7888888888899999999999999999999998888 888888999999999888888
Q ss_pred HHHHhhcchHHHHHHHhhcccccccccccCC
Q 048253 195 VEEYCHSKWGYVIRFLTTRTMIEVNALNANG 225 (323)
Q Consensus 195 l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g 225 (323)
+++++|++.| ++++..+.++
T Consensus 152 ----------~~~~~L~~~g-~~~~~~~~~~ 171 (179)
T 3f6q_A 152 ----------LLRERAEKMG-QNLNRIPYKD 171 (179)
T ss_dssp ----------HHHHHHHHTT-CCCSCBCCCC
T ss_pred ----------HHHHHHHHhh-cCcccCCccc
Confidence 8899999888 7887766544
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=3.4e-32 Score=218.52 Aligned_cols=157 Identities=18% Similarity=0.138 Sum_probs=148.2
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+.+++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|.||||+|+.
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQENVINH---TDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLACS 78 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHSSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcCCCcCC---CCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 68999999999999999999999877543 4778999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|++
T Consensus 79 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (167)
T 3v31_A 79 KGYTDIVKMLLDCGVDV-NEYDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALGYRSVQQVIES 156 (167)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHCCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 99999999999999999 8889999 99999999999999999999 899999999999999999999999999999999
Q ss_pred CCCC
Q 048253 160 NMDD 163 (323)
Q Consensus 160 ~g~~ 163 (323)
++++
T Consensus 157 ~~~~ 160 (167)
T 3v31_A 157 HLLK 160 (167)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8644
No 66
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=100.00 E-value=5.9e-32 Score=217.74 Aligned_cols=154 Identities=24% Similarity=0.371 Sum_probs=145.4
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhc
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQK 81 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 81 (323)
.|+|+.|++.|+.++|++|++.+.+++. .|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 90 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADVNA---EDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLRLAALF 90 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHc
Confidence 5799999999999999999999987644 3777999999999999999999999999998 88999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhC
Q 048253 82 VHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDN 160 (323)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 160 (323)
|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|.||||+|+..|+.+++++|++.
T Consensus 91 ~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 91 GHLEIVEVLLKNGADV-NANDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 9999999999999998 8889999 99999999999999999999 7899999999999999999999999999999987
Q ss_pred C
Q 048253 161 M 161 (323)
Q Consensus 161 g 161 (323)
|
T Consensus 169 G 169 (169)
T 2y1l_E 169 N 169 (169)
T ss_dssp -
T ss_pred C
Confidence 5
No 67
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=3.1e-32 Score=223.88 Aligned_cols=158 Identities=18% Similarity=0.143 Sum_probs=151.9
Q ss_pred ccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHH
Q 048253 64 AGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETIL 142 (323)
Q Consensus 64 ~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 142 (323)
.+.+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+|||
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLS-KGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHH
Confidence 3678999999999999999999999999999998 7888899 99999999999999999999 6888999999999999
Q ss_pred HHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccc
Q 048253 143 HLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALN 222 (323)
Q Consensus 143 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d 222 (323)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++. +++++|+++| ++++.+|
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~~ 164 (192)
T 2rfm_A 106 MWSIIFGYSEMSYFLLEHGAN---VNDRNLEGETPLIVASKYGRS-----------------EIVKKLLELG-ADISARD 164 (192)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCH-----------------HHHHHHHHTT-CCTTCBC
T ss_pred HHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCH-----------------HHHHHHHHCC-CCCCCcC
Confidence 999999999999999999998 999999999999999999999 9999999998 8999999
Q ss_pred cCCCchhhhhhhccCCCchhhhHHHH
Q 048253 223 ANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 223 ~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
..|.||+++|+. .++.+++++|
T Consensus 165 ~~g~t~l~~A~~----~~~~~~v~~L 186 (192)
T 2rfm_A 165 LTGLTAEASARI----FGRQEVIKIF 186 (192)
T ss_dssp TTSCBHHHHHHH----TTCHHHHHHH
T ss_pred CCCCCHHHHHHH----hCcHHHHHHH
Confidence 999999999999 9999999998
No 68
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=6.4e-33 Score=246.98 Aligned_cols=169 Identities=12% Similarity=-0.019 Sum_probs=143.9
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCC---HHHHHHHHHhCCCcccccCCCCCcHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGH---VDFEGEIRRQKPELAGELDSNQFSALHI 77 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~v~~Ll~~~~~~~~~~~~~g~tpL~~ 77 (323)
|+||||+|+..|+.++|++|++++++++. .|..|.||||+|+..|+ .++++.|++.+...++.+|..|+||||+
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~---~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~ 207 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSNRLY---GDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHH 207 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTB---CCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCCC---cCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHH
Confidence 78999999999999999999999998754 47789999999999999 7888888888744448999999999999
Q ss_pred HHh----cCCHHHHHHHHhc--------------------CCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCccc
Q 048253 78 ASQ----KVHVDKIKALLQV--------------------NPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAAS 132 (323)
Q Consensus 78 A~~----~g~~~~v~~Ll~~--------------------~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~ 132 (323)
|++ .|+.+++++|++. |+++ +.++..| ||||.|+. +++|++. +++
T Consensus 208 A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~-~~~~~~g~t~L~~a~~------~~~Ll~~---~~n 277 (327)
T 1sw6_A 208 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP-NDKNGERKDSILENLD------LKWIIAN---MLN 277 (327)
T ss_dssp HHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-----------------CHHHHHCS------HHHHHHH---TTT
T ss_pred HHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCc-ccccccCCChhHHHHH------HHHHHHh---CCC
Confidence 999 8999999999987 7777 7788999 99999985 8999995 588
Q ss_pred ccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhc
Q 048253 133 ATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVK 185 (323)
Q Consensus 133 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~ 185 (323)
.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|++.|
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHhcC
Confidence 9999999999999999999999999999999 9999999999999998764
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.98 E-value=2.2e-31 Score=210.80 Aligned_cols=143 Identities=22% Similarity=0.250 Sum_probs=87.9
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCC
Q 048253 38 EFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGR 116 (323)
Q Consensus 38 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~ 116 (323)
.||||.|+..|+.+++++|++++++. + .+..|.||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 79 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASEGH 79 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHHTC
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCh
Confidence 45566666666666666666665544 2 3555666666666666666666666666655 5555555 66666666666
Q ss_pred HHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcch
Q 048253 117 IDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLC 187 (323)
Q Consensus 117 ~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 187 (323)
.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.
T Consensus 80 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 80 ANIVEVLLK-HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp HHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCH
Confidence 666666666 5555666666666666666666666666666666665 566666666666666666666
No 70
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=5.5e-32 Score=216.86 Aligned_cols=158 Identities=23% Similarity=0.255 Sum_probs=113.8
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAA 112 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~ 112 (323)
|..|.||||.|+..|+.+++++|++.+....+..+..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNAC 83 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHH
Confidence 3446777777777777777777777555444666667777777777777777777777777776 6666777 7777777
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHH
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLV 192 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ 192 (323)
..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+. ++.
T Consensus 84 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~a~~-~~~----- 153 (165)
T 3twr_A 84 SYGHYEVAELLVK-HGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD---PTKKNRDGNTPLDLVKD-GDT----- 153 (165)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCTGGGSCT-TCH-----
T ss_pred HcCcHHHHHHHHh-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCChhHhHhc-CCh-----
Confidence 7777777777777 6677777777777777777777777777777777777 67777777777777655 666
Q ss_pred HHHHHHhhcchHHHHHHHhhcc
Q 048253 193 ELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 193 ~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+++++|++.|
T Consensus 154 ------------~i~~~L~~~g 163 (165)
T 3twr_A 154 ------------DIQDLLRGDA 163 (165)
T ss_dssp ------------HHHHHHHTC-
T ss_pred ------------HHHHHHhhcc
Confidence 7777777665
No 71
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=2.9e-31 Score=215.67 Aligned_cols=166 Identities=18% Similarity=0.114 Sum_probs=151.6
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
+.++||.|+..|+.++|++|++.++.. ....|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 81 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDNTEND--LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLAAS 81 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHCTTSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 358999999999999999999986542 2335778999999999999999999999999998 8899999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+++++..|..|+||||+|+..++.+++++|++
T Consensus 82 ~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~ 159 (179)
T 3f6q_A 82 HGHRDIVQKLLQYKADI-NAVNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAPLRELLRERAEK 159 (179)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 8889999 99999999999999999999 889999999999999999999999999999999
Q ss_pred CCCCCCCCcccccCC
Q 048253 160 NMDDPQFLNAEDDYG 174 (323)
Q Consensus 160 ~g~~~~~~~~~d~~g 174 (323)
+|++ ++..+..+
T Consensus 160 ~g~~---~~~~~~~~ 171 (179)
T 3f6q_A 160 MGQN---LNRIPYKD 171 (179)
T ss_dssp TTCC---CSCBCCCC
T ss_pred hhcC---cccCCccc
Confidence 9998 66655443
No 72
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=3e-31 Score=209.96 Aligned_cols=149 Identities=21% Similarity=0.257 Sum_probs=141.6
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhc
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQK 81 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 81 (323)
.|+|+.|++.|+.+++++|++.+++.. .+..|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~----~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT----TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC----CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC----cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 589999999999999999999998652 3677999999999999999999999999998 88999999999999999
Q ss_pred CCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHH
Q 048253 82 VHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFL 157 (323)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~L 157 (323)
|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|
T Consensus 78 ~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 78 GHANIVEVLLKHGADV-NAKDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred ChHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9999999999999999 8889999 99999999999999999999 7999999999999999999999999999987
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2e-31 Score=213.55 Aligned_cols=156 Identities=22% Similarity=0.221 Sum_probs=143.0
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+|+||.|++.|+.+++++|++.++. .....+..|.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+.
