BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 048256
         (102 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9LLL8|XSP1_ARATH Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1
          Length = 749

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 7/102 (6%)

Query: 3   NFNYPSITV----PKLSGSITVTRRVKNVGSPGT-YQARVKTPQGVSVTIAPKSLKFINV 57
           + NYP+I +     K S      RRV NVG P + Y A V+ P+GV +T+ P+SL F   
Sbjct: 644 SLNYPTIQLTLRSAKTSTLAVFRRRVTNVGPPSSVYTATVRAPKGVEITVEPQSLSFSKA 703

Query: 58  GEEKSFKVIIKAKNASVTKDYVFGELIWSDEKQHQVRSPIVV 99
            +++SFKV++KAK  +  K  V G L+W   + H VRSPIV+
Sbjct: 704 SQKRSFKVVVKAKQMTPGK-IVSGLLVWKSPR-HSVRSPIVI 743


>sp|O64495|SDD1_ARATH Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2
           SV=1
          Length = 775

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/105 (40%), Positives = 58/105 (55%), Gaps = 8/105 (7%)

Query: 3   NFNYPSITVPKLSGSIT--VTRRVKNVGSPGT-YQARVKTPQGVSVTIAPKSLKFINVGE 59
           + NYPSI V    G  T  +TRRV NVGSP + Y   VK P+G+ V + PK L F +V +
Sbjct: 666 SLNYPSIAVIFKRGKTTEMITRRVTNVGSPNSIYSVNVKAPEGIKVIVNPKRLVFKHVDQ 725

Query: 60  EKSFKV--IIKAKN-ASVTKDYVFGELIW--SDEKQHQVRSPIVV 99
             S++V  ++K KN       +  G+L W  S     +VRSPI V
Sbjct: 726 TLSYRVWFVLKKKNRGGKVASFAQGQLTWVNSHNLMQRVRSPISV 770


>sp|O65351|SUBL_ARATH Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1
          Length = 757

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 1   LVNFNYPSITVP-KLSGSITVTRRVKNVGSPGTYQARVKT-PQGVSVTIAPKSLKFINVG 58
           + + NYPS  V     G+   TR V +VG  GTY  +V +   GV +++ P  L F    
Sbjct: 655 VADLNYPSFAVNVDGVGAYKYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEAN 714

Query: 59  EEKSFKVIIKAKNASVTKDYVFGELIWSDEKQHQVRSPIVV 99
           E+KS+ V     ++  +    FG + WSD K H V SP+ +
Sbjct: 715 EKKSYTVTFTVDSSKPSGSNSFGSIEWSDGK-HVVGSPVAI 754


>sp|Q39547|CUCM1_CUCME Cucumisin OS=Cucumis melo PE=1 SV=1
          Length = 731

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 3   NFNYPSITV---PKLSGSITVTRRVKNVG-SPGTYQARVKTPQGVSVTIAPKSLKFINVG 58
           + NYPS  +   P  + +    R + +V     TY+A +  PQG+++++ P  L F  +G
Sbjct: 631 DLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLG 690

Query: 59  EEKSFKVIIKAKNASVTKDYVFGELIWSDEKQHQVRSPIVVKAV 102
           + KSF + ++    S+    V   L+WSD   H VRSPI + ++
Sbjct: 691 DRKSFTLTVR---GSIKGFVVSASLVWSD-GVHYVRSPITITSL 730


>sp|Q492V1|SYFA_BLOPB Phenylalanine--tRNA ligase alpha subunit OS=Blochmannia
          pennsylvanicus (strain BPEN) GN=pheS PE=3 SV=1
          Length = 331

 Score = 28.9 bits (63), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 23 RVKNVGSPGTYQARVKTPQGVSVTIAPKSLKFINVGEEKSFKVIIKAKNASVTKD 77
          R+K +G  G     +K     S+ I PK    IN  +E  + ++I+ KN   +K+
Sbjct: 30 RIKFLGKKGYLNQHIKNLNDTSLDIKPKLGAAINQAKEDIYTLLIERKNILQSKN 84


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.315    0.131    0.365 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,820,033
Number of Sequences: 539616
Number of extensions: 1217027
Number of successful extensions: 3242
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3233
Number of HSP's gapped (non-prelim): 10
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 55 (25.8 bits)