T Consensus 8 ~~~~l~~A~~~g~~~~v~~ll~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 84 (165)
T 3twr_A 8 ADRQLLEAAKAGDVETVKKLCTVQSV--NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPLHNACS 84 (165)
T ss_dssp HHHHHHHHHHHTCHHHHHHHCCTTTT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred hhHHHHHHHHhCCHHHHHHHHHcCCC--CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHHHHHHH
Confidence 46899999999999999999997653 23345677999999999999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+. ++.+++++|++
T Consensus 85 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~ 161 (165)
T 3twr_A 85 YGHYEVAELLVKHGAVV-NVADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRG 161 (165)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred cCcHHHHHHHHhCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHhc-CChHHHHHHhh
Confidence 99999999999999999 8889999 99999999999999999999 789999999999999999877 89999999999
Q ss_pred CCC
Q 048253 160 NMD 162 (323)
Q Consensus 160 ~g~ 162 (323)
+|+
T Consensus 162 ~gA 164 (165)
T 3twr_A 162 DAA 164 (165)
T ss_dssp C--
T ss_pred ccc
Confidence 875
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.7e-33 Score=239.63 Aligned_cols=207 Identities=20% Similarity=0.169 Sum_probs=151.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.||||.|++.|+.+.++.|++++.+++. +..|.||||.|+..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 5 g~t~L~~a~~~~~~~~~~~ll~~g~~~~~----~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~ 79 (239)
T 1ycs_B 5 GQVSLPPGKRTNLRKTGSERIAHGMRVKF----NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVC 79 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHH
T ss_pred ccccCchhhhhhhHHHHHHHhccCCCccc----CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHH
Confidence 78999999999999999999999988632 456899999999999999999999999987 9999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccc-cHHHHH--HhhCchhHHHH
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGE-TILHLC--VKHNQLDALKF 156 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A--~~~g~~~~v~~ 156 (323)
.|+.+++++|+++|+++ +.+|..| ||||+|+..|+.+++++|++ .+++++..+..|. ||||+| +..|+.+++++
T Consensus 80 ~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~ 157 (239)
T 1ycs_B 80 AGHTEIVKFLVQFGVNV-NAADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157 (239)
T ss_dssp HTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHH
T ss_pred cCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHHHHHHhhhccHHHHHH
Confidence 99999999999999999 8899999 99999999999999999999 7899999998877 999999 88999999999
Q ss_pred HHhCCCCCCCCccc------ccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccc------ccccccC
Q 048253 157 LLDNMDDPQFLNAE------DDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIE------VNALNAN 224 (323)
Q Consensus 157 Ll~~g~~~~~~~~~------d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~------~~~~d~~ 224 (323)
|+++|++....+.. |..+.++++++...|.. ++.|.+.+ .+ ....++.
T Consensus 158 Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~-------------------i~vl~~~~-~~~~~Ww~~~~~~~~ 217 (239)
T 1ycs_B 158 LYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDC-------------------MTIIHRED-EDEIEWWWARLNDKE 217 (239)
T ss_dssp HHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCE-------------------EEECCCCT-TSCSSEEEEEETTEE
T ss_pred HHHhhhcccccccceEEEEeccCCCCCCcccccCCCE-------------------EEEEEecC-CCCCCEEEEEECCcE
Confidence 99998873332222 77789999999887754 34444433 22 2356788
Q ss_pred CCchhhhhhh
Q 048253 225 GFMALDTLAQ 234 (323)
Q Consensus 225 g~tpl~~A~~ 234 (323)
|.+|..+...
T Consensus 218 G~~P~~yv~~ 227 (239)
T 1ycs_B 218 GYVPRNLLGL 227 (239)
T ss_dssp EEEEGGGEEC
T ss_pred EEeehHHeeE
Confidence 9999988765
No 75
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=5.2e-31 Score=209.09 Aligned_cols=143 Identities=24% Similarity=0.214 Sum_probs=69.0
Q ss_pred CCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCC
Q 048253 38 EFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGR 116 (323)
Q Consensus 38 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~ 116 (323)
.||||.|+..|+.+++++|++......+.+|..|+||||+ +..|+.+++++|++.|+++ +.++..| ||||+|+..|+
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~ 80 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAARTGF 80 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTC
T ss_pred chHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCc
Confidence 3444555555555555554444211124444445555554 4444555555555544444 4444444 55555555555
Q ss_pred HHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcch
Q 048253 117 IDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLC 187 (323)
Q Consensus 117 ~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 187 (323)
.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++ ++ ++.+|.+|.||||+|+..|+.
T Consensus 81 ~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 81 LDTLKVLVE-HGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp HHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCCHHHHHHHSCCH
T ss_pred HHHHHHHHH-cCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCCHHHHHHHcCcH
Confidence 555555554 4444444444555555555555555555555544 33 444455555555555555554
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=8.3e-31 Score=207.90 Aligned_cols=153 Identities=22% Similarity=0.258 Sum_probs=141.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|.||||.|+..|+.+++++|++. .. .+....|..|.||||+ +..|+.+++++|+++++++ +.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~-~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-EL-VHPDALNRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TC-CCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hC-cCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 46899999999999999999998 31 1223457789999999 9999999999999999998 8999999999999999
Q ss_pred cCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHh
Q 048253 81 KVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ . .+++..|..|+||||+|+..|+.+++++|++
T Consensus 78 ~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADV-NVPDGTGALPIHLAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp TTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred cCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 99999999999999998 8889999 99999999999999999999 5 8999999999999999999999999999997
Q ss_pred C
Q 048253 160 N 160 (323)
Q Consensus 160 ~ 160 (323)
+
T Consensus 155 ~ 155 (156)
T 1bd8_A 155 H 155 (156)
T ss_dssp T
T ss_pred h
Confidence 5
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.97 E-value=2.7e-33 Score=252.84 Aligned_cols=226 Identities=15% Similarity=0.081 Sum_probs=175.1
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc--ccccCCCCCcHHHHHH
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPEL--AGELDSNQFSALHIAS 79 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~tpL~~A~ 79 (323)
+||||.|++.|+.++|++|++.++........+..|.||||+|+..|+.++|++|++++++. .+..+.+ +||||+|+
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa 171 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAA 171 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHH
Confidence 58999999999999999999998732222223455889999999999999999999999752 1222333 99999999
Q ss_pred hcCCHHHHHHHHhcCCccccc--cCCCC-cHHHHHH-HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHH
Q 048253 80 QKVHVDKIKALLQVNPAWCFA--GDLDG-SPLHLAA-MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALK 155 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~--~~~~g-t~L~~A~-~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~ 155 (323)
+.|+.+++++|+++|+++ .. .+..| ||||+|+ ..|+.+++++|++ .+. .|.||||+|+.+|+.++++
T Consensus 172 ~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~-~ga-------~~~taL~~Aa~~g~~evv~ 242 (376)
T 2aja_A 172 ENGHLHVLNRLCELAPTE-ATAMIQAENYYAFRWAAVGRGHHNVINFLLD-CPV-------MLAYAEIHEFEYGEKYVNP 242 (376)
T ss_dssp HTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT-SHH-------HHHHHHHCTTTTTTTTHHH
T ss_pred HCCCHHHHHHHHHcCCcc-chhccCCCCCCHHHHHHHHCCCHHHHHHHHh-CCC-------ccchHHHHHHHCCCHHHHH
Confidence 999999999999999997 44 77788 9999999 9999999999999 442 4899999999999999999
Q ss_pred HHHhCCCCCCCCcccccCCCcHHHHHHhhcchh----------hhHHHHHHHHhhcchHHHHHHHhhccccc----cccc
Q 048253 156 FLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCF----------QNLVELVEEYCHSKWGYVIRFLTTRTMIE----VNAL 221 (323)
Q Consensus 156 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~----------~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~----~~~~ 221 (323)
+|+++|++ ++.+| ++++.|+..|+.. ..+.+.+...+.....+.+++|++.+.++ ....
T Consensus 243 lL~~~ga~---~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~ 315 (376)
T 2aja_A 243 FIARHVNR---LKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATI 315 (376)
T ss_dssp HHHHHHHH---HHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSS
T ss_pred HHHhcCcc---ccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCC
Confidence 99999876 55544 4677777777651 01334455555555668888888754211 1222
Q ss_pred ccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 222 NANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 222 d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
.+.+.||+++|++ .|+.+++++|
T Consensus 316 ~n~~~~~L~~A~~----~g~~e~v~lL 338 (376)
T 2aja_A 316 PGDANELLRLALR----LGNQGACALL 338 (376)
T ss_dssp TTCCCHHHHHHHH----HTCTTHHHHH
T ss_pred CCCccHHHHHHHH----cCcHHHHHHH
Confidence 3456789999999 9999999999
No 78
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=6.8e-34 Score=240.53 Aligned_cols=176 Identities=16% Similarity=0.004 Sum_probs=158.2
Q ss_pred CcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhc
Q 048253 2 KSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQK 81 (323)
Q Consensus 2 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~ 81 (323)
.||||.|+..|+.++|++|++.+++++. .|..|.||||+|+..|+.+++++|+++|+++ +.+|..|+||||+|+..
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~---~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpLh~A~~~ 97 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMNDPSQ---PNEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPLHCAASC 97 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSSCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHT
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCCCCCC---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHc
Confidence 5899999999999999999999987644 4778999999999999999999999999998 89999999999999999
Q ss_pred CCHHHHHHHHhcCCcccccc-CCCC-cHHHHH--HHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHH
Q 048253 82 VHVDKIKALLQVNPAWCFAG-DLDG-SPLHLA--AMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFL 157 (323)
Q Consensus 82 g~~~~v~~Ll~~~~~~~~~~-~~~g-t~L~~A--~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~L 157 (323)
|+.+++++|++.|+++ +.+ +..| ||||+| +..|+.+++++|++ .+++++..|..|.||++.++..... ++|
T Consensus 98 g~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~l~~~~~~~~~---~~l 172 (229)
T 2vge_A 98 NDTVICMALVQHGAAI-FATTLSDGATAFEKCDPYREGYADCATYLAD-VEQSMGLMNSGAVYALWDYSAEFGD---ELS 172 (229)
T ss_dssp TCHHHHHHHHTTTCCT-TCCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-HHHHTTTSGGGEEEESSCBCCSSTT---BCC
T ss_pred CCHHHHHHHHHcCCCc-ccccCCCCCCHHHHHHHHhcChHHHHHHHHH-cCCCcccccCCchHHHHHHhhcccc---ccC
Confidence 9999999999999999 555 4689 999999 99999999999999 7889999999999999976665443 577
Q ss_pred HhCCCCCCCCcccccCCCcHHHHHHhhcch
Q 048253 158 LDNMDDPQFLNAEDDYGMTITQLAVAVKLC 187 (323)
Q Consensus 158 l~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 187 (323)
++.|++. .++.+|.+|+||||+|+..|+.
T Consensus 173 l~~ga~~-~~~~~d~~G~TpL~~A~~~g~~ 201 (229)
T 2vge_A 173 FREGESV-TVLRRDGPEETDWWWAALHGQE 201 (229)
T ss_dssp BCTTCEE-EEEESSCTTCSSEEEEEETTEE
T ss_pred ccccccc-cccccCCCcccHHHHHHHcCCc
Confidence 8888652 2677899999999999999999
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=8.9e-32 Score=229.00 Aligned_cols=174 Identities=14% Similarity=0.069 Sum_probs=131.5
Q ss_pred CCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHh
Q 048253 36 LSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMK 114 (323)
Q Consensus 36 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~ 114 (323)
.|.||||.|+..|+.++++.|+++|.++ +. +..|.||||.|+..|+.+++++|++.|+++ +.++..| ||||+|+..
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~-~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMRV-KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCCc-cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHc
Confidence 4999999999999999999999999987 54 478999999999999999999999999998 8889999 999999999
Q ss_pred CCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCC-cHHHHH--HhhcchhhhH
Q 048253 115 GRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGM-TITQLA--VAVKLCFQNL 191 (323)
Q Consensus 115 g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~-t~Lh~A--~~~~~~~~~~ 191 (323)
|+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|. ||||+| +..|+.
T Consensus 81 g~~~~v~~Ll~-~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~~g~~---- 152 (239)
T 1ycs_B 81 GHTEIVKFLVQ-FGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA---VFAMTYSDMQTAADKCEEMEEGYT---- 152 (239)
T ss_dssp TCHHHHHHHHH-HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCSSSCCCHHHHCCSSSTTCC----
T ss_pred CCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---cceecCCCCcchHHHHHHhhhccH----
Confidence 99999999999 6899999999999999999999999999999999999 899988877 999999 788889
Q ss_pred HHHHHHHhhcchHHHHHHHhhccccccccc---------ccCCCchhhhhhh
Q 048253 192 VELVEEYCHSKWGYVIRFLTTRTMIEVNAL---------NANGFMALDTLAQ 234 (323)
Q Consensus 192 ~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~---------d~~g~tpl~~A~~ 234 (323)
+++++|++++ ++++.. +..+.+|.+++.+
T Consensus 153 -------------~~~~~Ll~~~-a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 153 -------------QCSQFLYGVQ-EKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp -------------CHHHHHHHHH-HHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred -------------HHHHHHHHhh-hcccccccceEEEEeccCCCCCCccccc
Confidence 9999999988 788766 5668888888877
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.96 E-value=6.4e-29 Score=203.07 Aligned_cols=162 Identities=11% Similarity=0.036 Sum_probs=132.5
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCH----HHHHHHHhcCCccccccCCCC-cHHHHH
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHV----DKIKALLQVNPAWCFAGDLDG-SPLHLA 111 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g-t~L~~A 111 (323)
+.++|+.|++.|+.+.++.+++.+.+. ..+..|+||||+|+..|+. +++++|+++|+++ +.++..| ||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHHH
Confidence 457788888888888888888776432 2236688888888888764 4788888888888 7778888 888888
Q ss_pred HHhCC------HHHHHHHHHhCCCcccccccccc-cHHHHHHhhC-----chhHHHHHHh-CCCCCCCCcccccCCCcHH
Q 048253 112 AMKGR------IDVLEELFRTRPLAASATMIWGE-TILHLCVKHN-----QLDALKFLLD-NMDDPQFLNAEDDYGMTIT 178 (323)
Q Consensus 112 ~~~g~------~~~v~~Ll~~~~~~~~~~~~~g~-t~Lh~A~~~g-----~~~~v~~Ll~-~g~~~~~~~~~d~~g~t~L 178 (323)
+..++ .+++++|++ .+++++.+|..|+ ||||+|+..+ +.+++++|++ +|++ ++.+|..|.|||
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~-~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---~~~~d~~G~TpL 158 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLE-KGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---LLIKDKWGLTAL 158 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHH-TTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC---TTCCCTTSCCHH
T ss_pred HHcCCcchhhHHHHHHHHHH-CCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC---CcccCCCCCCHH
Confidence 88876 578999999 8999999999999 9999999944 4569999999 9999 999999999999
Q ss_pred HHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccccccccc
Q 048253 179 QLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNA 223 (323)
Q Consensus 179 h~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~ 223 (323)
|+|+..++. ++|++|.+.. .+.+++++
T Consensus 159 ~~A~~~~~~-----------------~~v~~L~~~~-~~~~~~~~ 185 (186)
T 3t8k_A 159 EFVKRCQKP-----------------IALKMMEDYI-KKYNLKEN 185 (186)
T ss_dssp HHHHTTTCH-----------------HHHHHHHHHH-HHHTCCC-
T ss_pred HHHHHcCCH-----------------HHHHHHHHHH-HHHhcccC
Confidence 999999999 9999998876 46666553
No 81
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=8.1e-29 Score=196.69 Aligned_cols=138 Identities=17% Similarity=0.136 Sum_probs=67.1
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-c-HHHHHH
Q 048253 35 CLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-S-PLHLAA 112 (323)
Q Consensus 35 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t-~L~~A~ 112 (323)
..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+ .|+.+++++|+++|+++ +.++..| | |||+|+
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 86 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 34555666666666666666655555554 555555555555553 55555555555555555 4455555 4 555555
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHH
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQ 179 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh 179 (323)
..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||.+
T Consensus 87 ~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 87 REGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAE 149 (156)
T ss_dssp HHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccc
Confidence 5555555555555 3444555555555555555555555555555555544 4445555555444
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=8.7e-29 Score=196.50 Aligned_cols=138 Identities=17% Similarity=0.109 Sum_probs=114.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCc-HHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFS-ALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t-pL~~A~ 79 (323)
|.||||.|+..|+.++|++|++++.+++.. |..|.||||+|+ .|+.+++++|+++++++ +.+|..|+| |||+|+
T Consensus 12 ~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~---~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttpL~~A~ 86 (156)
T 1bi7_B 12 SADWLATAAARGRVEEVRALLEAGANPNAP---NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRPVHDAA 86 (156)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCCTTCC---CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCHHHHHH
T ss_pred chHHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHH
Confidence 689999999999999999999999876443 778999999996 99999999999999998 899999999 999999
Q ss_pred hcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHH
Q 048253 80 QKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLC 145 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 145 (323)
+.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+++++..+..|.||.+.+
T Consensus 87 ~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 87 REGFLDTLVVLHRAGARL-DVRDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHTCHHHHHHHHHHTCCS-SCCCTTCCCHHHHHHHHTCHHHHHHHSS-CC-----------------
T ss_pred HCCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCcccccC
Confidence 999999999999999999 8889999 99999999999999999999 8999999999999998743
No 83
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=3.9e-28 Score=188.19 Aligned_cols=128 Identities=20% Similarity=0.189 Sum_probs=120.7
Q ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCC-C-cHHH
Q 048253 32 GVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLD-G-SPLH 109 (323)
Q Consensus 32 ~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-g-t~L~ 109 (323)
..|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+. |+.+++++|+++|+++ +.++.. | ||||
T Consensus 7 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t~L~ 83 (136)
T 1d9s_A 7 MLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTRPVH 83 (136)
T ss_dssp CCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBCHHH
T ss_pred CCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCCHHH
Confidence 34777999999999999999999999999987 8899999999999999 9999999999999998 788888 8 9999
Q ss_pred HHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCC
Q 048253 110 LAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDD 163 (323)
Q Consensus 110 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 163 (323)
+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..++.+++++|+++|++
T Consensus 84 ~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 84 DAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999 8899999999999999999999999999999998875
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=4.3e-28 Score=187.95 Aligned_cols=132 Identities=21% Similarity=0.209 Sum_probs=124.8
Q ss_pred CCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccc-c
Q 048253 61 PELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIW-G 138 (323)
Q Consensus 61 ~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-g 138 (323)
+++ +.+|..|.||||+|++.|+.+++++|+++|+++ +.++..| ||||+|+. |+.+++++|++ .+.+++..|.. |
T Consensus 3 ~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~-~g~~~~~~~~~~g 78 (136)
T 1d9s_A 3 PGI-HMLGGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLL-HGAEPNCADPATL 78 (136)
T ss_dssp CCC-SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHH-HTCCSSCCBTTTT
T ss_pred CCc-cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHH-CCCCCCCcCCCCC
Confidence 344 888999999999999999999999999999998 8889999 99999999 99999999999 78899999999 9
Q ss_pred ccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccc
Q 048253 139 ETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIE 217 (323)
Q Consensus 139 ~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~ 217 (323)
+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++. +++++|+++| +|
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~Ll~~G-ad 136 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHRAGAR---LDVCDAWGRLPVDLAEEQGHR-----------------DIARYLHAAT-GD 136 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTCCC---CCCCSSSSSCHHHHHHHHTCH-----------------HHHHHHHHHH-CC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCH-----------------HHHHHHHHcC-CC
Confidence 9999999999999999999999999 999999999999999999999 9999999987 54
No 85
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=3.4e-30 Score=232.54 Aligned_cols=196 Identities=14% Similarity=0.145 Sum_probs=157.3
Q ss_pred HHHHHHH-hCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCc--ccccCCCCCcHHHHHHh
Q 048253 4 MLYEAAL-KGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPEL--AGELDSNQFSALHIASQ 80 (323)
Q Consensus 4 ~L~~A~~-~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~--~~~~~~~g~tpL~~A~~ 80 (323)
+++.|.. .++.+.++++++++.+ ++||||+|+..|+.++|++|+++++.. .+..+..|.||||+|++
T Consensus 68 ~~~~a~~~~~~~~~~~~l~~~g~~----------~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~ 137 (376)
T 2aja_A 68 CLYYAHYNRNAKQLWSDAHKKGIK----------SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAE 137 (376)
T ss_dssp HHHHHHTTTTCTTHHHHHHHHTCC----------HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHcCCC----------cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHH
Confidence 5556655 4777788888776533 569999999999999999999998732 12345678899999999
Q ss_pred cCCHHHHHHHHhcCCcccc-ccCCC-CcHHHHHHHhCCHHHHHHHHHhCCCcccc--cccccccHHHHHH-hhCchhHHH
Q 048253 81 KVHVDKIKALLQVNPAWCF-AGDLD-GSPLHLAAMKGRIDVLEELFRTRPLAASA--TMIWGETILHLCV-KHNQLDALK 155 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~~~~~-~~~~~-gt~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~g~t~Lh~A~-~~g~~~~v~ 155 (323)
.|+.+++++|+++|+++.. ..+.. .||||+|+..|+.+++++|++ .+++++. .|..|+||||+|+ .+|+.++++
T Consensus 138 ~G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~-~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~ 216 (376)
T 2aja_A 138 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE-LAPTEATAMIQAENYYAFRWAAVGRGHHNVIN 216 (376)
T ss_dssp TTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHH-SCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHH
T ss_pred cCCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHH-cCCccchhccCCCCCCHHHHHHHHCCCHHHHH
Confidence 9999999999999975311 01122 399999999999999999999 7888877 8899999999999 999999999
Q ss_pred HHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhc
Q 048253 156 FLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQS 235 (323)
Q Consensus 156 ~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~ 235 (323)
+|++.|+ .|.||||+|+..|+. +++++|+++| ++++..+ ++++.|+.
T Consensus 217 ~Ll~~ga----------~~~taL~~Aa~~g~~-----------------evv~lL~~~g-a~~~~~~----~~l~~A~~- 263 (376)
T 2aja_A 217 FLLDCPV----------MLAYAEIHEFEYGEK-----------------YVNPFIARHV-NRLKEMH----DAFKLSNP- 263 (376)
T ss_dssp HHTTSHH----------HHHHHHHCTTTTTTT-----------------THHHHHHHHH-HHHHHHH----TTTTTTSS-
T ss_pred HHHhCCC----------ccchHHHHHHHCCCH-----------------HHHHHHHhcC-ccccccc----HHHHHHHH-
Confidence 9999653 278999999999999 9999999998 7887665 37788887
Q ss_pred cCCCchhhhHH
Q 048253 236 KRDKKDWEIED 246 (323)
Q Consensus 236 ~~~~~~~~i~~ 246 (323)
.++.++++
T Consensus 264 ---~g~~~vv~ 271 (376)
T 2aja_A 264 ---DGVFDLVT 271 (376)
T ss_dssp ---SSCCCCSS
T ss_pred ---CCChhhhc
Confidence 67666553
No 86
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=7e-28 Score=196.88 Aligned_cols=156 Identities=8% Similarity=-0.012 Sum_probs=136.1
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCH----HHHHHHHHhCCCcccccccccccHHHHH
Q 048253 71 QFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRI----DVLEELFRTRPLAASATMIWGETILHLC 145 (323)
Q Consensus 71 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~----~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 145 (323)
+.++|+.|++.|+.+.++.++..+.+. ..+..| ||||+|+..|+. +++++|++ .+++++.+|..|+||||+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~--~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~-~Gadvn~~d~~g~TpLh~a 82 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYED--KESVLKSNILYDVLRNNNDEARYKISMFLIN-KGADIKSRTKEGTTLFFPL 82 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSC--HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHH-TTCCSSCCCTTCCCTHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCccc--ccccCCCCHHHHHHHcCCcchHHHHHHHHHH-CCCCCCCCCCCCCcHHHHH
Confidence 568999999999999999999887654 223678 999999999975 59999999 8999999999999999999
Q ss_pred HhhCc------hhHHHHHHhCCCCCCCCcccccCCC-cHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhh-ccccc
Q 048253 146 VKHNQ------LDALKFLLDNMDDPQFLNAEDDYGM-TITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTT-RTMIE 217 (323)
Q Consensus 146 ~~~g~------~~~v~~Ll~~g~~~~~~~~~d~~g~-t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~-~g~~~ 217 (323)
+..++ .+++++|+++|++ +|.+|..|+ ||||+|+..+.. .....+++++|++ +| ++
T Consensus 83 ~~~~~~~~~~~~~iv~~Ll~~Gad---in~~d~~g~ttpLh~A~~~~~~------------~~~~~~iv~~Ll~~~g-ad 146 (186)
T 3t8k_A 83 FQGGGNDITGTTELCKIFLEKGAD---ITALYKPYKIVVFKNIFNYFVD------------ENEMIPLYKLIFSQSG-LQ 146 (186)
T ss_dssp HHHCTTCHHHHHHHHHHHHHTTCC---SSSCBGGGTBCTTGGGGGCCSC------------HHHHHHHHHHHHTSTT-CC
T ss_pred HHcCCcchhhHHHHHHHHHHCCCC---CCccCCCcCchHHHHHHHcCCC------------hhhHHHHHHHHHHhcC-CC
Confidence 99987 5789999999999 999999999 999999984432 0011179999999 77 99
Q ss_pred ccccccCCCchhhhhhhccCCCchhhhHHHHh
Q 048253 218 VNALNANGFMALDTLAQSKRDKKDWEIEDWKM 249 (323)
Q Consensus 218 ~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L~ 249 (323)
++.+|..|+||||+|++ .++.+++++|.
T Consensus 147 ~~~~d~~G~TpL~~A~~----~~~~~~v~~L~ 174 (186)
T 3t8k_A 147 LLIKDKWGLTALEFVKR----CQKPIALKMME 174 (186)
T ss_dssp TTCCCTTSCCHHHHHHT----TTCHHHHHHHH
T ss_pred CcccCCCCCCHHHHHHH----cCCHHHHHHHH
Confidence 99999999999999999 99999999983
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=1.3e-26 Score=176.40 Aligned_cols=124 Identities=31% Similarity=0.449 Sum_probs=97.6
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhC
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKG 115 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g 115 (323)
|.||||+|+..|+.+++++|++++.++ +.++..|.||||+|+..++.+++++|++.|+++ +.++..| ||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~~~~ 79 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHHHcC
Confidence 778888888888888888888877776 677777888888888888888888888877777 6677777 8888888888
Q ss_pred CHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCC
Q 048253 116 RIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDD 163 (323)
Q Consensus 116 ~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~ 163 (323)
+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++
T Consensus 80 ~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 HLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred hHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 8888888887 6777777777888888888888888888888877764
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.5e-26 Score=179.25 Aligned_cols=125 Identities=22% Similarity=0.265 Sum_probs=110.9
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAA 112 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~ 112 (323)
...+.||||+|+..|+.+++++|++++.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 88 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPLHLAA 88 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHH
Confidence 345889999999999999999999998887 888899999999999999999999999999988 7788888 9999999
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCC
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNM 161 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g 161 (323)
..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|
T Consensus 89 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 89 FIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 9999999999998 78888888999999999999999999999998865
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.94 E-value=4.7e-26 Score=173.32 Aligned_cols=125 Identities=32% Similarity=0.437 Sum_probs=119.4
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhh
Q 048253 70 NQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKH 148 (323)
Q Consensus 70 ~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~ 148 (323)
+|+||||+|++.|+.+++++|+++|+++ +..+..| ||||+|+..++.+++++|++ .+.+++..|..|+||||+|+..
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~ 78 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARN 78 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHH-cCCCCcccCCCCCcHHHHHHHc
Confidence 5899999999999999999999999998 7788899 99999999999999999999 7889999999999999999999
Q ss_pred CchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccc
Q 048253 149 NQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIE 217 (323)
Q Consensus 149 g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~ 217 (323)
|+.+++++|+++|++ ++.+|..|.||||+|+..++. +++++|+++| +|
T Consensus 79 ~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~-----------------~~~~~Ll~~G-ad 126 (126)
T 1n0r_A 79 GHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHL-----------------EVVKLLLEAG-AY 126 (126)
T ss_dssp TCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHHT-CC
T ss_pred ChHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCcH-----------------HHHHHHHHcC-CC
Confidence 999999999999998 899999999999999999999 9999999988 54
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=2.9e-26 Score=177.62 Aligned_cols=126 Identities=25% Similarity=0.287 Sum_probs=118.3
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHH
Q 048253 67 LDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLC 145 (323)
Q Consensus 67 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 145 (323)
....+.||||+|++.|+.+++++|+++|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t~L~~A 87 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLK-NGADVNAVDAIGFTPLHLA 87 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHH
Confidence 4567889999999999999999999999998 8889999 99999999999999999999 7899999999999999999
Q ss_pred HhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 146 VKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 146 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+..|+.+++++|+++|++ ++.+|.+|+||||+|+..++. +++++|++.|
T Consensus 88 ~~~~~~~~v~~Ll~~g~~---~~~~~~~g~tpl~~A~~~~~~-----------------~~~~~Ll~~G 136 (136)
T 2jab_A 88 AFIGHLEIAEVLLKHGAD---VNAQDKFGKTAFDISIGNGNE-----------------DLAEILQKLN 136 (136)
T ss_dssp HHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHC-
T ss_pred HHcCCHHHHHHHHHcCCC---CcCcCCCCCCHHHHHHHCCCH-----------------HHHHHHHHcC
Confidence 999999999999999998 899999999999999999999 9999999865
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=7.7e-28 Score=205.30 Aligned_cols=139 Identities=20% Similarity=0.125 Sum_probs=126.0
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccC-CCC-cHHHHHH
Q 048253 35 CLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGD-LDG-SPLHLAA 112 (323)
Q Consensus 35 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g-t~L~~A~ 112 (323)
..|.||||+|+..|+.+++++|++ +.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++ ..| ||||+|+
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHH
Confidence 358999999999999999999999 8877 899999999999999999999999999999999 5566 788 9999999
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHH
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLV 192 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~ 192 (323)
..|+.+++++|++ .+++++..|..|+||||+|+..++ ...+.||||+|+..|+.
T Consensus 120 ~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~~~~~--------------------~~~~~~~l~~a~~~g~~----- 173 (244)
T 3ui2_A 120 GYVRPEVVEALVE-LGADIEVEDERGLTALELAREILK--------------------TTPKGNPMQFGRRIGLE----- 173 (244)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHHT--------------------TCCCSSHHHHHHHHHHH-----
T ss_pred HcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHHHh--------------------ccCCCCHHHHHHHcChH-----
Confidence 9999999999999 799999999999999999986321 24678999999999999
Q ss_pred HHHHHHhhcchHHHHHHHhhcc
Q 048253 193 ELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 193 ~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
+++++|++++
T Consensus 174 ------------~iv~~L~~~~ 183 (244)
T 3ui2_A 174 ------------KVINVLEGQV 183 (244)
T ss_dssp ------------HHHHHHHHHH
T ss_pred ------------HHHHHHHHhc
Confidence 9999998864
No 92
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=1e-25 Score=183.50 Aligned_cols=136 Identities=21% Similarity=0.186 Sum_probs=92.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccC-CCCCcHHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELD-SNQFSALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A~ 79 (323)
|+||||.|+..|+.+++++|++ +.+++. .|..|.||||+|+..|+.+++++|+++++++ +.++ ..|+||||+|+
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~---~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDVDA---VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHH
Confidence 3567777777777777777777 554422 3556777777777777777777777777766 5555 66777777777
Q ss_pred hcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHH
Q 048253 80 QKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLL 158 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 158 (323)
..|+.+++++|+++|+++ +.++..| ||||+|++.++. ..+.++|++|+..|+.+++++|.
T Consensus 119 ~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 119 GYVRPEVVEALVELGADI-EVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp HTTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHcCCCC-cCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHH
Confidence 777777777777777776 6667777 777777653211 24566777777777777777776
Q ss_pred hC
Q 048253 159 DN 160 (323)
Q Consensus 159 ~~ 160 (323)
++
T Consensus 180 ~~ 181 (183)
T 3deo_A 180 GQ 181 (183)
T ss_dssp TC
T ss_pred Hh
Confidence 54
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=6.6e-26 Score=175.74 Aligned_cols=116 Identities=26% Similarity=0.298 Sum_probs=60.2
Q ss_pred cCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHH
Q 048253 67 LDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLC 145 (323)
Q Consensus 67 ~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A 145 (323)
+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|
T Consensus 6 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A 83 (137)
T 3c5r_A 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ-HKALVNTTGYQNDSPLHDA 83 (137)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCGGGCCHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCcccCcCCCCCCHHHHH
Confidence 3444555555555555555555555554444 4444444 55555555555555555554 4444555555555555555
Q ss_pred HhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcch
Q 048253 146 VKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLC 187 (323)
Q Consensus 146 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~ 187 (323)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..+..
T Consensus 84 ~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~ 122 (137)
T 3c5r_A 84 AKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMK 122 (137)
T ss_dssp HHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHH
T ss_pred HHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHH
Confidence 555555555555555555 555555555555555555444
No 94
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.1e-25 Score=174.44 Aligned_cols=123 Identities=20% Similarity=0.194 Sum_probs=117.8
Q ss_pred ccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHH
Q 048253 100 AGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTIT 178 (323)
Q Consensus 100 ~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~L 178 (323)
.++..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+|||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL---VNTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCc---ccCcCCCCCCHH
Confidence 577889 99999999999999999999 7899999999999999999999999999999999998 999999999999
Q ss_pred HHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 179 QLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 179 h~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
|+|+..++. +++++|+++| ++++.+|..|.||+++|+. .+..+++++|
T Consensus 81 ~~A~~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~tpl~~A~~----~~~~~~l~~l 128 (137)
T 3c5r_A 81 HDAAKNGHV-----------------DIVKLLLSYG-ASRNAVNIFGLRPVDYTDD----ESMKSLLLLP 128 (137)
T ss_dssp HHHHHTTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCGGGGCCC----HHHHHHHSCC
T ss_pred HHHHHcCCH-----------------HHHHHHHHcC-CCCCCCCCCCCCHHHHHhh----ccHHHHHhhc
Confidence 999999999 9999999998 8999999999999999999 8888888888
No 95
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.2e-25 Score=191.68 Aligned_cols=138 Identities=20% Similarity=0.177 Sum_probs=124.3
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccC-CCCCcHHHHHH
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELD-SNQFSALHIAS 79 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g~tpL~~A~ 79 (323)
|+||||.|++.|+.++|++|++ +.+++. .|..|.||||+|+..|+.+++++|+++++++ +.++ ..|+||||+|+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~---~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~L~~A~ 119 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDVDA---VDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMAA 119 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCTTC---BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCCCC---cCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHHH
Confidence 5799999999999999999999 776543 4778999999999999999999999999998 7777 88999999999
Q ss_pred hcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHH
Q 048253 80 QKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLL 158 (323)
Q Consensus 80 ~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll 158 (323)
..|+.+++++|+++|+++ +.++..| ||||+|+..++ ...+.||||+|+..|+.+++++|+
T Consensus 120 ~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~ 180 (244)
T 3ui2_A 120 GYVRPEVVEALVELGADI-EVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLE 180 (244)
T ss_dssp HTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHH
Confidence 999999999999999999 8899999 99999986321 246899999999999999999999
Q ss_pred hCCC
Q 048253 159 DNMD 162 (323)
Q Consensus 159 ~~g~ 162 (323)
+++.
T Consensus 181 ~~~~ 184 (244)
T 3ui2_A 181 GQVF 184 (244)
T ss_dssp HHHE
T ss_pred Hhcc
Confidence 8653
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.93 E-value=2.1e-25 Score=181.66 Aligned_cols=139 Identities=20% Similarity=0.116 Sum_probs=125.8
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccC-CCC-cHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGD-LDG-SPLHLA 111 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~-~~g-t~L~~A 111 (323)
+..|.||||+|+..|+.+++++|++ +.++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++ ..| ||||+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tpL~~A 117 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTALHMA 117 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCHHHHH
Confidence 3458999999999999999999999 8777 899999999999999999999999999999999 5566 889 999999
Q ss_pred HHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhH
Q 048253 112 AMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNL 191 (323)
Q Consensus 112 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~ 191 (323)
+..|+.+++++|++ .+++++.+|.+|+||||+|+..++. ..+.++|++|+..|+.
T Consensus 118 ~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~--------------------~~~~~~l~~a~~~~~~---- 172 (183)
T 3deo_A 118 AGYVRPEVVEALVE-LGADIEVEDERGLTALELAREILKT--------------------TPKGNPMQFGRRIGLE---- 172 (183)
T ss_dssp HHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHHHHHT--------------------CCCCSHHHHHHHHHHH----
T ss_pred HhcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHHhccC--------------------cccccHHHHHHHcCHH----
Confidence 99999999999999 6899999999999999999975432 3457999999999999
Q ss_pred HHHHHHHhhcchHHHHHHHhhc
Q 048253 192 VELVEEYCHSKWGYVIRFLTTR 213 (323)
Q Consensus 192 ~~~l~~~~~~~~~~~v~~Ll~~ 213 (323)
+++++|.++
T Consensus 173 -------------~i~~~L~~~ 181 (183)
T 3deo_A 173 -------------KVINVLEGQ 181 (183)
T ss_dssp -------------HHHHHHHTC
T ss_pred -------------HHHHHHHHh
Confidence 999998765
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.92 E-value=9.7e-26 Score=189.29 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=109.6
Q ss_pred cccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHH
Q 048253 65 GELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILH 143 (323)
Q Consensus 65 ~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 143 (323)
+..+..|.||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+..|+.+++++|++..+.+++..|..|+||||
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~ 145 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHH
Confidence 334667889999999999999999999999888 7788888 99999999999999999998448889999999999999
Q ss_pred HHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccccccccccc
Q 048253 144 LCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNA 223 (323)
Q Consensus 144 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~ 223 (323)
+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..++. ++++.|++.+ ++.+..|.
T Consensus 146 ~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~-----------------~~l~~l~~~~-~~~~~~~~ 204 (222)
T 3ehr_A 146 AAAWKGYADIVQLLLAKGAR---TDLRNIEKKLAFDMATNAACA-----------------SLLKKKQGTD-AVRTLSNA 204 (222)
T ss_dssp HHHHHTCHHHHHHHHHHTCC---SCCCCTTSCCHHHHCCSHHHH-----------------HHHC---------------
T ss_pred HHHHcCCHHHHHHHHHcCCC---CccccCCCCCHHHHhcchhHH-----------------HHHHHHhccc-hhhhccch
Confidence 99999999999999999988 888999999999999998888 9999999887 67777766
Q ss_pred CC
Q 048253 224 NG 225 (323)
Q Consensus 224 ~g 225 (323)
+|
T Consensus 205 ~~ 206 (222)
T 3ehr_A 205 ED 206 (222)
T ss_dssp --
T ss_pred hh
Confidence 54
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=4e-25 Score=194.17 Aligned_cols=139 Identities=17% Similarity=0.123 Sum_probs=122.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccc------cCCCCCcHHHHHHhc---CCHHHHHHHHhcCCccccccCCCC-c
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGE------LDSNQFSALHIASQK---VHVDKIKALLQVNPAWCFAGDLDG-S 106 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~------~~~~g~tpL~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g-t 106 (323)
+.++||.|+..|+.+.++.|++.++++ +. .+..|+||||+|+.. |+.+++++|+++|+++ +.+|..| |
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~T 228 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 228 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCC
Confidence 346799999999999999999999987 55 689999999999997 8999999999999999 8889999 9
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcc
Q 048253 107 PLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKL 186 (323)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~ 186 (323)
|||+|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+.+++++|+++|++ .|.||||+|+..|+
T Consensus 229 pLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHH-TTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSCCC-------
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCChhHHHHhcCC
Confidence 9999999999999999999 8999999999999999999999999999999998754 57899999999886
Q ss_pred h
Q 048253 187 C 187 (323)
Q Consensus 187 ~ 187 (323)
.
T Consensus 299 ~ 299 (301)
T 2b0o_E 299 S 299 (301)
T ss_dssp -
T ss_pred c
Confidence 5
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=6e-25 Score=193.02 Aligned_cols=140 Identities=19% Similarity=0.086 Sum_probs=119.6
Q ss_pred cHHHHHHHhCCHHHHHHHhccCccccccc---cCCCCCCCHHHHHHHc---CCHHHHHHHHHhCCCcccccCCCCCcHHH
Q 048253 3 SMLYEAALKGCEPTLLELLQQDQLIIGRV---GVNCLSEFPLHAAALL---GHVDFEGEIRRQKPELAGELDSNQFSALH 76 (323)
Q Consensus 3 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~ 76 (323)
++|+.|+..|+.+.++.|++.+++++... ..+..|.||||+|+.. |+.+++++|+++++++ +.+|..|+||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCCHHH
Confidence 57999999999999999999998865420 1366799999999997 8999999999999998 899999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCch
Q 048253 77 IASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQL 151 (323)
Q Consensus 77 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~ 151 (323)
+|+..|+.+++++|+++|+++ +.+|..| ||||+|+..|+.+++++|++ .+++ .|.||||+|+..|+.
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL~~A~~~~~~~iv~~Ll~-~ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALV-GTVNEAGETALDIARKKHHKECEELLEQ-AQAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHHHHHHHHTCHHHHHHHHH-HHHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH-hcCC------CCCChhHHHHhcCCc
Confidence 999999999999999999999 8899999 99999999999999999999 3332 689999999998864
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.2e-24 Score=165.40 Aligned_cols=110 Identities=21% Similarity=0.252 Sum_probs=71.4
Q ss_pred CCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHH
Q 048253 103 LDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLA 181 (323)
Q Consensus 103 ~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 181 (323)
..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~tpL~~A 80 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD---INAPDKHHITPLLSA 80 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHHHH
Confidence 345 66666666666666666666 5556666666666666666666666666666666666 666666666666666
Q ss_pred HhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhh
Q 048253 182 VAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQ 234 (323)
Q Consensus 182 ~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~ 234 (323)
+..++. +++++|+++| ++++.+|.+|.||+++|..
T Consensus 81 ~~~~~~-----------------~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 81 VYEGHV-----------------SCVKLLLSKG-ADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp HHHTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHCCC
T ss_pred HHcCCH-----------------HHHHHHHHcC-CCCCCcCCCCCCHHHHhCC
Confidence 666666 6666666665 6666666666666666644
No 101
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1e-24 Score=165.81 Aligned_cols=115 Identities=15% Similarity=0.098 Sum_probs=88.7
Q ss_pred CCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHH
Q 048253 35 CLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAM 113 (323)
Q Consensus 35 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~ 113 (323)
..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++.|+++ +.++..| ||||+|+.
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~A~~ 82 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLSAVY 82 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHH
Confidence 44778888888888888888888888776 777888888888888888888888888888877 6777777 88888888
Q ss_pred hCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchh
Q 048253 114 KGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLD 152 (323)
Q Consensus 114 ~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~ 152 (323)
.|+.+++++|++ .+++++.+|.+|+||||+|...+..+
T Consensus 83 ~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 83 EGHVSCVKLLLS-KGADKTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCCCHHHHH
T ss_pred cCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhCCHHHHH
Confidence 888888888887 67777778888888888875444333
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=4e-25 Score=185.50 Aligned_cols=132 Identities=22% Similarity=0.186 Sum_probs=113.7
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhc-CCccccccCCCC-cHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQV-NPAWCFAGDLDG-SPLHLA 111 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g-t~L~~A 111 (323)
+..|.||||+|+..|+.+++++|++.+.++ +.+|..|+||||+|+..|+.+++++|++. |+++ +.++..| ||||+|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tpL~~A 147 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTALHAA 147 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCHHHHH
T ss_pred ccccccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCHHHHH
Confidence 345789999999999999999999999997 89999999999999999999999999999 8888 8899999 999999
Q ss_pred HHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCc
Q 048253 112 AMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLN 168 (323)
Q Consensus 112 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~ 168 (323)
+..|+.+++++|++ .+++++.+|..|+||||+|+..++.++++.|++.++.....+
T Consensus 148 ~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 148 AWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred HHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 99999999999999 689999999999999999999999999999999998743333
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.2e-23 Score=182.71 Aligned_cols=122 Identities=19% Similarity=0.204 Sum_probs=96.8
Q ss_pred CcHHHHHHhcCCHHHHHHHHhcCCccc-----cccCCCC-cHHHHHHHh---CCHHHHHHHHHhCCCcccccccccccHH
Q 048253 72 FSALHIASQKVHVDKIKALLQVNPAWC-----FAGDLDG-SPLHLAAMK---GRIDVLEELFRTRPLAASATMIWGETIL 142 (323)
Q Consensus 72 ~tpL~~A~~~g~~~~v~~Ll~~~~~~~-----~~~~~~g-t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L 142 (323)
.++|+.|++.|+.+.++.+++.|+++. ...+..| ||||+|+.. |+.+++++|++ .+++++.+|..|+|||
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~-~ga~in~~d~~g~TpL 209 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-NSGNLDKQTGKGSTAL 209 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-HCSCTTCCCTTCCCHH
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH-CCCCccccCCCCCCHH
Confidence 467888888888888888888887752 3336677 888888887 77888888888 5777888888888888
Q ss_pred HHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcc
Q 048253 143 HLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRT 214 (323)
Q Consensus 143 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g 214 (323)
|+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..|+. +++++|+++|
T Consensus 210 h~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~-----------------~~v~~Ll~~g 261 (278)
T 1dcq_A 210 HYCCLTDNAECLKLLLRGKAS---IEIANESGETPLDIAKRLKHE-----------------HCEELLTQAL 261 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC---CCCccCCCCCHHHHHHHcCCH-----------------HHHHHHHHcC
Confidence 888888888888888888877 788888888888888888888 8888888877
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.89 E-value=2e-23 Score=187.75 Aligned_cols=147 Identities=14% Similarity=0.064 Sum_probs=117.2
Q ss_pred CCCCHHHHHHHc-CCHHHHHHHHHhCCCcccccC--CCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHH
Q 048253 36 LSEFPLHAAALL-GHVDFEGEIRRQKPELAGELD--SNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLA 111 (323)
Q Consensus 36 ~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A 111 (323)
.+.|+||.|+.. |+.+++++|+++++++ +..+ ..|.||||+|+..|+.+++++|+++|+++ +.+|..| ||||+|
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~A 275 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHHA 275 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 356899999999 9999999999999998 7777 89999999999999999999999999999 8899999 999999
Q ss_pred HHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhc
Q 048253 112 AMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVK 185 (323)
Q Consensus 112 ~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~ 185 (323)
+..|+.+++++|++ .+++++..|.+|+||||+|+..++.+++++|++.+.........+..+.|+++++....
T Consensus 276 ~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 276 TILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------------------
T ss_pred HHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99999999999999 78999999999999999999999999999999887554445566778889998876554
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=1.8e-22 Score=189.29 Aligned_cols=135 Identities=19% Similarity=0.150 Sum_probs=111.4
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCccccc------CCCCCcHHHHHHh---cCCHHHHHHHHhcCCccccccCCCC-c
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGEL------DSNQFSALHIASQ---KVHVDKIKALLQVNPAWCFAGDLDG-S 106 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~g~tpL~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g-t 106 (323)
..+.||.|+..|+.++++.|+++|+++ +.+ |..|+||||+|++ .|+.+++++|+++|+++ +.+|..| |
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 346799999999999999999999887 655 7889999999966 88999999999999998 8888999 9
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHh
Q 048253 107 PLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVA 183 (323)
Q Consensus 107 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~ 183 (323)
|||+|+..|+.+++++|++ .+++++..|..|+||||+|+..|+.+++++|+++|++ ++. +|+|.+..
T Consensus 210 pLh~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~~~------~~~h~~~~ 276 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLK-GRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---TFA------FPLHVDYS 276 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHH-TCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---------------------
T ss_pred HHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC---CCC------Ccceeecc
Confidence 9999999999999999999 7899999999999999999999999999999999988 554 46665543
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=1.9e-22 Score=175.11 Aligned_cols=185 Identities=17% Similarity=0.149 Sum_probs=139.4
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc-ccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKPELAG-ELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHL 110 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~-~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~ 110 (323)
.|..+.+.|+.+...|+..+.+++-..-+.... .++. +....+ ....-..+++...-........... ++|+.
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~-~s~~~~----~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~ 136 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNP-GSDMIA----RKDYITAKYMERRYARKKHADTAAKLHSLCE 136 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCT-TCCHHH----HHHHHHHHHTTCTTSCCCSSSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCC-CCCHHH----HHHHHHHHHHHhhcccccccccchhhhhhhh
Confidence 466788899999999988777765443222100 1111 111111 1111122333332222212222234 78999
Q ss_pred HHHhCCHHHHHHHHHhCCCc------ccccccccccHHHHHHhh---CchhHHHHHHhCCCCCCCCcccccCCCcHHHHH
Q 048253 111 AAMKGRIDVLEELFRTRPLA------ASATMIWGETILHLCVKH---NQLDALKFLLDNMDDPQFLNAEDDYGMTITQLA 181 (323)
Q Consensus 111 A~~~g~~~~v~~Ll~~~~~~------~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A 181 (323)
|+..|+.+.++.+++ .+.+ ++..|..|+||||+|+.. |+.+++++|+++|++ +|.+|..|+||||+|
T Consensus 137 a~~~~d~~~~~~ll~-~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~---in~~d~~g~TpLh~A 212 (278)
T 1dcq_A 137 AVKTRDIFGLLQAYA-DGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGN---LDKQTGKGSTALHYC 212 (278)
T ss_dssp HHHTTCHHHHHHHHH-TTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSC---TTCCCTTCCCHHHHH
T ss_pred HhhhcccHHHHHHHH-hhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCC---ccccCCCCCCHHHHH
Confidence 999999999999999 5655 444588999999999999 899999999999999 999999999999999
Q ss_pred HhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 182 VAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 182 ~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
+..|+. +++++|+++| ++++.+|.+|.||||+|++ .++.+++++|
T Consensus 213 ~~~g~~-----------------~~v~~Ll~~g-ad~~~~d~~g~tpL~~A~~----~~~~~~v~~L 257 (278)
T 1dcq_A 213 CLTDNA-----------------ECLKLLLRGK-ASIEIANESGETPLDIAKR----LKHEHCEELL 257 (278)
T ss_dssp HHTTCH-----------------HHHHHHHHTT-CCTTCCCTTSCCHHHHHHH----TTCHHHHHHH
T ss_pred HHcCCH-----------------HHHHHHHHcC-CCCCCccCCCCCHHHHHHH----cCCHHHHHHH
Confidence 999999 9999999998 9999999999999999999 9999999998
No 107
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=1.2e-22 Score=182.72 Aligned_cols=145 Identities=18% Similarity=0.106 Sum_probs=117.3
Q ss_pred CCCCCcHHHHHHhc-CCHHHHHHHHhcCCccccccC--CCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHH
Q 048253 68 DSNQFSALHIASQK-VHVDKIKALLQVNPAWCFAGD--LDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILH 143 (323)
Q Consensus 68 ~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~~~~~~~~--~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh 143 (323)
+..+.||||.|+.. |+.+++++|++.|+++ +..+ ..| ||||+|+..|+.+++++|++ .+++++..|..|+||||
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~-~Gadvn~~d~~G~TpLh 273 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQ-NGANVNQADSAGRGPLH 273 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHH-cCCCCCCCCCCCCCHHH
Confidence 34566899999999 9999999999999999 6666 788 99999999999999999999 79999999999999999
Q ss_pred HHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhccc--cccccc
Q 048253 144 LCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTM--IEVNAL 221 (323)
Q Consensus 144 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~--~~~~~~ 221 (323)
+|+..|+.+++++|+++|++ ++.+|.+|.||||+|+..++. +++++|+..+. .+....
T Consensus 274 ~A~~~g~~~~v~~LL~~Gad---~~~~d~~G~TpL~~A~~~g~~-----------------~iv~lLl~~~~~~~~~~~~ 333 (368)
T 3jue_A 274 HATILGHTGLACLFLKRGAD---LGARDSEGRDPLTIAMETANA-----------------DIVTLLRLAKMREAEAAQG 333 (368)
T ss_dssp HHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH-----------------HHHHHHHHHHC--------
T ss_pred HHHHcCcHHHHHHHHHCcCC---CCCcCCCCCCHHHHHHHCCCH-----------------HHHHHHHHcCCCccccccc
Confidence 99999999999999999999 999999999999999999999 99999997652 334455
Q ss_pred ccCCCchhhhhhh
Q 048253 222 NANGFMALDTLAQ 234 (323)
Q Consensus 222 d~~g~tpl~~A~~ 234 (323)
+..+.|+++++..
T Consensus 334 ~~~~~t~l~i~~~ 346 (368)
T 3jue_A 334 QAGDETYLDIFRD 346 (368)
T ss_dssp -------------
T ss_pred CCCCCCHHHHHHH
Confidence 7778899888776
No 108
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=3.2e-22 Score=144.18 Aligned_cols=91 Identities=24% Similarity=0.277 Sum_probs=47.4
Q ss_pred CCcHHHHHHHhCCHHHHHHHhccCccccccccCCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHh
Q 048253 1 MKSMLYEAALKGCEPTLLELLQQDQLIIGRVGVNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQ 80 (323)
Q Consensus 1 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~ 80 (323)
|+||||.|+..|+.+++++|++.+++++. +|..|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|++
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~---~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~ 77 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNA---KDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAAR 77 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHH
Confidence 44555555555555555555555544322 2444555555555555555555555555554 4555555555555555
Q ss_pred cCCHHHHHHHHhcCC
Q 048253 81 KVHVDKIKALLQVNP 95 (323)
Q Consensus 81 ~g~~~~v~~Ll~~~~ 95 (323)
.|+.+++++|+++|+
T Consensus 78 ~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 78 NGHLEVVKLLLEAGA 92 (93)
T ss_dssp TTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHcCC
Confidence 555555555555544
No 109
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=2.4e-22 Score=188.50 Aligned_cols=135 Identities=18% Similarity=0.109 Sum_probs=116.4
Q ss_pred CCcHHHHHHhcCCHHHHHHHHhcCCcccccc------CCCC-cHHHHHHH---hCCHHHHHHHHHhCCCccccccccccc
Q 048253 71 QFSALHIASQKVHVDKIKALLQVNPAWCFAG------DLDG-SPLHLAAM---KGRIDVLEELFRTRPLAASATMIWGET 140 (323)
Q Consensus 71 g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~------~~~g-t~L~~A~~---~g~~~~v~~Ll~~~~~~~~~~~~~g~t 140 (323)
..+.||.|+..|+.++++.|++.|+++ +.+ +..| ||||+|+. .|+.+++++|++ .+++++..|..|+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~-~ga~vn~~d~~g~T 209 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-NGGHLDAKAADGNT 209 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH-HSCCTTCCCSSSCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH-cCCCCCccCCCCCc
Confidence 447899999999999999999999998 545 7789 99999976 899999999999 78999999999999
Q ss_pred HHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccc
Q 048253 141 ILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNA 220 (323)
Q Consensus 141 ~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~ 220 (323)
|||+|+..|+.+++++|+++|++ ++.+|.+|+||||+|+..|+. +++++|+++| ++++.
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~Ll~~g-a~~~~ 268 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHK-----------------ECEELLEQAQ-AGTFA 268 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHTCCC---CSCCCTTCCCHHHHHHHTTCH-----------------HHHHHHHHTC-C----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCH-----------------HHHHHHHHhC-CCCCC
Confidence 99999999999999999999999 999999999999999999999 9999999999 88876
Q ss_pred cccCCCchhhhhhh
Q 048253 221 LNANGFMALDTLAQ 234 (323)
Q Consensus 221 ~d~~g~tpl~~A~~ 234 (323)
. |+|.+..
T Consensus 269 ~------~~h~~~~ 276 (497)
T 3lvq_E 269 F------PLHVDYS 276 (497)
T ss_dssp --------------
T ss_pred C------cceeecc
Confidence 4 5555443
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=1.1e-21 Score=141.29 Aligned_cols=87 Identities=32% Similarity=0.503 Sum_probs=67.8
Q ss_pred CCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHHHhC
Q 048253 37 SEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAAMKG 115 (323)
Q Consensus 37 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~~~g 115 (323)
|+||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+..|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~~~~ 79 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNG 79 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcC
Confidence 778888888888888888888877776 777777888888888888888888888877777 6677777 7777777777
Q ss_pred CHHHHHHHHH
Q 048253 116 RIDVLEELFR 125 (323)
Q Consensus 116 ~~~~v~~Ll~ 125 (323)
+.+++++|++
T Consensus 80 ~~~~~~~Ll~ 89 (93)
T 1n0q_A 80 HLEVVKLLLE 89 (93)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7777777777
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=6.7e-22 Score=148.23 Aligned_cols=107 Identities=29% Similarity=0.368 Sum_probs=76.3
Q ss_pred cCCCC-cHHHHHHHhCCHHHHHHHHHhCCCcccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHH
Q 048253 101 GDLDG-SPLHLAAMKGRIDVLEELFRTRPLAASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQ 179 (323)
Q Consensus 101 ~~~~g-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh 179 (323)
+|..| ||||+|+..|+.+++++|++ .+.+++..|..|+||||+|+..++.+++++|+++|++ ++.+|..|.||||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~d~~g~tpl~ 80 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLS-KGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD---VNARSKDGNTPEH 80 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTT-TTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCC---TTCCCTTCCCTTH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CcccCCCCCCHHH
Confidence 55666 77777777777777777777 5666777777777777777777777777777777776 6777777777777
Q ss_pred HHHhhcchhhhHHHHHHHHhhcchHHHHHHHhhcccccccccccCCCchh
Q 048253 180 LAVAVKLCFQNLVELVEEYCHSKWGYVIRFLTTRTMIEVNALNANGFMAL 229 (323)
Q Consensus 180 ~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~tpl 229 (323)
+|+..++. +++++|+++| ++++.++..|.||-
T Consensus 81 ~A~~~~~~-----------------~~~~~Ll~~g-a~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 81 LAKKNGHH-----------------EIVKLLDAKG-ADVNARSWGSSHHH 112 (115)
T ss_dssp HHHTTTCH-----------------HHHHHHHTTS-SSHHHHSCCCC---
T ss_pred HHHHCCCH-----------------HHHHHHHHcC-CCCCcCCccccccc
Confidence 77777777 7777777776 77777777777663
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=8.8e-22 Score=147.57 Aligned_cols=105 Identities=23% Similarity=0.270 Sum_probs=56.1
Q ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHHH
Q 048253 34 NCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLAA 112 (323)
Q Consensus 34 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A~ 112 (323)
|.+|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|+
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPEHLAK 83 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTTHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHHHHHH
Confidence 444555555555555555555555555554 555555555555555555555555555555555 4445555 5555555
Q ss_pred HhCCHHHHHHHHHhCCCcccccccccccH
Q 048253 113 MKGRIDVLEELFRTRPLAASATMIWGETI 141 (323)
Q Consensus 113 ~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~ 141 (323)
..++.+++++|++ .+++++..+..|.+|
T Consensus 84 ~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDA-KGADVNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHT-TSSSHHHHSCCCC--
T ss_pred HCCCHHHHHHHHH-cCCCCCcCCcccccc
Confidence 5555555555555 455555555555444
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.78 E-value=7.4e-19 Score=130.61 Aligned_cols=89 Identities=24% Similarity=0.255 Sum_probs=74.4
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCCCcccccCCCCCcHHHHHHhcCCHHHHHHHHhcCCccccccCCCC-cHHHHH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKPELAGELDSNQFSALHIASQKVHVDKIKALLQVNPAWCFAGDLDG-SPLHLA 111 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g-t~L~~A 111 (323)
.|.+|.||||+|+..|+.+++++|+++++++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.++..| ||||+|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGKTAFDIS 97 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCCcHHHHH
Confidence 4566888888888888888888888888877 778888888888888888888888888888887 7778888 888888
Q ss_pred HHhCCHHHHHHH
Q 048253 112 AMKGRIDVLEEL 123 (323)
Q Consensus 112 ~~~g~~~~v~~L 123 (323)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 888888888876
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=7.4e-19 Score=130.60 Aligned_cols=92 Identities=22% Similarity=0.160 Sum_probs=57.6
Q ss_pred cccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhcchhhhHHHHHHHHhhcchHHHHHHHh
Q 048253 132 SATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVKLCFQNLVELVEEYCHSKWGYVIRFLT 211 (323)
Q Consensus 132 ~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~~~~~~~~~~l~~~~~~~~~~~v~~Ll 211 (323)
...|.+|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++. +++++|+
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---i~~~d~~g~tpLh~A~~~~~~-----------------~~v~~Ll 77 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGAD---VAAKDKNGSTPLHLAARNGHL-----------------EVVKLLL 77 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCH-----------------HHHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCH-----------------HHHHHHH
Confidence 34455666666666666666666666666665 666666666666666666666 6666666
Q ss_pred hcccccccccccCCCchhhhhhhccCCCchhhhHHHH
Q 048253 212 TRTMIEVNALNANGFMALDTLAQSKRDKKDWEIEDWK 248 (323)
Q Consensus 212 ~~g~~~~~~~d~~g~tpl~~A~~~~~~~~~~~i~~~L 248 (323)
++| ++++.+|..|.||+|+|+. .++.+++++|
T Consensus 78 ~~g-a~~~~~d~~g~tpl~~A~~----~~~~~~~~~L 109 (110)
T 2zgd_A 78 EAG-ADVXAQDKFGKTAFDISID----NGNEDLAEIL 109 (110)
T ss_dssp HTT-CCTTCCCTTSCCHHHHHHH----HTCHHHHHHH
T ss_pred HcC-CCccccccCCCcHHHHHHH----cCCHHHHHHh
Confidence 665 6666666666666666666 6666666655
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=55.42 E-value=24 Score=30.57 Aligned_cols=26 Identities=8% Similarity=0.268 Sum_probs=13.6
Q ss_pred cccccccHHHHHHhhCchhHHHHHHh
Q 048253 134 TMIWGETILHLCVKHNQLDALKFLLD 159 (323)
Q Consensus 134 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 159 (323)
.|..|+-.+......+..+..+.+++
T Consensus 213 ~d~~Gn~ViQ~~l~~~~~~~~~~i~~ 238 (351)
T 3gvo_A 213 QDQYGNYVIQHVLEHGRPEDKSKIVS 238 (351)
T ss_dssp TSTTHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHHhCchhhHHHHHH
Confidence 45555555555555555554444444
No 116
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=42.62 E-value=68 Score=28.41 Aligned_cols=53 Identities=9% Similarity=-0.016 Sum_probs=33.5
Q ss_pred HHHHHhCCHHHHHHHhccCcccccccc-----------CCCCCCCHHHHHHHcCCHHHHHHHHH
Q 048253 6 YEAALKGCEPTLLELLQQDQLIIGRVG-----------VNCLSEFPLHAAALLGHVDFEGEIRR 58 (323)
Q Consensus 6 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~-----------~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 58 (323)
+..+..|+...|+..+..+.+....-. .-..|.|.+|+|++..+-+++..|+.
T Consensus 27 c~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 456778999999999998877532211 01235666666666666666666664
No 117
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=41.89 E-value=49 Score=28.50 Aligned_cols=93 Identities=10% Similarity=0.102 Sum_probs=39.9
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhC--CCcccccCCCCCcHHHHHHhcCCHHHHHHHHhc--CCccccccCCCC-cH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQK--PELAGELDSNQFSALHIASQKVHVDKIKALLQV--NPAWCFAGDLDG-SP 107 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~--~~~~~~~~~~~g-t~ 107 (323)
.|..|+..+--....++.+....+++.- .-..-..+..|.-.+..+......+-...+++. +.-.....|..| ..
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el~~~~~~L~~d~~Gn~V 148 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKELDGHVLKCVKDQNGNHV 148 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHH
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHhhhhHHHHHHhhhhhHH
Confidence 3555666555555566555555554431 111112344454444444444443333333321 111112344555 55
Q ss_pred HHHHHHhCCHHHHHHHHH
Q 048253 108 LHLAAMKGRIDVLEELFR 125 (323)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~ 125 (323)
+......+..+..+.+++
T Consensus 149 iQk~l~~~~~~~~~~i~~ 166 (351)
T 3gvo_A 149 VQKCIECVQPQSLQFIID 166 (351)
T ss_dssp HHHHHHHSCGGGTHHHHH
T ss_pred HHHHHHhCCHHHHHHHHH
Confidence 555554444444444443
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=31.39 E-value=37 Score=18.79 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=11.7
Q ss_pred HHHHHhcCCHHHHHHHH
Q 048253 75 LHIASQKVHVDKIKALL 91 (323)
Q Consensus 75 L~~A~~~g~~~~v~~Ll 91 (323)
+..||+.|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777777776664
No 119
>3k49_A MRNA-binding protein PUF3; PUF3, pumilio, RNA binding, mitochondrial mRNA,, membrane, mitochondrion; HET: CIT; 2.50A {Saccharomyces cerevisiae} SCOP: a.118.1.0 PDB: 3k4e_A
Probab=24.98 E-value=58 Score=28.25 Aligned_cols=155 Identities=12% Similarity=0.114 Sum_probs=67.3
Q ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHhCC-Cc-ccccCCCCCcHHHHHHhcCCHHHHHHHHhc-CC-ccccccCCCC-cH
Q 048253 33 VNCLSEFPLHAAALLGHVDFEGEIRRQKP-EL-AGELDSNQFSALHIASQKVHVDKIKALLQV-NP-AWCFAGDLDG-SP 107 (323)
Q Consensus 33 ~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~-~~-~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~-~~-~~~~~~~~~g-t~ 107 (323)
.|.+|+..+.-....+..+..+.+++.-. .+ .-..+..|.-.+..+......+-...++.. .. -.....|..| ..
T Consensus 74 ~d~~gn~vvQkll~~~~~~~~~~i~~~~~g~~~~L~~~~~G~rVlQk~le~~~~~q~~~ii~el~~~~~~L~~d~~Gn~V 153 (369)
T 3k49_A 74 NDVFGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLELSDSVLQMIKDQNGNHV 153 (369)
T ss_dssp HSTTTHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHHSTTHHHHHHHHHHHSCHHHHHHHHGGGTTCHHHHHHSTTHHHH
T ss_pred hCcccccHHHHHHHhCCHHHHHHHHHHHhhhHHHHhcChhhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCcccchH
Confidence 35567666666666666655555554311 11 012344444444444444333332222221 11 1112345555 55
Q ss_pred HHHHHHhCCHHHHHHHHHhC-CCc-ccccccccccHHHHHHhhCchhHHHHHHhCCCCCCCCcccccCCCcHHHHHHhhc
Q 048253 108 LHLAAMKGRIDVLEELFRTR-PLA-ASATMIWGETILHLCVKHNQLDALKFLLDNMDDPQFLNAEDDYGMTITQLAVAVK 185 (323)
Q Consensus 108 L~~A~~~g~~~~v~~Ll~~~-~~~-~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t~Lh~A~~~~ 185 (323)
+......+..+..+.+++.- +.. --..+..|...+.-....+..+--+.+++.-.+....=..|..|+-.+..+...+
T Consensus 154 iQ~~l~~~~~~~~~~i~~~~~~~~~~ls~~~~Gs~Vvq~~l~~~~~~~~~~i~~~l~~~~~~L~~d~~GnyViQ~~l~~~ 233 (369)
T 3k49_A 154 IQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQD 233 (369)
T ss_dssp HHHHHHHSCGGGCHHHHHHHTTTHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHHTTTTCHHHHHHSTTHHHHHHHHHTCC
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHhCCCccCcHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhcC
Confidence 55555544433333333211 111 1122345555555555555554444444332111111225666776666666665
Q ss_pred ch
Q 048253 186 LC 187 (323)
Q Consensus 186 ~~ 187 (323)
..
T Consensus 234 ~~ 235 (369)
T 3k49_A 234 QF 235 (369)
T ss_dssp TT
T ss_pred Cc
Confidence 44
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=22.76 E-value=1.9e+02 Score=25.58 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=32.1
Q ss_pred HHHHcCCHHHHHHHHHhCCCccccc-------------CCCCCcHHHHHHhcCCHHHHHHHHh
Q 048253 43 AAALLGHVDFEGEIRRQKPELAGEL-------------DSNQFSALHIASQKVHVDKIKALLQ 92 (323)
Q Consensus 43 ~A~~~g~~~~v~~Ll~~~~~~~~~~-------------~~~g~tpL~~A~~~g~~~~v~~Ll~ 92 (323)
+.+..|+...|+..+..|.+..... -..|.|-+|+|++..+-+++..|+.
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 4456789999999998887762111 1335666666666666666666654
Done!